>AF326777|19|G15|15808711|AAL08440.1|Shigella_flexneri_2a_YSH6000|+|20370..23336|tnpA|-|transposase
Length = 2967
Score = 1093 bits (2821), Expect = 0.0
Identities = 640/755 (85%)
Strand = Plus / Plus
Query: 1649 tgaagatcacgccgctggacgcggcagtaccagacgccgcgcaagccatgatcgaccaga 1708
||||||||||||||||||| ||||| || || ||| ||||||| || |||| |||||||
Sbjct: 1646 tgaagatcacgccgctggatgcggcggtgcccgacaccgcgcaggcgctgatagaccaga 1705
Query: 1709 cagctatgctgctgccgcacctcaaaatcaccgagttgctgatggaggtcgatgaatgga 1768
|||| ||| | ||||||||| |||| |||||||| ||||| | || |||||||| ||||
Sbjct: 1706 cagccatggtcctgccgcacgtcaagatcaccgaactgctgctcgaagtcgatgagtgga 1765
Query: 1769 cgggcttcacccgccacttcacacacctgaagaccagcgacacggccaaggacaa-aacc 1827
||||||||||||| |||||||| ||| |||| | |||| |||||||||||| ||||
Sbjct: 1766 cgggcttcacccggcacttcacgcacttgaaatcgggcgatctggccaaggacaagaacc 1825
Query: 1828 ttgctgttgacgacgatcctggccgacgcgatcaacctgggtctgaccaaaatggccgag 1887
| | ||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 1826 t-gttgttgaccacgatcctggccgacgcgatcaacctgggcctgaccaagatggccgag 1884
Query: 1888 tcctgccctggcaccacctacgccaagctgtcttggctgcaagcctggcacatccgcgat 1947
|||||||| ||||| |||||||| ||||| ||||||||||||||||||| | ||||||
Sbjct: 1885 tcctgccccggcacgacctacgcgaagctcgcttggctgcaagcctggcatacccgcgac 1944
Query: 1948 gaaacctattcgacggcgctggccgagctggtgaatgcgcagtttcggcaacccttcgcc 2007
||||| || ||||| ||| |||| || ||||| || || ||||||||||| ||||| |||
Sbjct: 1945 gaaacgtactcgacagcgttggctgaactggtcaacgctcagtttcggcatccctttgcc 2004
Query: 2008 ggcaactggggtgacggcaccacgtcatcgtcggacggccagaacttcagaaccggcagc 2067
|| ||||||| || |||||||| ||||| |||||||| ||||| ||| |||||| |||
Sbjct: 2005 gggcactggggcgatggcaccacatcatcatcggacggacagaatttccgaaccgctagc 2064
Query: 2068 aaagcagaaagcactggtcatatcaacccgaagtatggaagcagtccaggacggactttc 2127
|| ||| | ||||| || || |||||||| || ||||| ||||| |||||||||||||||
Sbjct: 2065 aaggcaaagagcacggggcacatcaacccaaaatatggcagcagcccaggacggactttc 2124
Query: 2128 tacacccatatctccgaccagtacgcgcccttcagtgccaaggtggtcaacgtgggcatt 2187
|||||||| ||||||||||| |||||||| ||| ||||||||||||| || ||| |
Sbjct: 2125 tacacccacatctccgaccaatacgcgccattccacaccaaggtggtcaatgtcggcctg 2184
Query: 2188 cgtgattcaacttacgtgcttgatggcctgctgtaccacgagtcggacttgcgcatcgag 2247
|| || ||||| |||||||| || ||||||||||||||||| || ||| |||| ||||||
Sbjct: 2185 cgcgactcaacctacgtgctcgacggcctgctgtaccacgaatccgacctgcggatcgag 2244
Query: 2248 gaacactacaccgacacggcaggcttcaccgatcacgtgtttggcttgatgcatttgctg 2307
|| ||||||||||||||||| ||||||||||||||||| || | | ||||||| | ||
Sbjct: 2245 gagcactacaccgacacggcgggcttcaccgatcacgtcttcgccctgatgcacctcttg 2304
Query: 2308 ggatttcgcttcgcgccgcgtatccgtgacttgggcgaaaccaagctattcatccccaag 2367
|| || |||||||||||||| ||||| ||| ||||||| |||||||| | |||||| |||
Sbjct: 2305 ggcttccgcttcgcgccgcgcatccgcgacctgggcgacaccaagctctacatcccgaag 2364
Query: 2368 ggcgatgccgcctatgacgcgctcaagccgatgat 2402
|||||||||||||||||||||||||||||||||||
Sbjct: 2365 ggcgatgccgcctatgacgcgctcaagccgatgat 2399
Score = 843 bits (2176), Expect = e-245
Identities = 518/650 (80%)
Strand = Plus / Plus
Query: 499 gccgaggccatcacccgtgccaaccgacgcatttacgcggcgctgaccgattctttgtta 558
|||||||| ||||||||||| ||||| ||||| |||| || || |||| | ||
Sbjct: 499 gccgaggcgatcacccgtgctaaccggcgcatctacgacgccttggccgaaccactggcg 558
Query: 559 tcaccccaccgtcagcgcctggacgaacttctcaagcgcaaggacggcagtaaagtgacg 618
| || || | ||||| ||||| || ||||||||| |||| | | || |||
Sbjct: 559 gacgcgcatcgccgccgcctcgacgatctgctcaagcgccgggacaacggcaagacgacc 618
Query: 619 tggctggcatggctgcgccagtcgcctgccaaaccgaactctcgccacatgctcgaacat 678
||| |||| ||| |||||||||| || ||||| || || || || || ||||| |||||
Sbjct: 619 tggttggcttggttgcgccagtctccggccaagccaaattcgcggcatatgctggaacac 678
Query: 679 attgagcgcctgaaatcctggcaagcacttgatctgcccgcaggcatcgagcggcaggtt 738
|| || ||||| || | ||||| ||||| |||||||| | ||||||||||||| ||||
Sbjct: 679 atcgaacgcctcaaggcatggcaggcactcgatctgcctaccggcatcgagcggctggtt 738
Query: 739 caccagaaccgcctgctcaaaatcgctcgtgaaggtggccagatgacgcctgctgatctg 798
|||||||||||||||||||| || || || || || ||||||||||| || || || |||
Sbjct: 739 caccagaaccgcctgctcaagattgcccgcgagggcggccagatgacacccgccgacctg 798
Query: 799 gcaaagttcgaggtgcaacgacgctatgccacgctggtagcgctggccatcgaaggcatg 858
|| || |||||| |||||| ||||| ||||| || || |||||||||| ||| ||||||
Sbjct: 799 gccaaattcgagccgcaacggcgctacgccactctcgtggcgctggccaccgagggcatg 858
Query: 859 gccaccgtcaccgatgaaatcatcgaccttcacgatcgcatcatcggcaagctgttcaac 918
|||||||||||||| |||||||||||||| ||||| |||||| | || |||||||| |||
Sbjct: 859 gccaccgtcaccgacgaaatcatcgacctgcacgaccgcatcctgggtaagctgtttaac 918
Query: 919 gcggccaagaacaagcatcagcagcagttccaggcttccggcaaggcgatcaacgacaag 978
|| |||||||| ||||||||||||||||||||||| || |||||||| ||||||| ||||
Sbjct: 919 gctgccaagaataagcatcagcagcagttccaggcgtcaggcaaggccatcaacgccaag 978
Query: 979 gtgcggatgtatgggcgcatcggtcaagcgttgattgaggccaagcaaagcggcagcgat 1038
|| || |||| |||||||||||||| ||| |||| || ||||||||| ||| |||||
Sbjct: 979 gtacgtctgtacgggcgcatcggtcaggcgctgatcgacgccaagcaatcaggccgcgat 1038
Query: 1039 ccgttcgccgccatcgaggccgttatgccctgggacaccttcgccgccagcgtcaccgaa 1098
|||| ||||||||||||||||| ||| ||||||| |||| |||| |||||||||||
Sbjct: 1039 gcgtttgccgccatcgaggccgtcatgtcctgggattcctttgccgagagcgtcaccgag 1098
Query: 1099 gcgcaaacattggcgcggcctgccgactttgatttcctgcaccacatcgg 1148
||||| | | |||| || | ||||| ||||||||||| | ||||||
Sbjct: 1099 gcgcagaagctcgcgcaacccgatgacttcgatttcctgcatcgcatcgg 1148
Score = 662 bits (1708), Expect = e-190
Identities = 383/455 (84%)
Strand = Plus / Plus
Query: 2519 gcagctacccgcgccagaacggcttggccgtggcgttgcgcgagctggggcgcatcgagc 2578
|||||||||||||||||||||| ||| |||| ||| |||||||| |||| ||||||||||
Sbjct: 2513 gcagctacccgcgccagaacggattgtccgtcgcgctgcgcgagttgggccgcatcgagc 2572
