Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
VirD4 coupling protein |
NC_011498 (Helicobacter pylori P12) |
0.0 |
100 |
|
conjugal transfer protein TraG |
NC_019560 (Helicobacter pylori Aklavik117) |
0.0 |
99 |
|
conjugal transfer protein (traG) |
NC_017379 (Helicobacter pylori Puno135) |
0.0 |
99 |
|
conjugal transfer protein TraG |
NC_017740 (Helicobacter pylori Shi169) |
0.0 |
99 |
|
conjugal transfer protein TraG |
NC_010698 (Helicobacter pylori Shi470) |
0.0 |
99 |
|
conjugal transfer protein (traG) |
NC_017358 (Helicobacter pylori Cuz20) |
0.0 |
99 |
|
VirD4 coupling protein |
NC_017919 (Helicobacter pylori XZ274) |
0.0 |
99 |
|
VirD4 coupling protein |
NC_017926 (Helicobacter pylori XZ274) |
0.0 |
99 |
|
cag island DNA transfer protein |
NC_011333 (Helicobacter pylori G27) |
0.0 |
98 |
|
conjugal transfer protein (traG) |
NC_014555 (Helicobacter pylori PeCan4) |
0.0 |
99 |
|
conjugal transfer protein TraG |
NC_017739 (Helicobacter pylori Shi417) |
0.0 |
98 |
|
VirD4 coupling protein |
NC_017371 (Helicobacter pylori Gambia94/24) |
0.0 |
98 |
|
VirD4 coupling protein |
NC_014560 (Helicobacter pylori SJM180) |
0.0 |
98 |
|
putative conjugal transfer protein |
NC_017374 (Helicobacter pylori 2017) |
0.0 |
97 |
|
conjugal transfer protein |
NC_017381 (Helicobacter pylori 2018) |
0.0 |
97 |
|
hypothetical protein |
NC_017357 (Helicobacter pylori 908) |
0.0 |
97 |
|
type IV secretory system Conjugative DNA transfer family protein |
NC_022130 (Helicobacter pylori SouthAfrica20) |
0.0 |
99 |
|
VirD4 coupling protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
0.0 |
99 |
|
conjugal transfer protein (traG) |
NC_017376 (Helicobacter pylori Santal49) |
0.0 |
99 |
|
conjugal transfer protein TraG |
NC_021218 (Helicobacter pylori UM066) |
0.0 |
98 |
|
conjugal transfer protein |
NC_017367 (Helicobacter pylori F57) |
0.0 |
98 |
|
VirD4 coupling protein |
NC_017735 (Helicobacter cetorum MIT 99-5656) |
0.0 |
70 |
|
conjugal transfer protein TraG |
NC_017735 (Helicobacter cetorum MIT 99-5656) |
0.0 |
69 |
|
cag island DNA transfer protein |
NC_017737 (Helicobacter cetorum MIT 00-7128) |
3e-176 |
66 |
|
conjugal transfer protein (traG) |
NC_017363 (Helicobacter pylori Lithuania75) |
3e-173 |
64 |
|
conjugal transfer protein (traG) |
NC_017361 (Helicobacter pylori SouthAfrica7) |
7e-173 |
64 |
|
VirD4 coupling protein |
NC_019560 (Helicobacter pylori Aklavik117) |
1e-132 |
53 |
|
VirD4 coupling protein |
NC_017372 (Helicobacter pylori India7) |
3e-131 |
53 |
|
conjugal transfer protein (traG) |
NC_015674 (Helicobacter bizzozeronii CIII-1) |
1e-130 |
54 |
|
type IV secretion system protein VirD4 |
NC_017741 (Helicobacter pylori Shi112) |
3e-130 |
53 |
|
type IV secretion system protein VirD4 |
NC_017739 (Helicobacter pylori Shi417) |
3e-130 |
53 |
|
type IV secretion system protein VirD4 |
NC_014256 (Helicobacter pylori B8) |
2e-121 |
51 |
|
VirD4 coupling protein |
NC_017371 (Helicobacter pylori Gambia94/24) |
9e-121 |
51 |
|
hypothetical protein |
NC_017761 (Helicobacter cinaedi PAGU611) |
5e-120 |
55 |
|
virD4 coupling protein |
NC_021217 (Helicobacter pylori UM037) |
7e-103 |
52 |
|
conjugal transfer protein |
NC_020508 (Helicobacter pylori OK113) |
2e-102 |
53 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_011498_P1' AND ph.id_pai_orf='18' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc