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Homologs of hrcR gene of NC_006834_P1

359

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrcR
( YP_198720.1 )

type III secretion system protein

NC_006834
(Xanthomonas oryzae KACC10331)

8e-96

100

2) XOO_0095
( YP_449124.1 )

type III secretion system protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

2e-89

100

3) epaP
( YP_001911274.1 )

type III secretion system protein

NC_010717
(Xanthomonas oryzae PXO99A)

2e-89

100

4) hrcR
( NP_640757.1 )

type III secretion system protein

NC_003919
(Xanthomonas axonopodis 306)

2e-88

5) hrcR
( YP_004849999.1 )

type III secretion system protein

NC_016010
(Xanthomonas axonopodis F1)

2e-88

6) XAC29_02060
( YP_007634905.1 )

type III secretion system protein YscR

NC_020800
(Xanthomonas axonopodis Xac29-1)

2e-88

7) hrcR
( YP_362153.1 )

type III secretion system protein

NC_007508
(Xanthomonas campestris 85-10)

2e-88

8) hrcR
( YP_007648827.1 )

HrcR protein

NC_020815
(Xanthomonas citri Aw12879)

2e-88

9) hrcR
( YP_005630680.1 )

type III secretion protein HrcR

NC_017267
(Xanthomonas oryzae BLS256)

9e-88

10) XC_3016
( YP_244084.1 )

type III secretion system protein

NC_007086
(Xanthomonas campestris 8004)

2e-86

11) hrcR
( NP_636600.1 )

type III secretion system protein

NC_003902
(Xanthomonas campestris ATCC 33913)

2e-86

12) xccb100_3079
( YP_001904484.1 )

type III secretion system protein

NC_010688
(Xanthomonas campestris B100)

2e-86

13) hrcR
( YP_005636495.1 )

type III secretion protein HrcR

NC_017271
(Xanthomonas campestris 756C)

2e-86

14) F504_4358
( YP_008238087.1 )

Type III secretion inner membrane protein (YscR)

NC_021745
(Ralstonia solanacearum FQY_4)

2e-74

15) hrcR
( NP_522421.1 )

type III secretion system protein

NC_003296
(Ralstonia solanacearum GMI1000)

2e-74

16) hrcR
( YP_003749779.1 )

Hypersensitivity response secretion protein hrcR, type III secretion system

NC_014310
(Ralstonia solanacearum PSI07)

7e-74

17) hrcR
( YP_006032351.1 )

hrp protein hrcr

NC_017575
(Ralstonia solanacearum Po82)

9e-74

18) hrcR
( YP_004754990.1 )

type III secretion inner membrane protein

NC_015856
(Collimonas fungivorans Ter331)

9e-67

19) sctR
( YP_004022632.1 )

type III secretion inner membrane protein SctR

NC_014718
(Burkholderia rhizoxinica HKI 454)

1e-65

20) Acav_0515
( YP_004233005.1 )

Yop virulence translocation R

NC_015138
(Acidovorax avenae ATCC 19860)

2e-61

21) Aave_0449
( YP_968830.1 )

type III secretion system protein

NC_008752
(Acidovorax citrulli AAC00-1)

2e-61

22) Varpa_4985
( YP_004157256.1 )

yop virulence translocation r

NC_014931
(Variovorax paradoxus EPS)

1e-57

23) Rta_29680
( YP_004620091.1 )

translocation protein in type III secretion, membrane protein

NC_015677
(Ramlibacter tataouinensis TTB310)

6e-56

24) HCH_03263
( YP_434447.1 )

type III secretion system protein

NC_007645
(Hahella chejuensis KCTC 2396)

1e-51

25) Dvul_2984
( YP_961183.1 )

type III secretion system protein

NC_008741
(Desulfovibrio vulgaris DP4)

4e-50

26) DVUA0122
( YP_009162.1 )

type III secretion system protein

NC_005863
(Desulfovibrio vulgaris Hildenborough)

4e-50

27) Deval_3224
( YP_005704003.1 )

Yop virulence translocation R

NC_017311
(Desulfovibrio vulgaris RCH1)

4e-50

28) DvMF_2439
( YP_002436848.1 )

type III secretion system protein

NC_011769
(Desulfovibrio vulgaris Miyazaki F)

1e-49

29) yscR
( YP_004677245.1 )

Yop proteins translocation protein R

NC_015717
(Hyphomicrobium sp. MC1)

1e-49

30) NH44784_014541
( YP_008028549.1 )

Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

3e-46

31) sctR
( YP_007365636.1 )

type III secretion system protein

NC_020127
(Lawsonia intracellularis N343)

8e-45

32) SctR
( YP_594912.1 )

type III secretion system protein

NC_008011
(Lawsonia intracellularis PHE/MN1-00)

8e-45

33) yscR
( YP_436217.1 )

type III secretion system protein

NC_007645
(Hahella chejuensis KCTC 2396)

2e-44

34) STAUR_6328
( YP_003955912.1 )

type III secretion apparatus protein yscr/hrcr

NC_014623
(Stigmatella aurantiaca DW4/3-1)

2e-44

35) bscR
( YP_006967888.1 )

type III secretion protein

NC_019382
(Bordetella bronchiseptica 253)

3e-44

36) bscR
( YP_006899833.1 )

type III secretion protein

NC_018829
(Bordetella bronchiseptica MO149)

3e-44

37) bscR
( NP_888177.1 )

type III secretion system protein

NC_002927
(Bordetella bronchiseptica RB50)

3e-44

38) bscR
( NP_884486.1 )

type III secretion system protein

NC_002928
(Bordetella parapertussis 12822)

3e-44

39) bscR
( YP_006895376.1 )

type III secretion protein

NC_018828
(Bordetella parapertussis Bpp5)

3e-44

40) bscR
( YP_006625537.1 )

type III secretion protein

NC_018518
(Bordetella pertussis 18323)

3e-44

41) bscR
( YP_005590274.1 )

type III secretion system protein

NC_017223
(Bordetella pertussis CS)

3e-44

42) bscR
( NP_880884.1 )

type III secretion system protein

NC_002929
(Bordetella pertussis Tohama I)

3e-44

43) MXAN_5647
( YP_633786.1 )

type III secretion system protein

NC_008095
(Myxococcus xanthus DK 1622)

3e-44

44) USDA257_c21640
( YP_006397503.1 )

translocation protein y4yL

NC_018000
(Sinorhizobium fredii USDA 257)

1e-43

45) LILAB_35715
( YP_004670102.1 )

type III secretion system protein

NC_015711
(Myxococcus fulvus HW-1)

1e-43

46) rhcR
( YP_002824496.1 )

type III secretion system protein

NC_012586
(Sinorhizobium fredii NGR234)

2e-43

47) C770_GR4pC1264
( YP_007193547.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_019848
(Sinorhizobium meliloti GR4)

2e-43

48) rhcR
( NP_768459.1 )

type III secretion system protein

NC_004463
(Bradyrhizobium japonicum USDA 110)

3e-43

49) rhcR
( YP_005612838.1 )

RhcR protein

NC_017249
(Bradyrhizobium japonicum USDA 6)

3e-43

50) SFHH103_04957
( YP_005191562.1 )

RhcR-like, type III secretion system

NC_016815
(Sinorhizobium fredii HH103)

3e-43

51) yscR
( YP_005082209.1 )

Yop proteins translocation protein R

NC_016642
(Pseudovibrio sp. FO-BEG1)

3e-42

52) PADK2_17235
( YP_006483428.1 )

type III secretion system protein YscR

NC_018080
(Pseudomonas aeruginosa DK2)

1e-41

53) pscR
( YP_005975938.1 )

type III secretion system protein

NC_017548
(Pseudomonas aeruginosa M18)

1e-41

54) pscR
( YP_005980835.1 )

type III secretion system protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

1e-41

55) pscR
( NP_250384.1 )

type III secretion system protein

NC_002516
(Pseudomonas aeruginosa PAO1)

1e-41

56) ssaR
( YP_008132244.1 )

flagellar biosynthesis protein FliP

NC_021577
(Pseudomonas aeruginosa RP73)

1e-41

57) pscR
( YP_791552.1 )

type III secretion system protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

1e-41

58) G655_16715
( YP_007710183.1 )

type III secretion system protein YscR

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-41

59) S58_72190
( YP_007516770.1 )

type III secretion system protein YscR

NC_020453
(Bradyrhizobium oligotrophicum S58)

2e-41

60) fliP
( YP_005371584.1 )

type III secretion system protein

NC_017030
(Corallococcus coralloides DSM 2259)

2e-41

61) LILAB_19925
( YP_004666965.1 )

type III secretion system protein

NC_015711
(Myxococcus fulvus HW-1)

3e-41

62) MYSTI_02838
( YP_007359838.1 )

type III secretion system protein

NC_020126
(Myxococcus stipitatus DSM 14675)

5e-41

63) sctR
( YP_003708474.1 )

type III secretion inner membrane protein SctR

NC_014225
(Waddlia chondrophila WSU 86-1044)

2e-40

64) ascR
( YP_001144302.1 )

type III secretion system protein

NC_009350
(Aeromonas salmonicida A449)

2e-40

65) Sbal175_2391
( YP_006020948.1 )

Yop virulence translocation R

NC_017571
(Shewanella baltica BA175)

2e-40

66) Sbal117_2090
( YP_006037321.1 )

Yop virulence translocation R

NC_017579
(Shewanella baltica OS117)

2e-40

67) Sbal_1974
( YP_001050347.1 )

type III secretion system protein

NC_009052
(Shewanella baltica OS155)

2e-40

68) Sbal195_2278
( YP_001554706.1 )

type III secretion system protein

NC_009997
(Shewanella baltica OS195)

2e-40

69) Sbal678_2288
( YP_005273495.1 )

Yop virulence translocation R

NC_016901
(Shewanella baltica OS678)

2e-40

70) STAUR_3046
( YP_003952665.1 )

type III secretion system inner membrane p family protein

NC_014623
(Stigmatella aurantiaca DW4/3-1)

2e-40

71) MXAN_2447
( YP_630667.1 )

type III secretion system protein

NC_008095
(Myxococcus xanthus DK 1622)

2e-40

72) SVI_2230
( YP_003556979.1 )

type III secretion system EscR protein

NC_014012
(Shewanella violacea DSS12)

5e-40

73) pscR
( YP_002441218.1 )

type III secretion system protein

NC_011770
(Pseudomonas aeruginosa LESB58)

6e-40

74) Y11_35451
( YP_006007044.1 )

type III secretion inner membrane protein

NC_017564
(Yersinia enterocolitica Y11)

1e-39

75) REMIM1_PE00285
( YP_008368039.1 )

type III secretion system FliP/YscR family protein

NC_021909
(Rhizobium etli Mim1)

3e-39

76) ETAC_04225
( YP_007628336.1 )

type III secretion system protein YscR

NC_020796
(Edwardsiella tarda C07-087)

4e-39

77) esaR
( YP_003294936.1 )

type three secretion apparatus protein R

NC_013508
(Edwardsiella tarda EIB202)

4e-39

78) esaR
( YP_005698435.1 )

protein EsaR

NC_017309
(Edwardsiella tarda FL6-60)

4e-39

79) sctR
( YP_003039885.1 )

type iii secretion component protein sctr

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

5e-39

80) YE105_C0338
( YP_004296539.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_015224
(Yersinia enterocolitica 105.5R(r))

5e-39

81) Meso_0110
( YP_672680.1 )

type III secretion system protein

NC_008254
(Chelativorans sp. BNC1)

5e-39

82) hrcR
( YP_003774221.1 )

type III secretion HrcR transmembrane protein

NC_014323
(Herbaspirillum seropedicae SmR1)

5e-39

83) hrcR
( YP_001984354.1 )

type III secretion system protein

NC_010996
(Rhizobium etli CIAT 652)

7e-39

84) RHE_PD00059
( NP_659978.1 )

type III secretion system protein

NC_004041
(Rhizobium etli CFN 42)

1e-38

85) JCM7686_1775
( YP_008404643.1 )

type III secretion protein

NC_022041
(Paracoccus aminophilus JCM 7686)

2e-38

86) escR
( NP_902277.1 )

type III secretion system protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

2e-38

87) PSPPH_2535
( YP_274731.1 )

type III secretion system protein

NC_005773
(Pseudomonas syringae 1448A)

4e-38

88) sctR
( NP_930977.1 )

type III secretion system protein

NC_005126
(Photorhabdus luminescens TTO1)

1e-37

89) fliP1
( NP_991819.2 )

type III secretion system protein

NC_005810
(Yersinia pestis 91001)

1e-37

90) A1122_03785
( YP_005520452.1 )

type III secretion system protein YscR

NC_017168
(Yersinia pestis A1122)

1e-37

91) epaP
( YP_001608228.1 )

type III secretion system protein

NC_010159
(Yersinia pestis Angola)

1e-37

92) YPA_4012
( YP_653918.1 )

type III secretion system protein

NC_008150
(Yersinia pestis Antiqua)

1e-37

93) YPO0270
( YP_002345352.1 )

type III secretion system protein

NC_003143
(Yersinia pestis CO92)

1e-37

94) YPD4_0235
( YP_005503447.1 )

putative type III secretion apparatus protein

NC_017154
(Yersinia pestis D106004)

1e-37

95) YPD8_0240
( YP_005507323.1 )

putative type III secretion apparatus protein

NC_017160
(Yersinia pestis D182038)

1e-37

96) y0530
( NP_667867.1 )

type III secretion system protein

NC_004088
(Yersinia pestis KIM)

1e-37

97) YPN_3397
( YP_649324.1 )

type III secretion system protein

NC_008149
(Yersinia pestis Nepal516)

1e-37

98) YPDSF_3700
( YP_001165023.1 )

type III secretion system protein

NC_009381
(Yersinia pestis Pestoides F)

1e-37

99) YPZ3_0233
( YP_003566405.1 )

putative type III secretion apparatus protein

NC_014029
(Yersinia pestis Z176003)

1e-37

100) epaP
( YP_001402768.1 )

type III secretion system protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-37

101) YPTB0327
( YP_068873.2 )

type III secretion system protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

1e-37

102) YPTS_0351
( YP_001870797.1 )

type III secretion system protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

1e-37

103) YPK_3902
( YP_001722620.1 )

type III secretion system protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

1e-37

104) SG1305
( YP_454985.1 )

type III secretion system protein

NC_007712
(Sodalis glossinidius morsitans)

1e-37

105) YE105_P0026
( YP_004424928.1 )

type III secretion system protein

NC_015475
(Yersinia enterocolitica 105.5R(r))

3e-37

106) yscR
( YP_001004082.1 )

type III secretion system protein

NC_008791
(Yersinia enterocolitica 8081)

3e-37

107) Y11_p0741
( YP_006007922.1 )

type III secretion inner membrane protein

NC_017565
(Yersinia enterocolitica Y11)

3e-37

108) yscR
( NP_995367.1 )

type III secretion system protein

NC_005813
(Yersinia pestis 91001)

3e-37

109) yscR
( YP_001604476.1 )

type III secretion system protein

NC_010157
(Yersinia pestis Angola)

3e-37

110) YPA_CD0018
( YP_636810.1 )

type III secretion system protein

NC_008122
(Yersinia pestis Antiqua)

3e-37

111) yscR
( NP_395178.1 )

type III secretion system protein

NC_003131
(Yersinia pestis CO92)

3e-37

112) yscR
( YP_005503177.1 )

needle complex export protein

NC_017153
(Yersinia pestis D106004)

3e-37

113) yscR
( YP_005506960.1 )

needle complex export protein

NC_017157
(Yersinia pestis D182038)

3e-37

114) YPDSF_3973
( YP_001154602.1 )

type III secretion system protein

NC_009377
(Yersinia pestis Pestoides F)

3e-37

115) yscR
( YP_003560536.1 )

needle complex export protein

NC_014017
(Yersinia pestis Z176003)

3e-37

116) pYV0071
( YP_068480.1 )

type III secretion system protein

NC_006153
(Yersinia pseudotuberculosis IP 32953)

3e-37

117) YPTS_4289
( YP_001874689.1 )

type III secretion system protein

NC_010635
(Yersinia pseudotuberculosis PB1/+)

3e-37

118) MYSTI_06240
( YP_007363197.1 )

type III secretion system protein

NC_020126
(Myxococcus stipitatus DSM 14675)

4e-37

119) SFHH103_04305
( YP_006575326.1 )

hypothetical protein

NC_018294
(Sinorhizobium fredii HH103)

1e-36

120) USDA257_p02850
( YP_006529157.1 )

putative translocation protein y4yL

NC_018179
(Sinorhizobium fredii USDA 257)

1e-36

121) rhcR
( NP_444164.1 )

type III secretion system protein

NC_000914
(Sinorhizobium fredii NGR234)

9e-37

122) fliP1
( YP_005372092.1 )

type III secretion system protein

NC_017030
(Corallococcus coralloides DSM 2259)

2e-36

123) mlr8766
( NP_106869.1 )

type III secretion system protein

NC_002678
(Mesorhizobium loti MAFF303099)

4e-36

124) C770_GR4pB210
( YP_007192280.1 )

Type III secretory pathway, component EscR

NC_019847
(Sinorhizobium meliloti GR4)

4e-36

125) NT01EI_0960
( YP_002932408.1 )

type III secretion apparatus protein, YscR/HrcR family, putative

NC_012779
(Edwardsiella ictaluri 93-146)

5e-36

126) fliP
( NP_782262.1 )

flagellar biosynthesis protein FliP

NC_004557
(Clostridium tetani E88)

5e-36

127) rscR
( YP_002870380.1 )

type III secretion system protein

NC_012660
(Pseudomonas fluorescens SBW25)

6e-36

128) SARI_01563
( YP_001570599.1 )

type III secretion system protein

NC_010067
(Salmonella enterica RSK2980)

1e-35

129) ssaR
( YP_008265618.1 )

flagellar biosynthesis protein FliP

NC_021820
(Salmonella enterica 08-1736)

2e-35

130) ssaR
( YP_005237289.1 )

type III secretion system protein

NC_016856
(Salmonella enterica 14028S)

2e-35

131) ssaR
( YP_002226666.1 )

type III secretion system protein

NC_011274
(Salmonella enterica 287/91)

2e-35

132) SBOV14161
( YP_008505286.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_022241
(Salmonella enterica 3114)

2e-35

133) SEEH1578_16330
( YP_008247325.1 )

type III secretion system protein YscR

NC_021810
(Salmonella enterica 41578)

2e-35

134) yscR
( YP_005396816.1 )

type III secretion protein

NC_017046
(Salmonella enterica 798)

2e-35

135) SSPA1332
( YP_002142171.1 )

type III secretion system protein

NC_011147
(Salmonella enterica AKU12601)

2e-35

136) yscR
( YP_150685.1 )

type III secretion protein

NC_006511
(Salmonella enterica ATCC 9150)

2e-35

137) SU5_02035
( YP_006087669.1 )

Type III secretion inner membrane protein

NC_017623
(Salmonella enterica B182)

2e-35

138) ssaR
( YP_008480906.1 )

putative type III secretion protein

NC_022221
(Salmonella enterica CDC1983-67)

2e-35

139) ssaR
( YP_008308803.1 )

flagellar biosynthesis protein FliP

NC_021844
(Salmonella enterica CFSAN000189)

2e-35

140) ssaR
( YP_008255384.1 )

flagellar biosynthesis protein FliP

NC_021814
(Salmonella enterica CFSAN001921)

2e-35

141) CFSAN001992_04495
( YP_007470657.1 )

type III secretion system protein YscR

NC_020307
(Salmonella enterica CFSAN001992)

2e-35

142) ssaR
( YP_008260609.1 )

flagellar biosynthesis protein FliP

NC_021818
(Salmonella enterica CFSAN002050)

2e-35

143) ssaR
( YP_008249241.1 )

flagellar biosynthesis protein FliP

NC_021812
(Salmonella enterica CFSAN002069)

2e-35

144) epaP
( YP_002215713.1 )

type III secretion system protein

NC_011205
(Salmonella enterica CT_02021853)

2e-35

145) epaP
( YP_002114432.1 )

type III secretion system protein

NC_011094
(Salmonella enterica CVM19633)

2e-35

146) STMMW_14241
( YP_005232478.1 )

putative type III secretion protein

NC_016854
(Salmonella enterica D23580)

2e-35

147) ssaR
( NP_460384.1 )

type III secretion system protein

NC_003197
(Salmonella enterica LT2)

2e-35

148) ssaR
( YP_002243726.1 )

type III secretion system protein

NC_011294
(Salmonella enterica P125109)

2e-35

149) yscR
( YP_002637868.1 )

type III secretion system protein

NC_012125
(Salmonella enterica RKS4594)

2e-35

150) ssaR
( YP_005212444.1 )

putative type III secretion protein

NC_016831
(Salmonella enterica RKS5078)

2e-35

151) ssaR
( YP_008380650.1 )

flagellar biosynthesis protein FliP

NC_021984
(Salmonella enterica S06004)

2e-35

152) ssaR
( YP_216427.1 )

type III secretion system protein

NC_006905
(Salmonella enterica SC-B67)

2e-35

153) SPAB_01906
( YP_001588129.1 )

type III secretion system protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-35

154) yscR
( YP_005181263.1 )

putative type III secretion protein

NC_016810
(Salmonella enterica SL1344)

2e-35

155) epaP
( YP_002040671.1 )

type III secretion system protein

NC_011080
(Salmonella enterica SL254)

2e-35

156) epaP
( YP_002045422.1 )

type III secretion system protein

NC_011083
(Salmonella enterica SL476)

2e-35

157) epaP
( YP_002146623.1 )

type III secretion system protein

NC_011149
(Salmonella enterica SL483)

2e-35

158) ssaR
( YP_005242320.1 )

type III secretion system protein

NC_016857
(Salmonella enterica ST4/74)

2e-35

159) STMDT12_C14350
( YP_005247131.1 )

type III secretion system protein

NC_016860
(Salmonella enterica T000240)

2e-35

160) STU288_03415
( YP_007901788.1 )

type III secretion system protein YscR

NC_021151
(Salmonella enterica U288)

2e-35

161) ssaR
( YP_005251923.1 )

type III secretion system protein

NC_016863
(Salmonella enterica UK-1)

2e-35

162) SN31241_24890
( YP_008360405.1 )

Virulence protein yscR

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-35

163) escR
( YP_003232138.1 )

type III secretion system protein

NC_013361
(Escherichia coli 11368)

4e-35

164) escR
( YP_003223490.1 )

T3SS structure protein EscR

NC_013353
(Escherichia coli 12009)

4e-35

165) ECs4583
( NP_312610.1 )

type III secretion system protein

NC_002695
(Escherichia coli Sakai)

4e-35

166) yscR
( NP_456109.1 )

putative type III secretion protein

NC_003198
(Salmonella enterica CT18)

4e-35

167) STBHUCCB_13770
( YP_005216935.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

4e-35

168) yscR
( NP_805090.1 )

type III secretion system protein

NC_004631
(Salmonella enterica Ty2)

4e-35

169) TY21A_06540
( YP_007925612.1 )

type III secretion system protein

NC_021176
(Salmonella enterica Ty21a)

4e-35

170) escR
( YP_003236103.1 )

T3SS structure protein EscR

NC_013364
(Escherichia coli 11128)

5e-35

171) escR
( YP_003501889.1 )

type III secretion system EscR protein

NC_013941
(Escherichia coli CB9615)

5e-35

172) escR
( YP_002331425.1 )

type III secretion system protein

NC_011601
(Escherichia coli E2348/69)

5e-35

173) epaP
( YP_002273179.1 )

type III secretion system protein

NC_011353
(Escherichia coli EC4115)

5e-35

174) escR
( NP_290283.1 )

type III secretion system protein

NC_002655
(Escherichia coli EDL933)

5e-35

175) ECO55CA74_21290
( YP_006161363.1 )

type III secretion system protein YscR

NC_017656
(Escherichia coli RM12579)

5e-35

176) escR
( YP_003080495.1 )

type III secretion system protein

NC_013008
(Escherichia coli TW14359)

5e-35

177) CDCO157_4318
( YP_006315183.1 )

type III secretion system protein

NC_017906
(Escherichia coli Xuzhou21)

5e-35

178) ssaR
( YP_002924940.1 )

type III secretion system protein

NC_012751
(Candidatus Hamiltonella defensa T5A)

1e-34

179) H045_00190
( YP_007395610.1 )

type III secretion system protein YscR

NC_020209
(Pseudomonas poae RE*1-1-14)

3e-34

180) fliP
( YP_003711940.1 )

flagellar biosynthesis protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

3e-34

181) CPK_ORF00233
( YP_005662606.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_017285
(Chlamydophila pneumoniae LPCoLN)

1e-33

182) fliP
( YP_002796342.1 )

flagellar biosynthesis protein FliP

NC_012559
(Laribacter hongkongensis HLHK9)

4e-34

183) escR
( YP_003366517.1 )

T3SS structural protein EscR

NC_013716
(Citrobacter rodentium ICC168)

4e-34

184) Calkro_0478
( YP_004023197.1 )

flagellar biosynthetic protein flip

NC_014720
(Caldicellulosiruptor kronotskyensis 2002)

5e-34

185) CP1046
( NP_445583.1 )

type III secretion system protein

NC_002179
(Chlamydophila pneumoniae AR39)

6e-34

186) yscR
( NP_225020.1 )

type III secretion system protein

NC_000922
(Chlamydophila pneumoniae CWL029)

6e-34

187) yscR
( NP_300882.1 )

type III secretion system protein

NC_002491
(Chlamydophila pneumoniae J138)

6e-34

188) yscR
( NP_877126.1 )

type III secretion system protein

NC_005043
(Chlamydophila pneumoniae TW-183)

6e-34

189) Calhy_0599
( YP_003991709.1 )

flagellar biosynthetic protein flip

NC_014652
(Caldicellulosiruptor hydrothermalis 108)

7e-34

190) Calla_1939
( YP_004799490.1 )

flagellar biosynthetic protein FliP

NC_015949
(Caldicellulosiruptor lactoaceticus 6A)

7e-34

191) Calkr_0422
( YP_004025586.1 )

flagellar biosynthetic protein flip

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

8e-34

192) Athe_2157
( YP_002574005.1 )

flagellar biosynthetic protein FliP

NC_012034
(Caldicellulosiruptor bescii DSM 6725)

1e-33

193) fliP
( YP_004751609.1 )

flagellar biosynthesis protein

NC_015856
(Collimonas fungivorans Ter331)

2e-33

194) fliP
( YP_004846442.1 )

flagellar biosynthetic protein FliP

NC_016002
(Pseudogulbenkiania sp. NH8B)

2e-33

195) fliP
( YP_003041460.1 )

flagellar biosynthetic protein flip precursor

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

3e-33

196) sctR
( YP_004670658.1 )

type III secretion integral inner membrane protein

NC_015713
(Simkania negevensis Z)

1e-32

197) hrcR
( YP_003539968.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

1e-32

198) hcrR
( YP_003529886.1 )

Harpin secretion protein HrcR

NC_013961
(Erwinia amylovora CFBP1430)

1e-32

199) hrcR
( YP_001906463.1 )

type III secretion system protein

NC_010694
(Erwinia tasmaniensis Et1/99)

9e-33

200) hcrR
( YP_005804091.1 )

Harpin secretion protein HrcR

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-32

201) hrcR
( YP_002650074.1 )

type III secretion system protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-32

202) hrcR
( YP_005818255.1 )

type III secretion system protein

NC_017445
(Erwinia sp. Ejp617)

1e-32

203) fliP
( YP_359852.1 )

flagellar biosynthesis protein FliP

NC_007503
(Carboxydothermus hydrogenoformans Z-2901)

2e-32

204) fliP
( YP_514993.1 )

type III secretion system protein

NC_007899
(Chlamydophila felis Fe/C-56)

2e-32

205) H650_09085
( YP_008107643.1 )

flagellar biosynthesis protein FliP

NC_021500
(Enterobacter sp. R4-368)

4e-32

206) Desku_1772
( YP_004517141.1 )

flagellar biosynthetic protein FliP

NC_015573
(Desulfotomaculum kuznetsovii DSM 6115)

5e-32

207) fliP
( YP_001394554.1 )

flagellar biosynthesis protein FliP

NC_009706
(Clostridium kluyveri DSM 555)

5e-32

208) fliP
( YP_002471527.1 )

flagellar biosynthesis protein FliP

NC_011837
(Clostridium kluyveri NBRC 12016)

5e-32

209) fliP
( YP_587429.1 )

flagellar biosynthesis protein FliP

NC_007974
(Cupriavidus metallidurans CH34)

5e-32

210) M301_1012
( YP_003673973.1 )

flagellar biosynthetic protein FliP

NC_014207
(Methylotenera versatilis 301)

5e-32

211) fliP
( YP_004303272.1 )

flagellar transport protein FliP

NC_015259
(Polymorphum gilvum SL003B-26A1)

1e-31

212) S70_18345
( YP_006218162.1 )

flagellar biosynthesis protein FliP

NC_017731
(Providencia stuartii MRSN 2154)

6e-32

213) Tmar_0992
( YP_004101832.1 )

flagellar biosynthetic protein FliP

NC_014831
(Thermaerobacter marianensis DSM 12885)

6e-32

214) NT01EI_2431
( YP_002933836.1 )

flagellar biosynthetic protein FliP, putative

NC_012779
(Edwardsiella ictaluri 93-146)

1e-31

215) rscR
( YP_006322231.1 )

type III secretion protein RscR

NC_017911
(Pseudomonas fluorescens A506)

1e-31

216) ETAC_10205
( YP_007629522.1 )

Flagellar biosynthesis protein FliP

NC_020796
(Edwardsiella tarda C07-087)

2e-31

217) fliP
( YP_003296198.1 )

flagellar biosynthesis pathway protein FliP

NC_013508
(Edwardsiella tarda EIB202)

2e-31

218) fliP
( YP_005699542.1 )

Flagellar biosynthesis protein FliP

NC_017309
(Edwardsiella tarda FL6-60)

2e-31

219) Daud_1753
( YP_001717881.1 )

flagellar biosynthetic protein FliP

NC_010424
(Candidatus Desulforudis audaxviator MP104C)

2e-31

220) fliP
( YP_003496926.1 )

flagellar transport protein FliP

NC_013939
(Deferribacter desulfuricans SSM1)

2e-31

221) HrcR
( YP_234300.1 )

type III secretion system protein

NC_007005
(Pseudomonas syringae B728a)

3e-31

222) fliP
( NP_419767.1 )

flagellar biosynthesis protein FliP

NC_002696
(Caulobacter crescentus CB15)

3e-31

223) fliP
( YP_002516375.1 )

flagellar biosynthesis protein FliP

NC_011916
(Caulobacter crescentus NA1000)

3e-31

224) Adeg_2033
( YP_003239961.1 )

flagellar biosynthetic protein FliP

NC_013385
(Ammonifex degensii KC4)

5e-31

225) hrcR
( YP_273544.2 )

type III secretion system protein

NC_005773
(Pseudomonas syringae 1448A)

6e-31

226) ENC_28610
( YP_007846393.1 )

flagellar biosynthetic protein FliP

NC_021046
(Enterobacter cloacae NCTC 9394)

6e-31

227) fliP
( YP_546076.1 )

flagellar biosynthesis protein FliP

NC_007947
(Methylobacillus flagellatus KT)

6e-31

228) fliP
( YP_005801745.1 )

flagellar biosynthetic protein FliP

NC_017390
(Erwinia pyrifoliae DSM 12163)

6e-31

229) fliP
( YP_002647972.1 )

flagellar biosynthetic protein FliP

NC_012214
(Erwinia pyrifoliae Ep1/96)

6e-31

230) A3UG_14735
( YP_006478375.1 )

Flagellar biosynthetic protein FliP

NC_018079
(Enterobacter cloacae SDM)

7e-31

231) fliP
( YP_001682992.1 )

flagellar biosynthesis protein FliP

NC_010338
(Caulobacter sp. K31)

7e-31

232) fliP
( YP_003539639.1 )

flagellar biosynthetic protein

NC_013971
(Erwinia amylovora ATCC 49946)

1e-30

233) fliP3
( YP_003532039.1 )

flagellar biosynthetic protein FliP

NC_013961
(Erwinia amylovora CFBP1430)

1e-30

234) Hore_16720
( YP_002509417.1 )

flagellar biosynthetic protein FliP

NC_011899
(Halothermothrix orenii H 168)

1e-30

235) fliP
( YP_006032632.1 )

flagellar biosynthetic protein flip

NC_017575
(Ralstonia solanacearum Po82)

1e-30

236) fliP
( YP_003749322.1 )

fliP: flagellar biosynthesis protein. fliP/mopC/spaP family

NC_014310
(Ralstonia solanacearum PSI07)

1e-30

237) fliP
( YP_003613775.1 )

Flagellar biosynthetic protein FliP

NC_014121
(Enterobacter cloacae ATCC 13047)

7e-31

238) fliP
( YP_005816715.1 )

Flagellar biosynthetic protein FliP

NC_017445
(Erwinia sp. Ejp617)

8e-31

239) hrcR
( NP_791222.3 )

type III secretion protein HrcR

NC_004578
(Pseudomonas syringae DC3000)

9e-31

240) fliP
( YP_001726333.1 )

flagellar biosynthesis protein FliP

NC_010468
(Escherichia coli ATCC 8739)

9e-31

241) hscR
( YP_003811251.1 )

type III secretory pathway protein

NC_014366
(gamma proteobacterium HdN1)

2e-30

242) fliP
( YP_008237688.1 )

Flagellar biosynthesis protein FliP

NC_021745
(Ralstonia solanacearum FQY_4)

2e-30

243) fliP
( NP_521936.1 )

flagellar biosynthesis protein FliP

NC_003296
(Ralstonia solanacearum GMI1000)

2e-30

244) fliP
( YP_315368.1 )

flagellar biosynthesis protein FliP

NC_007404
(Thiobacillus denitrificans ATCC 25259)

3e-30

245) Mahau_0870
( YP_004462890.1 )

flagellar biosynthetic protein FliP

NC_015520
(Mahella australiensis 50-1 BON)

4e-30

246) B595_1074
( YP_006733619.1 )

fliP family protein

NC_018619
(Chlamydia psittaci 84/55)

6e-30

247) B711_1071
( YP_006740016.1 )

fliP family protein

NC_018625
(Chlamydia psittaci CP3)

6e-30

248) B600_1069
( YP_006735770.1 )

fliP family protein

NC_018621
(Chlamydia psittaci VS225)

6e-30

249) fliP
( YP_001361416.1 )

flagellar biosynthesis protein FliP

NC_009664
(Kineococcus radiotolerans SRS30216)

2e-29

250) MU9_1792
( YP_007505211.1 )

Flagellar biosynthesis protein FliP

NC_020418
(Morganella morganii KT)

3e-29

251) PSE_4083
( YP_005082609.1 )

flagellar biosynthesis protein FliP

NC_016642
(Pseudovibrio sp. FO-BEG1)

3e-29

252) fliP
( YP_512120.1 )

flagellar biosynthesis protein FliP

NC_007802
(Jannaschia sp. CCS1)

1e-28

253) Halha_0669
( YP_007314735.1 )

flagellar biosynthetic protein FliP

NC_019978
(Halobacteroides halobius DSM 5150)

1e-28

254) fliP
( YP_005093325.1 )

flagellar biosynthesis protein FliP

NC_016745
(Oceanimonas sp. GK1)

1e-28

255) Sulku_1113
( YP_004059976.1 )

flagellar biosynthetic protein flip

NC_014762
(Sulfuricurvum kujiense DSM 16994)

1e-28

256) B649_04650
( YP_007527939.1 )

hypothetical protein

NC_020505
(uncultured Sulfuricurvum sp. RIFRC-1)

1e-28

257) fliP
( YP_001499953.1 )

flagellar biosynthesis protein FliP

NC_009901
(Shewanella pealeana ATCC 700345)

3e-28

258) Tlie_0100
( YP_004931943.1 )

flagellar biosynthetic protein FliP

NC_016148
(Thermovirga lienii DSM 17291)

3e-28

259) Tsac_1796
( YP_006392401.1 )

flagellar biosynthetic protein FliP

NC_017992
(Thermoanaerobacterium saccharolyticum JW/SL-YS485)

6e-28

260) Sked_31060
( YP_003315837.1 )

flagellar biosynthetic protein FliP

NC_013521
(Sanguibacter keddieii DSM 10542)

1e-27

261) fliP
( YP_001141197.1 )

flagellar biosynthesis protein FliP

NC_009348
(Aeromonas salmonicida A449)

1e-27

262) Jden_2011
( YP_003161952.1 )

flagellar biosynthetic protein FliP

NC_013174
(Jonesia denitrificans DSM 20603)

1e-27

263) fliP
( YP_006747081.1 )

flagellar biosynthesis protein FliP

NC_018632
(Alteromonas macleodii ATCC 27126)

1e-27

264) fliP
( YP_006824044.1 )

flagellar biosynthesis protein FliP

NC_018692
(Alteromonas macleodii Black Sea 11)

1e-27

265) fliP
( YP_006798070.1 )

flagellar biosynthesis protein FliP

NC_018678
(Alteromonas macleodii English Channel 673)

1e-27

266) fliP
( YP_049816.1 )

flagellar biosynthesis protein FliP

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-27

267) Thexy_1317
( YP_004471022.1 )

flagellar biosynthetic protein FliP

NC_015555
(Thermoanaerobacterium xylanolyticum LX-11)

1e-27

268) Celgi_0475
( YP_004599565.1 )

flagellar biosynthetic protein FliP

NC_015671
(Cellvibrio gilvus ATCC 13127)

2e-27

269) fliP
( YP_002898876.1 )

flagellar biosynthesis protein FliP

NC_012695
(Burkholderia pseudomallei MSHR346)

2e-27

270) Dd1591_1885
( YP_003004214.1 )

type III secretion system protein

NC_012912
(Dickeya zeae Ech1591)

9e-28

271) fliP
( YP_076818.1 )

flagellar biosynthesis protein FliP

NC_006177
(Symbiobacterium thermophilum IAM 14863)

9e-28

272) fliP
( YP_006975941.1 )

flagellar biosynthesis protein FliP

NC_019393
(Alteromonas macleodii AltDE1)

2e-27

273) fliP
( YP_006801984.1 )

flagellar biosynthesis protein FliP

NC_018679
(Alteromonas macleodii Balearic Sea AD45)

2e-27

274) MADE_1005950
( YP_004426330.1 )

flagellar biosynthesis protein FliP

NC_011138
(Alteromonas macleodii Deep ecotype)

2e-27

275) fliP
( YP_008191968.1 )

flagellar biosynthesis protein FliP

NC_021716
(Alteromonas macleodii English Channel 615)

2e-27

276) fliP
( YP_008171083.1 )

flagellar biosynthesis protein FliP

NC_021710
(Alteromonas macleodii Ionian Sea U4)

2e-27

277) fliP
( YP_008195492.1 )

flagellar biosynthesis protein FliP

NC_021717
(Alteromonas macleodii Ionian Sea U7)

2e-27

278) fliP
( YP_008175213.1 )

flagellar biosynthesis protein FliP

NC_021712
(Alteromonas macleodii Ionian Sea U8)

2e-27

279) fliP
( YP_008183049.1 )

flagellar biosynthesis protein FliP

NC_021714
(Alteromonas macleodii Ionian Sea UM4b)

2e-27

280) fliP
( YP_008178996.1 )

flagellar biosynthesis protein FliP

NC_021713
(Alteromonas macleodii Ionian Sea UM7)

2e-27

281) fliP
( YP_004467968.1 )

flagellar biosynthesis protein FliP

NC_015554
(Alteromonas sp. SN2)

2e-27

282) Dd586_1882
( YP_003333446.1 )

Yop virulence translocation R

NC_013592
(Dickeya dadantii Ech586)

3e-27

283) PC1_2585
( YP_003018152.1 )

flagellar biosynthetic protein FliP

NC_012917
(Pectobacterium carotovorum PC1)

3e-27

284) fliP
( YP_004833415.1 )

flagellar biosynthetic protein FliP

NC_015976
(Sphingobium sp. SYK-6)

3e-27

285) fliP
( YP_393530.1 )

flagellar biosynthesis protein FliP

NC_007575
(Sulfurimonas denitrificans ATCC 33889)

3e-27

286) fliP
( YP_855914.1 )

flagellar biosynthesis protein FliP

NC_008570
(Aeromonas hydrophila ATCC 7966)

4e-27

287) fliP
( YP_007893385.1 )

flagellar biosynthetic protein

NC_021149
(Azotobacter vinelandii CA)

4e-27

288) fliP
( YP_007898434.1 )

flagellar biosynthetic protein

NC_021150
(Azotobacter vinelandii CA6)

4e-27

289) fliP
( YP_002799575.1 )

flagellar biosynthetic protein

NC_012560
(Azotobacter vinelandii DJ)

4e-27

290) Thein_0183
( YP_004625032.1 )

flagellar biosynthetic protein FliP

NC_015681
(Thermodesulfatator indicus DSM 15286)

4e-27

291) W5S_1792
( YP_006282755.1 )

Flagellar biosynthetic protein FliP

NC_017845
(Pectobacterium sp. SCC3193)

4e-27

292) fliP
( YP_003259269.1 )

flagellar biosynthesis protein FliP

NC_013421
(Pectobacterium wasabiae WPP163)

4e-27

293) fliP
( YP_001676432.1 )

flagellar biosynthesis protein FliP

NC_010334
(Shewanella halifaxensis HAW-EB4)

5e-27

294) hrcR
( YP_050174.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

5e-27

295) fliP
( YP_008042621.1 )

flagellar biosynthesis protein FliP

NC_021290
(Aeromonas hydrophila ML09-119)

5e-27

296) swp_5086
( YP_002314288.1 )

Flagellar transport protein FliP

NC_011566
(Shewanella piezotolerans WP3)

1e-26

297) PCC21_026900
( YP_006647346.1 )

flagellar biosynthesis protein FliP

NC_018525
(Pectobacterium carotovorum PCC21)

1e-26

298) Ser39006_2919
( YP_008523301.1 )

Yop virulence translocation R

NC_022268
(Serratia sp. ATCC 39006)

1e-26

299) B565_1109
( YP_004391761.1 )

flagellar biosynthetic protein FliP

NC_015424
(Aeromonas veronii B565)

7e-27

300) PC1_2212
( YP_003017787.1 )

Yop virulence translocation R

NC_012917
(Pectobacterium carotovorum PC1)

7e-27

301) PCC21_022910
( YP_006646947.1 )

type III secretion system protein

NC_018525
(Pectobacterium carotovorum PCC21)

7e-27

302) fliP
( YP_008112706.1 )

flagellar biosynthesis protein FliP

NC_021505
(Pseudomonas putida NBRC 14164)

9e-27

303) fliP
( YP_003516248.1 )

flagellar biosynthesis protein

NC_013949
(Helicobacter mustelae 12198)

2e-26

304) fliP
( YP_564662.1 )

flagellar biosynthesis protein FliP

NC_007954
(Shewanella denitrificans OS217)

3e-26

305) fliP
( YP_007955705.1 )

flagellar biosynthesis protein FliP

NC_021191
(Actinoplanes sp. N902-109)

4e-26

306) fliP
( YP_006822033.1 )

flagellar biosynthetic protein

NC_018691
(Alcanivorax dieselolei B5)

5e-26

307) fliP
( YP_001953516.1 )

flagellar biosynthesis protein FliP

NC_010814
(Geobacter lovleyi SZ)

1e-25

308) fliP
( NP_348768.1 )

flagellar biosynthesis protein FliP

NC_003030
(Clostridium acetobutylicum ATCC 824)

7e-26

309) fliP
( YP_004636814.1 )

flagellar biosynthesis protein FliP

NC_015687
(Clostridium acetobutylicum DSM 1731)

7e-26

310) fliP
( YP_005671296.1 )

flagellar biosynthesis protein FliP

NC_017295
(Clostridium acetobutylicum EA 2018)

7e-26

311) fliP
( YP_283989.1 )

flagellar biosynthesis protein FliP

NC_007298
(Dechloromonas aromatica RCB)

7e-26

312) Celf_0690
( YP_004452217.1 )

flagellar biosynthetic protein FliP

NC_015514
(Cellulomonas fimi ATCC 484)

2e-25

313) fliP
( YP_006765444.1 )

flagellar biosynthesis protein FliP

NC_018649
(Leptospirillum ferriphilum ML-04)

2e-25

314) fliP
( YP_003579610.1 )

flagellar biosynthetic protein FliP

NC_014034
(Rhodobacter capsulatus SB 1003)

2e-25

315) Sbal175_0426
( YP_006019027.1 )

flagellar biosynthetic protein FliP

NC_017571
(Shewanella baltica BA175)

3e-25

316) Sbal117_4142
( YP_006039292.1 )

flagellar biosynthetic protein FliP

NC_017579
(Shewanella baltica OS117)

3e-25

317) fliP
( YP_001052321.1 )

flagellar biosynthesis protein FliP

NC_009052
(Shewanella baltica OS155)

3e-25

318) fliP
( YP_001184990.1 )

flagellar biosynthesis protein FliP

NC_009438
(Shewanella putrefaciens CN-32)

6e-25

319) fliP
( YP_961863.1 )

flagellar biosynthesis protein FliP

NC_008750
(Shewanella sp. W3-18-1)

6e-25

320) fliP
( YP_001790062.1 )

flagellar biosynthesis protein FliP

NC_010524
(Leptothrix cholodnii SP-6)

8e-25

321) fliP
( YP_005093167.1 )

flagellar biosynthesis protein FliP

NC_016745
(Oceanimonas sp. GK1)

1e-24

322) fliP
( YP_001471824.1 )

flagellar biosynthesis protein FliP

NC_009831
(Shewanella sediminis HAW-EB3)

7e-25

323) Bcell_2487
( YP_004095475.1 )

flagellar biosynthetic protein FliP

NC_014829
(Bacillus cellulosilyticus DSM 2522)

2e-24

324) fliP
( YP_006370539.1 )

flagellar biosynthetic protein FliP

NC_017956
(Tistrella mobilis KA081020-065)

3e-24

325) fliP
( YP_006364962.1 )

flagellar transport protein FliP

NC_017955
(Modestobacter marinus BC501)

4e-24

326) fliP
( YP_003168989.1 )

flagellar biosynthesis protein FliP

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

5e-24

327) HP15_2312
( YP_005886004.1 )

flagellar biosynthesis protein FliP

NC_017506
(Marinobacter adhaerens HP15)

1e-23

328) Achl_2976
( YP_002489026.1 )

flagellar biosynthetic protein FliP

NC_011886
(Arthrobacter chlorophenolicus A6)

5e-23

329) fliP
( YP_959252.1 )

flagellar biosynthesis protein FliP

NC_008740
(Marinobacter aquaeolei VT8)

1e-22

330) fliP
( YP_005429221.1 )

flagellar biosynthesis protein

NC_017067
(Marinobacter hydrocarbonoclasticus ATCC 49840)

1e-22

331) PP1Y_AT34509
( YP_004535993.1 )

flagellar biosynthetic protein FliP

NC_015580
(Novosphingobium sp. PP1Y)

1e-22

332) fliP
( YP_001787969.1 )

flagellar biosynthesis protein FliP

NC_010520
(Clostridium botulinum Loch Maree)

2e-22

333) fliP
( YP_741821.1 )

flagellar biosynthesis protein FliP

NC_008340
(Alkalilimnicola ehrlichii MLHE-1)

1e-22

334) fliP
( YP_001782265.1 )

flagellar biosynthesis protein FliP

NC_010516
(Clostridium botulinum Okra)

3e-22

335) fliP
( YP_002863640.1 )

flagellar biosynthesis protein FliP

NC_012658
(Clostridium botulinum 657)

4e-22

336) fliP
( YP_001384893.1 )

flagellar biosynthesis protein FliP

NC_009697
(Clostridium botulinum ATCC 19397)

4e-22

337) fliP
( YP_001255147.1 )

flagellar biosynthesis protein FliP

NC_009495
(Clostridium botulinum ATCC 3502)

4e-22

338) H04402_02743
( YP_005679281.1 )

flagellar biosynthesis protein FliP

NC_017299
(Clostridium botulinum H04402 065)

4e-22

339) fliP
( YP_001388362.1 )

flagellar biosynthesis protein FliP

NC_009698
(Clostridium botulinum Hall)

4e-22

340) fliP
( YP_002805152.1 )

flagellar biosynthesis protein FliP

NC_012563
(Clostridium botulinum Kyoto)

4e-22

341) fliP
( YP_005675545.1 )

flagellar biosynthetic protein FliP

NC_017297
(Clostridium botulinum 230613)

1e-21

342) fliP
( YP_001391949.1 )

flagellar biosynthesis protein FliP

NC_009699
(Clostridium botulinum Langeland)

1e-21

343) Fbal_2331
( YP_003913608.1 )

flagellar biosynthetic protein FliP

NC_014541
(Ferrimonas balearica DSM 9799)

2e-21

344) Afer_0155
( YP_003108797.1 )

flagellar biosynthetic protein FliP

NC_013124
(Acidimicrobium ferrooxidans DSM 10331)

8e-21

345) fliP
( YP_617964.1 )

flagellar biosynthesis protein FliP

NC_008048
(Sphingopyxis alaskensis RB2256)

3e-20

346) fliP
( YP_001002073.1 )

flagellar biosynthesis protein FliP

NC_008789
(Halorhodospira halophila SL1)

3e-20

347) Mpop_0498
( YP_001923211.1 )

flagellar biosynthetic protein FliP

NC_010725
(Methylobacterium populi BJ001)

4e-19

348) fliP
( YP_921955.1 )

flagellar biosynthesis protein FliP

NC_008699
(Nocardioides sp. JS614)

5e-19

349) Metme_4070
( YP_004514922.1 )

flagellar biosynthetic protein FliP

NC_015572
(Methylomonas methanica MC09)

1e-17

350) fliP
( YP_007615500.1 )

flagellar biosynthesis protein FliP

NC_020561
(Sphingomonas sp. MM-1)

2e-17

351) Q7C_1257
( YP_006293094.1 )

flagellar biosynthesis protein FliP

NC_017856
(Methylophaga sp. JAM7)

2e-16

352) fliP
( YP_344152.1 )

flagellar biosynthesis protein FliP

NC_007484
(Nitrosococcus oceani ATCC 19707)

7e-16

353) fliP
( YP_934229.1 )

flagellar biosynthesis protein FliP

NC_008702
(Azoarcus sp. BH72)

2e-15

354) Nwat_0923
( YP_003760188.1 )

flagellar biosynthetic protein FliP

NC_014315
(Nitrosococcus watsonii C-113)

2e-15

355) fliP
( YP_002889886.1 )

flagellar biosynthesis protein FliP

NC_011662
(Thauera sp. MZ1T)

4e-15

356) Anae109_0745
( YP_001377942.1 )

type III secretion system protein

NC_009675
(Anaeromyxobacter sp. Fw109-5)

3e-13

357) R2APBS1_2987
( YP_007591297.1 )

flagellar biosynthetic protein FliP

NC_020541
(Rhodanobacter sp. 2APBS1)

5e-13

358) Nhal_3616
( YP_003529026.1 )

flagellar biosynthetic protein FliP

NC_013960
(Nitrosococcus halophilus Nc 4)

2e-11

359) lfiP
( YP_005436798.1 )

lateral flagellar export/assembly protein LfiP

NC_017075
(Rubrivivax gelatinosus IL144)

3e-08

• Sequence Alignments

1) hrcR in NC_006834


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  342 bits (1285),  Expect = 8e-96, Method: Compositional matrix adjust.
 Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MVCRSSACRRARMQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQV  60
            MVCRSSACRRARMQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQV
Sbjct  1    MVCRSSACRRARMQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQV  60

Query  61   PPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHT  120
            PPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHT
Sbjct  61   PPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHT  120

Query  121  PEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDL  180
            PEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDL
Sbjct  121  PEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDL  180

Query  181  VVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226
            VVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR
Sbjct  181  VVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

2) XOO_0095 in NC_007705


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  321 bits (1204),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 214/214 (100%), Positives = 214/214 (100%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  120
            VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

3) epaP in NC_010717


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  321 bits (1204),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 214/214 (100%), Positives = 214/214 (100%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  120
            VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

4) hrcR in NC_003919


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  317 bits (1190),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 210/214 (99%), Positives = 213/214 (99%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYGAGSDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSA  120
            VSCFVMAPVGMEAFKAAQNYGAGSDNSR+VVLLDACREPFRQFLLKHT EREKAFFMRSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKAATLKSDDLLVLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKA+TLKSDDLL+LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

5) hrcR in NC_016010


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  317 bits (1190),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 210/214 (99%), Positives = 213/214 (99%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYGAGSDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSA  120
            VSCFVMAPVGMEAFKAAQNYGAGSDNSR+VVLLDACREPFRQFLLKHT EREKAFFMRSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKAATLKSDDLLVLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKA+TLKSDDLL+LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

6) XAC29_02060 in NC_020800


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  317 bits (1190),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 210/214 (99%), Positives = 213/214 (99%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYGAGSDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSA  120
            VSCFVMAPVGMEAFKAAQNYGAGSDNSR+VVLLDACREPFRQFLLKHT EREKAFFMRSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKAATLKSDDLLVLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKA+TLKSDDLL+LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

7) hrcR in NC_007508


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  317 bits (1190),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 210/214 (99%), Positives = 213/214 (99%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYGAGSDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSA  120
            VSCFVMAPVGMEAFKAAQNYGAGSDNSR+VVLLDACREPFRQFLLKHT EREKAFFMRSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKAATLKSDDLLVLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKA+TLKSDDLL+LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

8) hrcR in NC_020815


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  317 bits (1190),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 210/214 (99%), Positives = 213/214 (99%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYGAGSDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSA  120
            VSCFVMAPVGMEAFKAAQNYGAGSDNSR+VVLLDACREPFRQFLLKHT EREKAFFMRSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKAATLKSDDLLVLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKA+TLKSDDLL+LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

9) hrcR in NC_017267


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  316 bits (1183),  Expect = 9e-88, Method: Compositional matrix adjust.
 Identities = 210/214 (99%), Positives = 213/214 (99%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAALVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAA+VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTREREKAFFMRSA  120
            VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHT EREKAFFMRSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKAATLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKA+TLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVAMDGWSILIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVAMDGWS+LIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

10) XC_3016 in NC_007086


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  312 bits (1168),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 204/214 (96%), Positives = 212/214 (99%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYSPGADNSRVVVLLDACREPFRQFLLKHTREREKAFFIRSA  120
            VSCFVMAPVGMEAFKAAQNY++G+DNSR+VVLLDACREPFRQFLLKHT EREKAFF+RSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKADTLKPDDLLVLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKA TLK+DDLL+LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVALDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVA+DGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

11) hrcR in NC_003902


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  312 bits (1168),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 204/214 (96%), Positives = 212/214 (99%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYSPGADNSRVVVLLDACREPFRQFLLKHTREREKAFFIRSA  120
            VSCFVMAPVGMEAFKAAQNY++G+DNSR+VVLLDACREPFRQFLLKHT EREKAFF+RSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKADTLKPDDLLVLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKA TLK+DDLL+LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVALDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVA+DGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

12) xccb100_3079 in NC_010688


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  312 bits (1168),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 204/214 (96%), Positives = 212/214 (99%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYSPGADNSRVVVLLDACREPFRQFLLKHTREREKAFFIRSA  120
            VSCFVMAPVGMEAFKAAQNY++G+DNSR+VVLLDACREPFRQFLLKHT EREKAFF+RSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKADTLKPDDLLVLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKA TLK+DDLL+LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVALDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVA+DGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

13) hrcR in NC_017271


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  311 bits (1167),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 203/214 (95%), Positives = 212/214 (99%), Gaps = 0/214 (0%)

Query  1    MQMPDvgslllvvimlgllPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  60
            MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAFKAAQNYSPGAENSRVVVLLDACREPFRQFLLKHTREREKAFFIRSA  120
            VSCFVMAPVGMEAFKAAQNY++G++NSR+VVLLDACREPFRQFLLKHT EREKAFF+RSA
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  121  QQIWPKDKADTLKPDDLLVLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  180
            QQIWPKDKA TLK+DDLL+LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  181  QVTPTNVAIPFKLLLFVALDGWSMLIHGLVLSYR  214
            QVTPTNVAIPFKLLLFVA+DGWSMLIHGLVLSYR
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

14) F504_4358 in NC_021745


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  271 bits (1015),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 157/217 (73%), Positives = 190/217 (88%), Gaps = 3/217 (1%)

Query  1    MQNVEFASLIVMAVAIALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMI  60
            MQ  + +SL+++ + ++LLPFAAMVVTSYTKIVVVLGLLRNA+GVQQVPPNMVLNG+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAMQRAHVQINAQGGTNITQVMPLLDAARDPFREFLNKHTNAREKAFFM  120
            VSCFVMAPVGMEA + A+   N  +G++ ++++ LLDA R+PFR+FL KHT  REKAFFM
Sbjct  73   VSCFVMAPVGMEAFKAAQ---NYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFM  129

Query  121  RSAQQLWPPAKAAQLKDDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMAL  180
            RSAQQ+WP  KA+ LK DDL++LAPAFTL+ELT AFRIGFLLYL FIVIDLV+AN LMA+
Sbjct  130  RSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAM  189

Query  181  GLSQVTPSNVAIPFKLLLFVVMDGWSVLIHGLVNTYR  217
            GLSQVTP+NVAIPFKLLLFV MDGWS+LIHGLV +YR
Sbjct  190  GLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

15) hrcR in NC_003296


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  271 bits (1015),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 157/217 (73%), Positives = 190/217 (88%), Gaps = 3/217 (1%)

Query  1    MQNVEFASLIVMAVAIALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMI  60
            MQ  + +SL+++ + ++LLPFAAMVVTSYTKIVVVLGLLRNA+GVQQVPPNMVLNG+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFVMAPVGMEAMQRAHVQINAQGGTNITQVMPLLDAARDPFREFLNKHTNAREKAFFM  120
            VSCFVMAPVGMEA + A+   N  +G++ ++++ LLDA R+PFR+FL KHT  REKAFFM
Sbjct  73   VSCFVMAPVGMEAFKAAQ---NYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFM  129

Query  121  RSAQQLWPPAKAAQLKDDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMAL  180
            RSAQQ+WP  KA+ LK DDL++LAPAFTL+ELT AFRIGFLLYL FIVIDLV+AN LMA+
Sbjct  130  RSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAM  189

Query  181  GLSQVTPSNVAIPFKLLLFVVMDGWSVLIHGLVNTYR  217
            GLSQVTP+NVAIPFKLLLFV MDGWS+LIHGLV +YR
Sbjct  190  GLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

16) hrcR in NC_014310


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  270 bits (1008),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 155/217 (72%), Positives = 190/217 (88%), Gaps = 3/217 (1%)

Query  1    MQNVEFASLIVMAVAIALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMI  60
            MQ  + +SL+++ + ++LLPFAAMVVTSYTKIVVVLGLLRNA+GVQQVPPNMVLNG+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFIMAPVGMEAMQRAHVQINAQGGTNITQVMPLLDAARDPFREFLNKHTNAREKAFFM  120
            VSCF+MAPVGMEA + A+   N  +G++ ++++ LLDA R+PFR+FL KHT  REKAFFM
Sbjct  73   VSCFVMAPVGMEAFKAAQ---NYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFM  129

Query  121  RSAQQLWPPAKAALLKDDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMAL  180
            RSAQQ+WP  KA+ LK DDL++LAPAFTL+ELT AFRIGFLLYL FIVIDLV+AN LMA+
Sbjct  130  RSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAM  189

Query  181  GLSQVTPSNVAIPFKLLLFVVMDGWSVLVHGLVNTYR  217
            GLSQVTP+NVAIPFKLLLFV MDGWS+L+HGLV +YR
Sbjct  190  GLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

17) hrcR in NC_017575


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  269 bits (1006),  Expect = 9e-74, Method: Compositional matrix adjust.
 Identities = 155/217 (72%), Positives = 190/217 (88%), Gaps = 3/217 (1%)

Query  1    MQNVEFASLIVMAVAIALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMI  60
            MQ  + +SL+++ + ++LLPFAAMVVTSYTKIVVVLGLLRNA+GVQQVPPNMVLNG+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   VSCFIMAPVGMEAMQRAHVQLNAQGGANITQVMPLLDAARDPFREFLNKHTNAREKAFFM  120
            VSCF+MAPVGMEA + A+   N  +G++ ++++ LLDA R+PFR+FL KHT  REKAFFM
Sbjct  73   VSCFVMAPVGMEAFKAAQ---NYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFM  129

Query  121  RSAQQLWPPAKAALLKEDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMAL  180
            RSAQQ+WP  KA+ LK DDL++LAPAFTL+ELT AFRIGFLLYL FIVIDLV+AN LMA+
Sbjct  130  RSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAM  189

Query  181  GLSQVTPSNVAIPFKLLLFVVMDGWSVLVHGLVNTYR  217
            GLSQVTP+NVAIPFKLLLFV MDGWS+L+HGLV +YR
Sbjct  190  GLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

18) bgla_2g02730 in NC_015376


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  258 bits (965),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 143/215 (67%), Positives = 187/215 (87%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLLVVIAISLLPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q +D+ +LLLVVI ++LLPF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSIYVMAPIGMQASKALEGQQLASQPSQALIQAFGAAKEPFRAFLVKHTAEREKRFFLRS  121
            VS +VMAP+GM+A KA +    +S+ S+ ++  ++A +EPFR FL+KHT+EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  AAVVWPKEQAQQLSENDLIVLAPSFTLSELTDAFKIGFLLYIAFIVVDLIIANVLLALGL  181
            A  +WPK++A  L  +DL++LAP+FTLSELT+AF+IGFLLY+ FIV+DL++AN L+A+GL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVTPTNVAIPFKLLLFVVMDGWSTLIHGLVMTYK  216
            +QVTPTNVAIPFKLLLFV MDGWS LIHGLV++Y+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

19) bglu_2g02340 in NC_012721


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  254 bits (947),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 142/215 (67%), Positives = 185/215 (87%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLLVVIAISLLPFVAMVVTSYAKVVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q +D+ +LLLVVI ++LLPF AMVVTSY+K+VVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYVMAPIGMQASKSLEGQQLASQPSQALIQAFGAAREPFRAFLEKHTQEREKRFFLRS  121
            VS +VMAP+GM+A K+ +    +S+ S+ ++  ++A REPFR FL KHT EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  AAVVWPKEQAQQLSEHDLIVLAPSFTLSELTDAFKIGFLLYIAFIVVDLIIANVLLALGL  181
            A  +WPK++A  L  +DL++LAP+FTLSELT+AF+IGFLLY+ FIV+DL++AN L+A+GL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVTPTNVAIPFKLLLFVVMDGWSTLIHGLVMTYK  216
            +QVTPTNVAIPFKLLLFV MDGWS LIHGLV++Y+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

20) Bamb_5861 in NC_008392


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  253 bits (944),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 139/217 (65%), Positives = 183/217 (85%), Gaps = 3/217 (1%)

Query  2    VQFSDLTGLLITVVAISLIPFVAMVATSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAVL  61
            +Q +D+ +LL+ V+ ++L+PF AMV TSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSAYVMAPIGMQAMQTMQTMHRTPGSDTSLVVLDAFDAAKEPFRAFLKKHAHEREKRFFV  121
            VS +VMAP+GM+A ++ Q    + + ++ +VVL  +DA +EPFR FL KH+ EREK FF+
Sbjct  73   VSCFVMAPVGMEAFKAAQN-YGAGSDNSRIVVL--LDACREPFRQFLLKHTPEREKAFFM  129

Query  122  RSATVVWPKDMAAKIREDDLIVLAPAFTLTEMADAFKIGFLLYIAFIVVDLVIANVLMAM  181
            RSA  +WPKD A+ ++ DDL++LAPAFTL+E+++AF+IGFLLY+ FIV+DLV+AN LMAM
Sbjct  130  RSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAM  189

Query  182  GLNQVQPTNVAIPFKLLLFVVMSGWSTLIHGLVMTYR  218
            GL+QV PTNVAIPFKLLLFV M GWS LIHGLV++YR
Sbjct  190  GLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

21) BamMC406_5644 in NC_010557


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  253 bits (944),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 139/217 (65%), Positives = 183/217 (85%), Gaps = 3/217 (1%)

Query  2    VQFSDLTGLLITVVAISLIPFVAMVATSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAVL  61
            +Q +D+ +LL+ V+ ++L+PF AMV TSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSAYVMAPIGMQAMQTMQTMHRTPGSDTSLVVLDAFDAAKEPFRAFLKKHAHEREKRFFV  121
            VS +VMAP+GM+A ++ Q    + + ++ +VVL  +DA +EPFR FL KH+ EREK FF+
Sbjct  73   VSCFVMAPVGMEAFKAAQN-YGAGSDNSRIVVL--LDACREPFRQFLLKHTPEREKAFFM  129

Query  122  RSATVVWPKDMAAKVREDDLIVLAPAFTLTEMADAFKIGFLLYIAFIVVDLVIANVLMAM  181
            RSA  +WPKD A+ ++ DDL++LAPAFTL+E+++AF+IGFLLY+ FIV+DLV+AN LMAM
Sbjct  130  RSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAM  189

Query  182  GLNQVQPTNVAIPFKLLLFVVMSGWSTLIHGLVMTYR  218
            GL+QV PTNVAIPFKLLLFV M GWS LIHGLV++YR
Sbjct  190  GLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

22) sctR in NC_017832


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  247 bits (923),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 147/215 (69%), Positives = 187/215 (87%), Gaps = 1/215 (0%)

Query  23   VQFSDITGLLLVVIAISLLPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  82
            +Q +D+ +LLLVVI ++LLPF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  83   VSLYVMAPIGMQAAKALDEqqlasqssqaiiqalgsaREPFRSFLEKHTPEREKRFFIRS  142
            VS +VMAP+GM+A KA  ++  A+  +  I+  L++ REPFR FL KHTPEREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKA-AQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  143  ASVIWPKEEASLLNERDLIVLAPAFALSELTDAFKIGFLLYIVFIIVDLVIANVLLALGL  202
            A  IWPK+ A+ L+  DL++LAPAF+LSELT+AF+IGFLLY+VFI++DLV+AN L+A+GL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  203  NQITPTNVAIPFKLLLFVAMDGWSTLIHGLVMTYK  237
            +Q+TPTNVAIPFKLLLFVAMDGWS LIHGLV++Y+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

23) yscR in NC_009078


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  247 bits (923),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 147/215 (69%), Positives = 187/215 (87%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLLVVIAISLLPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q +D+ +LLLVVI ++LLPF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYVMAPIGMQAAKALDEqqlasqssqaiiqalgsaREPFRSFLEKHTPEREKRFFIRS  121
            VS +VMAP+GM+A KA  ++  A+  +  I+  L++ REPFR FL KHTPEREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKA-AQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPKEEASLLNERDLIVLAPAFALSELTDAFKIGFLLYIVFIIVDLVIANVLLALGL  181
            A  IWPK+ A+ L+  DL++LAPAF+LSELT+AF+IGFLLY+VFI++DLV+AN L+A+GL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQITPTNVAIPFKLLLFVAMDGWSTLIHGLVMTYK  216
            +Q+TPTNVAIPFKLLLFVAMDGWS LIHGLV++Y+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

24) yscR in NC_007435


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  247 bits (923),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 147/215 (69%), Positives = 187/215 (87%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLLVVIAISLLPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q +D+ +LLLVVI ++LLPF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYVMAPIGMQAAKALDEqqlasqssqaiiqalgsaREPFRSFLEKHTPEREKRFFIRS  121
            VS +VMAP+GM+A KA  ++  A+  +  I+  L++ REPFR FL KHTPEREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKA-AQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPKEEASLLNERDLIVLAPAFALSELTDAFKIGFLLYIVFIIVDLVIANVLLALGL  181
            A  IWPK+ A+ L+  DL++LAPAF+LSELT+AF+IGFLLY+VFI++DLV+AN L+A+GL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQITPTNVAIPFKLLLFVAMDGWSTLIHGLVMTYK  216
            +Q+TPTNVAIPFKLLLFVAMDGWS LIHGLV++Y+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

25) yscR in NC_009075


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  247 bits (923),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 147/215 (69%), Positives = 187/215 (87%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLLVVIAISLLPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q +D+ +LLLVVI ++LLPF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYVMAPIGMQAAKALDEqqlasqssqaiiqalgsaREPFRSFLEKHTPEREKRFFIRS  121
            VS +VMAP+GM+A KA  ++  A+  +  I+  L++ REPFR FL KHTPEREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKA-AQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPKEEASLLNERDLIVLAPAFALSELTDAFKIGFLLYIVFIIVDLVIANVLLALGL  181
            A  IWPK+ A+ L+  DL++LAPAF+LSELT+AF+IGFLLY+VFI++DLV+AN L+A+GL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQITPTNVAIPFKLLLFVAMDGWSTLIHGLVMTYK  216
            +Q+TPTNVAIPFKLLLFVAMDGWS LIHGLV++Y+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

26) BPC006_II1889 in NC_018529


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  247 bits (923),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 147/215 (69%), Positives = 187/215 (87%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLLVVIAISLLPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q +D+ +LLLVVI ++LLPF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYVMAPIGMQAAKALDEqqlasqssqaiiqalgsaREPFRSFLEKHTPEREKRFFIRS  121
            VS +VMAP+GM+A KA  ++  A+  +  I+  L++ REPFR FL KHTPEREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKA-AQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPKEEASLLNERDLIVLAPAFALSELTDAFKIGFLLYIVFIIVDLVIANVLLALGL  181
            A  IWPK+ A+ L+  DL++LAPAF+LSELT+AF+IGFLLY+VFI++DLV+AN L+A+GL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQITPTNVAIPFKLLLFVAMDGWSTLIHGLVMTYK  216
            +Q+TPTNVAIPFKLLLFVAMDGWS LIHGLV++Y+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

27) sctR in NC_006351


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  247 bits (923),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 147/215 (69%), Positives = 187/215 (87%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLLVVIAISLLPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q +D+ +LLLVVI ++LLPF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYVMAPIGMQAAKALDEqqlasqssqaiiqalgsaREPFRSFLEKHTPEREKRFFIRS  121
            VS +VMAP+GM+A KA  ++  A+  +  I+  L++ REPFR FL KHTPEREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKA-AQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPKEEASLLNERDLIVLAPAFALSELTDAFKIGFLLYIVFIIVDLVIANVLLALGL  181
            A  IWPK+ A+ L+  DL++LAPAF+LSELT+AF+IGFLLY+VFI++DLV+AN L+A+GL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQITPTNVAIPFKLLLFVAMDGWSTLIHGLVMTYK  216
            +Q+TPTNVAIPFKLLLFVAMDGWS LIHGLV++Y+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

28) epaP in NC_021877


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  247 bits (923),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 147/215 (69%), Positives = 187/215 (87%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLLVVIAISLLPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q +D+ +LLLVVI ++LLPF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYVMAPIGMQAAKALDEqqlasqssqaiiqalgsaREPFRSFLEKHTPEREKRFFIRS  121
            VS +VMAP+GM+A KA  ++  A+  +  I+  L++ REPFR FL KHTPEREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKA-AQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPKEEASLLNERDLIVLAPAFALSELTDAFKIGFLLYIVFIIVDLVIANVLLALGL  181
            A  IWPK+ A+ L+  DL++LAPAF+LSELT+AF+IGFLLY+VFI++DLV+AN L+A+GL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQITPTNVAIPFKLLLFVAMDGWSTLIHGLVMTYK  216
            +Q+TPTNVAIPFKLLLFVAMDGWS LIHGLV++Y+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

29) hrcR in NC_015856


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  246 bits (918),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 140/191 (74%), Positives = 168/191 (88%), Gaps = 0/191 (0%)

Query  25   MVVTSYTKIVVVLGLLRNALGLQQVPPTSVLNGVAIIISCFVMAPVGMEAVKHAQLSSEQ  84
            MVVTSYTKIVVVLGLLRNA+G+QQVPP  VLNGVA+++SCFVMAPVGMEA K AQ  +  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  85   TAGSQIMPLFDAAREPFRTFLRKHTSEREKAFFMRSARQIWPPERAAELKPDDLIVLAPA  144
            +  S+I+ L+DA REPFR FL KHT+EREKAFFMRSA+QIWP ++A+ LK+DDL++LAPA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  145  FVLSELTAAFKIGFLLYLCFIVIDLVIANVLMALGLSQVNPSNVAIPFKLLLFISLDGWS  204
            F LSELT AF+IGFLLYL FIVIDLV+AN LMA+GLSQV P+NVAIPFKLLLF+++DGWS
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  205  TLVHGLISTYR  215
             L+HGL+ +YR
Sbjct  216  MLIHGLVLSYR  226

30) BC1003_3642 in NC_014540


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  245 bits (916),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 142/215 (67%), Positives = 188/215 (88%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLIVIVAISLVPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGVAIL  61
            +Q +D+ +LL+V++ ++L+PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNGVA+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSIYVMAPVgmqamqsmqgqaiagqPTQALIQVFSAAREPFRTFLQKHTNEREKRFFIRS  121
            VS +VMAPVGM+A ++ Q  + +++ ++ ++ ++ A REPFR FL KHT EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVV-LLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ANVVWPKEAASSLHENDLIVLAPAFTLTELTDAFKIGFLLYIAFIVIDLIIANVLLAMGL  181
            A+ +WPK+ A++L  +DL++LAPAFTL+ELT+AF+IGFLLY+ FIVIDL++AN L+AMGL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVTPTNVAIPFKLLLFVVMDGWSTLIHGLVMTYR  216
            +QVTPTNVAIPFKLLLFV MDGWS LIHGLV++YR
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

31) BC1001_6056 in NC_015137


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  244 bits (909),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 143/215 (67%), Positives = 188/215 (88%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLIVIVAISLVPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGVAIL  61
            +Q +D+ +LL+V++ ++L+PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNGVA+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYVMAPVgmqamqsmqgqaiagqPTQALIQVFSAAREPFRTFLQKHTNEREKRFFIRS  121
            VS +VMAPVGM+A ++ Q  + +++ ++ ++ ++ A REPFR FL KHT EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVV-LLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ANVVWPKDAAASLHENDLIVLAPAFTLTELTDAFKIGFLLYIAFIVIDLIIANVLLAMGL  181
            A+ +WPKD A++L  +DL++LAPAFTL+ELT+AF+IGFLLY+ FIVIDL++AN L+AMGL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVTPTNVAIPFKLLLFVVMDGWSTLIHGLVMTYR  216
            +QVTPTNVAIPFKLLLFV MDGWS LIHGLV++YR
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

32) BUPH_00158 in NC_018672


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  243 bits (908),  Expect = 6e-66, Method: Compositional matrix adjust.
 Identities = 142/215 (67%), Positives = 188/215 (88%), Gaps = 1/215 (0%)

Query  2    VQFSDITGLLIVIVAISLVPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGVAIL  61
            +Q +D+ +LL+V++ ++L+PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNGVA+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYVMAPVgmqamqsmqgqaiagqPTQALIQVFSTAREPFRTFLQKHTNEREKRFFIRS  121
            VS +VMAPVGM+A ++ Q  + +++ ++ ++ ++ + REPFR FL KHT EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVV-LLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ANVVWPKDAAASLHENDLIVLAPAFTLTELTDAFKIGFLLYIAFIVIDLIIANVLLAMGL  181
            A+ +WPKD A++L  +DL++LAPAFTL+ELT+AF+IGFLLY+ FIVIDL++AN L+AMGL
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVTPTNVAIPFKLLLFVVMDGWSTLIHGLVMTYR  216
            +QVTPTNVAIPFKLLLFV MDGWS LIHGLV++YR
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

33) sctR in NC_014718


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  242 bits (902),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 136/229 (60%), Positives = 186/229 (82%), Gaps = 3/229 (1%)

Query  2    IISASESSKWCKAMLQPSELTSLMLIVLAISVVPLVAVVITSYTKIVVVLSLLRNALGAQ  61
            ++  S + +  +A +Q +++ SL+L+V+ ++++P+ A+V+TSYTKIVVVL+LLRNA+G Q
Sbjct  1    MVCRSSACR--RARMQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQ  58

Query  62   QVPPNMVLNGIAILVSLYIMAPIGMAAAKQLENQPNAGTPSQSVVQAFSAAQEPFRAFLK  121
            QVPPNMVLNG+A+LVS ++MAP+GM A K  +N   AG+ +  +V  + A +EPFR FL 
Sbjct  59   QVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNY-GAGSDNSRIVVLLDACREPFRQFLL  117

Query  122  QHANKREKRFFMRTATVIWPKEVADGLREDDFIVLAPAFTLSELTDAFKIGFLLYITFVV  181
            +H+  REK FFMR+A  IWPK+ A  L+ DD+++LAPAFTLSELT+AF+IGFLLY+ F+V
Sbjct  118  KHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIV  177

Query  182  IDLIIANVLLAMGLNQVMPTNVAIPFKLLLFVVMDGWSTLIHGLILTYR  230
            IDL++AN L+AMGL+QV PTNVAIPFKLLLFV MDGWS LIHGL+L+YR
Sbjct  178  IDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

34) epaP in NC_021174


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  235 bits (876),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 130/214 (61%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPKAAAAQLRDDDLIVLAPAFTLAQMTDAFRIGFLLYIAFIIVDLVIANVLMSMGM  181
            A  IWPK  A+ L+ DDL++LAPAFTL+++T+AFRIGFLLY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

35) BTH_II0754 in NC_007650


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  235 bits (876),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 129/215 (60%), Positives = 180/215 (84%), Gaps = 1/215 (0%)

Query  2    VQFNDVTGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  DV +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRQFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFRQFL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVVWPKAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFVIVDLVIANVLMSMGM  181
            A  +WPK  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ F+++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTYS  216
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y 
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

36) sctR in NC_006349


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  233 bits (867),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 128/214 (60%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMGM  181
            A  IWP+  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

37) sctR in NC_008835


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  233 bits (867),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 128/214 (60%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMGM  181
            A  IWP+  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

38) sctR in NC_009079


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  233 bits (867),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 128/214 (60%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMGM  181
            A  IWP+  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

39) yscR in NC_009078


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  233 bits (867),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 128/214 (60%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMGM  181
            A  IWP+  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

40) yscR in NC_007435


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  233 bits (867),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 128/214 (60%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMGM  181
            A  IWP+  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

41) BPC006_II2174 in NC_018529


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  233 bits (867),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 128/214 (60%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMGM  181
            A  IWP+  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

42) BPSS1617 in NC_006351


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  233 bits (867),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 128/214 (60%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMGM  181
            A  IWP+  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

43) epaP in NC_021877


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  233 bits (867),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 128/214 (60%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMGM  181
            A  IWP+  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

44) Acav_0515 in NC_015138


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  228 bits (851),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 126/194 (65%), Positives = 164/194 (85%), Gaps = 3/194 (1%)

Query  27   MIVTSYTKVVVVLGLLRNALGVQQVPPNMVLNGIAIIISVYVMAPVAMEASDRMQMLPPS  86
            M+VTSYTK+VVVLGLLRNA+GVQQVPPNMVLNG+A+++S +VMAPV+MEA    Q   ++
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  87   AQSSNTQQMLAAASAAREPFRKFLDKHADAAEKAFFLKSAQALWPEDRARSLQADDLVVL  146
            +++S    +L    A REPFR+FL KH+   EKAFF++SAQ +WP D+A +L++DDL++L
Sbjct  96   SDNSRIVVLL---DACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLIL  152

Query  147  APAFLLTELTAAFRIGFLLYLAFIIVELVIANVLLAMGLSQVSPTNVAIPFKLLLFVVLD  206
            APAF L+ELT AFRIGFLLYL FI+++LV+AN L+AMGLSQV+PTNVAIPFKLLLFV +D
Sbjct  153  APAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMD  212

Query  207  GWSQVMHGLVMTYR  220
            GWS ++HGLV++YR
Sbjct  213  GWSMLIHGLVLSYR  226

45) Aave_0449 in NC_008752


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  228 bits (850),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 125/194 (65%), Positives = 164/194 (85%), Gaps = 3/194 (1%)

Query  27   MIVTSYTKVVVVLGLLRNALGVQQVPPNMVLNGIAIIISVYVMAPVAMEASDRMQMLPPS  86
            M+VTSYTK+VVVLGLLRNA+GVQQVPPNMVLNG+A+++S +VMAPV+MEA    Q   ++
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  87   AQSSNTQQMLAAASAAREPFRKFLDKHADAAEKAFFLKSAQALWPEERARSLQADDLVVL  146
            +++S    +L    A REPFR+FL KH+   EKAFF++SAQ +WP ++A +L++DDL++L
Sbjct  96   SDNSRIVVLL---DACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLIL  152

Query  147  APAFLLTELTAAFRIGFLLYLAFIIVELVIANVLLAMGLSQVSPTNVAIPFKLLLFVVLD  206
            APAF L+ELT AFRIGFLLYL FI+++LV+AN L+AMGLSQV+PTNVAIPFKLLLFV +D
Sbjct  153  APAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMD  212

Query  207  GWSQVMHGLVMTYR  220
            GWS ++HGLV++YR
Sbjct  213  GWSMLIHGLVLSYR  226

46) Bcenmc03_5928 in NC_010515


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  228 bits (850),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 126/196 (65%), Positives = 164/196 (84%), Gaps = 1/196 (0%)

Query  21   PFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAILVTLYVMAPIGMSAADTMRH  80
            PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+LV+ +VMAP+GM A  + ++
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91

Query  81   EQLANSPAEIMVQAFGASQAPFRTFLKAHSRERERLFFMRSAHVIWPESLANALHEDDLI  140
               ++  + I+V  ++A + PFR FL  H+ ERE+ FFMRSA+ IWP   A +L  DDL+
Sbjct  92   YGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150

Query  141  VLAPAFTLTELADAFKIGFLLYIAFIIVDFVIANVLLAMGLNQIQPTNVAIPFKLLLFVA  200
            +LAPAFTL+EL++AF+IGFLLY+ FI++D+V+AN L+AMGL+Q+ PTNVAIPFKLLLFVA
Sbjct  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210

Query  201  MDGWSALIHGLILTYK  216
            MDGWS LIHGL+L+Y+
Sbjct  211  MDGWSMLIHGLVLSYR  226

47) BP1026B_II1728 in NC_017832


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  228 bits (850),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 128/214 (60%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPqaaaaqLRDDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMGM  181
            A  IWP+  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

48) yscR in NC_009075


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  228 bits (850),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 128/214 (60%), Positives = 180/214 (85%), Gaps = 1/214 (0%)

Query  2    VQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAIL  61
            +Q  D+ +LL+ V++++++PF AMVVTSY+KIVVVLGLLRNA+GVQQVPPNMVLNG+A+L
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   VSLYIMAPIGFaaqqqlqgqalSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRS  121
            VS ++MAP+G  A +  Q  + +++ ++ ++  ++A +EPFR+FL  H+ EREK FF+RS
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  ASVIWPqaaaaqLRDDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMGM  181
            A  IWP+  A+ L+ DDL++LAPAFTL+++T+AFRIGF+LY+ FI++DLV+AN LM+MG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  NQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTY  215
            +QV PTNVAIPFKL+LFV MDGWS L+HGLVL+Y
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

49) VAPA_2c06210 in NC_022234


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  223 bits (830),  Expect = 7e-60, Method: Compositional matrix adjust.
 Identities = 115/215 (54%), Positives = 177/215 (83%), Gaps = 3/215 (1%)

Query  5    LPEPLTLVALIVAFGIAPFVALMVTSYTKLVIVFGLLRTALGLQQTPPNMVLNGIAIILS  64
            +P+  +L+ +++ +G+ PF A++VTSYTK+V+V+GLLR A+G+QQ PPNMVLNG+A+++S
Sbjct  15   MPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVS  74

Query  65   VYIMAPVGMDIGDALRGRSFGAKGEGLGDIMAVIDAAKAPVKEFLQKHTHERERQFFLKS  124
             ++MAPVGM+   A  ++++GA ++  + I+ ++DA + P ++FL KHT ERE+ FF++S
Sbjct  75   CFVMAPVGMEAFKA--AQNYGAGSDN-SRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  125  AANIWPKARAEQLKDDDFMVLVPSFTLSELTRAFQIGFIIYLVFVVVDLIVATVLLALGM  184
            A +IWPK +A  LK DD+++L P+FTLSELT AF+IGF++YLVF+V+DL+VA  L+A+G+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  185  SMISPTTISLPFKLLLFVMLDGWTRLVHGLVLSYR  219
            S ++PT +++PFKLLLFV +DGW+ L+HGLVLSYR
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

50) Varpa_4985 in NC_014931


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  215 bits (802),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 112/215 (53%), Positives = 176/215 (82%), Gaps = 3/215 (1%)

Query  5    IPEPITIVALILALGVTSFAALMVTSYTKLIIVFGLLRTALGLQQTPPNMVLNGIAIILS  64
            +P+  +++ +++ LG+ +FAA++VTSYTK+++V+GLLR A+G+QQ PPNMVLNG+A+++S
Sbjct  15   MPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVS  74

Query  65   VYIMAPVGMEVGDALRNRTLGQKGEGLNDIVAVIDAAKVPLKEFLQKHTRERERQFFLKS  124
             ++MAPVGME   A   +  G  ++  + IV ++DA + P+++FL KHT ERE+ FF++S
Sbjct  75   CFVMAPVGMEAFKA--AQNYGAGSDN-SRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  125  ASSMWPQARAAQLQPDDFMVLVPSFTLSELTRAFQIGFVIYLVFVVVDLIVATVLLALGM  184
            A  +WP+ +A+ L++DD+++L P+FTLSELT AF+IGF++YLVF+V+DL+VA  L+A+G+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  185  SMIAPTTISLPFKLLLFVMLDGWTRLVHGLVLSYR  219
            S ++PT +++PFKLLLFV +DGW+ L+HGLVLSYR
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

51) Rta_29680 in NC_015677


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  210 bits (781),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 129/212 (61%), Positives = 180/212 (85%), Gaps = 2/212 (0%)

Query  8    EVVPLLAIIFAIGFLPFVAMMVTSYTKIVVVLGLVRNALGVQQVPPNMMLNGIAIIISVY  67
            +V +LL +++ +G+LPF AM+VTSYTKIVVVLGL+RNA+GVQQVPPNM+LNG+A+++S +
Sbjct  17   DVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCF  76

Query  68   IVAPLFMDSFEALNKPAVAEGGGARQVASVVEAAREPVRRFLDKHAHAREKAFFLKSVSA  127
            ++AP+ M++F A      + G++  ++  +++A REP R+FL KH+  REKAFF++S   
Sbjct  77   VMAPVGMEAFKA--AQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQ  134

Query  128  IWTPERAKTVRPDDLIILAPAFTLSELTEAFKIGFLIYlafvvvdlvvanvllalglSQV  187
            IW  ++A T+++DDL+ILAPAFTLSELTEAF+IGFL+YL F+V+DLVVAN L+A+GLSQV
Sbjct  135  IWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQV  194

Query  188  TPTQIAIPFKLLLFVVMDGWSVLLHGLVMTYR  219
            TPT++AIPFKLLLFV MDGWS+L+HGLV++YR
Sbjct  195  TPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

52) HCH_03263 in NC_007645


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  196 bits (727),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 105/215 (49%), Positives = 160/215 (75%), Gaps = 1/215 (0%)

Query  1    MTLPDPFYLTLGLAGIALIPFFAVMATSFVKIAVVLGLLRNALGIQQIPPNMALYGLAII  60
            M +PD   L L +  ++L+PF A++ TS+ KI VVLGLLRNA+G+QQ+PPNM L G+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   LTAYIMAPVGISAYNELSTKPISLENTQELKALMDTASQPYKEFLQRHGSEDEQTFFHET  120
            ++ ++MAPVG+ A++       + +N++ +  L+D+  +P+++FL +H +E E++FF  +
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIV-VLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  121  AAEIWPEDVAKGLEKDSFFVLIPAFTASELTSAFEIGFLIYLPFLAIDLIISNILLAMGM  180
            A +IWP D A  L  D +++L PAFT SELT AF IGFL+YL F+ IDL+++N L+AMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  181  MMVSPMTISLPFKLLLFVLMDGWTRLIHGLVLAYQ  215
              V+P  +++PFKLLLFV MDGW+ LIHGLVL+Y+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

53) Bamb_4215 in NC_008391


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 117/199 (59%), Positives = 169/199 (85%), Gaps = 4/199 (2%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQS  80
            PFAA++VTSYTK+VVVLGLLR+A+G+QQVPPN+VLNG+AL++S F+MAPVGM    A  +
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA--A  89

Query  81   RHFDASGQLSTSDIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            ++++A+++   S I VL DA   P+++FL+ HT +R++ FF+R+A  +WPK++A  +K D
Sbjct  90   QNYGAGSD--NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+L P+FTL+ELT AF+IGF++Y+VFIV+DL+VAN L+A+G+  ++PT +++PFKLLL
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  201  FVALDGWSLLVHGLVLSYR  219
            FVA+DGWS+L+HGLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

54) BamMC406_4737 in NC_010552


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 117/199 (59%), Positives = 169/199 (85%), Gaps = 4/199 (2%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQS  80
            PFAA++VTSYTK+VVVLGLLR+A+G+QQVPPN+VLNG+AL++S F+MAPVGM    A  +
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA--A  89

Query  81   RHFDASGQLSTSDIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            ++++A+++   S I VL DA   P+++FL+ HT +R++ FF+R+A  +WPK++A  +K D
Sbjct  90   QNYGAGSD--NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+L P+FTL+ELT AF+IGF++Y+VFIV+DL+VAN L+A+G+  ++PT +++PFKLLL
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  201  FVALDGWSLLVHGLVLSYR  219
            FVA+DGWS+L+HGLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

55) MYA_4948 in NC_017921


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 117/199 (59%), Positives = 169/199 (85%), Gaps = 4/199 (2%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PFAA++VTSYTK+VVVLGLLR+A+G+QQVPPN+VLNG+AL++S F+MAPVGM    A  A
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA--A  89

Query  81   RHFDAAGQLSTADIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            ++++A+++   + I VL DA   P+++FL+ HT +R++ FF+R+A  +WPK++A  +K D
Sbjct  90   QNYGAGSD--NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+L P+FTL+ELT AF+IGF++Y+VFIV+DL+VAN L+A+G+  ++PT +++PFKLLL
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  201  FVALDGWSLLVHGLVLSYR  219
            FVA+DGWS+L+HGLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

56) Bcep1808_5328 in NC_009255


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 117/199 (59%), Positives = 169/199 (85%), Gaps = 4/199 (2%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PFAA++VTSYTK+VVVLGLLR+A+G+QQVPPN+VLNG+AL++S F+MAPVGM    A  A
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA--A  89

Query  81   RHFDAAGQLSTADIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            ++++A+++   + I VL DA   P+++FL+ HT +R++ FF+R+A  +WPK++A  +K D
Sbjct  90   QNYGAGSD--NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+L P+FTL+ELT AF+IGF++Y+VFIV+DL+VAN L+A+G+  ++PT +++PFKLLL
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  201  FVALDGWSLLVHGLVLSYR  219
            FVA+DGWS+L+HGLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

57) Bcen_3526 in NC_008061


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  192 bits (711),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 117/199 (59%), Positives = 168/199 (85%), Gaps = 4/199 (2%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PFAA++VTSYTK+VVVLGLLR+A+G+QQVPPN+VLNG+AL++S F+MAPVGM    A  A
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA--A  89

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            ++++A+++   S I  L DA   P+++FL+ HT +R++ FF+R+A  +WPK++A  +K D
Sbjct  90   QNYGAGSD--NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+L P+FTL+ELT AF+IGF++Y+VFIV+DL+VAN L+A+G+  ++PT +++PFKLLL
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  201  FVALDGWSLLVHGLVLSYR  219
            FVA+DGWS+L+HGLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

58) Bcen2424_4840 in NC_008543


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  192 bits (711),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 117/199 (59%), Positives = 168/199 (85%), Gaps = 4/199 (2%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PFAA++VTSYTK+VVVLGLLR+A+G+QQVPPN+VLNG+AL++S F+MAPVGM    A  A
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA--A  89

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            ++++A+++   S I  L DA   P+++FL+ HT +R++ FF+R+A  +WPK++A  +K D
Sbjct  90   QNYGAGSD--NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+L P+FTL+ELT AF+IGF++Y+VFIV+DL+VAN L+A+G+  ++PT +++PFKLLL
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  201  FVALDGWSLLVHGLVLSYR  219
            FVA+DGWS+L+HGLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

59) bcscR in NC_011001


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  192 bits (711),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 117/199 (59%), Positives = 168/199 (85%), Gaps = 4/199 (2%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PFAA++VTSYTK+VVVLGLLR+A+G+QQVPPN+VLNG+AL++S F+MAPVGM    A  A
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA--A  89

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            ++++A+++   S I  L DA   P+++FL+ HT +R++ FF+R+A  +WPK++A  +K D
Sbjct  90   QNYGAGSD--NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+L P+FTL+ELT AF+IGF++Y+VFIV+DL+VAN L+A+G+  ++PT +++PFKLLL
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  201  FVALDGWSLLVHGLVLSYR  219
            FVA+DGWS+L+HGLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

60) Bcenmc03_5444 in NC_010515


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  192 bits (711),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 117/199 (59%), Positives = 168/199 (85%), Gaps = 4/199 (2%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PFAA++VTSYTK+VVVLGLLR+A+G+QQVPPN+VLNG+AL++S F+MAPVGM    A  A
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA--A  89

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            ++++A+++   S I  L DA   P+++FL+ HT +R++ FF+R+A  +WPK++A  +K D
Sbjct  90   QNYGAGSD--NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+L P+FTL+ELT AF+IGF++Y+VFIV+DL+VAN L+A+G+  ++PT +++PFKLLL
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  201  FVALDGWSLLVHGLVLSYR  219
            FVA+DGWS+L+HGLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

61) Bmul_3754 in NC_010086


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  191 bits (709),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 116/199 (59%), Positives = 168/199 (85%), Gaps = 4/199 (2%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PFAA++VTSYTK+VVVLGLLR+A+GVQQVPPN+VLNG+AL++S F+MAPVGM    A  A
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA--A  89

Query  81   RHFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            ++++A+++   + +  L DA   P+++FL+ HT +R++ FF+R+A  +WPK++A  +K D
Sbjct  90   QNYGAGSD--NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+L P+FTL+ELT AF+IGF++Y+VFIV+DL+VAN L+A+G+  ++PT +++PFKLLL
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  201  FVALDGWSLLVHGLVLSYR  219
            FVA+DGWS+L+HGLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

62) yscR in NC_010805


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  191 bits (709),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 116/199 (59%), Positives = 168/199 (85%), Gaps = 4/199 (2%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PFAA++VTSYTK+VVVLGLLR+A+GVQQVPPN+VLNG+AL++S F+MAPVGM    A  A
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA--A  89

Query  81   RHFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            ++++A+++   + +  L DA   P+++FL+ HT +R++ FF+R+A  +WPK++A  +K D
Sbjct  90   QNYGAGSD--NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+L P+FTL+ELT AF+IGF++Y+VFIV+DL+VAN L+A+G+  ++PT +++PFKLLL
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  201  FVALDGWSLLVHGLVLSYR  219
            FVA+DGWS+L+HGLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

63) Dvul_2984 in NC_008741


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  190 bits (706),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 109/216 (51%), Positives = 163/216 (76%), Gaps = 4/216 (1%)

Query  1    MTGVAPLYFIAGMALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAII  60
            M +V++L ++  M  LGL PF  M+VTSY KIVVV +L+RNA+GVQQVPP MV+NG+A++
Sbjct  15   MPDVGSLLLVVIM--LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   LSIFIMAPVASGTLDLMQNMKIGPDPAPREIIALLDKASPPLRGFLERNADDKVVTVFMS  120
            +S F+MAPV+  ++   QN   G+++    I+ LLD    P+R FL +++ ++  + FM 
Sbjct  73   VSCFVMAPVGMEAFKAAQN--YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMR  130

Query  121  TAKRIWPADQHASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMG  180
            +A++IWP D+ +++  D+LLIL P+FT+SELT AF+IGFLLYL F+ IDLV++N L+AMG
Sbjct  131  SAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMG  190

Query  181  MMMVSPMTISLPFKLLLFVTLDGWLKVSQGLLLSYR  216
            +  V+P  +++PFKLLLFV++DGW  + +GL+LSYR
Sbjct  191  LSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

64) DVUA0122 in NC_005863


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  190 bits (706),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 109/216 (51%), Positives = 163/216 (76%), Gaps = 4/216 (1%)

Query  1    MTGVAPLYFIAGMALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAII  60
            M +V++L ++  M  LGL PF  M+VTSY KIVVV +L+RNA+GVQQVPP MV+NG+A++
Sbjct  15   MPDVGSLLLVVIM--LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   LSIFIMAPVASGTLDLMQNMKIGPDPAPREIIALLDKASPPLRGFLERNADDKVVTVFMS  120
            +S F+MAPV+  ++   QN   G+++    I+ LLD    P+R FL +++ ++  + FM 
Sbjct  73   VSCFVMAPVGMEAFKAAQN--YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMR  130

Query  121  TAKRIWPADQHASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMG  180
            +A++IWP D+ +++  D+LLIL P+FT+SELT AF+IGFLLYL F+ IDLV++N L+AMG
Sbjct  131  SAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMG  190

Query  181  MMMVSPMTISLPFKLLLFVTLDGWLKVSQGLLLSYR  216
            +  V+P  +++PFKLLLFV++DGW  + +GL+LSYR
Sbjct  191  LSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

65) Deval_3224 in NC_017311


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  190 bits (706),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 109/216 (51%), Positives = 163/216 (76%), Gaps = 4/216 (1%)

Query  1    MTGVAPLYFIAGMALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAII  60
            M +V++L ++  M  LGL PF  M+VTSY KIVVV +L+RNA+GVQQVPP MV+NG+A++
Sbjct  15   MPDVGSLLLVVIM--LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   LSIFIMAPVASGTLDLMQNMKIGPDPAPREIIALLDKASPPLRGFLERNADDKVVTVFMS  120
            +S F+MAPV+  ++   QN   G+++    I+ LLD    P+R FL +++ ++  + FM 
Sbjct  73   VSCFVMAPVGMEAFKAAQN--YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMR  130

Query  121  TAKRIWPADQHASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMG  180
            +A++IWP D+ +++  D+LLIL P+FT+SELT AF+IGFLLYL F+ IDLV++N L+AMG
Sbjct  131  SAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMG  190

Query  181  MMMVSPMTISLPFKLLLFVTLDGWLKVSQGLLLSYR  216
            +  V+P  +++PFKLLLFV++DGW  + +GL+LSYR
Sbjct  191  LSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

66) DvMF_2439 in NC_011769


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  189 bits (700),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 101/203 (50%), Positives = 157/203 (78%), Gaps = 4/203 (1%)

Query  15   LLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPAMVMNGLAIILSIFIMAPMVESTL  74
            +LGL PF  M+VTSY KIVVV +L+RNA+GVQQVPP MV+NG+A+++S F+MAP+    +
Sbjct  27   MLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV---GM  83

Query  75   DILKTVRV-SEQPEPREVVELLDRASPPLRDFLSRNADDKVITAFMGTAKRIWPKERHDT  133
            + +K+ +  +  ++   +V LLD    P+R+FL +++ ++  + FM +A++IWPK++  T
Sbjct  84   EAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATT  143

Query  134  IRRENLLILVPAFTISELTKAFQIGFLLYLPFVAIDLIISNILLAMGMMMVSPMTISLPF  193
            ++ ++LLIL PAFT+SELT AF+IGFLLYL F+ IDL+++N L+AMG+  V+P  +++PF
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  194  KLLLFVTLDGWLKISQGLLLSYK  216
            KLLLFV++DGW  + +GL+LSY+
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSYR  226

67) yscR in NC_015717


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  189 bits (701),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 104/216 (49%), Positives = 167/216 (78%), Gaps = 5/216 (2%)

Query  8    MGMPDPatlivlltavallPFIAIMATTYVKLVVVLGLVRNALGVQNVPPNMALNGIAII  67
            M MPD ++L++++  ++LLPF A++ T+Y K+VVVLGL+RNA+GVQ+VPPNM LNG+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  68   LTVYIMAPVAIASYQAVRD--RPVDTRNMESLADIARDGAKPFLHFLERNTTPADRAFFV  125
            ++ ++MAPV++ +++A ++     D   +  L D  R+   PF +FL ++T   ++AFF+
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACRE---PFRQFLLKHTPEREKAFFM  129

Query  126  DTTHRLWPKDQADSVTDHDILVLVPAFTTAELTKAFKAGFLLFLPFIVIDLIVSNILLAM  185
             +++++WPKD+A ++  +D+L+L PAFT +ELT AF+ GFLL+L FIVIDL+V+N L+AM
Sbjct  130  RSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAM  189

Query  186  GMMMVSPMTISLPFKLFLFVIVNGWQKLIQGLVLSY  221
            G+  V+P  +++PFKL+LFV ++GW  LI+GLVLSY
Sbjct  190  GLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

68) NH44784_014541 in NC_021285


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 99/197 (51%), Positives = 147/197 (75%), Gaps = 8/197 (4%)

Query  25   MTTSFLKIAVVLTLVRNALGVQQVPPNMALYGLALILSAYVMGPVVMQIGDELRAPPAVA  84
            + TS+ KI VVL L+RNA+GVQQVPPNM L G+AL++S +VM+PV M   + ++A+   +
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM---EAFKAAQNYG  93

Query  85   APGTPEPDRLEGILEAVARGAEPMRAFMLKNSRAEQRDFFLRTARGLWGEQQARNLKEDD  144
            A   ++  R+  +L+A     EP R F+LK++   ++ FF+R+A+ +W  ++A  LK DD
Sbjct  94   A--GSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDD  148

Query  145  LLVLIPSFLLSELTAAFQIGFLLYLPFVIIDLIVSNILLAMGMMMVSPVTISMPLKLFLF  204
            LL+L P+F LSELT AF+IGFLLYL F++IDL+V+N L+AMG+  V+P  +++P+KL+LF
Sbjct  149  LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLF  208

Query  205  VMVDGWTRLIQGLVLSY  221
            V +DGW+ LI+GLVLSY
Sbjct  209  VAMDGWSMLIHGLVLSY  225

69) sctR in NC_010530


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  176 bits (651),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 112/209 (54%), Positives = 174/209 (84%), Gaps = 3/209 (1%)

Query  11   ILTIILTFGIAPFVALMVTSYTKLVIVFGLLRAALGLQQVPPNMVLNGIAIILTAYIMAP  70
            +L +++ +G+ PF A++VTSYTK+V+V+GLLR A+G+QQVPPNMVLNG+A++++ ++MAP
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  71   IGSDAFDAIKRRadanaafnvndvvtvYDAVSGPLKEFLVKHTEERNRTFFVQSAKRIWP  130
            +G +AF A +      A+ + + +V + DA   P+++FL+KHT ER+++FF++SA++IWP
Sbjct  81   VGMEAFKAAQN---YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWP  137

Query  131  EGRADDLKSDDMMVLIPSFTLSELTRAFQIGfvvylvfvvvdlivaaillalGMSMVAPT  190
             ++A  LKSDD+++L P+FTLSELT AF+IGF++YLVF+V+DL+VA  L+A+G+S V+PT
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  191  TISVPFKLLLFVMLEGWTQLIQGLVLSYR  219
             +++PFKLLLFV ++GW+ LI+GLVLSYR
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

70) sctR in NC_020127


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  173 bits (640),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 97/197 (50%), Positives = 146/197 (75%), Gaps = 2/197 (1%)

Query  20   PFVIMMVTSYVKIVVVTSLIRNALGVQQVPPAIVMNGLAIILSIFIMAPVYMKMEDLYLK  79
            PF  M+VTSY KIVVV +L+RNA+GVQQVPP +V+NG+A+++S F+MAPV   ME +   
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAA  89

Query  80   TALPSSPAALEVIKALYDATPPLREFLIRNADESTIRGLMVTAKRIWPKDQHETISRNNL  139
                +++    ++  L     P+R+FL++++ E     +M +A++IWPKD+  T+  ++L
Sbjct  90   QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  LIIIPAFTITELTKSFQIGFLLYLPFVAIDLVVSNILLAMGMMMVSPMTISLPFKLLLFV  199
            LI+ PAFT++ELT +F+IGFLLYL F+ IDLVV+N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  TLDGWLKISQGLMLSYR  216
            ++DGW  + +GL+LSYR
Sbjct  210  AMDGWSMLIHGLVLSYR  226

71) SctR in NC_008011


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  173 bits (640),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 97/197 (50%), Positives = 146/197 (75%), Gaps = 2/197 (1%)

Query  20   PFVIMMVTSYVKIVVVTSLIRNALGVQQVPPAIVMNGLAIILSIFIMAPVYMKMEDLYLK  79
            PF  M+VTSY KIVVV +L+RNA+GVQQVPP +V+NG+A+++S F+MAPV   ME +   
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAA  89

Query  80   TALPSSPAALEVIKALYDATPPLREFLIRNADESTIRGLMVTAKRIWPKDQHETISRNNL  139
                +++    ++  L     P+R+FL++++ E     +M +A++IWPKD+  T+  ++L
Sbjct  90   QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  LIIIPAFTITELTKSFQIGFLLYLPFVAIDLVVSNILLAMGMMMVSPMTISLPFKLLLFV  199
            LI+ PAFT++ELT +F+IGFLLYL F+ IDLVV+N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  TLDGWLKISQGLMLSYR  216
            ++DGW  + +GL+LSYR
Sbjct  210  AMDGWSMLIHGLVLSYR  226

72) yscR in NC_007645


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 102/215 (48%), Positives = 165/215 (77%), Gaps = 3/215 (1%)

Query  1    MTDIQAIPLIGTLVLLSLIPFIAIMTTSFIKLAVVFSLLRNALGIQQIPPNMALYGLAIV  60
            M D+ ++ L+  +++L+L+PF A++ TS+ K+ VV++LLRNA+G+QQ+PPNM L G+A++
Sbjct  15   MPDVGSLLLV--VIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   LSIYIMAPVGYQIADTVKEKGFDLSQSESLKELANSAIDPMSEFLTKHSSEKERGFFLES  120
            +S ++MAPVG +   + ++ G + S++  +  L ++  +P  +FL KH++E+E++FF+ S
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  121  AETLWPKEYAARLDTNSMLVLVPSFTISELKSAFEIGFLLYLPFIAIDLIVSNILLAMGM  180
            A+ +WPK+ A+ L ++ +L+L P+FT+SEL  AF IGFLLYL FI IDL+V+N L+AMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  181  MMVSPMTISlpfklllfvllDGWTRLTHGLVLSYQ  215
              V+P  +++PFKLLLFV +DGW+ L HGLVLSY+
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

73) STAUR_6328 in NC_014623


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 85/204 (42%), Positives = 159/204 (78%), Gaps = 1/204 (0%)

Query  3    VLAVLSLLPFAVVMLTSFSKIAVVLSLARSAMGTQQAPPTVVLTGLAAVLSAHIMSPVMA  62
            V+ +L+LLPFA +++TS++KI VVL+L R+A+G QQ PP +VL G+A ++S  +M+PV  
Sbjct  24   VVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM  83

Query  63   RMYEVGREAARDAESGAQILAAVERTAEPLRAFLVKHGSAEERSRFVELARELRPPEEAT  122
              +  +++ + +++++ +I+  ++   EP+R FL+KH +  E++ F+  A++++P + AT
Sbjct  84   EAFKAAQNYGAGSDNS-RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKAT  142

Query  123  QVQEGDLFVVVPAFVITELKEAFQMGFLLFLPFLVLDMVIANILLALGMQSLSPSQVSLP  182
             ++ +DL+++ PAF ++EL EAF++GFLL+L F+V+D+V+AN L+A+G+  ++P++V++P
Sbjct  143  TLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIP  202

Query  183  FKILLFVTVDGWPLLAQGLIQGYR  206
            FK+LLFV++DGW++L +GL+ +YR
Sbjct  203  FKLLLFVAMDGWSMLIHGLVLSYR  226

74) bscR in NC_019382


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 92/199 (47%), Positives = 146/199 (74%), Gaps = 9/199 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + TS+ KI VVL+L+RNA+GVQQVPPNM L G+AL++S +VMAPV       ++A+ A  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV------GMEAFKAAQ  90

Query  85   GESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
              ++ +       ++ +++    P+R F+L+++   ++ FF+R+A+++W  + +  L  D
Sbjct  91   NYGAGSDN---SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+L+PAF +SELT AF++GFLLYL FI+IDL+V+N L+AMG+  V+P  +++P+KL+L
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  205  FVMVDGWTRLIQGLVLSYR  223
            FV +DGW+ LI+GLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

75) bscR in NC_018829


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 145/199 (73%), Gaps = 9/199 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + TS+ KI VVL+L+RNA+GVQQVPPNM L G+AL++S +VMAPV       ++A+ A  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV------GMEAFKAAQ  90

Query  85   GESGTAAPMALDAVLGVAERGVGPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
              ++ +    +  +L+       P+R F+L+++   ++ FF+R+A+++W  + +  L  D
Sbjct  91   NYGAGSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+L+PAF +SELT AF++GFLLYL FI+IDL+V+N L+AMG+  V+P  +++P+KL+L
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  205  FVMVDGWTRLIQGLVLSYR  223
            FV +DGW+ LI+GLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

76) bscR in NC_002927


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 92/199 (47%), Positives = 146/199 (74%), Gaps = 9/199 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + TS+ KI VVL+L+RNA+GVQQVPPNM L G+AL++S +VMAPV       ++A+ A  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV------GMEAFKAAQ  90

Query  85   GESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
              ++ +       ++ +++    P+R F+L+++   ++ FF+R+A+++W  + +  L  D
Sbjct  91   NYGAGSDN---SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+L+PAF +SELT AF++GFLLYL FI+IDL+V+N L+AMG+  V+P  +++P+KL+L
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  205  FVMVDGWTRLIQGLVLSYR  223
            FV +DGW+ LI+GLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

77) bscR in NC_002928


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 92/199 (47%), Positives = 146/199 (74%), Gaps = 9/199 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + TS+ KI VVL+L+RNA+GVQQVPPNM L G+AL++S +VMAPV       ++A+ A  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV------GMEAFKAAQ  90

Query  85   GESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
              ++ +       ++ +++    P+R F+L+++   ++ FF+R+A+++W  + +  L  D
Sbjct  91   NYGAGSDN---SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+L+PAF +SELT AF++GFLLYL FI+IDL+V+N L+AMG+  V+P  +++P+KL+L
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  205  FVMVDGWTRLIQGLVLSYR  223
            FV +DGW+ LI+GLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

78) bscR in NC_018518


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 145/199 (73%), Gaps = 9/199 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + TS+ KI VVL+L+RNA+GVQQVPPNM L G+AL++S +VMAPV       ++A+ A  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV------GMEAFKAAQ  90

Query  85   GESGTAAPMALDAVLGVAERGVGPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
              ++ +    +  +L+       P+R F+L+++   ++ FF+R+A+++W  + +  L  D
Sbjct  91   NYGAGSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+L+PAF +SELT AF++GFLLYL FI+IDL+V+N L+AMG+  V+P  +++P+KL+L
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  205  FVMVDGWTRLIQGLVLSYR  223
            FV +DGW+ LI+GLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

79) bscR in NC_018828


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 92/199 (47%), Positives = 146/199 (74%), Gaps = 9/199 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + TS+ KI VVL+L+RNA+GVQQVPPNM L G+AL++S +VMAPV       ++A+ A  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV------GMEAFKAAQ  90

Query  85   GESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
              ++ +       ++ +++    P+R F+L+++   ++ FF+R+A+++W  + +  L  D
Sbjct  91   NYGAGSDN---SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+L+PAF +SELT AF++GFLLYL FI+IDL+V+N L+AMG+  V+P  +++P+KL+L
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  205  FVMVDGWTRLIQGLVLSYR  223
            FV +DGW+ LI+GLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

80) bscR in NC_017223


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 145/199 (73%), Gaps = 9/199 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + TS+ KI VVL+L+RNA+GVQQVPPNM L G+AL++S +VMAPV       ++A+ A  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV------GMEAFKAAQ  90

Query  85   GESGTAAPMALDAVLGVAERGVGPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
              ++ +    +  +L+       P+R F+L+++   ++ FF+R+A+++W  + +  L  D
Sbjct  91   NYGAGSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+L+PAF +SELT AF++GFLLYL FI+IDL+V+N L+AMG+  V+P  +++P+KL+L
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  205  FVMVDGWTRLIQGLVLSYR  223
            FV +DGW+ LI+GLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

81) bscR in NC_002929


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 145/199 (73%), Gaps = 9/199 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + TS+ KI VVL+L+RNA+GVQQVPPNM L G+AL++S +VMAPV       ++A+ A  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV------GMEAFKAAQ  90

Query  85   GESGTAAPMALDAVLGVAERGVGPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
              ++ +    +  +L+       P+R F+L+++   ++ FF+R+A+++W  + +  L  D
Sbjct  91   NYGAGSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+L+PAF +SELT AF++GFLLYL FI+IDL+V+N L+AMG+  V+P  +++P+KL+L
Sbjct  148  DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLL  207

Query  205  FVMVDGWTRLIQGLVLSYR  223
            FV +DGW+ LI+GLVLSYR
Sbjct  208  FVAMDGWSMLIHGLVLSYR  226

82) MXAN_5647 in NC_008095


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  171 bits (633),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 92/203 (46%), Positives = 153/203 (76%), Gaps = 3/203 (1%)

Query  16   VMSLLPFAVLMLTSFSKIAVVLSLARSAMGTQQAPPTIVLTGLAAVLTGHIMAPVMERMY  75
            +++LLPFA +++TS++KI VVL+L R+A+G QQ PP +VL G+A +++  +MAPV    +
Sbjct  27   MLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAF  86

Query  76   DAGQVAYAEVASGSGAEMLSAASRVSEPLRAFLIKHGSAEERARFVDLARELRPVEEMDA  135
             A+Q  Y+  +  S   +L  A R  EP+R FL+KH +  E+A F+  A++++P +   +
Sbjct  87   KAAQ-NYGAGSDNSRIVVLLDACR--EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATT  143

Query  136  VRETDLFIVIPAFVITELKEAFQIGFLVFLPFLVLDMVIANVLLALGMQTLSPSQVSLPF  195
            ++  DL+I+ PAF ++EL EAF+IGFL++L F+V+D+V+AN L+A+G+  ++P++V++PF
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  196  KILLFVAVDGWSLLARGLILGYR  218
            K+LLFVA+DGWS+L +GL+L+YR
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSYR  226

83) epaP in NC_021174


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  169 bits (626),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 103/207 (50%), Positives = 155/207 (75%), Gaps = 1/207 (0%)

Query  8    DLLALAVAMSMLPAACVLVTSFTKIAVVFALVKNAIGIQQVPSTLVTNALALIVTLYVMA  67
             LL + + +++LP A ++VTS+TKI VV++L++NAIG+QQVP+ +V N++AL+V+ +VMA
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  68   PV-LSDVAANASNGPARGQSRIEWLSGAVSGPVGGFMKKHVDPREQERLIASAAQIWPDT  126
            PV +    A  + G++ ++SRI  L +A   P   F+ KH   RE+  ++ SA QIWP  
Sbjct  80   PVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  127  MAKSVKPDDFFILAPAFAISELTAAFKIGFVLYLAFVAIDLIVANILMAMGMIMFSPTIV  186
             A ++K+DD++ILAPAF++SELT AF+IGF+LYL F+ IDL+VAN LMAMG+   +PT V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  187  SIPLKIVLFALADGWSRLIQSLILTYR  213
            +IP+K++LF   DGWS LI++L+L+YR
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSYR  226

84) USDA257_c21640 in NC_018000


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  169 bits (626),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 94/211 (45%), Positives = 157/211 (75%), Gaps = 1/211 (0%)

Query  6    TNLIPIIIIVSTIGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALILTV  65
             ++ +++++V  +GL+P+A + +T++ KI +VL L+RNA+G+QQ PPN+VL GVAL+++ 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  66   YVTTPLVGEMYRTLSSEQVDVQSMDSMVRAADQLRAPLQAHLTRYTDENERQFFLQATER  125
            +V +P+  E +++  +   + ++   +V   D  R P++  L + T E E+ FF++++++
Sbjct  76   FVMAPVGMEAFKAAQNYGAGSDN-SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQ  134

Query  126  IWSEEARASVKTDSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMMMV  185
            IW+ +  +++K+D LLIL PAF  SELT AF IGFLLYL F+VIDL+V+  LMAMG+  V
Sbjct  135  IWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQV  194

Query  186  SPTLISIPLKIFLFVAVNGWSRLMHGLILSY  216
            +PT ++IP+K++LFVA++GWS L+HGL+LSY
Sbjct  195  TPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

85) LILAB_35715 in NC_015711


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  169 bits (625),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 92/210 (44%), Positives = 157/210 (75%), Gaps = 3/210 (1%)

Query  34   SMMGMLAVMSLLPFAVLMLTSFSKIAVVLSLARSAMGTQQAPPTIVLTGLAAVLTGHIMA  93
            S++ ++ +++LLPFA +++TS++KI VVL+L R+A+G QQ PP +VL G+A +++  +MA
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  94   PVMERMYEAGQVAYTQVASGSGAEMLSAASRVSEPLRAFLVKHGSPEERARFVDLARELR  153
            PV    + A+Q  Y   +  S   +L  A R  EP+R FL+KH +  E+A F+  A++++
Sbjct  80   PVGMEAFKAAQ-NYGAGSDNSRIVVLLDACR--EPFRQFLLKHTPEREKAFFMRSAQQIW  136

Query  154  PVEELESVRETDLFVVIPAFVITELKEAFQIGFLVFLPFLVLDMVIANVLLALGMQTLSP  213
            P +   +++  DL+++ PAF ++EL EAF+IGFL++L F+V+D+V+AN L+A+G+  ++P
Sbjct  137  PKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTP  196

Query  214  SQVSLPFKILLFVAVDGWSLLARGLILGYR  243
            ++V++PFK+LLFVA+DGWS+L +GL+L+YR
Sbjct  197  TNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

86) rhcR in NC_012586


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  168 bits (623),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 1/211 (0%)

Query  6    TNLIPIIIIVSTIGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALILTV  65
             ++ +++++V  +GL+P+A + +T++ KI +VL L+RNA+G+QQ PPN+VL GVAL+++ 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  66   YVTTPLVGEMYRTLSSEQVDMQSMDSMVRAANQLRAPLQAHLTRYTDENERQFFLQATER  125
            +V +P+  E +++  +   + ++   +V   +  R P++  L + T E E+ FF++++++
Sbjct  76   FVMAPVGMEAFKAAQNYGAGSDN-SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQ  134

Query  126  IWSEEARASVKTDSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMMMV  185
            IW+ +  +++K+D LLIL PAF  SELT AF IGFLLYL F+VIDL+V+  LMAMG+  V
Sbjct  135  IWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQV  194

Query  186  SPTLISIPLKIFLFVAVNGWSRLMHGLILSY  216
            +PT ++IP+K++LFVA++GWS L+HGL+LSY
Sbjct  195  TPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

87) C770_GR4pC1264 in NC_019848


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  168 bits (621),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 94/213 (45%), Positives = 158/213 (75%), Gaps = 1/213 (0%)

Query  3    ETTNLIPIIIIVSTIGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALIL  62
            +  ++ +++++V  +GL+P+A + +T++ KI +VL L+RNA+G+QQ PPN+VL GVAL++
Sbjct  14   QMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLV  73

Query  63   TVYVTTPLVGEMYRTLSSEPVDVQSIDSMMRAADSLRVPLQTHLKRYTDENERQFFMQAT  122
            + +V +P+  E +++  +   + ++   ++   D+ R P++  L + T E E+ FFM+++
Sbjct  74   SCFVMAPVGMEAFKAAQNYGAGSDN-SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSA  132

Query  123  ERIWSEEARAEVKTDSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMM  182
            ++IW+ +  + +K+D LLIL PAF  SELT AF IGFLLYL F+VIDL+V+  LMAMG+ 
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  183  MVSPTLISIPLKIFLFVAVNGWSRLMHGLILSY  215
             V+PT ++IP+K++LFVA++GWS L+HGL+LSY
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

88) rhcR in NC_004463


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  168 bits (620),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 97/214 (46%), Positives = 150/214 (71%), Gaps = 7/214 (3%)

Query  6    PSILALLAITVGLGLLAFAVVTTTAFIKVSVVLFLVRNALGTQSIPPNIVLYGAALILTV  65
            P + +LL + + LGLL+FA +  T++ K+ VVL L+RNA+G Q +PPN+VL G AL+++ 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  66   FISAPVFEQTYNRLTDPQLRYQSFDDW---VMAAKEGQEPLRVHLKKFTNEEQRRFFLSS  122
            F+ APV  ++++    +   Y +  D    V+     +EP+R  L K T E ++ FF+ S
Sbjct  76   FVMAPVGMEAFK----AAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  123  TEHVWSEEMRGSVTADDFSILVPSFLISELKRGFEIGFLLYLPFITIDLIVTTILMAMGM  182
            ++++W+ +   ++ +DD+ IL P+F +SEL  +F IGFLLYL FI IDL+V+  LMAMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  183  SMVSPTVISVPFKLFLFVTIDGWSRLMHGLVLSY  216
            S V+PT +++PFKL+LFV++DGWS L+HGLVLSY
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

89) rhcR in NC_017249


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  168 bits (620),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 97/214 (46%), Positives = 150/214 (71%), Gaps = 7/214 (3%)

Query  6    PSILALLAITVGLGLLAFAVVTTTAFIKVSVVLFLVRNALGTQSIPPNIVLYGAALILTV  65
            P + +LL + + LGLL+FA +  T++ K+ VVL L+RNA+G Q +PPN+VL G AL+++ 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  66   FISAPVFEQTYNRLTDPQLRYQSFDDW---VMAAKEGQEPLRVHLKKFTNEEQRRFFLSS  122
            F+ APV  ++++    +   Y +  D    V+     +EP+R  L K T E ++ FF+ S
Sbjct  76   FVMAPVGMEAFK----AAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  123  TEHVWSEEMRGSVTADDFSILVPSFLISELKRGFEIGFLLYLPFITIDLIVTTILMAMGM  182
            ++++W+ +   ++ +DD+ IL P+F +SEL  +F IGFLLYL FI IDL+V+  LMAMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  183  SMVSPTVISVPFKLFLFVTIDGWSRLMHGLVLSY  216
            S V+PT +++PFKL+LFV++DGWS L+HGLVLSY
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

90) SFHH103_04957 in NC_016815


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  167 bits (619),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 94/213 (45%), Positives = 156/213 (74%), Gaps = 5/213 (2%)

Query  6    TNLIPIIIIVSTIGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALILTV  65
             ++ +++++V  +GL+P+A + +T++ KI +VL L+RNA+G+QQ PPN+VL GVAL+++ 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  66   YVTTPLVGEMYRTLS--SEQVDMQSMDSMMRAANQLRAPLQAHLTRYTDENERQFFLQAT  123
            +V +P+  E +++    +   D   +  ++ A    R P++  L + T E E+ FF++++
Sbjct  76   FVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDAC---REPFRQFLLKHTPEREKAFFMRSA  132

Query  124  ERIWSEEARASVKTDSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMM  183
            ++IW+ +  +++K+D LLIL PAF  SELT AF IGFLLYL F+VIDL+V+  LMAMG+ 
Sbjct  133  QQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLS  192

Query  184  MVSPTLISIPLKIFLFVAVNGWSRLMHGLILSY  216
             V+PT ++IP+K++LFVA++GWS L+HGL+LSY
Sbjct  193  QVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

91) yscR in NC_016642


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 143/189 (76%), Gaps = 3/189 (1%)

Query  28   TSFIKLSVVLLLVRNALGVQQIPPNMALNALAIILSGYIMLPVFLQTFEILEKGNYSIAT  87
            TS+ K+ VVL L+RNA+GVQQ+PPNM LN++A+++S ++M PV +++F   +  NY+ ++
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQ--NYGAGS  96

Query  88   VEDMKTTFV-AAKGPLEEFLAKHADSKEKAFFLEASRQLWPAEVADSMSADSIAILLPAY  146
             +     ++ A + P+ +FL KH+  +EKAFF+ +++Q+WP + A ++ +D + IL PA+
Sbjct  97   DNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAF  156

Query  147  TVSQLREAFEIGFLLYLPFLAIDLVVSNILLAMGMMMVSPLTISLPFKLFLFVAVDGWSR  206
            T+S+L EAF IGFLLYL F+ IDLVV+N L+AMG+  V+P  +++PFKL+LFVA+DGWS 
Sbjct  157  TLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSM  216

Query  207  LILGLIKTY  215
            LI GL+ +Y
Sbjct  217  LIHGLVLSY  225

92) PADK2_17235 in NC_018080


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  162 bits (599),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 108/214 (51%), Positives = 163/214 (77%), Gaps = 1/214 (0%)

Query  2    IQLPDElglilglallalVPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAII  61
            +Q+PD  +L+L + +L+L+PF A++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   LSLYVMAPVGFATRDYLRNHDVSLNDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMES  121
            +S +VMAPVG  +    +N + + +D++ +  +LD    P+R+FL ++  ERE +FFM S
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  TRQVWPSEYAERLDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGM  181
            ++Q+WP + A  L +D LLIL PAFT+SELT AF IGFL+YL FI IDL+++N L+AMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  MMVSPMTISlpfklllfvllDGWARLTHGLVISY  215
              V+P  +++PFKLLLFV +DGW+ L HGLV+SY
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

93) pscR in NC_017548


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  162 bits (600),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 109/214 (51%), Positives = 163/214 (77%), Gaps = 1/214 (0%)

Query  2    IQLPDElglilglallalVPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAII  61
            +Q+PD  +L+L + +L+L+PF A++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   LSLYVMAPVGFATRDYLRNHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMES  121
            +S +VMAPVG  +    +N + + SD++ +  +LD    P+R+FL ++  ERE +FFM S
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  TRQVWPSEYAERLDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGM  181
            ++Q+WP + A  L +D LLIL PAFT+SELT AF IGFL+YL FI IDL+++N L+AMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  MMVSPMTISlpfklllfvllDGWARLTHGLVISY  215
              V+P  +++PFKLLLFV +DGW+ L HGLV+SY
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

94) pscR in NC_017549


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  162 bits (600),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 109/214 (51%), Positives = 163/214 (77%), Gaps = 1/214 (0%)

Query  2    IQLPDElglilglallalVPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAII  61
            +Q+PD  +L+L + +L+L+PF A++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   LSLYVMAPVGFATRDYLRNHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMES  121
            +S +VMAPVG  +    +N + + SD++ +  +LD    P+R+FL ++  ERE +FFM S
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  TRQVWPSEYAERLDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGM  181
            ++Q+WP + A  L +D LLIL PAFT+SELT AF IGFL+YL FI IDL+++N L+AMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  MMVSPMTISlpfklllfvllDGWARLTHGLVISY  215
              V+P  +++PFKLLLFV +DGW+ L HGLV+SY
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

95) pscR in NC_002516


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  162 bits (600),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 109/214 (51%), Positives = 163/214 (77%), Gaps = 1/214 (0%)

Query  2    IQLPDElglilglallalVPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAII  61
            +Q+PD  +L+L + +L+L+PF A++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   LSLYVMAPVGFATRDYLRNHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMES  121
            +S +VMAPVG  +    +N + + SD++ +  +LD    P+R+FL ++  ERE +FFM S
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  TRQVWPSEYAERLDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGM  181
            ++Q+WP + A  L +D LLIL PAFT+SELT AF IGFL+YL FI IDL+++N L+AMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  MMVSPMTISlpfklllfvllDGWARLTHGLVISY  215
              V+P  +++PFKLLLFV +DGW+ L HGLV+SY
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

96) ssaR in NC_021577


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  162 bits (600),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 109/214 (51%), Positives = 163/214 (77%), Gaps = 1/214 (0%)

Query  2    IQLPDElglilglallalVPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAII  61
            +Q+PD  +L+L + +L+L+PF A++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   LSLYVMAPVGFATRDYLRNHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMES  121
            +S +VMAPVG  +    +N + + SD++ +  +LD    P+R+FL ++  ERE +FFM S
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  TRQVWPSEYAERLDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGM  181
            ++Q+WP + A  L +D LLIL PAFT+SELT AF IGFL+YL FI IDL+++N L+AMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  MMVSPMTISlpfklllfvllDGWARLTHGLVISY  215
              V+P  +++PFKLLLFV +DGW+ L HGLV+SY
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

97) pscR in NC_008463


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  162 bits (600),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 109/214 (51%), Positives = 163/214 (77%), Gaps = 1/214 (0%)

Query  2    IQLPDElglilglallalVPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAII  61
            +Q+PD  +L+L + +L+L+PF A++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   LSLYVMAPVGFATRDYLRNHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMES  121
            +S +VMAPVG  +    +N + + SD++ +  +LD    P+R+FL ++  ERE +FFM S
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  TRQVWPSEYAERLDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGM  181
            ++Q+WP + A  L +D LLIL PAFT+SELT AF IGFL+YL FI IDL+++N L+AMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  MMVSPMTISlpfklllfvllDGWARLTHGLVISY  215
              V+P  +++PFKLLLFV +DGW+ L HGLV+SY
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

98) G655_16715 in NC_020912


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  162 bits (598),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 109/214 (51%), Positives = 163/214 (77%), Gaps = 1/214 (0%)

Query  2    IQLPDElglilglallalVPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAII  61
            +Q+PD  +L+L + +L+L+PF A++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   LSLYVMAPVGFATRDYLRNHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMES  121
            +S +VMAPVG  +    +N + + SD++ +  +LD    P+R+FL ++  ERE +FFM S
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  122  TRQVWPSEYAERLDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGM  181
            ++Q+WP + A  L +D LLIL PAFT+SELT AF IGFL+YL FI IDL+++N L+AMG+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  182  MMVSPMTISlpfklllfvllDGWARLTHGLVISY  215
              V+P  +++PFKLLLFV +DGW+ L HGLV+SY
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

99) S58_72190 in NC_020453


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  162 bits (598),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 94/210 (45%), Positives = 141/210 (68%), Gaps = 7/210 (3%)

Query  8    AVLAVIAGLGLVTFAVVTMTSFVKIAVVLFLIRNALGVQQTPPNLVLYAIALVLTAYVSA  67
            ++L V+  LGL+ FA + +TS+ KI VVL L+RNA+GVQQ PPN+VL ++AL+++ +V A
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  68   PLVQAVYERVNDRATEFQTFADWKDAA---ERATQPVREHLSRFTTVAERDFFVTATGSL  124
            P+    +      A ++ + +D        +   +P R+ L + T   E+ FF+ ++  +
Sbjct  80   PVGMEAF----KAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQI  135

Query  125  WPDSSRAKLSSEDLVILVPSFMSSELKRAFEIGFLLYLPFIAIDLVVSAVLMSLGMSMVP  184
            WP    + L S+DL+IL P+F  SEL  AF IGFLLYL FI IDLVV+  LM++G+S V 
Sbjct  136  WPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVT  195

Query  185  PSTISVPFKLFLFVMVEGWSKLMHGLVLSY  214
            P+ +++PFKL+LFV ++GWS L+HGLVLSY
Sbjct  196  PTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

100) fliP in NC_017030


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  162 bits (598),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 153/206 (75%), Gaps = 8/206 (3%)

Query  68   MSLVPFALMMVTSFVKISVVLSIVRSALGTQQIPPTQVITGLAIILTVYIMAPVGQEMYR  127
            ++L+PFA M+VTS+ KI VVL+++R+A+G QQ+PP  V+ G+A++++ ++MAPVG E ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  128  AGGIDIWSRGTSVFSSETVGTMLGAADKSKEPLREFLMKKVTNKDRTLFYSLAKKMRKEE  187
            A+  +  + G+    +  +  +L   D  +EP+R+FL+K   ++++++F   A++++  +
Sbjct  88   AA--QNYGAGSD---NSRIVVLL---DACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  188  DRKDIGPNDFMVIVPAFVVSELKEAFQIGFLLFVPFIVIDMVVANILLALGMHMLSPTTI  247
                + ++D++++ PAF +SEL EAF+IGFLL++ FIVID+VVAN L+A+G+  ++PT +
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  248  SMPFKLLLFVLVDGWYLIAKGLVIGY  273
            ++PFKLLLFV +DGW ++  GLV++Y
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

101) LILAB_19925 in NC_015711


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  161 bits (596),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 88/206 (43%), Positives = 154/206 (75%), Gaps = 8/206 (3%)

Query  68   MGLVPFALMMVTSFVKISVVLSIVRSALGTQQIPPTQVITGLAVILTVYIMAPVGTQMYR  127
            +GL+PFA M+VTS+ KI VVL+++R+A+G QQ+PP  V+ G+A++++ ++MAPVG + ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  128  AAGLDIWAKGPGVFSSETVGSMLGAANKSKEPLREWLMKKVTTKDRALFFNLAKKLRQGE  187
            AA  +  + G++   +  +  +L+A    +EP+R+ L+K    +++A+F   A++++  +
Sbjct  88   AA--QNYGAGSD---NSRIVVLLDA---CREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  188  DRDAVESDDFMVIIPAFVVSELKEAFQIGFLLFVPFIVIDMVVANILLALGMHMLSPTTI  247
               ++ SDD++++ PAF +SEL EAF+IGFLL++ FIVID+VVAN L+A+G+  ++PT +
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  248  SMPFKLLLFVLVDGWYLIAKGLVVGY  273
            ++PFKLLLFV +DGW ++  GLV++Y
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

102) M892_04535 in NC_022269


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  161 bits (593),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 104/195 (54%), Positives = 143/195 (74%), Gaps = 1/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVTQ  80
            PF AM+ TS+ K+ VV++LLRNA+GVQQ+PPNM L G+A+++S F+MAPVG E++    +
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91

Query  81   HEISLEDSESIEGLIESGLQPYREFLKKHIRETESVFFTDAARTLWPQKYVDRLESDSll  140
               +  D+  I  L+++  +P+R+FL KH  E E  FF  +A+ +WP+     L SD LL
Sbjct  92   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            +L PAFT+SELT AF IGFLLYL FI IDL+V+N L+AMG+  V+P  +++PFKLLLFV 
Sbjct  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210

Query  201  lDGWTKLTHGLVLSY  215
            +DGW+ L HGLVLSY
Sbjct  211  MDGWSMLIHGLVLSY  225

103) VIBHAR_01726 in NC_009783


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  161 bits (593),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 104/195 (54%), Positives = 143/195 (74%), Gaps = 1/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVTQ  80
            PF AM+ TS+ K+ VV++LLRNA+GVQQ+PPNM L G+A+++S F+MAPVG E++    +
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91

Query  81   HEISLEDSESIEGLIESGLQPYREFLKKHIRETESVFFTDAARTLWPQKYVDRLESDSll  140
               +  D+  I  L+++  +P+R+FL KH  E E  FF  +A+ +WP+     L SD LL
Sbjct  92   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            +L PAFT+SELT AF IGFLLYL FI IDL+V+N L+AMG+  V+P  +++PFKLLLFV 
Sbjct  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210

Query  201  lDGWTKLTHGLVLSY  215
            +DGW+ L HGLVLSY
Sbjct  211  MDGWSMLIHGLVLSY  225

104) N646_0740 in NC_022349


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  161 bits (593),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 103/195 (53%), Positives = 146/195 (75%), Gaps = 1/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF AM+ TS+ K+ VV++LLRNA+GVQQ+PPNM L G+A+++S F+MAPVG E++   ++
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
             + +  D++ +  L+++  +P+R+FL KH  E E  FF  +A+ +WP+     L SD LL
Sbjct  92   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            +L PAFT+SELT AF IGFLLYL FI IDL+V+N L+AMG+  V+P  +++PFKLLLFV 
Sbjct  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210

Query  201  lDGWTKLTHGLVLSY  215
            +DGW+ L HGLVLSY
Sbjct  211  MDGWSMLIHGLVLSY  225

105) VEA_003362 in NC_013456


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  161 bits (593),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 103/195 (53%), Positives = 146/195 (75%), Gaps = 1/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF AM+ TS+ K+ VV++LLRNA+GVQQ+PPNM L G+A+++S F+MAPVG E++   ++
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
             + +  D++ +  L+++  +P+R+FL KH  E E  FF  +A+ +WP+     L SD LL
Sbjct  92   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            +L PAFT+SELT AF IGFLLYL FI IDL+V+N L+AMG+  V+P  +++PFKLLLFV 
Sbjct  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210

Query  201  lDGWTKLTHGLVLSY  215
            +DGW+ L HGLVLSY
Sbjct  211  MDGWSMLIHGLVLSY  225

106) VPBB_1532 in NC_019955


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  161 bits (593),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 103/195 (53%), Positives = 146/195 (75%), Gaps = 1/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF AM+ TS+ K+ VV++LLRNA+GVQQ+PPNM L G+A+++S F+MAPVG E++   ++
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
             + +  D++ +  L+++  +P+R+FL KH  E E  FF  +A+ +WP+     L SD LL
Sbjct  92   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            +L PAFT+SELT AF IGFLLYL FI IDL+V+N L+AMG+  V+P  +++PFKLLLFV 
Sbjct  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210

Query  201  lDGWTKLTHGLVLSY  215
            +DGW+ L HGLVLSY
Sbjct  211  MDGWSMLIHGLVLSY  225

107) ssaR in NC_021848


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  161 bits (593),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 103/195 (53%), Positives = 146/195 (75%), Gaps = 1/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF AM+ TS+ K+ VV++LLRNA+GVQQ+PPNM L G+A+++S F+MAPVG E++   ++
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
             + +  D++ +  L+++  +P+R+FL KH  E E  FF  +A+ +WP+     L SD LL
Sbjct  92   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            +L PAFT+SELT AF IGFLLYL FI IDL+V+N L+AMG+  V+P  +++PFKLLLFV 
Sbjct  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210

Query  201  lDGWTKLTHGLVLSY  215
            +DGW+ L HGLVLSY
Sbjct  211  MDGWSMLIHGLVLSY  225

108) ssaR in NC_021847


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  161 bits (593),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 103/195 (53%), Positives = 146/195 (75%), Gaps = 1/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF AM+ TS+ K+ VV++LLRNA+GVQQ+PPNM L G+A+++S F+MAPVG E++   ++
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
             + +  D++ +  L+++  +P+R+FL KH  E E  FF  +A+ +WP+     L SD LL
Sbjct  92   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            +L PAFT+SELT AF IGFLLYL FI IDL+V+N L+AMG+  V+P  +++PFKLLLFV 
Sbjct  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210

Query  201  lDGWTKLTHGLVLSY  215
            +DGW+ L HGLVLSY
Sbjct  211  MDGWSMLIHGLVLSY  225

109) VP1672 in NC_004603


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  161 bits (593),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 103/195 (53%), Positives = 146/195 (75%), Gaps = 1/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF AM+ TS+ K+ VV++LLRNA+GVQQ+PPNM L G+A+++S F+MAPVG E++   ++
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
             + +  D++ +  L+++  +P+R+FL KH  E E  FF  +A+ +WP+     L SD LL
Sbjct  92   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            +L PAFT+SELT AF IGFLLYL FI IDL+V+N L+AMG+  V+P  +++PFKLLLFV 
Sbjct  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210

Query  201  lDGWTKLTHGLVLSY  215
            +DGW+ L HGLVLSY
Sbjct  211  MDGWSMLIHGLVLSY  225

110) MYSTI_02838 in NC_020126


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  161 bits (594),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 88/206 (43%), Positives = 153/206 (75%), Gaps = 8/206 (3%)

Query  68   MGLVPFALMMVTSFVKISVVLSIVRSALGTQQIPPTQVITGLAVILTVYIMAPVGTAMYR  127
            +GL+PFA M+VTS+ KI VVL+++R+A+G QQ+PP  V+ G+A++++ ++MAPVG   ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  128  AAEIDVWAKGPGVFSSSTVGSLLEGASKSKEPLRAWLMKKVTVKDRSLFYNLAKKMRTGE  187
            AA+      G+G   +S +  LL++    +EP+R  L+K    +++++F   A++++  +
Sbjct  88   AAQ----NYGAGS-DNSRIVVLLDA---CREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  188  DRDSVQSQDFMVIVPAFVVSELKEAFQIGFLLFVPFIVIDMVVANILLALGMHMLSPTTI  247
               +++S+D++++ PAF +SEL EAF+IGFLL++ FIVID+VVAN L+A+G+  ++PT +
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  248  SMPFKLLLFVLVDGWYLIAKGLVVGY  273
            ++PFKLLLFV +DGW ++  GLV++Y
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

111) sctR in NC_014225


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  159 bits (586),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 88/213 (42%), Positives = 155/213 (73%), Gaps = 10/213 (4%)

Query  84   VLTILSMLPFIVMILTSFMKIVIVLSLLRNALGVQQAPPNQIINGVGLMLSMFIMYPTVV  143
            V+ +L++LPF  M++TS+ KIV+VL+LLRNA+GVQQ PPN ++NGV+L++S F+M P  +
Sbjct  24   VVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM  83

Query  144  EMYEVSQKATQEMQAPDSVISSGSSTYILTIADATKEPLRTFLIDNSSVRHRALFFRMAY  203
            E +  +Q+            +++ ++ I+ + DA +EP+R FL+ +++ R++A+F R A 
Sbjct  84   EAFKAAQNYG----------AGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQ  133

Query  204  KVLPEKYRPNLKPEDFIIVVPSFITSQLKDAFEIGVLIYIPFFVIDLVTSNILLAMGMMM  263
            ++ P      LK++D++I+ P+F  S+L +AF IG L+Y+ F+VIDLV +N L+AMG+  
Sbjct  134  QIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQ  193

Query  264  LSPVTISMPLKLFLLVMLDGWTLLVEGLVNTFR  296
            ++P  +++P+KL+L+V +DGW++L++GLV ++R
Sbjct  194  VTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

112) ascR in NC_009350


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 108/218 (50%), Positives = 160/218 (74%), Gaps = 9/218 (4%)

Query  2    IQLPDELNLIVGlallallPFIAVMATSFVKLAVVFSLLRNALGVQQIPPNMAMYGLAII  61
            +Q+PD  +L++ + +L+LLPF A++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A++
Sbjct  13   MQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  62   LSIYVMAPVGF----ATQDYLRQNEVSLAKSESVEKFLDEGIAPYRDFLKKQIKPREHAF  117
            +S +VMAPVG     A+Q+Y   ++     +  +  +LD    P+R+FL K+   RE AF
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAGSD-----NSRIVVLLDACREPFRQFLLKHTPEREKAF  127

Query  118  FIDSTKQLWPSKYADRLEPDSLLILLPAFTVSELSRAFEIGFLIYLPFIAIDLIISNILL  177
            F+ S++Q+WP   A  L +D LLIL PAFT+SEL+ AF IGFL+YL FI IDL+++N L+
Sbjct  128  FMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALM  187

Query  178  AMGMMMVSPMTISlpfklllfvllDGWARLTHGLVISY  215
            AMG+  V+P  +++PFKLLLFV +DGW+ L HGLV+SY
Sbjct  188  AMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

113) Sbal175_2391 in NC_017571


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 88/203 (44%), Positives = 143/203 (71%), Gaps = 7/203 (3%)

Query  17   LSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAIND  76
            L+LLP+ A++ TS+ K+ +V+++LRNA+G+QQ+PPNM + G+AL+++ F MAPVGM   +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM---E  84

Query  77   NLKATPIVFDAPNVFEQIN---TEAIAPYRAFLDKNTSNTQIEFFANIGHKVWPEKYQQV  133
             +KA+   ++A +   +I         P+R FL K+T++ +  FF   ++++WP      
Sbjct  85   AFKAAQN-YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATT  143

Query  134  LTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTIALPF  193
            L  D LL++ PAFT+S+L EAF+IG+L+YL F+ IDL+V+N L+AMG+  V+P  +A+PF
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  194  KLLIFILMGGWEKLISQLMMSFS  216
            KLL+F+ M+GW  LI  L++S+ 
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSYR  226

114) Sbal117_2090 in NC_017579


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 88/203 (44%), Positives = 143/203 (71%), Gaps = 7/203 (3%)

Query  17   LSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAIND  76
            L+LLP+ A++ TS+ K+ +V+++LRNA+G+QQ+PPNM + G+AL+++ F MAPVGM   +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM---E  84

Query  77   NLKATPIVFDAPNVFEQIN---TEAIAPYRAFLDKNTSNTQIEFFANIGHKVWPEKYQQV  133
             +KA+   ++A +   +I         P+R FL K+T++ +  FF   ++++WP      
Sbjct  85   AFKAAQN-YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATT  143

Query  134  LTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTIALPF  193
            L  D LL++ PAFT+S+L EAF+IG+L+YL F+ IDL+V+N L+AMG+  V+P  +A+PF
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  194  KLLIFILMGGWEKLISQLMMSFS  216
            KLL+F+ M+GW  LI  L++S+ 
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSYR  226

115) Sbal_1974 in NC_009052


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 88/203 (44%), Positives = 143/203 (71%), Gaps = 7/203 (3%)

Query  17   LSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAIND  76
            L+LLP+ A++ TS+ K+ +V+++LRNA+G+QQ+PPNM + G+AL+++ F MAPVGM   +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM---E  84

Query  77   NLKATPIVFDAPNVFEQIN---TEAIAPYRAFLDKNTSNTQIEFFANIGHKVWPEKYQQV  133
             +KA+   ++A +   +I         P+R FL K+T++ +  FF   ++++WP      
Sbjct  85   AFKAAQN-YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATT  143

Query  134  LTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTIALPF  193
            L  D LL++ PAFT+S+L EAF+IG+L+YL F+ IDL+V+N L+AMG+  V+P  +A+PF
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  194  KLLIFILMGGWEKLISQLMMSFS  216
            KLL+F+ M+GW  LI  L++S+ 
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSYR  226

116) Sbal195_2278 in NC_009997


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  158 bits (585),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 88/203 (44%), Positives = 143/203 (71%), Gaps = 7/203 (3%)

Query  17   LSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAIND  76
            L+LLP+ A++ TS+ K+ +V+++LRNA+G+QQ+PPNM + G+AL+++ F MAPVGM   +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM---E  84

Query  77   NLKATPIVFDAPNVFEQIN---TEAIAPYRAFLEKNTSNTQIEFFANIGHKVWPEKYQQV  133
             +KA+   ++A +   +I         P+R FL K+T++ +  FF   ++++WP      
Sbjct  85   AFKAAQN-YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATT  143

Query  134  LTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTIALPF  193
            L  D LL++ PAFT+S+L EAF+IG+L+YL F+ IDL+V+N L+AMG+  V+P  +A+PF
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  194  KLLIFILMGGWEKLISQLMMSFS  216
            KLL+F+ M+GW  LI  L++S+ 
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSYR  226

117) Sbal678_2288 in NC_016901


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  158 bits (585),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 88/203 (44%), Positives = 143/203 (71%), Gaps = 7/203 (3%)

Query  17   LSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAIND  76
            L+LLP+ A++ TS+ K+ +V+++LRNA+G+QQ+PPNM + G+AL+++ F MAPVGM   +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM---E  84

Query  77   NLKATPIVFDAPNVFEQIN---TEAIAPYRAFLEKNTSNTQIEFFANIGHKVWPEKYQQV  133
             +KA+   ++A +   +I         P+R FL K+T++ +  FF   ++++WP      
Sbjct  85   AFKAAQN-YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATT  143

Query  134  LTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTIALPF  193
            L  D LL++ PAFT+S+L EAF+IG+L+YL F+ IDL+V+N L+AMG+  V+P  +A+PF
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  194  KLLIFILMGGWEKLISQLMMSFS  216
            KLL+F+ M+GW  LI  L++S+ 
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSYR  226

118) STAUR_3046 in NC_014623


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  158 bits (585),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 88/203 (44%), Positives = 149/203 (74%), Gaps = 8/203 (3%)

Query  74   VPFMLMMVTSFVKISVVLSIVRSALGTQQIPPTQVITGLAVILTVYIMAPVGQEMYKAAK  133
            +PF  M+VTS+ KI VVL+++R+A+G QQ+PP  V+ G+A++++ ++MAPVG E +KAA 
Sbjct  31   LPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-  89

Query  134  VDIWAKGPSLLSSETVGTLLEAADRSKEPLRDFLVKKVKNKDRALFFHLAKKMRKAEDRK  193
             +  + G+    +  +  LL+A    +EP+R+FL+K   ++++A+F + A++++  +   
Sbjct  90   -QNYGAGSD---NSRIVVLLDA---CREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKAT  142

Query  194  DIGDRDFMIIIPAFVVSELKEAFQIGFLLFVPFIVIDMVVANILLALGMHMLSPTTISMP  253
             +   D++I+ PAF +SEL EAF+IGFLL++ FIVID+VVAN L+A+G+  ++PT +++P
Sbjct  143  TLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIP  202

Query  254  FKLLLFVLVDGWYLIAKGLVVGY  276
            FKLLLFV +DGW ++  GLV++Y
Sbjct  203  FKLLLFVAMDGWSMLIHGLVLSY  225

119) MXAN_2447 in NC_008095


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  158 bits (585),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 86/206 (42%), Positives = 153/206 (75%), Gaps = 8/206 (3%)

Query  25   MGLVPFALMMATSFVKISVVLSIVRSALGTQQIPPTQVITGLAIILTVYIMAPVGQQMYR  84
            +GL+PFA M+ TS+ KI VVL+++R+A+G QQ+PP  V+ G+A++++ ++MAPVG + ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  85   AAGLDIWAKGPGVFSSETVGSMLGAANKSKEPLREWLIKKVTTKDRALFFNLAKKMRKGE  144
            AA  +  + G++   +  +  +L+A    +EP+R+ L+K    +++A+F   A++++  +
Sbjct  88   AA--QNYGAGSD---NSRIVVLLDA---CREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  145  DRDAVESNDFMVIIPAFVVSELKEAFQIGFLLFVPFIVIDMVVANILLALGMHMLSPTTI  204
               ++ S+D++++ PAF +SEL EAF+IGFLL++ FIVID+VVAN L+A+G+  ++PT +
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  205  SMPFKLLLFVLVDGWYLIAKGLVVGY  230
            ++PFKLLLFV +DGW ++  GLV++Y
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

120) SVI_2230 in NC_014012


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  157 bits (579),  Expect = 5e-40, Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 142/200 (71%), Gaps = 1/200 (0%)

Query  17   LSILPLFAVMGTSFLKLSIVLSMLRNALGIQQIPPNMAIYGLSLILTLFIMAPIGMEIND  76
            L++LP+ A++ TS+ K+ +VL++LRNA+G+QQ+PPNM + G++L+++ F+MAP+GME   
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  77   NLKVHPIVFDSANIIEQVNTLAIIPYRDFLEKNTSKTQLDFFANIGHKTWPDKYQDVLSK  136
              +      D++ I+  +++    P+R+FL K+T+  +  FF   +++ WP      L  
Sbjct  88   AAQNYGAGSDNSRIVVLLDA-CREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  137  DSLFVMLPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTISLPFKLL  196
            D L+++ PAFT+S+L EAF+IG+L+YL F+ IDL+V+N L+AMG+  V+P  +++PFKLL
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  197  IFILMGGWEKLVSQLMVSFS  216
            +F+ M+GW  L+  L++S+ 
Sbjct  207  LFVAMDGWSMLIHGLVLSYR  226

121) pscR in NC_011770


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  157 bits (579),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 99/190 (53%), Positives = 144/190 (76%), Gaps = 1/190 (0%)

Query  26   MATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLRNHDVSL  85
            + TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG  +    +N + + 
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG-  95

Query  86   SDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSLLILLPA  145
            SD++ +  +LD    P+R+FL ++  ERE +FFM S++Q+WP + A  L +D LLIL PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  146  FTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfvllDGWA  205
            FT+SELT AF IGFL+YL FI IDL+++N L+AMG+  V+P  +++PFKLLLFV +DGW+
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  206  RLTHGLVISY  215
             L HGLV+SY
Sbjct  216  MLIHGLVLSY  225

122) Y11_35451 in NC_017564


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 90/188 (48%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  28   TSFLKLSIVLSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVHARLQDEPLPNDL  87
            TS+ K+ +VL+LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     Q+    +D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   GALLYHIDEHALEPYRDFLQRNTDAAQVHFFNDIVQTKWPVRYRDTIKPNSLLILMPAFT  147
            + ++  +D    EP+R+FL ++T   +  FF    Q  WP     T+K++ LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  148  LSQLTEAFKIGLLLYLPFVAIDLIVSNILLAMGMMMVSPITISLPFKLLIFILIDGWGLL  207
            LS+LTEAF+IG+LLYL F+ IDL+V+N L+AMG+  V+P  +++PFKLL+F+ +DGW++L
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  208  LGQLVGSY  215
            +  LV SY
Sbjct  218  IHGLVLSY  225

123) REMIM1_PE00285 in NC_021909


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  155 bits (570),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 134/189 (71%), Gaps = 7/189 (3%)

Query  31   FIKVSVVLFLVRNALGTQTIPPNIVLYAAALILTLFISAPVIEQTYIRIADPKLRYQTLD  90
            + K+ VVL L+RNA+G Q +PPN+VL + AL+++ F+ APV  +++     +   Y +  
Sbjct  41   YTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAF----KAAQNYGAGS  96

Query  91   DW---VTAAEEGREPLRDYLKKFTSEEQRRFFLSSTKQVWPEEMRARTTPDDFAILVPSF  147
            D    V   +  REP+R++L K T+E ++ FF+ S++Q+WP +  +   +DD+ IL P+F
Sbjct  97   DNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAF  156

Query  148  LISELKRAFEIGFLLYLPFICIDLIVTTILMAMGMSMVSPTVIAVPFKLFLFVTIDGWSQ  207
             +SEL  AF IGFLLYL FI IDL+V+  LMAMG+S V+PT +A+PFKL+LFV++DGWS 
Sbjct  157  TLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSM  216

Query  208  LMHGLVLSY  216
            L+HGLVLSY
Sbjct  217  LIHGLVLSY  225

124) ETAC_04225 in NC_020796


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  154 bits (568),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 84/188 (45%), Positives = 132/188 (71%), Gaps = 0/188 (0%)

Query  28   TSFLKLSVVFALLRNALGIQQIPPNIALYGLALILTLFIMTPVGTAVQARLADAPAEAQT  87
            TS+ K+ VV++LLRNA+G+QQ+PPN+ L G+AL+++ F+M+PVG        +  A ++ 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   TLLARLSDNTLDPYRQFLRQHTSATQLHFFRQVATKSWPASVREQISDDSLLLLMPAFAV  147
            + +  L D   +P+RQFL +HT+  +  FF + A + WP      +  D LL+L PAF++
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVGGWDKLL  207
            S+L EAF+IG+LL+L FI IDL+V+N L+AMG+  V+P  +++PFKLL+F+ ++GW  L+
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  GQLLLSYR  215
              L+LSYR
Sbjct  219  HGLVLSYR  226

125) esaR in NC_013508


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  154 bits (568),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 84/188 (45%), Positives = 132/188 (71%), Gaps = 0/188 (0%)

Query  28   TSFLKLSVVFALLRNALGIQQIPPNIALYGLALILTLFIMTPVGTAVQARLADAPAEAQT  87
            TS+ K+ VV++LLRNA+G+QQ+PPN+ L G+AL+++ F+M+PVG        +  A ++ 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   TLLARLSDNTLDPYRQFLRQHTSATQLHFFRQVATKSWPASVREQISDDSLLLLMPAFAV  147
            + +  L D   +P+RQFL +HT+  +  FF + A + WP      +  D LL+L PAF++
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVGGWDKLL  207
            S+L EAF+IG+LL+L FI IDL+V+N L+AMG+  V+P  +++PFKLL+F+ ++GW  L+
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  GQLLLSYR  215
              L+LSYR
Sbjct  219  HGLVLSYR  226

126) esaR in NC_017309


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  154 bits (568),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 84/188 (45%), Positives = 132/188 (71%), Gaps = 0/188 (0%)

Query  28   TSFLKLSVVFALLRNALGIQQIPPNIALYGLALILTLFIMTPVGTAVQARLADAPAEAQT  87
            TS+ K+ VV++LLRNA+G+QQ+PPN+ L G+AL+++ F+M+PVG        +  A ++ 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   TLLARLSDNTLDPYRQFLRQHTSATQLHFFRQVATKSWPASVREQISDDSLLLLMPAFAV  147
            + +  L D   +P+RQFL +HT+  +  FF + A + WP      +  D LL+L PAF++
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVGGWDKLL  207
            S+L EAF+IG+LL+L FI IDL+V+N L+AMG+  V+P  +++PFKLL+F+ ++GW  L+
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  GQLLLSYR  215
              L+LSYR
Sbjct  219  HGLVLSYR  226

127) sctR in NC_012962


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  154 bits (567),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 99/196 (51%), Positives = 144/196 (74%), Gaps = 9/196 (4%)

Query  24   AVMATSFLKLAVVFSLLRNALGVQQIPPNMAMYGLAIILTIYVMAPVGF----ATQDYLR  79
            A++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A++++ +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNY--  92

Query  80   QNEVSFSNAQSVEKFLEEGMAPYRNFLKQHIKSSERTFFIDSTRQIWPSQYANRLEPDSL  139
                + S+   +  +L+    P+R+FL +H    E++FF+ S++QIWP + A  L +D L
Sbjct  93   ---GAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  LILLPAFTVSELTRAFEIGFLLYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            LIL PAFT+SELT AF IGFLLYL FI IDL+++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

128) YE105_C0338 in NC_015224


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  154 bits (567),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 89/188 (48%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  28   TSFLKLSIVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVHARLQDEPLPNDL  87
            TS+ K+ +V++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     Q+    +D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   GALLYHIDEHALEPYRDFLQRNTDAAQVHFFNDIVQTKWPVRYRDTIKPNSLLILMPAFT  147
            + ++  +D    EP+R+FL ++T   +  FF    Q  WP     T+K++ LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  148  LSQLTEAFKIGLLLYLPFVAIDLIVSNILLAMGMMMVSPITISLPFKLLIFILIDGWGLL  207
            LS+LTEAF+IG+LLYL F+ IDL+V+N L+AMG+  V+P  +++PFKLL+F+ +DGW++L
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  208  LGQLVGSY  215
            +  LV SY
Sbjct  218  IHGLVLSY  225

129) Meso_0110 in NC_008254


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  154 bits (567),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 91/211 (44%), Positives = 146/211 (70%), Gaps = 1/211 (0%)

Query  8    PAILPTIIAVMALSFIPFIVVMGTAFTKISIVLMLLRNAIGVQQAPSGLVINSIALTLTV  67
            P + + ++ V+ L+++PF  ++ T++TKI +VL LLRNAIGVQQ P+ +V+N++AL ++ 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  68   FVMVPVGNAIITQVQQQQLGFTGWENVSQLYSVVSEAFTGYLKQFSSPRELQFFMDAARK  127
            FVM PVG   +   Q+   G ++   +  L     E+F  +L + ++ RE  FFM +A++
Sbjct  76   FVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQ  134

Query  128  MWPETLHGQITTDNVFILLPAHVTSELTRAFQIAFLIFLPFVVVDMVVSNILLAMGAMMV  187
            +WP      + +D+++IL PA   SELT AF+I+FL++L F+V+D+VV+N L+AMG   V
Sbjct  135  IWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQV  194

Query  188  PPMLVSLPIKILLFVAADGWALLLHNLVLSY  218
             P  V++P+K+LLFVA DGW++L+H LVLSY
Sbjct  195  TPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

130) hrcR in NC_014323


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 86/191 (46%), Positives = 136/191 (72%), Gaps = 4/191 (2%)

Query  29   TSFLKISLVLLVLRNAIGVQQVPPTLAIYGIALALSVFIMAPTVQEVGKRAMAVDVSHPA  88
            TS+ KI +VL +LRNAIGVQQVPP + + G+AL +S F+MAP   E  K A   + + + 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG-SD  97

Query  89   ASRTVPILERAQDAFDPLRKFMLKMSHAEQREMFLASAKKLWPKEAAKDAQPTDALILIP  148
             SR V +L+  +++F   R+F+LK +   ++  F+ SA+++WPK+ A   ++ D LIL P
Sbjct  98   NSRIVVLLDACREPF---RQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  149  AFVVSELQTGYEIGFLIYIPFVVIDLLISNLLMALGMQQVSPQTITIPLKLLLFTLVGGW  208
            AF +SEL  ++ IGFL+Y+ F+VIDL+++N LMA+G+ QV+P  ++IP+KLLLF  ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  209  AKLLNALAMSY  219
            + L+++L +SY
Sbjct  215  SMLIHGLVLSY  225

131) hrcR in NC_010996


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  153 bits (565),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 88/208 (43%), Positives = 155/208 (75%), Gaps = 7/208 (3%)

Query  11   LVAMAAISMLPVIAVIATSFTKISVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPV  70
            L+ +  +++LP  A++ TS+TKI VVL ++RNAIG+QQ PPN+++ ++A+++S FVM PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  71   LQNSWQLLLAHSGDFGTVSGMADGMIKVAA---PLKDFMLKFSDAEVRDFFVQASQKIWA  127
              ++ +     + ++G+ S+ +  ++ + A   P+++F+LK +    + FF++++Q+IW+
Sbjct  82   GMEAFK----AAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWP  137

Query  128  NAPATSIASDDITVLTPSFLVSELTRAFEIGFLIYLPFLMIDFAVSAILVALGMQMMSPT  187
            +  AT++ SDD+ +L+P+F +SELT AF IGFL+YL F++ID+ V+  L+A+G+  ++PT
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  188  VVSTPLKLLLFVSIDGWRRLLEGLVLSY  215
             V+ P+KLLLFV++DGW  L++GLVLSY
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

132) RHE_PD00059 in NC_004041


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  152 bits (561),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 87/202 (44%), Positives = 151/202 (75%), Gaps = 7/202 (3%)

Query  17   ISMLPVIAVIATSFTKISVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPVLQNSWQ  76
            +++LP  A++ TS+TKI VVL ++RNAIG+QQ PPN+++ ++A+++S FVM PV  ++ +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  77   LLLAHSGDFGTVSGMADGMIKVAA---PLKDFMLKFSDAEVRDFFVQASQKIWANAPATP  133
                 + ++G+ S+ +  ++ + A   P+++F+LK +    + FF++++Q+IW++  AT 
Sbjct  88   ----AAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATT  143

Query  134  IASDDITVLTPSFLVSELTRAFEIGFLIYLPFLMIDFAVSAILVALGMQMMSPTVVSTPL  193
            + SDD+ +L+P+F +SELT AF IGFL+YL F++ID+ V+  L+A+G+  ++PT V+ P+
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  194  KLLLFVSIDGWRRLLEGLVLSY  215
            KLLLFV++DGW  L++GLVLSY
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSY  225

133) JCM7686_1775 in NC_022041


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 94/209 (45%), Positives = 143/209 (69%), Gaps = 4/209 (1%)

Query  6    PLLIAAAGLMVVPFIVVSLTAFVKIAVVLFLVRSALGVQQTPPNLVLYGVTIVLTGYVMS  65
            +LL+    L ++PF  + +T++ KI VVL L+R+A+GVQQ PPN+VL GV+++++ +VM+
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  66   PVLAASFAEMTNGGQMDALPPPSEWPGLIQRGLGPVREFLMRFTTPVDRAFFLSAAEEM-  124
            PV   +F    N G     +       L++    P R+FL++ T   ++AFF+ +A+++ 
Sbjct  80   PVGMEAFKAAQNYGAGSDNSRIV---VLLDACREPFRQFLLKHTPEREKAFFMRSAQQIW  136

Query  125  HKTSGVVPSEQDLFILAPAFVTAELTRAFEIGVMLYLPFIVVDLVITNILTAMGMMMVSP  184
             K  +     +DL+ILAPAF  +ELT AF IG +LYL FIV+DLV++N L AMG+  V+P
Sbjct  137  PKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTP  196

Query  185  TVISLPFKLLLFVAVDGWARLTHGLVMSY  213
            T +++PFKLLLFVA+DGW+ L HGLV+SY
Sbjct  197  TNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

134) escR in NC_005085


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  151 bits (558),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 140/200 (70%), Gaps = 1/200 (0%)

Query  17   LSILPLLVVLGTSFLKLAVVFALLRNALGIQQIPPNIALYGLALILTLFIMAPIGLEIQD  76
            L++LP+  ++ TS+ K+ VV++LLRNA+G+QQ+PPN+ L G+AL+++ F+MAP+G+E   
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  77   NLIAHPIKIESPAFIQQVESGVFTPYRVFLERNTAPEQVHFFADIGHQIWPEKYQQRIPD  136
                     +++ ++  +++    P+R FL ++T+  +  FF   ++QIWP      +  
Sbjct  88   AAQNYGAGSDNSRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  137  NSLLVLMPAFTVSQLIEAFKIGLLLFLPFVAIDLVVSNVLLAMGMMMVSPMTISMPLKLL  196
            + LL+L PAFT+S+L EAF+IG+LL+L F+ IDLVV+N L+AMG+  V+P  +++P+KLL
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  197  VFVLMNGWEKLLGQLVLSFS  216
            +FV M+GW  L+  LVLS+ 
Sbjct  207  LFVAMDGWSMLIHGLVLSYR  226

135) PSPPH_2535 in NC_005773


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 97/212 (46%), Positives = 158/212 (75%), Gaps = 3/212 (1%)

Query  6    PNLIEIILVVATIGLIPLAVVTLTGFMKISVVLFLIRNALGVQQTPPNLVLYGIALILSV  65
            P++  ++LVV  +GL+P+A + +T++ KI VVL L+RNA+GVQQ PPN+VL G+AL++S 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  66   YVTTPLIGDMYREVQGRDLSLQNVQQLEELGSALCP-TLQAHLSKFANESERGFFVQATE  124
            +V +P+  + ++  Q  + + +N + +  L++  C   ++  L K + E E++FF+++++
Sbjct  76   FVMAPVGMEAFKAAQNYGAGSDNSRIVVLLDA--CREPFRQFLLKHTPEREKAFFMRSAQ  133

Query  125  TIWSPEaradlrdddlvvlIPAFVSSELTRAFEIGFLLYIPFLVVDLLVSNVLMAMGMSM  184
             IW+ +  + L+ DDL++L PAF  SELT AF IGFLLY+ F+V+DL+V+N LMAMG+S 
Sbjct  134  QIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQ  193

Query  185  VSPTLISIPLKIFLFVALSGWSRLMHGLILSY  216
            V+PT ++IP+K++LFVA+ GWS L+HGL+LSY
Sbjct  194  VTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

136) sctR in NC_005126


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (550),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 94/194 (49%), Positives = 142/194 (74%), Gaps = 7/194 (3%)

Query  25   VMATSFLKLAVVFSLLRNALGVQQIPPNMAMYGLAIILTIYVMAPVGFATQDYLRQNEVS  84
            ++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A++++ +VMAPVG   + +  +   +
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM--EAF--KAAQN  91

Query  85   FSNAQSVDKFV---EEGLTPYRNFLKQHIKPSERTFFIDSTRQIWPSQYADRLEPDSLLI  141
            ++ +    ++V   +    P+R+FL +H    E++FF+ S++QIWP + A  L +D LLI
Sbjct  92   YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLI  151

Query  142  LLPAFTVSELTRAFEIGFLLYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfvll  201
            L PAFT+SELT AF IGFLLYL FI IDL+++N L+AMG+  V+P  +++PFKLLLFV +
Sbjct  152  LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAM  211

Query  202  DGWTRLTHGLVISY  215
            DGW+ L HGLV+SY
Sbjct  212  DGWSMLIHGLVLSY  225

137) A1122_03785 in NC_017168


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  228  LGQLVGSY  235
            +  LV SY
Sbjct  218  IHGLVLSY  225

138) epaP in NC_010159


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  208  LGQLVGSY  215
            +  LV SY
Sbjct  218  IHGLVLSY  225

139) YPA_4012 in NC_008150


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  228  LGQLVGSY  235
            +  LV SY
Sbjct  218  IHGLVLSY  225

140) fliP1 in NC_005810


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  228  LGQLVGSY  235
            +  LV SY
Sbjct  218  IHGLVLSY  225

141) YPO0270 in NC_003143


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  208  LGQLVGSY  215
            +  LV SY
Sbjct  218  IHGLVLSY  225

142) YPD4_0235 in NC_017154


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  208  LGQLVGSY  215
            +  LV SY
Sbjct  218  IHGLVLSY  225

143) YPD8_0240 in NC_017160


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  208  LGQLVGSY  215
            +  LV SY
Sbjct  218  IHGLVLSY  225

144) y0530 in NC_004088


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  228  LGQLVGSY  235
            +  LV SY
Sbjct  218  IHGLVLSY  225

145) YPN_3397 in NC_008149


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  228  LGQLVGSY  235
            +  LV SY
Sbjct  218  IHGLVLSY  225

146) YPDSF_3700 in NC_009381


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  228  LGQLVGSY  235
            +  LV SY
Sbjct  218  IHGLVLSY  225

147) YPZ3_0233 in NC_014029


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  208  LGQLVGSY  215
            +  LV SY
Sbjct  218  IHGLVLSY  225

148) epaP in NC_009708


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  208  LGQLVGSY  215
            +  LV SY
Sbjct  218  IHGLVLSY  225

149) YPTB0327 in NC_006155


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  228  LGQLVGSY  235
            +  LV SY
Sbjct  218  IHGLVLSY  225

150) YPTS_0351 in NC_010634


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  228  LGQLVGSY  235
            +  LV SY
Sbjct  218  IHGLVLSY  225

151) YPK_3902 in NC_010465


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 136/188 (73%), Gaps = 1/188 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            T++ K+ VV++LLRNA+GVQQVPPN+ + G+AL+++ F+MAPVG++     QN   ++D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            + +   +D     P+R+FL ++T   + +FF    Q+ WP     ++K+D LLIL PAFT
Sbjct  99   SRIVVLLDACR-EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L EAF+IG+LL+L F+ IDL+V+N L+AMG+  V+P  +++PFKLL+FV +DGWS++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  228  LGQLVGSY  235
            +  LV SY
Sbjct  218  IHGLVLSY  225

152) SG1305 in NC_007712


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 81/187 (44%), Positives = 133/187 (72%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVLSILRNALGIQQVPPNMALYGLALILSLFIMAPTALAVKAQWHPVAAPGDT  87
            TS+ K+ VVL++LRNA+G+QQVPPNM L G+AL++S F+MAP ++      +  +A +D 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   PWASGWDGKALMPYRQFLRRNADEKEIRYFHQLVTKTWPEEARRRVRPDSLLILLPAFTV  147
            ++     +    P+RQFL +++ E+E  +F +   + WP +    +++D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLSQAFRIGLLIYLPFLAIDLLVSNVLLAMGMMMVSPMTISLPFKLLIFMLAGGWDLIL  207
            S+L++AFRIG+L+YL F+ IDL+V+N L+AMG+  V+P  +++PFKLL+F+  +GW +++
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  SQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

153) yscR in NC_008791


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

154) YE105_P0026 in NC_015475


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

155) Y11_p0741 in NC_017565


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

156) yscR in NC_010157


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

157) YPA_CD0018 in NC_008122


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

158) yscR in NC_005813


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

159) yscR in NC_003131


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

160) yscR in NC_017153


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

161) yscR in NC_017157


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

162) YPDSF_3973 in NC_009377


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

163) yscR in NC_014017


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

164) pYV0071 in NC_006153


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

165) YPTS_4289 in NC_010635


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 100/196 (52%), Positives = 146/196 (75%), Gaps = 9/196 (4%)

Query  24   SVMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGF----ATQDYLQ  79
            +++ TS+ K+ VV++LLRNA+GVQQ+PPNM + G+A+++S +VMAPVG     A+Q+Y  
Sbjct  35   AMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA  94

Query  80   ANEVSLTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSL  139
            +++ S      +  ++D    P+R FL +H   +E +FF+ S++Q+WPK+ A  L SD L
Sbjct  95   GSDNS-----RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  140  FILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfv  199
            +IL PAFT+SELT AF IGFL+YL FIVIDLV++N L+AMG+  V+P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  200  llDGWTRLTHGLVISY  215
             +DGW+ L HGLV+SY
Sbjct  210  AMDGWSMLIHGLVLSY  225

166) MYSTI_06240 in NC_020126


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  147 bits (543),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/197 (45%), Positives = 146/197 (75%), Gaps = 3/197 (1%)

Query  42   FAVLMLTSFSKIAVVLSLARSAMGTQQAPPtvvltglavvltgHIMASVMERMYDAGQLA  101
            FA +++TS++KI VVL+L R+A+G QQ PP +VL G+A++++  +MA+V    + A+Q  
Sbjct  33   FAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQ-N  91

Query  102  YQEMETGSGTKILESAAKVAEPLRTFLVKHGSAEERARFVDLARELRPPEEADTVSETDL  161
            Y      S   +L  A +  EP+R FL+KH +  E+A F+  A++++P + A T+   DL
Sbjct  92   YGAGSDNSRIVVLLDACR--EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  162  FVVIPAFVITELKEAFQIGFLVFLPFLVLDMVIANVLLALGMQTLSPSQVSLPFKILLFV  221
            +++ PAF ++EL EAF+IGFL++L F+V+D+V+AN L+A+G+  ++P++V++PFK+LLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  222  AVDGWSLLARGLILGYR  238
            A+DGWS+L +GL+L+YR
Sbjct  210  AMDGWSMLIHGLVLSYR  226

167) hrcR in NC_011983


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  147 bits (543),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 86/202 (43%), Positives = 143/202 (71%), Gaps = 7/202 (3%)

Query  18   ISILPVIAVVATSFTKIAVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPILQQCWQ  77
            +++LP  A+V TS+TKI VVL ++RNAIG+QQ PPN+++ ++A+++S FVM P+  +   
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGME---  84

Query  78   VLLRADVHFDTING---LAAGLSEVGAPLKAFMMKFSDEEVRQFFVNSSQRIWGDTATLP  134
              ++A  ++++ ++   +   L     P++ F++K + E  + FF+ S+Q+IW    +  
Sbjct  85   -AFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATT  143

Query  135  ASPDDITVLTPSFLVSELTRAFEIGFLLYLPFLMIDFAVSAILVALGMQMMSPTVVSTPF  194
              +DD+ +L+P+F +SELT AF IGFLLYL F++ID+ V+  L+A+G+  ++PT V+ PF
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  195  KLLLFVGVDGWRRLLEGLVLSY  216
            KLLLFV++DGW  L++GLVLSY
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSY  225

168) SFHH103_04305 in NC_018294


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 85/180 (48%), Positives = 127/180 (71%), Gaps = 7/180 (3%)

Query  40   LVRNALGTQTIPPNIVLYAAALILTMFVSAPIAEQTYDRITDPRLRYQSLDDWAEAA---  96
            L+RNA+G Q +PPN+VL + AL+++ FV AP++ +++    +    Y +  D +      
Sbjct  50   LLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN----YGAGSDNSRIVVLL  105

Query  97   KAGSQPLLEHLKKFTNEEQRRFFLSSTEKVWPEEMRARVTADDFAILVPSFLISELKRAF  156
             A  +P+ + L K T E ++ FF+ S++++WP +  + + +DD+ IL P+F +SEL  AF
Sbjct  106  DACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAF  165

Query  157  EIGFLLYLPFIVIDLIVTTILMAMGMSMVSPTIIAVPFKLFLFVAIDGWSRLMHGLVLSY  216
             IGFLLYL FIVIDL+V+  LMAMG+S V+PT +A+PFKL+LFVA+DGWS L+HGLVLSY
Sbjct  166  RIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

169) USDA257_p02850 in NC_018179


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 85/180 (48%), Positives = 127/180 (71%), Gaps = 7/180 (3%)

Query  40   LVRNALGTQTIPPNIVLYAAALILTMFVSAPIAEQTYDRITDPRLRYQSLDDWAEAA---  96
            L+RNA+G Q +PPN+VL + AL+++ FV AP++ +++    +    Y +  D +      
Sbjct  50   LLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN----YGAGSDNSRIVVLL  105

Query  97   KAGSQPLLEHLKKFTNEEQRRFFLSSTEKVWPEEMRARVTADDFAILVPSFLISELKRAF  156
             A  +P+ + L K T E ++ FF+ S++++WP +  + + +DD+ IL P+F +SEL  AF
Sbjct  106  DACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAF  165

Query  157  EIGFLLYLPFIVIDLIVTTILMAMGMSMVSPTIIAVPFKLFLFVAIDGWSRLMHGLVLSY  216
             IGFLLYL FIVIDL+V+  LMAMG+S V+PT +A+PFKL+LFVA+DGWS L+HGLVLSY
Sbjct  166  RIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

170) Bxe_A3122 in NC_007951


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 92/199 (47%), Positives = 143/199 (72%), Gaps = 5/199 (2%)

Query  16   MLGLLPLAVAMTTSFTKFSIVLTLLRSALGVQQAPSNLVISGMALAATLVVMAP-TLSKI  74
            MLGLLP+A  + TS+TK+ +VL LLR+A+GVQQ P+N+V++G+AL  +  VMAP  +  +
Sbjct  27   MLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAF  86

Query  75   EAALDTGDGA-MPRPTELVQAVRGPLGEFMLKHSRLEERQFLVSAAKRIDPEHEA---HD  130
             AA + G G+  +R   L++A R P+ +F+LKH+   E+ F++ +A++I P + A     
Sbjct  87   KAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  131  TDLQLLIPAFLISEISSGFEAGFLLYIAFLVVDLVVANVLSAMGMMMLSPSTVSIPLKLF  190
             DL +L PAF +SE++ +F  GFLLY+ F+V+DLVVAN L AMG+  ++P+ V+IP+KL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  191  IFVSASGMSKLMHGLIVSY  209
            +FV+  G S L+HGL++SY
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

171) rhcR in NC_000914


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  146 bits (538),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 86/180 (48%), Positives = 127/180 (71%), Gaps = 7/180 (3%)

Query  40   LVRNALGTQTIPPNIVLYAAALILTMFVSAPVAEQTYDRITDPRLRYQSLDDWAEAA---  96
            L+RNA+G Q +PPN+VL + AL+++ FV APV+ +++    +    Y +  D +      
Sbjct  50   LLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN----YGAGSDNSRIVVLL  105

Query  97   KAGSQPLLEHLKKFTNEEQRRFFLSSTEKVWPEEMRAGVTADDFAILVPSFLISELKRAF  156
             A  +P+ + L K T E ++ FF+ S++++WP +  + + +DD+ IL P+F +SEL  AF
Sbjct  106  DACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAF  165

Query  157  EIGFLLYLPFIVIDLIVTTILMAMGMSMVSPTIIAVPFKLFLFVAIDGWSRLMHGLVLSY  216
             IGFLLYL FIVIDL+V+  LMAMG+S V+PT +A+PFKL+LFVA+DGWS L+HGLVLSY
Sbjct  166  RIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

172) fliP1 in NC_017030


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 80/189 (43%), Positives = 139/189 (74%), Gaps = 1/189 (0%)

Query  53   TSFSKIAVVLSLARSAMGTQQAPPtvvltglavvltgHIMAPVMERMYDAGQAAYDEVHS  112
            TS++KI VVL+L R+A+G QQ PP +VL G+A++++  +MAPV    + A+Q  Y+    
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN-YGAGSD  97

Query  113  GAQVLSAAKQVTEPLRAFLMKHGGPEERARFVDLARELRPPEESEQVQETDLFVVIPAFV  172
             ++++       EP+R FL+KH    E+A F+  A++++P + +  ++  DL+++ PAF 
Sbjct  98   NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  173  ITELKEAFQIGFIVFLPFLVLDMVIANVLLALGMQTLSPGQVSLPFKILLFVAVDGWALL  232
            ++EL EAF+IGF+++L F+V+D+V+AN L+A+G+  ++P +V++PFK+LLFVA+DGW++L
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  233  ARGLILGYR  241
             +GL+L+YR
Sbjct  218  IHGLVLSYR  226

173) mlr8766 in NC_002678


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  144 bits (530),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 85/180 (48%), Positives = 125/180 (70%), Gaps = 7/180 (3%)

Query  40   LVRNALGTQTIPPNIALYAVALILTMFLSAPVVEQTYDRMTDPKLHYQTFDDWVSAA---  96
            L+RNA+G Q +PPN+ L +VAL+++ F+ APV  +++     +  +Y +  D        
Sbjct  50   LLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK----AAQNYGAGSDNSRIVVLL  105

Query  97   KSGSEPLRDHLKKFTNEEQRQFFLSSTEKVWPAEMRAKATVDDLSILVPSFLISELKRAF  156
             +  EP+R+ L K T E ++ FF+ S++++WP +  +    DDL IL P+F +SEL  AF
Sbjct  106  DACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAF  165

Query  157  EIGFLLYLPFIVIDLIVTTILMAMGMSMVSPTLISVPFKLFVFVAIDGWSKLMHGLVLSY  216
             IGFLLYL FIVIDL+V+  LMAMG+S V+PT +++PFKL++FVA+DGWS L+HGLVLSY
Sbjct  166  RIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

174) C770_GR4pB210 in NC_019847


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  144 bits (529),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 150/208 (73%), Gaps = 7/208 (3%)

Query  11   LAAMVAISVLPVIAVVATSFTRISVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPV  70
            L  ++ +++LP  A+V TS+T+I VVL ++RNAIG+QQ PPN+++ ++A+++S FVM PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  71   LQSSWQLLILHGADFSTVGGMADGMVKVGA---PLKEFMTKFSDEEVRGFFVEASQKIWV  127
               + +     + ++++ ++ +  +V ++A   P+++F+ K + E  ++FF+ ++Q+IW 
Sbjct  82   GMEAFK----AAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWP  137

Query  128  DAPTIPIASDDVTILTPSFLVSELTRAFEAGFLIYLPFLMIDFAVSAILVALGMQMMSPT  187
               +  + SDD+ IL+P+F +SELT AF  GFL+YL F++ID+ V+  L+A+G+  ++PT
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  188  VVSTPIKLLLFVSIDGWRRLLEGLVLSY  215
             V+ P+KLLLFV++DGW  L++GLVLSY
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

175) NT01EI_0960 in NC_012779


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  144 bits (529),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 133/188 (71%), Gaps = 0/188 (0%)

Query  28   TSFLKLSVVFALLRNALGIQQIPPNlalyglaliltlFIMTPVGTAVQARLADAPAQAQT  87
            TS+ K+ VV++LLRNA+G+QQ+PPN+ L G+AL+++ F+M+PVG        +  A ++ 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   TLLSRLSDNTLDPYRQFLRQHTSAKQLKFFRQVATKSWPASVREKISDNSLLLLMPAFAV  147
            + +  L D   +P+RQFL +HT+ ++  FF + A + WP      +  + LL+L PAF++
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVGGWDKIL  207
            S+L EAF+IG+LL+L FI IDL+V+N L+AMG+  V+P  +++PFKLL+F+ ++GW  ++
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  GQLLLSYR  215
              L+LSYR
Sbjct  219  HGLVLSYR  226

176) fliP in NC_004557


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  144 bits (529),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 87/211 (42%), Positives = 146/211 (70%), Gaps = 13/211 (6%)

Query  60   KLFLMITALSILPSFIVMMTSFVRISVVFGFLRNAMGTQQSPPNQVLVGLALFLTIFIMT  119
             L+L++  L++LP   +++TS+ +I VV+G+LRNA+G QQ PPN VL G+AL+++ F+M+
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  120  PVYQIINKEAIQPFVKSEINQEQA-----FETGSKPLREFMLKQTREKDLKLFV----EI  170
            PV      EA+++  +     +++     +++   P+R+F+LK+T E++  +F+    +I
Sbjct  80   PV----GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQI  135

Query  171  SNIDKNITKENVPLYVVVPSFIISELKTAFQIGFLLYIPFLVIDLVVASVLMSMGMFMLP  230
               DK  T  +  L ++ P+F +SEL  AF+IGFLLY+ F+VIDLVVA+ LM+MG+  + 
Sbjct  136  WPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVT  195

Query  231  PVMVSLPFKLLLFVMVDGWHLLIKSLIMSFK  261
            P  V++PFKLLLFV +DGW +LI +L++S++
Sbjct  196  PTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

177) rscR in NC_012660


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  144 bits (528),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 85/191 (45%), Positives = 136/191 (72%), Gaps = 7/191 (3%)

Query  29   TAFLKIVIVLMITRNAIGVQQVPPSMAINGIALATTLFIMAPVG---YEIAESVKALPLD  85
            T++ KIV+VL + RNAIGVQQVPP+M +NG+AL  + F+MAPVG   +  A++  A + D
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGS-D  97

Query  86   LSNVQTLLQTANEAIKPLRAFMLRNIDPDVLTHLLENTARLWPAQMAQEVQREDLILLIP  145
             S +  LL++  E   P+R F+L++      + ++ ++ ++WP + A  ++ +DL++L P
Sbjct  98   NSRIVVLLDACRE---PFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  146  AFVLSQLQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVMVSGW  205
            AF LS+L  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV + GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  206  SRLLDSLFLSY  216
            S L+++L LSY
Sbjct  215  SMLIHGLVLSY  225

178) SARI_01563 in NC_010067


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  143 bits (525),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 128/187 (69%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVADAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    +   
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWMSEWDSKALAPYRQFLQKNSEEKEASYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             ++         P+RQFL K++ E+E ++F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

179) ssaR in NC_021820


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

180) epaP in NC_011149


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AKLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

181) ssaR in NC_021844


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

182) SBOV14161 in NC_022241


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

183) ssaR in NC_006905


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

184) ssaR in NC_021818


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

185) epaP in NC_011205


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

186) ssaR in NC_011294


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

187) ssaR in NC_011274


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

188) ssaR in NC_022221


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

189) ssaR in NC_016831


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

190) SEEH1578_16330 in NC_021810


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

191) SU5_02035 in NC_017623


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

192) ssaR in NC_021812


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

193) epaP in NC_011083


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

194) CFSAN001992_04495 in NC_020307


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

195) epaP in NC_011080


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

196) SN31241_24890 in NC_021902


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

197) SSPA1332 in NC_011147


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

198) yscR in NC_006511


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

199) SPAB_01906 in NC_010102


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

200) yscR in NC_012125


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

201) ssaR in NC_021984


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

202) epaP in NC_011094


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

203) ssaR in NC_016856


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

204) yscR in NC_017046


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

205) STMMW_14241 in NC_016854


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

206) ssaR in NC_003197


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

207) yscR in NC_016810


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

208) ssaR in NC_016857


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

209) STMDT12_C14350 in NC_016860


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

210) STU288_03415 in NC_021151


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

211) ssaR in NC_016863


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

212) ssaR in NC_021814


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 127/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G+AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

213) escR in NC_013353


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 128/185 (70%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFFQKVD---EKILSPYRGFLEKNTEKENVEFFERAAQKKLGNE--TILKKDSLFILLP  146
            +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

214) ECs4583 in NC_002695


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  141 bits (518),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 129/187 (69%), Gaps = 9/187 (4%)

Query  30   IGTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINY  89
            + TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNY  92

Query  90   TDSDFFQKVD---EKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNE--TILKKDSLFIL  144
              +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL
Sbjct  93   GAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLIL  152

Query  145  LPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVG  204
             PAFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++
Sbjct  153  APAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMD  212

Query  205  GWQKLFE  211
            GW  L++
Sbjct  213  GWSMLIH  219

215) escR in NC_013361


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 128/185 (70%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFFQKVD---EKILSPYRGFLEKNTEKENVEFFERAAQKKLGNE--TILKKDSLFILLP  146
            +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

216) yscR in NC_003198


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  141 bits (518),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 126/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

217) STBHUCCB_13770 in NC_016832


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  141 bits (518),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 126/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

218) TY21A_06540 in NC_021176


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  141 bits (518),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 126/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

219) yscR in NC_004631


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  141 bits (518),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 79/187 (43%), Positives = 126/187 (68%), Gaps = 0/187 (0%)

Query  28   TSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKERWHPVQVAGAP  87
            TS+ K+ VV+++LRNA+G+QQVPPN+ L G AL++S F+M+P  +      +    ++  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDN  98

Query  88   FWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTV  147
             +          P+RQFL K++ E+E  +F    ++ WP D    +K+D LLIL PAFT+
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  148  SQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTL  207
            S+LT+AFRIG+L+YL F+ IDL+++N L+AMG+  V+P  +++PFKLL+F+  +GW + +
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  208  AQLVQSF  214
              LV S+
Sbjct  219  HGLVLSY  225

220) escR in NC_013364


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 128/185 (70%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFFQKVD---EKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNE--TILKKDSLFILLP  146
            +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

221) escR in NC_011601


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 128/185 (70%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFFQKVD---EKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNE--TILKKDSLFILLP  146
            +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

222) epaP in NC_011353


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 128/185 (70%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFFQKVD---EKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNE--TILKKDSLFILLP  146
            +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

223) escR in NC_002655


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 128/185 (70%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFFQKVD---EKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNE--TILKKDSLFILLP  146
            +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

224) escR in NC_013008


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 128/185 (70%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFFQKVD---EKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNE--TILKKDSLFILLP  146
            +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

225) escR in NC_013941


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 128/185 (70%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFFQKVD---EKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNE--TILKKDSLFILLP  146
            +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

226) ECO55CA74_21290 in NC_017656


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 128/185 (70%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFFQKVD---EKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNE--TILKKDSLFILLP  146
            +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

227) CDCO157_4318 in NC_017906


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 128/185 (70%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFFQKVD---EKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNE--TILKKDSLFILLP  146
            +    ++    +    P+R FL K+T   +  FF R+AQ+   ++  T LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

228) ssaR in NC_012751


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 86/194 (45%), Positives = 137/194 (71%), Gaps = 11/194 (5%)

