Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
exonuclease |
NC_016800 (Corynebacterium diphtheriae BH8) |
1e-108 |
100 |
|
DNA polymerase III, epsilon subunit-related 3'-5' exonuclease |
NC_017858 (Methylophaga sp. JAM7) |
1e-73 |
55 |
|
YacC protein |
NC_017508 (Marinobacter adhaerens HP15) |
3e-72 |
56 |
|
YacC protein |
NC_021918 (Cycloclasticus zancles 7-ME) |
9e-72 |
56 |
|
COG0847: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
NC_020180 (Enterobacter aerogenes EA1509E) |
2e-69 |
55 |
|
exonuclease family protein |
NC_017645 (Escherichia coli UMNK88) |
2e-69 |
55 |
|
exonuclease |
NC_016839 (Klebsiella pneumoniae HS11286) |
2e-69 |
55 |
|
3'-5' exonuclease |
NC_021815 (Salmonella enterica CFSAN001921) |
2e-69 |
55 |
|
exonuclease |
NC_009140 (Salmonella enterica SL254) |
2e-69 |
55 |
|
YacC |
NC_009837 (Escherichia coli APEC O1) |
2e-62 |
50 |
|
exonuclease |
NC_021813 (Salmonella enterica CFSAN002069) |
1e-61 |
52 |
|
hypothetical protein |
NC_017718 (Salmonella enterica SL1344) |
1e-61 |
52 |
|
YacC |
NC_011081 (Salmonella enterica SL476) |
1e-61 |
52 |
|
YacC protein |
NC_017675 (Salmonella enterica ST4/74) |
1e-61 |
52 |
|
putative exoribonuclease YacC |
NC_011747 (Escherichia coli S88) |
6e-61 |
52 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_016800_R1' AND ph.id_pai_orf='18' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc