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Homologs of unnamed gene of AY233333

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Pecwa_1600
( YP_003258997.1 )

DEAD/DEAH box helicase

NC_013421
(Pectobacterium wasabiae WPP163)

0.0

2) RPC_3053
( YP_532916.1 )

DEAD/DEAH box helicase-like protein

NC_007925
(Rhodopseudomonas palustris BisB18)

0.0

3) RPD_3630
( YP_570754.1 )

DEAD/DEAH box helicase-like protein

NC_007958
(Rhodopseudomonas palustris BisB5)

0.0

4) PT7_0573
( YP_004415737.1 )

DEAD/DEAH box helicase-like protein

NC_015458
(Pusillimonas sp. T7-7)

0.0

5) Mpe_A1672
( YP_001020869.1 )

superfamily II helicase-like protein

NC_008825
(Methylibium petroleiphilum PM1)

0.0

6) I633_15250
( YP_008193480.1 )

DEAD/DEAH box helicase-like protein

NC_021716
(Alteromonas macleodii English Channel 615)

0.0

7) Mesau_06001
( YP_007307596.1 )

superfamily II helicase

NC_019973
(Mesorhizobium australicum WSM2073)

0.0

8) Pnap_4384
( YP_973404.1 )

DEAD/DEAH box helicase domain-containing protein

NC_008757
(Polaromonas naphthalenivorans CJ2)

0.0

9) Rpdx1_0864
( YP_004107229.1 )

DEAD/DEAH box helicase

NC_014834
(Rhodopseudomonas palustris DX-1)

1e-151

10) helS
( YP_006575722.1 )

dead/deah box helicase domain protein

NC_018299
(Sinorhizobium fredii HH103)

4e-149

• Sequence Alignments

1) Pecwa_1600 in NC_013421


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score = 1177 bits (4465),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 699/963 (73%), Positives = 837/963 (87%), Gaps = 1/963 (0%)

Query  232   MTAMSLYILAIERGDRLYLTRAIEQLQSGLAVCSRFNMLPQWWVIFITIHLLSDLWSDTF  291
             M+A+SLY+LA+ERG+   L+RAIE+L+ +L++C++FNMLPQWW+ FITIHLLSDLWSDTF
Sbjct  1     MSAISLYLLAVERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTF  60

Query  292   HELLPLDTAGNEAEAWPELRELFIALLHQRPRAEVDLWPSQREAAVRAVNDADDLVVSLP  351
             HE LPL   G +A  WP LRELFIALL++RPRAE+DLWPSQREAA R+VND DDLVVSLP
Sbjct  61    HERLPLVPVGGDAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLP  120

Query  352   TSAGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFNPLGKTISALYGSIGV  411
             TSAGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTF PLGKTIS LYGSIGV
Sbjct  121   TSAGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIGV  180

Query  412   SGMDEDAIRLRDIVVATPEKLDFALRNDPGLINDVGLFIFDEGHMIGADEREVRYEVQIQ  471
             SGMDEDAIR RDIVVATPEKLDFALRNDP++INDVGLFIFDEGHMIGADEREVRYEVQIQ
Sbjct  181   SGMDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQ  240

Query  472   RLLRRSDANERRIVCLSAILPDGNQLDDFANWLRRDKPGGVVRNDWRPTSLRFGEVIWAG  531
             RLLRR DA+ RRIVCLSAILPDG+QLDDFA WLRRDKPGG ++N+WRPT L+FGEVIW++
Sbjct  241   RLLRRQDADTRRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWSA  300

Query  532   AAARLNLSVGEERPWVSRFLVSAEPPVVKLRGRKQRKKLFPGTSNELCLATAWRLVEDGQ  591
             +A+RLNLSVG E +WVSRF+VS +PP VKL  +KQR K+FP+ ++ELCLATAWRL+EDGQ
Sbjct  301   PAGRLNLSVGYEAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQ  360

Query  592   TVLIYCPLRKSVEPFADTIVDLNQRGLLRSLFEGEADVLDRAIALGEEWLGAQSPILTCL  651
             TVLIYCPLR+SVEPFA+TIVDL+QRGLL SLF++ +D+LD AI+LGEEWLGA+SPIL+CL
Sbjct  361   TVLIYCPLRRSVEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILACL  420

Query  652   RLGVALHHGALPTAYRKEIERLLRDGVLKVTVSSPTLAQGLNLSATVIVMHSLHRNGELI  711
             RLGVALHHGALPTAYRKEIERLLRDGVLKVT+SSPTLAQGLNLSAT IVMHSLHRN ELI
Sbjct  421   RLGVALHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRELI  480

Query  712   NVSEFRNVIGRAGRAYVDVEGLVIYPIFDEVGKRLGNWNKLTKDTGAREMQSGLVQLVIS  771
             +VSEFRNVIGRAGRAYVDVEGLVIYPIFD V KR  NW+ LT DTGAREM+SGL+QLV  
Sbjct  481   KVSEFRNVIGRAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDTGAREMESGLIQLVCV  540

Query  772   LLTRMSLQVSGDIDTLTDYVLNNARAWTFPIKTGENANERERAFTLWEKQIATLDTAILS  831
             LL RM  +++GD+ +LT+YV NNA AW FP    E+++ER+ A ++WEKQ++TLDTAILS
Sbjct  541   LLIRMHTRLGGDLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAIWEKQLSTLDTAILS  600

Query  832   LIGESDVPDDQIEDTLDDILHSSLWQRSLQRYPGDNIRGLIKSGLLSRSHHIWQNSTPAA  891
             L+GE+D+PDDQIE +LDDIL+SSLWQRSLQRY ++N R L+KSGLLSRS+ IWQ ST+A+
Sbjct  601   LLGENDIPDDQIETALDDILQSSLWQRSLQRYRDENERILLKSGLLSRSRYIWQRSTAAG  660

Query  892   RRGYFLSGVGLKTGQQLDSIAPEANRLLIEANAAIMRSDEEGAIAALTALASRVFTFYPF  951
             RRGYFLSGVGL TG +LD+IA+ AN+LLI+ANAAIM +D E AIAA+TALA  VFTFYPF
Sbjct  661   RRGYFLSGVGLTTGLRLDAIAAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFTFYPF  720

Query  952   TPDPLPDDWQAILHAWLSGKPTTAIADVVKTEILQFVENGLTYRLPWAMEAIRVRAIANG  1011
              PDPLP+DW++IL++WL G P T +A+   +E LQFVENGL YRLPWAMEAIRVRA ANG
Sbjct  721   IPDPLPGDWRGILRSWLLGEPMTNVANTQASETLQFVENGLVYRLPWAMEAIRVRATANG  780

Query  1012  DIVDDEGLTLDAFELGPAVAAVETGTLNRAASLLIQAGFNSRLAAIKAVKDSDADFISGR  1071
             D+++D + TLD +ELG AVAAVETGTL+R++SLLIQAGF+SRLAAIK V D+ ADF SG+
Sbjct  781   DLIGDTDTTLDDYELGFAVAAVETGTLSRSSSLLIQAGFSSRLAAIKVVTDTTADFQSGQ  840

Query  1072  GLREWLRSDLIVAWGELPDWPTPETHRMWIDFTRVTNPADDQTWSLRRYTGTVKWIGAIP  1131
              LR WL S+ +++  +  DWPTPET+ MW++F    +P + Q WS +RY G V W ++ +
Sbjct  841   ELRRWLNSEEVISHTDNHDWPTPETRVMWLEFLGSLSPKGSQVWSRHRYNGMVDWRDTPA  900

Query  1132  QPLTPLHFYQLDGVNYLLAEDGRPLASITGAINTKRKGLMRVTVGNQSNIEV-DYLGPDD  1190
                TPL++Y +DG++ +LA+DG PL+SI G INT+R+GL+RV V++++   + DYLGPDD
Sbjct  901   VIGTPLQLYTVDGIHHVLADDGTPLGSINGRINTNRRGLLRVEVDDENGRAMFDYLGPDD  960

Query  1191  IAA  1193
             + +
Sbjct  961   FIS  963

2) RPC_3053 in NC_007925


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score = 1016 bits (3852),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 633/951 (67%), Positives = 797/951 (84%), Gaps = 3/951 (0%)

Query  222   DRGERALVDQAIAQLRESLEICAELNLLPQWWVHRVAIHLLSDLWSNTFHEKVPLLPAGG  281
             +RGE  L+ +AI +LR SL ICA++N+LPQWW++ ++IHLLSDLWS+TFHE++PL+P GG
Sbjct  12    ERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTFHERLPLVPVGG  71

Query  282   AAPSWPGLRELFIALLARRPRAEVDLWPSQTEAASRAVDQTDNLVVSLPTSAGKTRIAEL  341
              A+ WP+LRELFIALL RRPRAE+DLWPSQ EAA+R+V++ D+LVVSLPTSAGKTRIAEL
Sbjct  72    DAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLPTSAGKTRIAEL  131

Query  342   SILRCLAGGRRVMFVTPLRALSAQTETTLQRTFGPLGKTISALYGSIGVSGFDEDAIRER  401
              ILRCLAGG+RV+F+TPLRALSAQTE+TL RTFGPLGKTIS LYGSIGVSG DEDAIR+R
Sbjct  132   CILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIGVSGMDEDAIRQR  191

Query  402   DIVVATPEKLDFALRNDPSLLDDVGLLVFDEGHMIGPGEREVRYEVqiqrllrrqdadqr  461
             DIVVATPEKLDFALRNDPS+++DVGL++FDEGHMIG++EREVRYEVQIQRLLRRQDAD R
Sbjct  192   DIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQRLLRRQDADTR  251

Query  462   riVCLSAILPDGDQLEDFSAWLRRDQPGGPIKHDWRPTRLRFGEVTWNSPTARLNLRVGE  521
             RIVCLSAILPDG+QL+DF++WLRRD+PGGPIK++WRPTRL+FGEV W++P++RLNL VG 
Sbjct  252   RIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWSAPAGRLNLSVGY  311

Query  522   EKPFVPRFLTGAAPP-LFVPPKKLRTRLFPDNQQELSLATAWRLVSDGQTVLIYCPERRS  580
             E + V+RF+ +  PP + +P KK RT++FP +++EL LATAWRL+ DGQTVLIYCP RRS
Sbjct  312   EAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQTVLIYCPLRRS  371

Query  581   VEPFAKVIVELHSRGALASLLTVNPATLQTAIALGEEWLGPDSDILKCLRLGVALHHGAL  640
             VEPFA  IV+LH RG L+SL+   P  L+TAI+LGEEWLG++S IL CLRLGVALHHGAL
Sbjct  372   VEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILACLRLGVALHHGAL  431

Query  641   PTAYRKEVERLLRDGVLKVTISSPTLAQGLNLSATAVVMHSLYRHGEKIKVSEFKNVIGR  700
             PTAYRKE+ERLLRDGVLKVTISSPTLAQGLNLSATA+VMHSL R+ E IKVSEF+NVIGR
Sbjct  432   PTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRELIKVSEFRNVIGR  491

Query  701   AGRAYVDVEGLVLYPIFEDAKNRKLNEWIELIEDLGAREMESGLIQLIFSLLKRMHARLG  760
             AGRAYVDVEGLV+YPIF+  ++R+  +W  L  D GAREMESGLIQL+  LL RMH+RLG
Sbjct  492   AGRAYVDVEGLVIYPIFDKVNKRQ-TNWHTLTSDTGAREMESGLIQLVCVLLIRMHTRLG  550

Query  761   GNLDQLIDYVVNNAAAWTFPEVAGEKPDKRERALNEWERHMATLDTAILSLIGEADVPDD  820
             G+L  L +YV NNA AW FPE+  E P+ R+ A   WE++++TLDTAILSL+GE D+PDD
Sbjct  551   GDLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAIWEKQLSTLDTAILSLLGENDIPDD  610

Query  821   QIETALDNIlqssl-wqrrllrVDDASRAAYRAALLTRSRYIWANSTAATRRGYFlaglg  879
             QIETALD+ILQSSL  +      D+  R   +++LL+RSRYIW  STAA RRGYFL+G+G
Sbjct  611   QIETALDDILQSSLWQRSLQRYRDENERILLKSGLLSRSRYIWQRSTAAGRRGYFLSGVG  670

Query  880   leaghaldaVAAEANDLLVQANAALMVSDHEaaiaaitgiaERVFAFYPFEPDPFPVNWR  939
             L +G  LDA+AA AN+LL++ANAA+M +D E AIAAIT++AE VF+FYPF PDP+P +WR
Sbjct  671   LTTGLRLDAIAAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFTFYPFIPDPLPGDWR  730

Query  940   DILRCWLLGQPLAATVAGQEGEALQFIEGGLVYRLPWAMEALRVRAAANGDVVGVFGLAL  999
             +ILR WLLG+P++     Q +E+LQF+E GLVYRLPWAMEA+RVRA+ANGD++G  + +L
Sbjct  731   GILRSWLLGEPMTNVANTQASETLQFVENGLVYRLPWAMEAIRVRATANGDLIGDTDTTL  790

Query  1000  GDYELGLAVPAVETGTINRSASILIQAGFNSRLAAIKIITDTGATFTSGAELRAWLRTPG  1059
             +DYELG+AV+AVETGT++RS+S+LIQAGF+SRLAAIK++TDT A F SG ELR WL +  
Sbjct  791   DDYELGFAVAAVETGTLSRSSSLLIQAGFSSRLAAIKVVTDTTADFQSGQELRRWLNSEE  850

Query  1060  VAIWSAEPDWPTAETRAMWLEFIREFAPADNRTWARRDYLGNVQWFAAPAPPGTPVNLCH  1119
             V   + + DWPT+ETR MWLEF+  ++P +++ W+R+ Y G V+W  +PA  GTP++L  
Sbjct  851   VISHTDNHDWPTPETRVMWLEFLGSLSPKGSQVWSRHRYNGMVDWRDTPAVIGTPLQLYT  910

Query  1120  RNGQPLVLAPDGRAIGLLQHPLNSNRRGLVRANVSQNVAHLDLSYLGPDDL  1170
              +G   VLA DG ++G ++  +N+NRRGL+R +V ++ ++  + YLGPDD+
Sbjct  911   VDGIHHVLADDGTPLGSINGRINTNRRGLLRVEVDDENGRAMFDYLGPDDF  961

3) RPD_3630 in NC_007958


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score = 1015 bits (3847),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 636/966 (66%), Positives = 826/966 (86%), Gaps = 4/966 (0%)

Query  210   LSAISMFVLALDRGDRSLVDQALARLRENLSICSELNLLPQWWAHRLAIHLLSDLWSNTF  269
             +SAIS+++LA++RG+  L+ +A+ +LR +LSIC+++N+LPQWW + ++IHLLSDLWS+TF
Sbjct  1     MSAISLYLLAVERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTF  60

Query  270   HERVPRQPTGGEAADWPRLRQLFIALLQRRPKAEIDLWPSQLEAAERAVDQGDDLVVSLP  329
             HER+P  P GG+AA+WP LR+LFIALLQRRP+AEIDLWPSQ EAA R+V++ DDLVVSLP
Sbjct  61    HERLPLVPVGGDAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLP  120

Query  330   TSAGKTRIAELCILRCLAGGKRVVFVTPLRALSAQTETTLQRTFGPLGKTISALYGSIGV  389
             TSAGKTRIAELCILRCLAGGKRVVF+TPLRALSAQTE+TL RTFGPLGKTIS LYGSIGV
Sbjct  121   TSAGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIGV  180

Query  390   SGFDEDAIRERDIVVSTPEKLDFALRNDPSLLDDVGLLVFDEGHMIGPNEREIRYEVQIQ  449
             SG DEDAIR+RDIVV+TPEKLDFALRNDPS+++DVGL++FDEGHMIG++ERE+RYEVQIQ
Sbjct  181   SGMDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQ  240

Query  450   rllrrrdaharrIVCLSAILPDGDQLDDFAAWLRRDHPGGLIKNDWRPTRLRFGEVIWTP  509
             RLLRR+DA++RRIVCLSAILPDG+QLDDFA+WLRRD PGG IKN+WRPTRL+FGEVIW+ 
Sbjct  241   RLLRRQDADTRRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWS-  299

Query  510   ASASARLNLRVGDERPWVQRFLTGAAPP-LFIPPKRLRTKVFPGNQRELCLATAWRLVED  568
              ++++RLNL VG E +WV RF+ +  PP + +P K+ RTK+FP++++ELCLATAWRL+ED
Sbjct  300   -APAGRLNLSVGYEAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIED  358

Query  569   GQTVLIFCPERRGVEPFADVVVDLHERGALRSLLEVDPGVLSTAITLGEEWLGHDSAILK  628
             GQTVLI+CP RR+VEPFA+ +VDLH+RG L SL++  P++L TAI+LGEEWLG +S+IL 
Sbjct  359   GQTVLIYCPLRRSVEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILA  418

Query  629   CLRLGVALHHGALPTAYRKEVEQLLRANVLKVTVSSPTLAQGLNLSATAVVMFSLHRAGE  688
             CLRLGVALHHGALPTAYRKE+E+LLR  VLKVT+SSPTLAQGLNLSATA+VM SLHR  E
Sbjct  419   CLRLGVALHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRE  478

Query  689   LIEISEFKNVIGRAGRAYVDVEGIVLFPMFDEIVKKRRSWEALITDLGAREMESGLVRLV  748
             LI +SEF+NVIGRAGRAYVDVEG+V++P+FD + K++ +W++L +D GAREMESGL++LV
Sbjct  479   LIKVSEFRNVIGRAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDTGAREMESGLIQLV  538

Query  749   SALLLRMRARVGGDLNQLIEYVVNSAAAWVFPEVQNETPKDRERALADWNRHVATLDTAI  808
               LL+RM++R+GGDL+ L EYV N+A AW FPE+  E+P++R+ A A W+++++TLDTAI
Sbjct  539   CVLLIRMHTRLGGDLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAIWEKQLSTLDTAI  598

Query  809   LSLIGENEIADHEVEAALDHILQSSLWHRRLLR-QNDQVRHLLKAGLLSRSRLIWSQSTS  867
             LSL+GEN+I+D+++E+ALD+ILQSSLW+R L R ++++ R LLK+GLLSRSR IW +ST+
Sbjct  599   LSLLGENDIPDDQIETALDDILQSSLWQRSLQRYRDENERILLKSGLLSRSRYIWQRSTA  658

Query  868   TRRRGYFLAGVGLTTgqaldaiaadanllllqanagigagdagaaidaVTRLAELVFTFY  927
             + RRGYFL+GVGLTTG  LDAIAA AN LL++ANA+I +GDA  AI A+T LAE VFTFY
Sbjct  659   AGRRGYFLSGVGLTTGLRLDAIAAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFTFY  718

Query  928   PFTPDPWPGNWRDILRSWllgqplgalaagqaSDTLQFIEGSLVYRLPWAMEAVRVRAAA  987
             PF PDP PG+WR+ILRSWLLG+P+  +A  QAS+TLQF+E +LVYRLPWAMEA+RVRA+A
Sbjct  719   PFIPDPLPGDWRGILRSWLLGEPMTNVANTQASETLQFVENGLVYRLPWAMEAIRVRATA  778

Query  988   NGDTVGLFGLTLEDHELSLAVLSVETGTMNRSASILIQAGFTSRLAAIKAVTDSGATFQN  1047
             NGD +G  + TL+D EL++AV +VETGT++RS+S+LIQAGF+SRLAAIK VTD+ A FQ+
Sbjct  779   NGDLIGDTDTTLDDYELGFAVAAVETGTLSRSSSLLIQAGFSSRLAAIKVVTDTTADFQS  838

Query  1048  GGQLRAWLSSEALAAWNALPDWPTAETKAMWTEFTQGFTPRASNIWSDRRYWASATWYgv  1107
             G +LR WL+SE + +     DWPT+ET+ MW EF  +++P++S++WS +RY +   W + 
Sbjct  839   GQELRRWLNSEEVISHTDNHDWPTPETRVMWLEFLGSLSPKGSQVWSRHRYNGMVDWRDT  898

Query  1108  pplpgvpvQLHDWNGQRLVLSADCTPLGTLRNALNANRKGLIQATVSPTAGRIDLVYIGP  1167
             P++ G P+QL   +G + VL+ D TPLG++   +N+NR+GL++  V    GR  + Y+GP
Sbjct  899   PAVIGTPLQLYTVDGIHHVLADDGTPLGSINGRINTNRRGLLRVEVDDENGRAMFDYLGP  958

Query  1168  DDLSAT  1173
             DD+ +T
Sbjct  959   DDFIST  964

4) PT7_0573 in NC_015458


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score = 1006 bits (3811),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 629/961 (66%), Positives = 799/961 (84%), Gaps = 3/961 (0%)

Query  65    GAFSMFLLALDRGEHALLDRAIAQLRENLDICGELNLLPQWWVHRIAIHLLSDLWSNTFH  124
             +A+S++LLA++RGE  LL RAI +LR +L IC+++N+LPQWW++ I+IHLLSDLWS+TFH
Sbjct  2     SAISLYLLAVERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTFH  61

Query  125   EKIPLLPAGGAAPSWPSLRELFIALLARRPRAEVDLWPSQTEAASRAVDQTDNLVVSLPT  184
             E++PL+P GG A+ WP+LRELFIALL RRPRAE+DLWPSQ EAA+R+V++ D+LVVSLPT
Sbjct  62    ERLPLVPVGGDAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLPT  121

Query  185   SAGKTRIAELSILRCLAGGRRVIFVTPLRALSAQTENTLQRTFGPLGKTISALYGSIGVS  244
             SAGKTRIAEL ILRCLAGG+RV+F+TPLRALSAQTE TL RTFGPLGKTIS LYGSIGVS
Sbjct  122   SAGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIGVS  181

Query  245   GFDEDAIRERDIVVATPEKLDFALRSDPSLLDDVGLLVFDEGHMIGPGEREVRYEVqiqr  304
             G DEDAIR+RDIVVATPEKLDFALR+DPS+++DVGL++FDEGHMIG++EREVRYEVQIQR
Sbjct  182   GMDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQR  241

Query  305   llrrqdadqrriVCLSAILPDGDQMEDFSAWLRRDQLGSPIKNDWRPTRLRFGEVTWNAP  364
             LLRRQDAD RRIVCLSAILPDG+Q++DF++WLRRD+ G+PIKN+WRPTRL+FGEV W+AP
Sbjct  242   LLRRQDADTRRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWSAP  301

Query  365   TARLNLRVGEERPFVPRFLTGTAPP-LFVPPKRLRTRLFPDNQQELSLATAWRLVSDGQT  423
             ++RLNL VG E + V+RF+ +  PP + +P K+ RT++FP +++EL LATAWRL+ DGQT
Sbjct  302   AGRLNLSVGYEAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQT  361

Query  424   VLIYCPERRSVEPFAKVIVDLHSRGALVSLLTVDPATLQTAVALGEEWLGPDSDILKCLQ  483
             VLIYCP RRSVEPFA  IVDLH RG L SL+   P  L+TA++LGEEWLG++S IL CL+
Sbjct  362   VLIYCPLRRSVEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILACLR  421

Query  484   LGVALHHGALPTAYRKEVERLLRDGVLKITISSPTLAQGLNLSATAVVMHSLYRHGEKIK  543
             LGVALHHGALPTAYRKE+ERLLRDGVLK+TISSPTLAQGLNLSATA+VMHSL R+ E IK
Sbjct  422   LGVALHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRELIK  481

Query  544   VSEFKNVIGRAGRAYVDVEGLVLYPIFEDARNRKHDNWVELIQDLGAREMESGLIQLIFS  603
             VSEF+NVIGRAGRAYVDVEGLV+YPIF+   N+++ NW  L  D GAREMESGLIQL+  
Sbjct  482   VSEFRNVIGRAGRAYVDVEGLVIYPIFDKV-NKRQTNWHTLTSDTGAREMESGLIQLVCV  540

Query  604   LLSRMHARLGGNLDQLIDYVVNNAAAWTFPEVAGEEADKRERALKEWERNMATLDTAILS  663
             LL RMH+RLGG+L  L +YV NNA AW FPE+  E ++ R+ A   WE++++TLDTAILS
Sbjct  541   LLIRMHTRLGGDLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAIWEKQLSTLDTAILS  600

Query  664   LIGEADVPDDQIEAALDNIlqssl-wqrrllrvddalraayrTTLLTRSRHIWMNSTAAT  722
             L+GE D+PDDQIE+ALD+ILQSSL  +      D+  R   ++ LL+RSR IW  STAA 
Sbjct  601   LLGENDIPDDQIETALDDILQSSLWQRSLQRYRDENERILLKSGLLSRSRYIWQRSTAAG  660

Query  723   RRGYFlaglgleaghaldaIAPEANDLLIQANAALMASDHESAIAAITGIAERVFAFYPF  782
             RRGYFL+G+GL +G  LDAIA+ AN+LLI+ANAA+M++D E AIAAIT++AE VF+FYPF
Sbjct  661   RRGYFLSGVGLTTGLRLDAIAAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFTFYPF  720

Query  783   EPDPLPANWRQVLRCWLLGQPLAAIIAGEEADALQFIEGGLVYRLPWAMEALRVRAAANG  842
              PDPLP++WR +LR WLLG+P++ +   + +++LQF+E GLVYRLPWAMEA+RVRA+ANG
Sbjct  721   IPDPLPGDWRGILRSWLLGEPMTNVANTQASETLQFVENGLVYRLPWAMEAIRVRATANG  780

Query  843   DVVGMFAQALDDYELGLAVQAVETGTMNRSASILIQAGFNSRLAAIKAVTDTAATFRTGA  902
             D++G    +LDDYELG+AV AVETGT++RS+S+LIQAGF+SRLAAIK VTDT+A F++G 
Sbjct  781   DLIGDTDTTLDDYELGFAVAAVETGTLSRSSSLLIQAGFSSRLAAIKVVTDTTADFQSGQ  840

Query  903   ELRDWLRSPGLAAWSAQPNWPTAETRAIWLAFIQEFAPSDNLTWARRDYLGNVQWFAVPA  962
             ELR WL S  + + + + +WPT+ETR +WL F+  ++P ++  W+R+ Y G V+W   PA
Sbjct  841   ELRRWLNSEEVISHTDNHDWPTPETRVMWLEFLGSLSPKGSQVWSRHRYNGMVDWRDTPA  900

Query  963   PPGTPVSLFHWNGQPLVLAPDGHAIGLLQHPLNPNWRGVVRATVAMNNGQLDLSYLGPDD  1022
               GTP+ L+  +G   VLA DG ++G ++  +N N+RG++R  V  +NG+  + YLGPDD
Sbjct  901   VIGTPLQLYTVDGIHHVLADDGTPLGSINGRINTNRRGLLRVEVDDENGRAMFDYLGPDD  960

Query  1023  L  1023
             +
Sbjct  961   F  961

5) Bxe_A1793 in NC_007951


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score =  939 bits (3557),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 580/881 (66%), Positives = 739/881 (84%), Gaps = 3/881 (0%)

Query  1    MFIASLGCRPKAEVDLWPSQILAATRAVDQTDNLVVSLPTSAGKTRIAELCILRCLAANR  60
            +FIA L  RP+AE+DLWPSQ  AA R+V++ D+LVVSLPTSAGKTRIAELCILRCLA+ +
Sbjct  82   LFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLPTSAGKTRIAELCILRCLAGGK  141

Query  61   RVIFVTPLRALSAQTESTLQRTFCPLGKTISALYGSIGVSGFDEDAIRGRNIVVATPEKL  120
            RV+F+TPLRALSAQTE+TL RTF PLGKTIS LYGSIGVSG DEDAIR R+IVVATPEKL
Sbjct  142  RVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIGVSGMDEDAIRQRDIVVATPEKL  201

Query  121  DFALRNDPSLLDDVGLLVFDEGHMIGPGEREVRYEVQIQRLLRRPDADQRRIVCLSAILP  180
            DFALRNDPS+++DVGL++FDEGHMIG++EREVRYEVQIQRLLRR DAD RRIVCLSAILP
Sbjct  202  DFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQRLLRRQDADTRRIVCLSAILP  261

Query  181  DGDQLEDFSAWLRRDHPGGPIKHDWRPTRLRFGEVIWNSPTARLNLRVGEERPFVPRFLT  240
            DG+QL+DF++WLRRD PGGPIK++WRPTRL+FGEVIW++P++RLNL VG E + V+RF+ 
Sbjct  262  DGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWSAPAGRLNLSVGYEAAWVSRFIV  321

Query  241  GVAPP-LFVRPKRRRTRPFPNDQQELSIATAWRLVDDGQTVLIYCPQRRSVEPFAEAIVD  299
            +  PP + +  K++RT+ FP+D++EL +ATAWRL++DGQTVLIYCP RRSVEPFAE+IVD
Sbjct  322  SRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQTVLIYCPLRRSVEPFAETIVD  381

Query  300  LHERGALRSLLTDAPAVLQTAIALGEEWLGVESNILKCLRLGVALHHGALPTAYRKEVER  359
            LH+RG L SL+  AP +L+TAI+LGEEWLG +S IL CLRLGVALHHGALPTAYRKE+ER
Sbjct  382  LHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILACLRLGVALHHGALPTAYRKEIER  441

Query  360  LLRDGVLKVTISSPTLAQGLNLSATVIVMHSLYRNGERIKVSEFKNVIGRAGRAYVDVEG  419
            LLRDGVLKVTISSPTLAQGLNLSAT IVMHSL RN E IKVSEF+NVIGRAGRAYVDVEG
Sbjct  442  LLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRELIKVSEFRNVIGRAGRAYVDVEG  501

Query  420  LVLFPIFEDVRNKKHNDWVELIEDLGAREMESGLIQLIVGLLVRMHARVGGDLNNLMEYV  479
            LV++PIF+ V NK++ +W  L  D GAREMESGLIQL+  LL+RMH+R+GGDL+ L EYV
Sbjct  502  LVIYPIFDKV-NKRQTNWHTLTSDTGAREMESGLIQLVCVLLIRMHTRLGGDLKALTEYV  560

Query  480  VNNAEAWTFPEVIGERADKRDRALKEWERNLPTLDTAILGLIGDIDVPDDGIEAALDAAL  539
             NNA AW FPE++ E ++ RD A   WE++L+TLDTAIL+L+G+ D+PDD IE+ALD  L
Sbjct  561  TNNAVAWEFPEIMTESPQERDIAQAIWEKQLSTLDTAILSLLGENDIPDDQIETALDDIL  620

Query  540  QSSLWQRRLVR-QDAANQQAFRTTLLTRSRYIWARSTPAARRGYFlaglgleagraldaV  598
            QSSLWQR L R +D  ++  +++ LL+RSRYIW RST+A+RRGYFL+G+GL +G  LDA+
Sbjct  621  QSSLWQRSLQRYRDENERILLKSGLLSRSRYIWQRSTAAGRRGYFLSGVGLTTGLRLDAI  680

Query  599  APEANLLLVQANASLLVSDaeaaiqaitalaeRVFGFYPFTPDPFPDNWRHILRCWLLGQ  658
            A+ AN LL++ANA+++ +DAE AI AITALAE VF FYPF PDP+P++WR ILR WLLG+
Sbjct  681  AAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFTFYPFIPDPLPGDWRGILRSWLLGE  740

Query  659  PLADLVAGQEGDALQFIEGGLVYRLPWAMEAVRVRAIANGDVVGDFGLTLNDYEVGLAVP  718
            P++++   Q +++LQF+E GLVYRLPWAMEA+RVRA ANGD++GD + TL+DYE+G+AV+
Sbjct  741  PMTNVANTQASETLQFVENGLVYRLPWAMEAIRVRATANGDLIGDTDTTLDDYELGFAVA  800

Query  719  AVETGTMNRSASILIQSGFNSRLSAIKAVNDTAATFTTGWELRAWLRSPLVTALSTQPDW  778
            AVETGT++RS+S+LIQ+GF+SRL+AIK V DT+A F +G ELR WL S  V + + + DW
Sbjct  801  AVETGTLSRSSSLLIQAGFSSRLAAIKVVTDTTADFQSGQELRRWLNSEEVISHTDNHDW  860

Query  779  PTAETRALWLDFTRDFAPFDGRTWAERRYRAQVQWHgvppppgtpmtvYHWNGQPIVLSA  838
            PT+ETR +WL+F   ++P +++ W+ +RY + V+W++ P+  GTP+ +Y  +G   VL+ 
Sbjct  861  PTPETRVMWLEFLGSLSPKGSQVWSRHRYNGMVDWRDTPAVIGTPLQLYTVDGIHHVLAD  920

Query  839  EGTLRGALNHPLNPNRRGLVRATVAQEHGHLDLSYRGPDDL  879
            +GT  G++N  +N NRRGL+R  V +E+G+  + Y GPDD+
Sbjct  921  DGTPLGSINGRINTNRRGLLRVEVDDENGRAMFDYLGPDDF  961

6) Mpe_A1672 in NC_008825


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score =  826 bits (3127),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 500/963 (52%), Positives = 746/963 (78%), Gaps = 14/963 (1%)

Query  210   MAALAVAMLGLERGDETLLQSARERIQRGldvaadldlvaaWWCHRLAIHLLGGLWETSF  269
             M+A+++ +L++ERG+  LL  A E+++ +L + A++++++ WW + ++IHLL++LW  +F
Sbjct  1     MSAISLYLLAVERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTF  60

Query  270   HQVLPLGGPPGADVGDWVRLRKIFIASLYRRGRSEIELWPSQLQAARRVLDAEVNLVLSL  329
             H+ LPL  P G+D ++W  LR +FIA L RR R+EI+LWPSQ +AA R ++ + +LV+SL
Sbjct  61    HERLPLV-PVGGDAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSL  119

Query  330   PTSAGKTRIAELCILASLARGRRVVFVTPLRALSAQTEVGLRRTFAPVGKSVSSLYGSIG  389
             PTSAGKTRIAELCIL  LA G+RVVF+TPLRALSAQTE  L RTF+P+GK++S LYGSIG
Sbjct  120   PTSAGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIG  179

Query  390   ASGADIDALRSTDIVVATPEKLDFALRSDPTLLDDVGLIVLDEGHMIGLGEREVRYEAQI  449
              SG D DA+R  DIVVATPEKLDFALR+DP++++DVGL+++DEGHMIG +EREVRYE QI
Sbjct  180   VSGMDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQI  239

Query  450   QRLLRRPDAAQRRIVCLSAILPDGDQLEDFAGWLTRDRPDGLIKDDWRPTRLRFGEVDWK  509
             QRLLRR DA  RRIVCLSAILPDG+QL+DFAGWL RD+P+G IK++WRPTRL+FGEV W 
Sbjct  240   QRLLRRQDADTRRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWS  299

Query  510   GQHAQLNVNVGDEKPFIPRFVVAKKPTRGRAR------KLFPADQAQLCIATAWRLVEEG  563
             +  ++LN++VG E + ++RF+V+++P + +        K+FP+D+ +LC+ATAWRL+E+G
Sbjct  300   APAGRLNLSVGYEAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDG  359

Query  564   QTVLVFCPMRRSVLPLAATIIEMHKRGHIDSVLEQAPSALTRALAVGTEWFGPDHDILAC  623
             QTVL++CP+RRSV P+A TI+++H+RG + S+++ AP  L  A+++G EW+G++  ILAC
Sbjct  360   QTVLIYCPLRRSVEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILAC  419

Query  624   LKLGVAVHHGALPTPYRKEVERLLREGVLRVTVSSPTLAQGLNLAATSLVFRGVRRGRDL  683
             L+LGVA+HHGALPT+YRKE+ERLLR+GVL+VT+SSPTLAQGLNL+AT++V ++++R R+L
Sbjct  420   LRLGVALHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNREL  479

Query  684   LDVAEFRNVVGRAGRAYIDVEGLVVYPMFDNHRQRRNDWQDLVANHSGREMESGLLRLIF  743
             + V+EFRNV+GRAGRAY+DVEGLV+YP+FD+  +R+ +W+ L ++ ++REMESGL++L+ 
Sbjct  480   IKVSEFRNVIGRAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDTGAREMESGLIQLVC  539

Query  744   TLLSRMANKLGTRDVGALLEYVAGQA-AWEFPVLPSetteeateaRHRWDQHLASLDTAI  802
              LL RM  +LG  D+ AL EYV+ +A AWEFP + +E+ +E   A+  W+++L++LDTAI
Sbjct  540   VLLIRMHTRLGG-DLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAIWEKQLSTLDTAI  598

Query  803   FSLLGDTIVLDAEVETKLDEILVASLFQRRLARHKEGIRQALPK-GLHARARYVWRNSTP  861
             +SLLG+  + D ++ET LD+IL +SL QR L R ++   + L K GL +R+RY+W+ ST+
Sbjct  599   LSLLGENDIPDDQIETALDDILQSSLWQRSLQRYRDENERILLKSGLLSRSRYIWQRSTA  658

Query  862   TQRRGYFlagvglaagkalDKHAPELEQLLLTANVSIDLGQHNeaveaivafaeiafdia  921
             + RRGYFL+GVGL++G  LD  A+  +QLL+ AN +I  G+ +EA+ AI A+AE  F + 
Sbjct  659   AGRRGYFLSGVGLTTGLRLDAIAAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFTFY  718

Query  922   PFKPDKLIDGWESLLRRWLLGQPVADALSEDSDDEIQFIEQAFVYNLPWAMEAVRVRAEA  981
             PF PD L ++W ++LR WLLG+P+++  + ++ + +QF+E+++VY LPWAMEA+RVRA A
Sbjct  719   PFIPDPLPGDWRGILRSWLLGEPMTNVANTQASETLQFVENGLVYRLPWAMEAIRVRATA  778

Query  982   HEDLFSD-EIKLSDYPRAHAVAALETGTLSIAAATLIQAGFGSRLGAIRAVAETGATFDS  1040
             + DL++D +  L DY  + AVAA+ETGTLS +++ LIQAGF+SRL+AI+ V++T A F+S
Sbjct  779   NGDLIGDTDTTLDDYELGFAVAAVETGTLSRSSSLLIQAGFSSRLAAIKVVTDTTADFQS  838

Query  1041  MSGLMGWLASDEVGALSAAPNWPTPESNPLWVDFNGPGGAQATQPWAATEYTSGITWRGA  1100
                L  WL S+EV + +   +WPTPE+  +W++F G+ +++++Q W+   Y + + WR++
Sbjct  839   GQELRRWLNSEEVISHTDNHDWPTPETRVMWLEFLGSLSPKGSQVWSRHRYNGMVDWRDT  898

Query  1101  PMPPGTALRLGGGPGKERSVFTADFREVGAI-GWTPSA-QGLIVAEATGDTGKFTLEHIG  1158
             P   GT+L+L    G ++ V++ D   +G+I G+  +  +GL+  E  ++ G+  ++ +G
Sbjct  899   PAVIGTPLQLYTVDGIHH-VLADDGTPLGSINGRINTNRRGLLRVEVDDENGRAMFDYLG  957

Query  1159  PGK  1161
             P+ 
Sbjct  958   PDD  960

7) I633_15250 in NC_021716


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score =  823 bits (3115),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 510/953 (54%), Positives = 722/953 (76%), Gaps = 12/953 (1%)

Query  214   SAIFEFLFALESGNAALLENSISRIETSLQVCSELSLLPQWWILRITKYLLRDLWDASFH  273
             SAI  +L+A+E G++ LL  +I ++  SL +C+++++LPQWW+  IT  LL DLW  +FH
Sbjct  2     SAISLYLLAVERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTFH  61

Query  274   CIIPVTPDHPQAQEWLQMRWLFIASLLKRNKAEIDLWPSQMEGARRAVNDWDDLVVSLPT  333
               +P+ P   +A EW  +R LFIA L +R +AEIDLWPSQ E+A R+VND DDLVVSLPT
Sbjct  62    ERLPLVPVGGDAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLPT  121

Query  334   SAGKTRIAELCILRCLAIGKRVLFITPLRALSAQTEVSLRKTFLPLGKSVSSLYGSIGTS  393
             SAGKTRIAELCILRCLA GKRV+FITPLRALSAQTE +L +TF PLGK++S LYGSIG S
Sbjct  122   SAGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIGVS  181

Query  394   NFEQDMIRSQDIVVGTPEKLDFALRNNPSLIDDVGLVVLDEGHMIGLNEREISYEVQIQR  453
               ++D IR +DIVV+TPEKLDFALRN+PS+I+DVGL ++DEGHMIG +ERE+ YEVQIQR
Sbjct  182   GMDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQR  241

Query  454   LLKRQDADQRRIVCLSAILPDSDQLDDFVGWLRRDKDGDALRSNWRPTDLRFGEIVWQRD  513
             LL+RQDAD RRIVCLSAILPD++QLDDF GWLRRDK G+++++NWRPT L+FGE++W   
Sbjct  242   LLRRQDADTRRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWSAP  301

Query  514   RAQINFTIGEAQPFIPDYIQHTVPPIGR------RTTPFPRDKKELTLATAWKLAKDKHT  567
              +++N+++G   + ++ +I    PP  +      RT  FP D+KEL LATAW+L  D +T
Sbjct  302   AGRLNLSVGYEAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQT  361

Query  568   VLIYCPERRSVNSFARDIIDLHNRGALESVLSVPINKLELAIVLGEEWLGESNPIVECLK  627
             VLIYCP RRSV++FA  I+DLH+RG L S++  + + L+ AI LGEEWLG  +PI+ CL+
Sbjct  362   VLIYCPLRRSVEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILACLR  421

Query  628   IGVAVHHGALPTPFRKEMEKLLRDGVLKVTVSSPTLAQGLNLSATAVIVFSLTRNRNSID  687
             +GVA+HHGALPT++RKE+E+LLRDGVLKVT+SSPTLAQGLNLSATA+++ SL RNR+ I 
Sbjct  422   LGVALHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRELIK  481

Query  688   VAEFKNVIGRAGRAFVDTHGLVLYPIFDRHEWFRAQWRQLVEDTNARNMESGLALLVNEL  747
             V+EF+NVIGRAGRA+VD +GLV+YPIFD+ +  +++W+ L  DT AR+MESGL  LV  L
Sbjct  482   VSEFRNVIGRAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDTGAREMESGLIQLVCVL  541

Query  748   IVRMANSVGNTAIDTLLEYVLNNAGGWNFPAITGEEQDQSEIQKASWNKHIVSLDTALLS  807
             ++RM   +G   + +L EYV NNA +W+FP I  E  ++ +I +A W+K++ +LDTA+LS
Sbjct  542   LIRMHTRLGG-DLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAIWEKQLSTLDTAILS  600

Query  808   MLGSEDIPTEEIPEALDRLLESSLWQRRLNRYEQTNEGMKNLFDTVLSQRAKHIWERTTA  867
             +LG +DIP ++I  ALD +L+SSLWQR L+RY + NE  + L+ + L  R++ IW+R+TA
Sbjct  601   LLGENDIPDDQIETALDDILQSSLWQRSLQRYRDENE--RILLKSGLLSRSRYIWQRSTA  658

Query  868   EQRRGYFLAGVGLETGLKLDAISEQanallvnanafllaGDHQQVIATTKQLAELVFNIE  927
               RRGYFL+GVGL TGL+LDAI+ +AN LL++ANA +++GD ++ IA+   LAE VF + 
Sbjct  659   AGRRGYFLSGVGLTTGLRLDAIAAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFTFY  718

Query  928   PFVPRNLPEGWRDILDLWLSGDVISEHEFADINESLMFIEDALIYRLPWGLEAIKVRAQA  987
             PF+P  LP +WR+IL  WL G+ +++   ++ +E+L F+E++L+YRLPW++EAI+VRA A
Sbjct  719   PFIPDPLPGDWRGILRSWLLGEPMTNVANTQASETLQFVENGLVYRLPWAMEAIRVRATA  778

Query  988   Ngd-digdgltiddYETDLLVPAIESGTLNRSAALLMQAGFNSRKAAIRAVETTNASFIN  1046
             NGD   + + T+DDYE ++ V+A+E+GTL+RS++LL+QAGF+SR AAI+ V  T A F +
Sbjct  779   NGDLIGDTDTTLDDYELGFAVAAVETGTLSRSSSLLIQAGFSSRLAAIKVVTDTTADFQS  838

Query  1047  SRQLKDWLHSEQVFNLAITFNWPTPETSNLWWefvsefepssesvWKPSVAELPVQWMDS  1106
             +++L+ WL+SE+V++ +   +WPTPET  +W EF++ + P +  VW     +  V+W D+
Sbjct  839   GQELRRWLNSEEVISHTDNHDWPTPETRVMWLEFLGSLSPKGSQVWSRHRYNGMVDWRDT  898

Query  1107  YEPQYGQLVKLSNAREEATLVLASNGETIGELRSRLKLQEKGIYLAKVHQDTS  1159
               +  G  ++L    +    VLA +G  +G + +R++ + +G+    V+++ +
Sbjct  899   -PAVIGTPLQLYTV-DGIHHVLADDGTPLGSINGRINTNRRGLLRVEVDDENG  949

8) Mesau_06001 in NC_019973


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score =  804 bits (3043),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 503/958 (53%), Positives = 721/958 (76%), Gaps = 18/958 (1%)

Query  221   ERGDAELMGQAVDRVDIGREEAAGVSMVPQWWCHRLTAHLLRDLWDTSFHQRLPLSPNNL  280
             ERG++ L+++A++++ I+    A  +M+PQWW + +T HLL DLW  +FH+RLPL P   
Sbjct  12    ERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTFHERLPLVPVG-  70

Query  281   DNAEGWKQLRELFVASAIRRSRAEIELWPSQLDAVEQAISSNGNMVVSLPTSAGKTRVAE  340
             ++A  W  LRELF+A   RR+RAEI+LWPSQ +A  ++++ N+++VVSLPTSAGKTR+AE
Sbjct  71    GDAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLPTSAGKTRIAE  130

Query  341   LCILRALAKGERVVFVTPLRALSAQTEVSLQKTLAPLGKTVSSLYGSIGVSETDSSFFED  400
             LCILR LA G RVVF+TPLRALSAQTE +L +T++PLGKT+S LYGSIGVS  D   + +
Sbjct  131   LCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIGVSGMDEDAIRQ  190

Query  401   RDVIVATPEKLDFALRNDPSllddvglvvldEGHMIGLGEREIRYEVQIQRLLRRSDAGS  460
             RD++VATPEKLDFALRNDPS+++DVGL ++DEGHMIG +ERE+RYEVQIQRLLRR DA++
Sbjct  191   RDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQRLLRRQDADT  250