Query: 2579 gcacgctgttcattttggattggctgcaaagcgtggagctgcgccgccgcgtccatgcgg 2638
||||||||||||| | || ||||| |||||||| |||| ||||||||||| ||||| |
Sbjct: 2573 gcacgctgttcatcctagactggctacaaagcgtcaagctacgccgccgcgtgcatgccg 2632
Query: 2639 ggctgaataagggcgaggcgcgcaacgcgctggccagggcggtcttcttctaccgattgg 2698
||||||| ||||||||||||||||| ||||||||| | || || |||||| |||| | |
Sbjct: 2633 ggctgaacaagggcgaggcgcgcaatgcgctggcccgtgccgtgttcttcaaccgccttg 2692
Query: 2699 gtgaaatccgcgaccgcagttttgagcagcagcgctaccgggccagcggcctcaatctgg 2758
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2693 gtgaaatccgtgaccgcagtttcgagcagcagcgctaccgggccagcggcctcaacctgg 2752
Query: 2759 tgacggcggccatcgtgttgtggaacacggtatatctggagcgtgccaccagtgctttgc 2818
||||| ||||||||||| ||||||||||||| || ||||||||| | | ||| ||||
Sbjct: 2753 tgacgacggccatcgtgctgtggaacacggtctacctggagcgtacggcgcatgcgttgc 2812
Query: 2819 gtggcaacggcacggcgctggacgacacattgttgcaatatctgtcgccgctggggtggg 2878
| ||||| || || | || ||| | | ||||| || |||||||| || || ||||
Sbjct: 2813 gcggcaatggtcatgccgtcgatgactcgctattgcagtacctgtcgccactcggctggg 2872
Query: 2879 agcacatcaacctgaccggcgattacctatggcgcagcagcgccaaggtcggtgcgggga 2938
|||||||||| |||||||| |||||| |||||||||||||||||||| |||| |||||||
Sbjct: 2873 agcacatcaanctgaccggtgattacntatggcgcagcagcgccaagatcggcgcgggga 2932
Query: 2939 agtttaggccattgcgaccgctgccaccggcttag 2973
|||| ||||| | || | |||| ||||||||||
Sbjct: 2933 agttcaggccgctacggcntctgcaaccggcttag 2967
Score = 634 bits (1636), Expect = e-182
Identities = 371/442 (84%)
Strand = Plus / Plus
Query: 1194 cgtgctcaaattgcgggctgcgcccgccgccaagggtgtgctcgatgccatcgacatgct 1253
||||||||| ||||||| |||||||||||||| ||||| |||||||| || ||||
Sbjct: 1194 cgtgctcaagctgcgggccgcgcccgccgccaaaaacgtgcttgatgccattgaggtgct 1253
Query: 1254 gcgcggcatgaacagcgacagcgcgcgcaaggtgcccgccgatgcgccaaccgcattcat 1313
|||||||||||||| ||||| ||| |||||| |||| |||||||| || |||| |||||
Sbjct: 1254 gcgcggcatgaacaccgacaacgcccgcaagctgccagccgatgcaccgaccggcttcat 1313
Query: 1314 caagccgcgctgggcaaagctggttctgaccgacgacggcatcgaccggcgttactacga 1373
||||||||||||| || ||||| ||||||||| ||||||||||||||| ||||||||
Sbjct: 1314 caagccgcgctggcagaaactggtgatgaccgacgccggcatcgaccggcgctactacga 1373
Query: 1374 gttatgcgccctgtcggagctgaagaacgcgctgcgctccggtgatgtctgggtgcaggg 1433
| ||||| ||||| ||| |||||||| | |||||||| || || |||||||||||||
Sbjct: 1374 actgtgcgcgctgtccgagttgaagaactccctgcgctcgggcgacatctgggtgcaggg 1433
Query: 1434 ttctcgccagttcaaggacttcgacgaatacctggtgccggtcgagaagttcgccacttt 1493
||| |||||||||||||||||||| || |||||||| ||| |||||||||| ||| |
Sbjct: 1434 ttcacgccagttcaaggacttcgaggactacctggtaccgcccgagaagttcaccagcct 1493
Query: 1494 gaagctggccagcgaattgccgctggcagtggccaccgactgcgaccaatacctgcatga 1553
|||| | ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 1494 caagcagtccagcgaattgccgctggccgtggccaccgactgcgaacaatatctgcatga 1553