Query  461   RRIVCLSAVLPDGDQLDDFCNWLTGDAKDGLIRKNWRPTRLRYGEVTWRGTHARLDARIG  520
             RRIVCLSA+LPDG+QLDDF  WL  D  +G I++NWRPTRL++GEV W +  +RL+  +G
Sbjct  251   RRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWSAPAGRLNLSVG  310

Query  521   DEAPWVENYISGFVP--------KGRRTQFPRDQRELCLATAWRSVEEGQSALIFCPLRR  572
              EA+WV  +I +  P        K R   FP D++ELCLATAWR +E+GQ+ LI+CPLRR
Sbjct  311   YEAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQTVLIYCPLRR  370

Query  573   SVQPFAEAVVTLHRQGALRSLFKGDKAVLADALAIGAEWLSPNHDLLKCLELGVAVHHGA  632
             SV+PFAE++V LH++G L SLF +   +L  A+++G EWL+++  +L CL LGVA+HHGA
Sbjct  371   SVEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILACLRLGVALHHGA  430

Query  633   LPTPYRKEVERLLREGILPVTISSPTLAQGLNLSASAVIFHGLKRNRKELASSEFRNIVG  692
             LPT+YRKE+ERLLR+G+L VTISSPTLAQGLNLSA+A++ H+L RNR  +  SEFRN++G
Sbjct  431   LPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRELIKVSEFRNVIG  490

Query  693   RAGRAYVDVEGLVLFPMYDNQMTGKAEWNALIANQAGHEMESGllrliftllarlalrtG  752
             RAGRAYVDVEGLV++P++D+    +++W++L ++ +++EMESGL++L+  LL R+  R G
Sbjct  491   RAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDTGAREMESGLIQLVCVLLIRMHTRLG  550

Query  753   DKSVKGLSEYVLNNTSAWDFVRLRaetaeaaaaGQVQWNSHLASLDTAILSLLSDGdvae  812
             +  +K+L+EYV NN+ AW+F  + +E+++    +Q  W+ +L++LDTAILSLL++ D+++
Sbjct  551   G-DLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAIWEKQLSTLDTAILSLLGENDIPD  609

Query  813   adledalddvlNSSLFQRRLAR-RRANQHEVYRAVLLGRAKLIWANSTPKQRKGYFLSGV  871
              ++E ALDD+L+SSL QR L R R  N++ + ++ LL+R++ IW  ST+  R+GYFLSGV
Sbjct  610   DQIETALDDILQSSLWQRSLQRYRDENERILLKSGLLSRSRYIWQRSTAAGRRGYFLSGV  669

Query  872   GLTTGKALDANSPKLNQLLVEANGAILSKDDIKAIKAITDFAKIVFAIVPFVPDNLPKNW  931
             GLTTG  LDA ++K NQLL++AN+AI++ D   AI AIT +A  VF++ PF+PD LP +W
Sbjct  670   GLTTGLRLDAIAAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFTFYPFIPDPLPGDW  729

Query  932   KAILDAWLRGQALQSFVAEDQDSVLRFVEQGFVYMLPWAMESVRVRGMANGDILAPTKGL  991
             ++IL +WL G+++ +    +    L+FVE+G+VY LPWAME++RVR+ ANGD+++ T   
Sbjct  730   RGILRSWLLGEPMTNVANTQASETLQFVENGLVYRLPWAMEAIRVRATANGDLIGDT---  786

Query  992   PDTTLEDMELGVAVAAVETGSLDVRAALIMRTGFASRSAAIKIIADMDPNFDSTQSLRRW  1051
              DTTL+D ELG AVAAVETG+L   ++L++++GF+SR AAIK+++D  ++F+S Q LRRW
Sbjct  787   -DTTLDDYELGFAVAAVETGTLSRSSSLLIQAGFSSRLAAIKVVTDTTADFQSGQELRRW  845

Query  1052  LRIPEVRKATEDEAFPTPETHRLWLEYIQSVIRTSSARWSAEQEVCDVTWTDDAPSEGTP  1111
             L   EV   T+++  PTPET+ +WLE++ S+   +S  WS ++    V W D ++  GTP
Sbjct  846   LNSEEVISHTDNHDWPTPETRVMWLEFLGSLSPKGSQVWSRHRYNGMVDWRDTPAVIGTP  905

Query  1112  LRLIEDEEDSQTIVTDAEFRPLGTVARILSPGRCGLLRTTVMK-GGKVALRYLGPDDL  1168
             L+L   +   + +  D+   PLG++   ++  R GLLR  V    G+  + YLGPDD+
Sbjct  906   LQLYTVDGIHHVLADDGT--PLGSINGRINTNRRGLLRVEVDDENGRAMFDYLGPDDF  961

9) Pnap_4384 in NC_008757


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score =  756 bits (2862),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 483/967 (50%), Positives = 724/967 (75%), Gaps = 14/967 (1%)

Query  207   LSAMSQTLLALERGEHSLILQAQARLEEGLSVAGELNLVTQWWAHRLAIHIVGGLWANSF  266
             +SA+S  LLA+ERGE  L+ +A  +L  +LS+ +++N++ QWW + ++IH++++LW+++F
Sbjct  1     MSAISLYLLAVERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTF  60

Query  267   HSLLPSQGPAGADVGDWVHLRKLLIASLMRRRRAEIELWPSQIDAAKRVLEFEANLVLSL  326
             H  LP   P G+D ++W  LR L+IA L RR RAEI+LWPSQ +AA R ++ + +LV+SL
Sbjct  61    HERLP-LVPVGGDAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSL  119

Query  327   PTSAGKTRIAELCILACLARGKRVVFVTPLRALSAQTEVSLRRTFGPLGKTVsslygsig  386
             PTSAGKTRIAELCIL CLA GKRVVF+TPLRALSAQTE +L RTFGPLGKT+S LYGSIG
Sbjct  120   PTSAGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIG  179

Query  387   tsssDVDALKSLDIVVSTPEKLDFALRSDPQLLDDIGLVVLDEGHMIGLGEREVRYEAQI  446
              S+ D DA++  DIVV+TPEKLDFALR+DP +++D+GL ++DEGHMIG +EREVRYE QI
Sbjct  180   VSGMDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQI  239

Query  447   QrllrradaasrrIICLSAILPDGDQLIDFTAWLTSDRENGLIKNDWRPTRLRFGEVDWN  506
             QRLLRR DA +RRI+CLSAILPDG+QL DF++WL  D+  G IKN+WRPTRL+FGEV W+
Sbjct  240   QRLLRRQDADTRRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWS  299

Query  507   PVSKLAQLKIVVGDEHPFVSKFVVGK-----TLNANKN-AKVYPASQTDLCILSAWRLIE  560
             + +  ++L++ VG E + VS+F+V++      L  +K+ +K++P+ + +LC+ +AWRLIE
Sbjct  300   APA--GRLNLSVGYEAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIE  357

Query  561   EGQSVLVFCPLRVSVVPFAKRIIEMIQQGLIVPMLTPPAEVLASALAVGVEWFGPDHEIL  620
             +GQ+VL++CPLR SV PFA  I+++ Q+GL+ +++ +++++L +A+++G EW+G++  IL
Sbjct  358   DGQTVLIYCPLRRSVEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPIL  417

Query  621   KCLRMGVAVHHGELPASFRKEVERLLRDGVLKLTVSSPTLAQGLNLAATSLVFHGHARKG  680
              CLR+GVA+HHG LP+++RKE+ERLLRDGVLK+T+SSPTLAQGLNL+AT++V H+  R+ 
Sbjct  418   ACLRLGVALHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNR  477

Query  681   APIDVSEFRNVVGRAGRAYIDIEGLVLYPMFDKHEKRRTAWANLIASTKGREMESGILQL  740
               I VSEFRNV+GRAGRAY+D+EGLV+YP+FDK +KR+T W  L + T +REMESG++QL
Sbjct  478   ELIKVSEFRNVIGRAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDTGAREMESGLIQL  537

Query  741   LYSLLVRIARKLDAPDVSTVLDYVAGQG-GWDFPFLRSETGWRAANAAEEWPRHLTSLDT  799
             +  LL+R+  +L++ D+ ++ +YV+ ++ +W+FP + +E+      A   W ++L++LDT
Sbjct  538   VCVLLIRMHTRLGG-DLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAIWEKQLSTLDT  596

Query  800   AIFSLLGDAQVPDEEIEATLDEVLTSSLFMRRMAR-RDGLIQNLLIGGLKARVNFIWSNS  858
             AI+SLLG+ ++PD++IE++LD++L SSL  R + R RD   + LL +GL +R  +IW  S
Sbjct  597   AILSLLGENDIPDDQIETALDDILQSSLWQRSLQRYRDENERILLKSGLLSRSRYIWQRS  656

Query  859   SALQRRGYFlaglglasgqalDSKAKELESLLLQANVAVGEGEVEMAIQAIIGFAHIAFE  918
             +A  RRGYFL+G+GL++G  LD+ A   + LL++AN A+  G+ E AI AI ++A+  F 
Sbjct  657   TAAGRRGYFLSGVGLTTGLRLDAIAAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFT  716

Query  919   IPPFAPNGLPGNWKYILELWLRGVPVPHIGSNDPDGTVSLIEGAFVYNLPWAMEAVRVRA  978
             + PF P+ LPG+W+ IL  WL G P+ ++++ ++  T+ ++E ++VY LPWAMEA+RVRA
Sbjct  717   FYPFIPDPLPGDWRGILRSWLLGEPMTNVANTQASETLQFVENGLVYRLPWAMEAIRVRA  776

Query  979   EAHLDLFSN-DVSVANYGRAHAVAAIETGTLSVAASTLIKAGFASRLGAIHAVTVTAADF  1037
              A+ DL+++ D ++ +Y  + AVAA+ETGTLS ++S LI+AGF+SRL+AI  VT T+ADF
Sbjct  777   TANGDLIGDTDTTLDDYELGFAVAAVETGTLSRSSSLLIQAGFSSRLAAIKVVTDTTADF  836

Query  1038  DSSAGMRAWLLSAEVKARRDNPSWPTVESHELWVDFTAPHGSGYTKPWLATAYTGPVTWH  1097
             +S+  +R WL S EV ++ DN  WPT E++ +W++F ++ ++  ++ W    Y G V W+
Sbjct  837   QSGQELRRWLNSEEVISHTDNHDWPTPETRVMWLEFLGSLSPKGSQVWSRHRYNGMVDWR  896

Query  1098  glpmppgtplrlgggpgKENAIYTADFKEVGKIGYAFNQAAVGLSIATATGAANEIAFEY  1157
             + P   GTPL+L    G ++ + + D   +G I   +N    GL      +      F+Y
Sbjct  897   DTPAVIGTPLQLYTVDGIHH-VLADDGTPLGSINGRINTNRRGLLRVEVDDENGRAMFDY  955

Query  1158  IGPNDLV  1164
             +GP+D++
Sbjct  956   LGPDDFI  962

10) Rpdx1_0864 in NC_014834


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score =  530 bits (2001),  Expect = 1e-151, Method: Compositional matrix adjust.
 Identities = 383/937 (41%), Positives = 604/937 (65%), Gaps = 54/937 (5%)

Query  198   ALAHFDLALETGEPEPIEtartllatavrlaDNAENVPLWWISNICRHLIDDLWQHSLHQ  257
             A++ + LA+E GE+  +  A   L  ++ +  + + +P WW++ I  HL+ DLW +++H+
Sbjct  3     AISLYLLAVERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTFHE  62

Query  258   NLPTEPPEGTEEKYPDLRRLFISSLYARKTSEVELWPSQREAAQRSTDVTDDLVVALPTS  317
              LP  P  G     P LR LFI+ L  R  +E++LWPSQREAA RS +  DDLVV+LPTS
Sbjct  63    RLPLVPVGGDAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLPTS  122

Query  318   AGKTRVAEIAALMTLSSARRVLIVTPLRALSAQTERSFRKTFAPLGFsvsslygasglsa  377
             AGKTR+AE+  L  L++++RV+++TPLRALSAQTE ++ +TF+PLG ++S LYG+ G+S+
Sbjct  123   AGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIGVSG  182

Query  378   gDEDALRTREIIIATPEKLDFALRSDPSLIDDVGLIVLDEGHMIGPSEREIRYETLVQRL  437
              DEDA+R R+I++ATPEKLDFALR+DPS+I+DVGL+++DEGHMIG+ ERE+RYE  +QRL
Sbjct  183   MDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQRL  242

Query  438   LRRADAGERRIVCLSAILPSGDELDDLTAWIRSDEPGEPVLSDWRPTRQRFGALTWRGKd  497
             LRR DA+ RRIVCLSAILP G++LDD+++W+R D PG P+ ++WRPTR +FG + W +  
Sbjct  243   LRRQDADTRRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWSAPA  302

Query  498   allrldldddgpfldKFVVQK-------PARGKEKKPYPRKNSHLALFAAWEFAGQGKRT  550
             + L L ++ +++ + +F+V +       P + +  K +P  N +L L +AW +  +G+  
Sbjct  303   GRLNLSVGYEAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQTV  362

Query  551   LIFSTQANWVEGYGKQIVDLCKRGYLDSLLEDEASI-ARALEVGKEWLGEDHPAVACLKA  609
             LI+      VE ++  IVDL +RG L SL++  + I   A+ +G EWLG + P +ACL+ 
Sbjct  363   LIYCPLRRSVEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILACLRL  422

Query  610   GVAIHHGRLPSPFLRELEVLLSEGVLKVIVASPTLSQGlnlnaavllvpalYRAGEKIKG  669
             GVA+HHG LP+++ +E+E LL +GVLKV ++SPTL+QGLNL+A+ +++ +L R  E IK 
Sbjct  423   GVALHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRELIKV  482

Query  670   EEFANVAGRAGRAFVDVEGLIVHVMFDNINWRKKEWGKLVASAKARTLKSGLIQIVAEIL  729
              EF NV GRAGRA+VDVEGL++  +FD++N R+ +W  L + + AR + SGLIQ+V  +L
Sbjct  483   SEFRNVIGRAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDTGAREMESGLIQLVCVLL  542

Query  730   ERLSREGVLDRDDAWEYLANAREAWRSPEEEASVAERLAAARQNdgdvahdddgeddddd  789
              R+      D     EY++N   AW  PE  +  ++    A+                  
Sbjct  543   IRMHTRLGGDLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAI----------------  586

Query  790   aeetieeePLSQIVERLDATVFGLIEALDSDRADLPKLLDEALRGSLWARQIAR-EDEDV  848
                        + +  LD+++++L+   D    ++   LD+ L++SLW R + R  DE+ 
Sbjct  587   ---------WEKQLSTLDTAILSLLGENDIPDDQIETALDDILQSSLWQRSLQRYRDENE  637

Query  849   APLHKRVIEARADLIWKTTTASARRGHFAMGVGLEAGLAIDAMADVLAELLDRADVAALS  908
               L K  + +R+  IW+ +TA++RRG F  GVGL +GL +DA+A    +LL  A+ A ++
Sbjct  638   RILLKSGLLSRSRYIWQRSTAAGRRGYFLSGVGLTTGLRLDAIAAKANQLLIDANAAIMG  697

Query  909   GDIDELVETLGGLGERLLFMRPFIPSKNNALPANWKAILHSWVSGEDVAKI----GPQNM  964
             GD +E + ++ +L+E ++   PFIP   ++LP++W++IL+SW+ GE ++++    +++ +
Sbjct  698   GDAEEAIAAITALAEEVFTFYPFIP---DPLPGDWRGILRSWLLGEPMTNVANTQASETL  754

Query  965   RAVEEAFTYRLVWALEAVRTRRMSLG-WSPDTvagg-------aaaavETGVPQFMMSML  1016
             + VE+++ YRL WA+EA+R R  + G    DT +         A AAVETG      S+L
Sbjct  755   QFVENGLVYRLPWAMEAIRVRATANGDLIGDTDTTLDDYELGFAVAAVETGTLSRSSSLL  814

Query  1017  IRAGLPSRRAAMAAIEDAKPIFVTPAEMRAWLESDEITAYTDAGDWPTPDTAALWARFRT  1076
             I+AG++SR AA+  + D+ + F +  E+R WL+S+E+ + TD  DWPTP+T  +W  F  
Sbjct  815   IQAGFSSRLAAIKVVTDTTADFQSGQELRRWLNSEEVISHTDNHDWPTPETRVMWLEFLG  874

Query  1077  EALSGGIQKWSVEHYKRLLD-----TAAAPPAGLYRI  1108
                + G Q WS ++Y+ ++D     +  + P  LY +
Sbjct  875   SLSPKGSQVWSRHRYNGMVDWRDTPAVIGTPLQLYTV  911

11) helS in NC_018299


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score =  522 bits (1970),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 376/938 (41%), Positives = 598/938 (64%), Gaps = 59/938 (6%)

Query  198   ALAHFDFALETGEPEPIESARTLLRTAVSLADNAENVPLWWISNLCRHLIDDLWQHSLHQ  257
             A++ + +A+E GE+  +  A   LR ++S+  + + +P WW++ +  HL+ DLW +++H+
Sbjct  3     AISLYLLAVERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTFHE  62

Query  258   NLPTEPPEGTEEKYPDLRRLFISSLYARKTSEVELWPSQREAARRSTDVTDDLVVALPTS  317
              LP  P  G     P LR LFI+ L  R  +E++LWPSQREAA RS +  DDLVV+LPTS
Sbjct  63    RLPLVPVGGDAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLPTS  122

Query  318   AGKTRVAEIAALMTLSSARRVLIVTPLRALSAQTERSFRKTFAPLGFSVSSLYGASGLSV  377
             AGKTR+AE+  L  L++++RV+++TPLRALSAQTE ++ +TF+PLG ++S LYG+ G+S 
Sbjct  123   AGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIGVSG  182

Query  378   GDEDALRTREIIIATPEKLDFALRSDPSLIDDVGLIVLDEGHMIGPSEREIRYETLVQrl  437
              DEDA+R R+I++ATPEKLDFALR+DPS+I+DVGL+++DEGHMIG+ ERE+RYE  +QRL
Sbjct  183   MDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQRL  242

Query  438   lrradaadrrIVCLSAILPSGDELDDLTAWIRSDEPGKPVRSDWRPTRQRFGALTWRGKd  497
             LRR DA  RRIVCLSAILP G++LDD+++W+R D PG P++++WRPTR +FG + W +  
Sbjct  243   LRRQDADTRRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWSAPA  302

Query  498   allrldldddgpfldKFVVEK-------PARGKEKKPYPRKNSHLALFAAWEFASQGKRT  550
             + L L ++ +++ + +F+V +       P + +  K +P  N +L L +AW +  +G+  
Sbjct  303   GRLNLSVGYEAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQTV  362

Query  551   LIFSTQANWVESYGKQAMDLCKRGYLHSLLEDEASI-ARALEVGKEWLGEDHPAVACLKQ  609
             LI+      VE+++   +DL +RG L SL++  + I   A+ +G EWLG + P +ACL+ 
Sbjct  363   LIYCPLRRSVEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILACLRL  422

Query  610   GVAIHHGRLPSPFLRELEVLLSEGVLKVIVASPTLSQGlnlnaavllvpalYRASEKIKG  669
             GVA+HHG LP+++ +E+E LL +GVLKV ++SPTL+QGLNL+A+ +++ +L R  E IK 
Sbjct  423   GVALHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRELIKV  482

Query  670   EEFANVAGRAGRAFVDVEGLIVHVMFDKIDWRKREWRKLVASAKARTLKSGLIQIVAEIL  729
              EF NV GRAGRA+VDVEGL++  +FDK++ R+ +W+ L + + AR + SGLIQ+V  +L
Sbjct  483   SEFRNVIGRAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDTGAREMESGLIQLVCVLL  542

Query  730   ERLSREGVLDRDDAWEYLANAREAWRSPeeeaavaerlaaaveyeangdddeeggddeee  789
              R+      D     EY++N   AW  PE  +  ++    A                   
Sbjct  543   IRMHTRLGGDLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAI----------------  586

Query  790   tideePLSQIVERLDATVFGLIEALDADRADLPKLLDEALKGSLWARQIAR-EDEDIAPL  848
                     + +  LD+++++L+   D    ++   LD+ L++SLW R + R  DE+   L
Sbjct  587   ------WEKQLSTLDTAILSLLGENDIPDDQIETALDDILQSSLWQRSLQRYRDENERIL  640

Query  849   HKKVFEARADLIWKSTTAQTRRGHFAMGVGLEAGLSIDAMADELATLLDRADEAALRGDI  908
              K  + +R+  IW+ +TA  RRG F  GVGL +GL +DA+A     LL  A+ A + GD 
Sbjct  641   LKSGLLSRSRYIWQRSTAAGRRGYFLSGVGLTTGLRLDAIAAKANQLLIDANAAIMGGDA  700

Query  909   DELVDALCGLGERLLFMRPFIPDKANALPANWKAILHSWVSGEDVAKI----GPQNMRAV  964
             +E + A+ +L+E ++   PFIPD   +LP++W++IL+SW+ GE ++++    +++ ++ V
Sbjct  701   EEAIAAITALAEEVFTFYPFIPD---PLPGDWRGILRSWLLGEPMTNVANTQASETLQFV  757

Query  965   EEAFTYRLVWALEAVRTRRMSLGWSPetvagggaaavetgvPQFMMA------------M  1012
             E+++ YRL WA+EA+R R  + G     + G+  ++++     F +A            +
Sbjct  758   ENGLVYRLPWAMEAIRVRATANG----DLIGDTDTTLDDYELGFAVAAVETGTLSRSSSL  813

Query  1013  LIRAGLPSRRAAMAAIKDAQPVFVTPAEMRVWLESDEITAYTDAGDWPTPDTAALWARFR  1072
             LI+AG++SR AA+  + D+ + F +  E+R WL+S+E+ + TD  DWPTP+T  +W  F 
Sbjct  814   LIQAGFSSRLAAIKVVTDTTADFQSGQELRRWLNSEEVISHTDNHDWPTPETRVMWLEFL  873

Query  1073  TEALSGGIQKWSVENYKRLLD-----IAAAPPAGLYRI  1105
                 + G Q WS + Y+ ++D        + P  LY +
Sbjct  874   GSLSPKGSQVWSRHRYNGMVDWRDTPAVIGTPLQLYTV  911

12) hels in NC_018191


> AY233333|19|G19|37927528|AAP70293.1|Escherichia_coli_ECOR31|-|20747..23641|-|-|helicase-like 
protein
Length=964

 Score =  522 bits (1970),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 376/938 (41%), Positives = 598/938 (64%), Gaps = 59/938 (6%)

Query  198   ALAHFDFALETGEPEPIESARTLLRTAVSLADNAENVPLWWISNLCRHLIDDLWQHSLHQ  257
             A++ + +A+E GE+  +  A   LR ++S+  + + +P WW++ +  HL+ DLW +++H+
Sbjct  3     AISLYLLAVERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTFHE  62

Query  258   NLPTEPPEGTEEKYPDLRRLFISSLYARKTSEVELWPSQREAARRSTDVTDDLVVALPTS  317
              LP  P  G     P LR LFI+ L  R  +E++LWPSQREAA RS +  DDLVV+LPTS
Sbjct  63    RLPLVPVGGDAAEWPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLPTS  122

Query  318   AGKTRVAEIAALMTLSSARRVLIVTPLRALSAQTERSFRKTFAPLGFSVSSLYGASGLSV  377
             AGKTR+AE+  L  L++++RV+++TPLRALSAQTE ++ +TF+PLG ++S LYG+ G+S 
Sbjct  123   AGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLYGSIGVSG  182

Query  378   GDEDALRTREIIIATPEKLDFALRSDPSLIDDVGLIVLDEGHMIGPSEREIRYETLVQrl  437
              DEDA+R R+I++ATPEKLDFALR+DPS+I+DVGL+++DEGHMIG+ ERE+RYE  +QRL
Sbjct  183   MDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQRL  242

Query  438   lrradaadrrIVCLSAILPSGDELDDLTAWIRSDEPGKPVRSDWRPTRQRFGALTWRGKd  497
             LRR DA  RRIVCLSAILP G++LDD+++W+R D PG P++++WRPTR +FG + W +  
Sbjct  243   LRRQDADTRRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWSAPA  302

Query  498   allrldldddgpfldKFVVEK-------PARGKEKKPYPRKNSHLALFAAWEFASQGKRT  550
             + L L ++ +++ + +F+V +       P + +  K +P  N +L L +AW +  +G+  
Sbjct  303   GRLNLSVGYEAAWVSRFIVSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQTV  362

Query  551   LIFSTQANWVESYGKQAMDLCKRGYLHSLLEDEASI-ARALEVGKEWLGEDHPAVACLKQ  609
             LI+      VE+++   +DL +RG L SL++  + I   A+ +G EWLG + P +ACL+ 
Sbjct  363   LIYCPLRRSVEPFAETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILACLRL  422

Query  610   GVAIHHGRLPSPFLRELEVLLSEGVLKVIVASPTLSQGlnlnaavllvpalYRASEKIKG  669
             GVA+HHG LP+++ +E+E LL +GVLKV ++SPTL+QGLNL+A+ +++ +L R  E IK 
Sbjct  423   GVALHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRELIKV  482

Query  670   EEFANVAGRAGRAFVDVEGLIVHVMFDKIDWRKREWRKLVASAKARTLKSGLIQIVAEIL  729
              EF NV GRAGRA+VDVEGL++  +FDK++ R+ +W+ L + + AR + SGLIQ+V  +L
Sbjct  483   SEFRNVIGRAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDTGAREMESGLIQLVCVLL  542

Query  730   ERLSREGVLDRDDAWEYLANAREAWRSPeeeaavaerlaaaveyeangdddeeggddeee  789
              R+      D     EY++N   AW  PE  +  ++    A                   
Sbjct  543   IRMHTRLGGDLKALTEYVTNNAVAWEFPEIMTESPQERDIAQAI----------------  586

Query  790   tideePLSQIVERLDATVFGLIEALDADRADLPKLLDEALKGSLWARQIAR-EDEDIAPL  848
                     + +  LD+++++L+   D    ++   LD+ L++SLW R + R  DE+   L
Sbjct  587   ------WEKQLSTLDTAILSLLGENDIPDDQIETALDDILQSSLWQRSLQRYRDENERIL  640

Query  849   HKKVFEARADLIWKSTTAQTRRGHFAMGVGLEAGLSIDAMADELATLLDRADEAALRGDI  908
              K  + +R+  IW+ +TA  RRG F  GVGL +GL +DA+A     LL  A+ A + GD 
Sbjct  641   LKSGLLSRSRYIWQRSTAAGRRGYFLSGVGLTTGLRLDAIAAKANQLLIDANAAIMGGDA  700

Query  909   DELVDALCGLGERLLFMRPFIPDKANALPANWKAILHSWVSGEDVAKI----GPQNMRAV  964
             +E + A+ +L+E ++   PFIPD   +LP++W++IL+SW+ GE ++++    +++ ++ V
Sbjct  701   EEAIAAITALAEEVFTFYPFIPD---PLPGDWRGILRSWLLGEPMTNVANTQASETLQFV  757

Query  965   EEAFTYRLVWALEAVRTRRMSLGWSPetvagggaaavetgvPQFMMA------------M  1012
             E+++ YRL WA+EA+R R  + G     + G+  ++++     F +A            +
Sbjct  758   ENGLVYRLPWAMEAIRVRATANG----DLIGDTDTTLDDYELGFAVAAVETGTLSRSSSL  813

Query  1013  LIRAGLPSRRAAMAAIKDAQPVFVTPAEMRVWLESDEITAYTDAGDWPTPDTAALWARFR  1072
             LI+AG++SR AA+  + D+ + F +  E+R WL+S+E+ + TD  DWPTP+T  +W  F 
Sbjct  814   LIQAGFSSRLAAIKVVTDTTADFQSGQELRRWLNSEEVISHTDNHDWPTPETRVMWLEFL  873

Query  1073  TEALSGGIQKWSVENYKRLLD-----IAAAPPAGLYRI  1105
                 + G Q WS + Y+ ++D        + P  LY +
Sbjct  874   GSLSPKGSQVWSRHRYNGMVDWRDTPAVIGTPLQLYTV  911