Query: 1554 ccggttggaattgttggaggcgcaactcgccacagtcaaccgcatggctgcggccaacga 1613
||| || || |||| || ||||| ||||| |||||||||||||| || ||||||||
Sbjct: 1554 gcggctgacgctgctggaagcacaacttgccaccgtcaaccgcatggcggcagccaacga 1613
Query: 1614 cttaccggatgccatcatcacc 1635
| | ||||||||||||||||||
Sbjct: 1614 cctgccggatgccatcatcacc 1635
Score = 551 bits (1423), Expect = e-157
Identities = 349/436 (80%)
Strand = Plus / Plus
Query: 1 atgccacgccgctcaatcctgtccgccaccgagcgcgaaagcctgctggcactgccagat 60
|||||||| || || |||||||||||| ||||||| |||||||||||||| |||| ||
Sbjct: 1 atgccacgtcgttccatcctgtccgccgccgagcgggaaagcctgctggcgttgccggac 60
Query: 61 gccaaagacgaactgatacggcactacacgttcaacgaaaccgacctgtcggtgatccgt 120
|||| ||||| ||||| || || ||||| |||||||| |||||||| ||| | |||||
Sbjct: 61 tccaaggacgacctgatccgacattacacattcaacgataccgacctctcgatcatccga 120
Query: 121 cagcgtcgcggcgccgcgaatcgattgggcttcgctgtgcagctttgctacttgcgattc 180
||||| ||||| | || ||||| |||||||||| |||||||| || ||| |||| ||
Sbjct: 121 cagcggcgcgggccagccaatcggctgggcttcgcggtgcagctctgttacctgcgcttt 180
Query: 181 cctggcacctttttgggcgtcgatgagcctccgtttccgcccctgttgcgcatggtggcc 240
|| ||| | | ||||||||||||| | ||||| |||||| ||||| |||| |||
Sbjct: 181 cccggcgtcatcctgggcgtcgatgaactaccgttcccgcccttgttgaagctggtcgcc 240
Query: 241 gcgcaactcaagatgccagtggaaagttggagcgagtacggccagcgcgaacagacacgg 300
| || |||||| | || ||||| |||| ||||||||||||||| || ||||| |||
Sbjct: 241 gaccagctcaaggtcggcgtcgaaagctggaacgagtacggccagcgggagcagacccgg 300
Query: 301 cgggagcacttggtcgagctgcaaacggtttttgggttcaagcccttcaccatgagccac 360
|| |||||| || |||||||||||| || || || ||| ||||||||||||||||||
Sbjct: 301 cgcgagcacctgagcgagctgcaaaccgtgttcggtttccggcccttcaccatgagccat 360
Query: 361 tatcggcaagccgtgcatacattgaccgagctggccttgcagaccgacaaaggcatcgtg 420
|| ||||| ||||| || | ||||||||||||| |||| ||||||||||||||||||
Sbjct: 361 taccggcaggccgtccagatgctgaccgagctggcgatgcaaaccgacaaaggcatcgtg 420
Query: 421 ctggcgagcgcacttg 436
||||| ||||| ||||
Sbjct: 421 ctggccagcgc-cttg 435
Score = 142 bits (367), Expect = 5e-34
Identities = 86/99 (87%)
Strand = Plus / Plus
Query: 2419 aacatcaagcaaatacgcgcccattgggatgaaattctgcggctggccacctccatcaag 2478
||||||||||| | |||||||||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 2413 aacatcaagcacgtccgcgcccattgggacgaaatcctgcggctggccacctcgatcaag 2472
Query: 2479 caaggcac-ggtaacggcttcgctgatgctgcgcaaact 2516
|| ||||| ||| ||||| ||||||||||| | |||||
Sbjct: 2473 cagggcacaggtgacggcctcgctgatgctcaggaaact 2511
Score = 39 bits (99), Expect = 8e-03
Identities = 24/30 (80%)
Strand = Plus / Plus
Query: 445 ctgcggcggcagagcattatcctgcccgcc 474
|||||||||||| | || |||||||||
Sbjct: 445 ctgcggcggcagtcggtcattctgcccgcc 474
Score = 28 bits (73), Expect = 1e+01
Identities = 16/20 (80%)
Strand = Plus / Plus
Query: 1164 gctacgccgctacgcgccgc 1183
|||||||| | |||||||
Sbjct: 1154 gctacgccaccctgcgccgc 1173
|