Query  28   TCFLKLSVVFSLLRNALGVQQTPPNIAIYGLALVLTIFIMAPVGLEVNESLKGEKLSQDF  87
            T + K+ VV++LLRNA+GVQQ PPN+ + G+AL+++ F+MAPVG+E   ++K+   +Q++
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGME---AFKA---AQNY  92

Query  88   GTFVEQINSKAL-----DPYRQFLLHNTSSEQINFFSDMIKNNWPKKYRDKVASDSLLIL  142
            G+  ++     L     +P+RQFLL +T+  +  FF    ++ WPK     + SD LLIL
Sbjct  93   GAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLIL  152

Query  143  MPAFTVSQLIEAFKIGLLLYLPFVAIDLIVSNILLAmgmmmmspmTISLPFKILIFLLVG  202
             PAFT+S+L EAF+IG+LLYL F+ IDL+V+N L+AMG+  ++P  +++PFK+L+F+ ++
Sbjct  153  APAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMD  212

Query  203  GWDMILGQLAGSYR  216
            GW M++  L  SYR
Sbjct  213  GWSMLIHGLVLSYR  226

229) H045_00190 in NC_020209


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 86/202 (43%), Positives = 141/202 (70%), Gaps = 7/202 (3%)

Query  18   MSLLPMLLVVCTAFLKIVIVLMITRNAIGVQQVPPSMAINGIALAATLFVMAPVG---YQ  74
            ++LLP   +V T++ KIV+VL + RNAIGVQQVPP+M +NG+AL  + FVMAPVG   ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  75   IAENLKTSPLDMSNVQTLQATGLVAIQPLRTFMTRNTDPDVLTHLQENSARMWPPEMAQS  134
             A+N  +++ +   V  L+A      +P+R F+ ++T     + +  ++ ++WP + A +
Sbjct  88   AAQNYGAGSDNSRIVVLLDA----CREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATT  143

Query  135  TQREDWVLLIPAFVVSQLQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194
             + +D ++L PAF +S+L  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  195  KLLLFVMVSGWSRLLDSLFLSY  216
            KLLLFV + GWS L+++L LSY
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSY  225

230) fliP in NC_014228


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 86/206 (42%), Positives = 137/206 (67%), Gaps = 9/206 (4%)

Query  72   LIFITALGFIPAALLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFMTFFIMAPV  131
            L+ +  LG++P A +++TS+T+I++VLGLLRNA+G    PPN V+ G+AL+++ F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  132  FDKVYQDAYLPYNE--DKITLEAALDKGSKPLRQFMLRQTRENDLALFARLADQEAFETA  189
                ++ A   Y    D+  +   LD    P+RQF+L++T E + A+F R + Q+     
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMR-SAQQIWPKD  139

Query  190  DSVPLR-----VLVPAFITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPATI  244
             +  L+     +L PAF  SEL  AF+IGF L++ F++IDLVVA+ LMA+G+  V P+ +
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  245  SLPFKLMLFVLVDGWQLLLGSLAQSF  270
            ++PFKL+LFV +DGW +L+ +L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

231) CPK_ORF00233 in NC_017285


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (502),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 155/222 (70%), Gaps = 12/222 (5%)

Query  86   PDITTQAIILIFLALSPFLVMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSI  145
            PD+ +  +++I L+L PF  M++TSY KI++ L LLRNA+GVQQ PP+ VLNG+AL++S 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  146  YVMFPTGVAMYKDARKEIEANTIPQSLFTAEGAET-VFVALNKSKEPLRSFLIRNTPKAQ  204
            +VM P G+  +K A++           + A + ++ + V L+  +EP+R FL+++TP  +
Sbjct  76   FVMAPVGMEAFKAAQN-----------YGAGSDNSRIVVLLDACREPFRQFLLKHTPERE  124

Query  205  IQSFYKISQKTFPSEIREHLTASDFVIIIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTAN  264
               F + +Q+  P +    L + D++I+ PAF ++++ +AF IG L+YL F+VIDLV AN
Sbjct  125  KAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVAN  184

Query  265  VLVAMQmmmlsplsislplkllliVMVDGWTLLLQGLMISFK  306
             L+AM +  ++P ++++P+KLLL+V +DGW++L++GL++S++
Sbjct  185  ALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

232) fliP in NC_012559


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 83/191 (44%), Positives = 136/191 (72%), Gaps = 7/191 (3%)

Query  64   LMMTAFTRIVIVLSLLRQAIGLMQSPPNQVIVGLSLFLTLFVMAPVFDQAYREAWLPYSD  123
            +++T++T+IV+VL+LLR+AIG+ Q PPN V+ G++L+++ FVMAPV  +A++ A   Y+ 
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  124  SQMNFMQAA--EKGVQPFKGFMLKQTREKDLAFFVEIARE----APPATPADVSLKTLIP  177
            +  N       +   +PF+ F+LK+T E++ AFF+  A++      ++T     L  L P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  178  AFVVSELKTAFQIGFMVFIPFLIIDLVVASVLMAMGMMMVSPVIISLPFKLMLFVLVDGW  237
            AF +SEL  AF+IGF++++ F++IDLVVA+ LMAMG+  V+P  +++PFKL+LFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  238  TLLIGSLVQSF  248
            ++LI +LV S+
Sbjct  215  SMLIHGLVLSY  225

233) escR in NC_013716


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 76/185 (42%), Positives = 127/185 (69%), Gaps = 9/185 (4%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTIFIMSPIILQINDNISQEPINYTD  91
            TS+ KI +VLG+L+NA+G+QQVPPNM L +V+L+++ F+M+P+ ++      + + NY  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEA----FKAAQNYGA  94

Query  92   SDFYQKVD---GKIISPYRIFLENNTNKENIDFFENVAKKKLGNE--TSLKKDSLFILLP  146
            +    ++    +    P+R FL ++T   +  FF   A++   ++  T+LK D L+IL P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  147  AFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILIGGW  206
            AFT+++L  AF+IGFLLYL FI IDL+++N L+A+G+  V+P  ++IPFK+LLF+ ++GW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  207  QKLFE  211
              L++
Sbjct  215  SMLIH  219

234) Calkro_0478 in NC_014720


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (504),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 77/192 (41%), Positives = 136/192 (71%), Gaps = 7/192 (3%)

Query  67   IMMTSFTRILIVLGFIRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYTQAYQPYIN  126
            +++TS+T+I++VLG++RNA+G QQ+PPN +L G+AL+++ FVMAPV    +  A Q Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  127  GRITSQEA--LKRAEEPLKEFMLKNTRKKDLDLFVKLSNV----NPNTNVKDLPLRVVVP  180
            G   S+    L    EP+++F+LK+T  ++  +F++ ++     +  T +K   L ++ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  181  AFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILLFILVDGW  240
            AF +SEL  AF +GFL+Y+ F++ID+VVA+ LM+MG+  + P  +++PFK+LLF+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  241  NLVVESLVRSFK  252
            ++++++LV S++
Sbjct  215  SMLIHGLVLSYR  226

235) CP1046 in NC_002179


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (504),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 156/222 (71%), Gaps = 12/222 (5%)

Query  86   PDITTQAIILIFLALSPFLVMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSI  145
            PD+ +  +++I L+L PF  M++TSY KI++ L LLRNA+GVQQ PP+ VLNG+AL++S 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  146  YVMFPTGVAMYKDARKEIEANTIPQSLFTAEGAET-VFVALNKSKEPLRSFLIRNTPKAQ  204
            +VM P G+  +K A++           + A + ++ + V L+  +EP+R FL+++TP  +
Sbjct  76   FVMAPVGMEAFKAAQN-----------YGAGSDNSRIVVLLDACREPFRQFLLKHTPERE  124

Query  205  IQSFYKISQKTFPSEIRAHLTASDFVIIIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTAN  264
               F + +Q+  P +  + L + D++I+ PAF ++++ +AF IG L+YL F+VIDLV AN
Sbjct  125  KAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVAN  184

Query  265  VLVAMQmmmlsplsislplkllliVMVDGWTLLLQGLMISFK  306
             L+AM +  ++P ++++P+KLLL+V +DGW++L++GL++S++
Sbjct  185  ALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

236) yscR in NC_000922


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (504),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 156/222 (71%), Gaps = 12/222 (5%)

Query  86   PDITTQAIILIFLALSPFLVMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSI  145
            PD+ +  +++I L+L PF  M++TSY KI++ L LLRNA+GVQQ PP+ VLNG+AL++S 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  146  YVMFPTGVAMYKDARKEIEANTIPQSLFTAEGAET-VFVALNKSKEPLRSFLIRNTPKAQ  204
            +VM P G+  +K A++           + A + ++ + V L+  +EP+R FL+++TP  +
Sbjct  76   FVMAPVGMEAFKAAQN-----------YGAGSDNSRIVVLLDACREPFRQFLLKHTPERE  124

Query  205  IQSFYKISQKTFPSEIRAHLTASDFVIIIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTAN  264
               F + +Q+  P +  + L + D++I+ PAF ++++ +AF IG L+YL F+VIDLV AN
Sbjct  125  KAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVAN  184

Query  265  VLVAMQmmmlsplsislplkllliVMVDGWTLLLQGLMISFK  306
             L+AM +  ++P ++++P+KLLL+V +DGW++L++GL++S++
Sbjct  185  ALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

237) yscR in NC_002491


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (504),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 156/222 (71%), Gaps = 12/222 (5%)

Query  86   PDITTQAIILIFLALSPFLVMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSI  145
            PD+ +  +++I L+L PF  M++TSY KI++ L LLRNA+GVQQ PP+ VLNG+AL++S 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  146  YVMFPTGVAMYKDARKEIEANTIPQSLFTAEGAET-VFVALNKSKEPLRSFLIRNTPKAQ  204
            +VM P G+  +K A++           + A + ++ + V L+  +EP+R FL+++TP  +
Sbjct  76   FVMAPVGMEAFKAAQN-----------YGAGSDNSRIVVLLDACREPFRQFLLKHTPERE  124

Query  205  IQSFYKISQKTFPSEIRAHLTASDFVIIIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTAN  264
               F + +Q+  P +  + L + D++I+ PAF ++++ +AF IG L+YL F+VIDLV AN
Sbjct  125  KAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVAN  184

Query  265  VLVAMQmmmlsplsislplkllliVMVDGWTLLLQGLMISFK  306
             L+AM +  ++P ++++P+KLLL+V +DGW++L++GL++S++
Sbjct  185  ALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

238) yscR in NC_005043


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (504),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 156/222 (71%), Gaps = 12/222 (5%)

Query  86   PDITTQAIILIFLALSPFLVMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSI  145
            PD+ +  +++I L+L PF  M++TSY KI++ L LLRNA+GVQQ PP+ VLNG+AL++S 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  146  YVMFPTGVAMYKDARKEIEANTIPQSLFTAEGAET-VFVALNKSKEPLRSFLIRNTPKAQ  204
            +VM P G+  +K A++           + A + ++ + V L+  +EP+R FL+++TP  +
Sbjct  76   FVMAPVGMEAFKAAQN-----------YGAGSDNSRIVVLLDACREPFRQFLLKHTPERE  124

Query  205  IQSFYKISQKTFPSEIRAHLTASDFVIIIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTAN  264
               F + +Q+  P +  + L + D++I+ PAF ++++ +AF IG L+YL F+VIDLV AN
Sbjct  125  KAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVAN  184

Query  265  VLVAMQmmmlsplsislplkllliVMVDGWTLLLQGLMISFK  306
             L+AM +  ++P ++++P+KLLL+V +DGW++L++GL++S++
Sbjct  185  ALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

239) Calhy_0599 in NC_014652


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (502),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 77/192 (41%), Positives = 136/192 (71%), Gaps = 7/192 (3%)

Query  68   IMMTSFTRILIVLGFVRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYTQAYQPYIN  127
            +++TS+T+I++VLG++RNA+G QQ+PPN +L G+AL+++ FVMAPV    +  A Q Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  128  GRITSQEA--LKRAEEPLKEFMLKNTRKKDLDLFVKLSNV----NPNTNVKDLPLRVVVP  181
            G   S+    L    EP+++F+LK+T  ++  +F++ ++     +  T +K   L ++ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  182  AFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILLFILVDGW  241
            AF +SEL  AF +GFL+Y+ F++ID+VVA+ LM+MG+  + P  +++PFK+LLF+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  242  NLVVESLVRSFK  253
            ++++++LV S++
Sbjct  215  SMLIHGLVLSYR  226

240) Calla_1939 in NC_015949


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (502),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 77/192 (41%), Positives = 136/192 (71%), Gaps = 7/192 (3%)

Query  68   IMMTSFTRILIVLGFVRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYTQAYQPYIN  127
            +++TS+T+I++VLG++RNA+G QQ+PPN +L G+AL+++ FVMAPV    +  A Q Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  128  GRITSQEA--LKRAEEPLKEFMLKNTRKKDLDLFVKLSNV----NPNTNVKDLPLRVVVP  181
            G   S+    L    EP+++F+LK+T  ++  +F++ ++     +  T +K   L ++ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  182  AFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILLFILVDGW  241
            AF +SEL  AF +GFL+Y+ F++ID+VVA+ LM+MG+  + P  +++PFK+LLF+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  242  NLVVESLVRSFK  253
            ++++++LV S++
Sbjct  215  SMLIHGLVLSYR  226

241) Calkr_0422 in NC_014721


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  137 bits (502),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 77/192 (41%), Positives = 136/192 (71%), Gaps = 7/192 (3%)

Query  68   IMMTSFTRILIVLGFVRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYTQAYQPYIN  127
            +++TS+T+I++VLG++RNA+G QQ+PPN +L G+AL+++ FVMAPV    +  A Q Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  128  GRITSQEA--LKRAEEPLKEFMLKNTRKKDLDLFVKLSNV----NPNTNVKDLPLRVVVP  181
            G   S+    L    EP+++F+LK+T  ++  +F++ ++     +  T +K   L ++ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  182  AFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILLFILVDGW  241
            AF +SEL  AF +GFL+Y+ F++ID+VVA+ LM+MG+  + P  +++PFK+LLF+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  242  NLVVESLVRSFK  253
            ++++++LV S++
Sbjct  215  SMLIHGLVLSYR  226

242) Athe_2157 in NC_012034


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 78/192 (41%), Positives = 136/192 (71%), Gaps = 7/192 (3%)

Query  67   IMMTSFTRILIVLGFIRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYIQAYQPYIN  126
            +++TS+T+I++VLG++RNA+G QQ+PPN +L G+AL+++ FVMAPV    +  A Q Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  127  GRITSQEA--LKRAEEPLKEFMLKNTRKKDLDLFVKLSNV----NPNTNVKDLPLRVVVP  180
            G   S+    L    EP+++F+LK+T  ++  +F++ ++     +  T +K   L ++ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  181  AFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILLFILVDGW  240
            AF +SEL  AF +GFL+Y+ F++ID+VVA+ LM+MG+  + P  +++PFK+LLF+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  241  NLVIESLVRSFK  252
            +++I++LV S++
Sbjct  215  SMLIHGLVLSYR  226

243) fliP in NC_015856


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 83/188 (45%), Positives = 130/188 (70%), Gaps = 7/188 (3%)

Query  70   TSFTRIIIVLGLLRTAIGAQSSPPNQILVGLALFLTFFVMSPVFDKAY--SDAYKPFSDN  127
            TS+T+I++VLGLLR AIG Q  PPN +L G+AL+++ FVM+PV   A+  ++ Y + + +
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA-GSD  97

Query  128  KISAEQALERGIQPFKQFMLKQTREGDLALFARLAQA--PQMQGP--EEVPLRILVPAFV  183
            +      L+   +PF+QF+LK+T E + A+F R AQ   P+ ++       L IL PAF 
Sbjct  98   NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  184  ISELKTAFQIGFTIFIPFLIVDLVVASVLMSMGMMMVPPATISLPFKLMLFVLVDGWQLL  243
            +SEL  AF+IGF +++ F+++DLVVA+ LM+MG+  V P+ +++PFKL+LFV +DGW +L
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  244  IGALAQSF  251
            I +L  S+
Sbjct  218  IHGLVLSY  225

244) fliP in NC_016002


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 143/207 (70%), Gaps = 9/207 (4%)

Query  46   MLLFMTALSFIPALLLMMTSFTRIIIVLSLLRQAMGTMQAPPNQVLVGLALFLTLFVMGP  105
            +LL +  L+++P   +++TS+T+I++VL+LLR+A+G  Q PPN VL G+AL+++ FVM+P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  106  TFDQVYSKAWVPFSE--DKIGFAQMLEEGSKPMREFMLKQTREKDLAFFIEVSQSPAPPT  163
               + +  A   ++   D+  +  +L+    P R+F+LK+T E++ AFF+  +Q    P 
Sbjct  81   VGMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQ-QIWPK  138

Query  164  PAEVSMKT-----LIPAFVISELKTAFQIGFMVFIPFLIIDLVVASILMAMGMMMVSPVI  218
                ++K+     L PAF +SEL  AF+IGF++++ F++IDLVVA+ LMAMG+  V+P  
Sbjct  139  DKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTN  198

Query  219  ISLPFKLMLFVLVDGWTLLMGSLVRSF  245
            +++PFKL+LFV +DGW++L+ +LV S+
Sbjct  199  VAIPFKLLLFVAMDGWSMLIHGLVLSY  225

245) fliP in NC_012962


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  135 bits (495),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 83/206 (41%), Positives = 138/206 (67%), Gaps = 9/206 (4%)

Query  51   LVFITALGFIPAALLMMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFMTFFIMSPV  110
            L+ +  LG++P A +++TS+T+I++VLGLLRNA+G    PPN VL G+AL+++ F+M+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  111  FDKVYQ--DAYLPFSEDKISLETALENGAKPLRQFMLRQTRENDLALFARLADQPPFETA  168
                ++  + Y + + D+  +   L+    P+RQF+L++T E + A+F R + Q      
Sbjct  82   GMEAFKAAQNYGA-GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMR-SAQQIWPKD  139

Query  169  DSVPMR-----VLMPAFITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPATI  223
             +  ++     +L PAF  SEL  AF+IGF L++ F++IDLVVA+ LMA+G+  V P+ +
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  224  SLPFKLMLFVLVDGWQLLLGSLAQSF  249
            ++PFKL+LFV +DGW +L+ +L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

246) sctR in NC_015713


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  133 bits (489),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 96/226 (43%), Positives = 163/226 (73%), Gaps = 11/226 (4%)

Query  64   SRFGAPNVVTMLAVitllallpfaillltSYTKIVIVLSLVRNALGVQQAPPNQVLNGIA  123
            +R   P+V ++L V+ +L+LLPFA +++TSYTKIV+VL+L+RNA+GVQQ PPN VLNG+A
Sbjct  11   ARMQMPDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVA  70

Query  124  LLMTIYVMFPTGVAMYNAGKNYIQNEAPANLFTADTASYLVNVIDKSKDPLRDFLIRNMS  183
            LL++ +VM P G+  ++A++NY      + +         V ++D  ++P+R+FL+++ +
Sbjct  71   LLVSCFVMAPVGMEAFKAAQNYGAGSDNSRI---------VVLLDACREPFRQFLLKH-T  120

Query  184  TAHQKNFYQLAYRSL-PADYRNELSPNDFIVLIPAYITSQIKGAFEIGVLIYLPFFVIDL  242
              ++K F+  + + + P D    L ++D+++L PA+  S++  AF IG L+YL F+VIDL
Sbjct  121  PEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDL  180

Query  243  VTSNILLAMGMMMlspltialplkllliVMVDGWTLIIQGLVLTYK  288
            V +N L+AMG+  ++P  +A+P+KLLL+V +DGW+++I+GLVL+Y+
Sbjct  181  VVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

247) hrcR in NC_013971


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  133 bits (487),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 84/202 (42%), Positives = 135/202 (67%), Gaps = 7/202 (3%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            L+L+P   +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + FVMAPV     +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV---GME  84

Query  78   QFSQVPADLSSMDNLKTSV--TNGVAPLQKFM-THNTDPDILIHLQENSVRMWPKEMSDS  134
             F       ++ DN +  V       P+++F+  H  + +  + ++    ++WPK+ + +
Sbjct  85   AFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQ-QIWPKDKATT  143

Query  135  VNKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPL  194
            ++ D+LL++ PAF LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  195  KMLLFVLINGWTRLLDGLFYSY  216
            K+LLFV ++GW+ L++GL  SY
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSY  225

248) hcrR in NC_013961


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  133 bits (487),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 84/202 (42%), Positives = 135/202 (67%), Gaps = 7/202 (3%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            L+L+P   +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + FVMAPV     +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV---GME  84

Query  78   QFSQVPADLSSMDNLKTSV--TNGVAPLQKFM-THNTDPDILIHLQENSVRMWPKEMSDS  134
             F       ++ DN +  V       P+++F+  H  + +  + ++    ++WPK+ + +
Sbjct  85   AFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQ-QIWPKDKATT  143

Query  135  VNKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPL  194
            ++ D+LL++ PAF LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  195  KMLLFVLINGWTRLLDGLFYSY  216
            K+LLFV ++GW+ L++GL  SY
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSY  225

249) fliP in NC_007348


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  133 bits (489),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 140/208 (68%), Gaps = 13/208 (6%)

Query  65   LVLLTSLSFLPAAVLMMTGFTRIVIVLGLLRNALGTASSPPNQVLVGLSLFLTFFVMSPV  124
            L+++  L++LP A +++T++T+IV+VLGLLRNA+G    PPN VL G++L+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  125  LDRVYN--DAYKPLSENRISLETAMAKAAEPLKGFMLKQTREKDLAMFAQ-------MAK  175
                ++  + Y + S+N   +   +    EP++ F+LK+T E++ A F +         K
Sbjct  82   GMEAFKAAQNYGAGSDNS-RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  176  APEMQGPEEVPMSILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPA  235
            A  +++ +   + IL PAF  SEL  AF+IGF +++ F++IDLVVA+ LMAMG+  V P+
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  236  TISLPFKLMLFVLVDGWQLLLGSLAQSF  263
             +++PFKL+LFV +DGW +L+ +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

250) hrcR in NC_010694


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  133 bits (487),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 83/204 (41%), Positives = 137/204 (68%), Gaps = 11/204 (5%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPV----FN  73
            L+L+P   +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + FVMAPV    F+
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  74   QMQQQFSQSPADLSSMDSLKNSVTHGVAPLQKFM-THNTDPDILIHLQENSVRMWPKEMS  132
               Q+++ ++ +   +  L         P+++F+  H  + +  + ++    ++WPK+ +
Sbjct  88   A-AQNYGAGSDNSRIVVLLDACR----EPFRQFLLKHTPEREKAFFMRSAQ-QIWPKDKA  141

Query  133  DSVSKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSL  192
             ++  D+LL++ PAF LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++
Sbjct  142  TTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAI  201

Query  193  PLKMLLFVLINGWTRLLDGLFYSY  216
            P+K+LLFV ++GW+ L++GL  SY
Sbjct  202  PFKLLLFVAMDGWSMLIHGLVLSY  225

251) hrcR in NC_017445


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 84/202 (42%), Positives = 134/202 (67%), Gaps = 7/202 (3%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            L+L+P   +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + FVMAPV     +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV---GME  84

Query  78   QFSQVPADLSSMDNLKTSV--SNGVAPLQKFM-THNTDPDILIHLQENSVRMWPKEMSDS  134
             F       ++ DN +  V       P+++F+  H  + +  + ++    ++WPK+ + +
Sbjct  85   AFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQ-QIWPKDKATT  143

Query  135  VSKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPL  194
            +  D+LL++ PAF LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  195  KMLLFVLINGWTRLLDGLFYSY  216
            K+LLFV ++GW+ L++GL  SY
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSY  225

252) hcrR in NC_017390


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 84/202 (42%), Positives = 134/202 (67%), Gaps = 7/202 (3%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            L+L+P   +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + FVMAPV     +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV---GME  84

Query  78   QFSQVPADLSSMDNLKTSV--SNGVAPLQKFM-THNTDPDILIHLQENSVRMWPKEMSDS  134
             F       ++ DN +  V       P+++F+  H  + +  + ++    ++WPK+ + +
Sbjct  85   AFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQ-QIWPKDKATT  143

Query  135  VSKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPL  194
            +  D+LL++ PAF LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  195  KMLLFVLINGWTRLLDGLFYSY  216
            K+LLFV ++GW+ L++GL  SY
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSY  225

253) hrcR in NC_012214


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 84/202 (42%), Positives = 134/202 (67%), Gaps = 7/202 (3%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            L+L+P   +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + FVMAPV     +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV---GME  84

Query  78   QFSQVPADLSSMDNLKTSV--SNGVAPLQKFM-THNTDPDILIHLQENSVRMWPKEMSDS  134
             F       ++ DN +  V       P+++F+  H  + +  + ++    ++WPK+ + +
Sbjct  85   AFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQ-QIWPKDKATT  143

Query  135  VSKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPL  194
            +  D+LL++ PAF LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  195  KMLLFVLINGWTRLLDGLFYSY  216
            K+LLFV ++GW+ L++GL  SY
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSY  225

254) fliP in NC_007503


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 82/189 (44%), Positives = 127/189 (68%), Gaps = 7/189 (3%)

Query  71   MTSFTRIVVVLSLLRNAMGTQQAPPNQVLIGLALFLTIFIMSPVINKINQDAIQPYLNNQ  130
            +TS+T+IVVVL+LLRNA+G QQ PPN VL G+AL+++ F+M+PV       A Q Y    
Sbjct  38   VTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV-GMEAFKAAQNYGAGS  96

Query  131  ITQEQAI--RAAEAPLKDFMLKQTREKDLALFIELAKLPRPQTKDDV----PFTVVVPAF  184
                  +   A   P+++F+LK+T E++ A+F+  A+  +P+ K        + ++ PAF
Sbjct  97   DNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAF  156

Query  185  IISELKTAFQMGFMLFLPFLIIDMVVASILMSMGMFMIPPMLVALPFKLLLFVLADGWYL  244
             +SEL  AF++GF+L+L F++ID+VVA+ LM+MG+  + P  VA+PFKLLLFV  DGW +
Sbjct  157  TLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSM  216

Query  245  VVKSLVSSF  253
            ++ +LV S+
Sbjct  217  LIHGLVLSY  225

255) fliP in NC_007899


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  132 bits (485),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 152/221 (69%), Gaps = 10/221 (4%)

Query  85   PDLTTQAIILIFLALSPFLVMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSI  144
            PD+ +  +++I L+L PF  M++TSY KI++ L LLRNA+GVQQ PP+ VLNG+AL++S 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  145  YVMFPTGVAMYNDARKEIQGNAIPRDLFSAEGAETVFVALNKSKEPLRSFLIRNTPKSQI  204
            +VM P G+  ++ A++   G+  +R          + V L+  +EP+R FL+++TP  + 
Sbjct  76   FVMAPVGMEAFKAAQNYGAGSDNSR----------IVVLLDACREPFRQFLLKHTPEREK  125

Query  205  QSFYKISQKTFPPEIREHLTVSDFVIIVPAFIMGQIKNAFEIGVLIYLPFFVIDLVTANV  264
              F + +Q+  P +    L   D++I+ PAF ++++ +AF IG L+YL F+VIDLV AN 
Sbjct  126  AFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANA  185

Query  265  LVAMQmmmlsplsislplklllvvmvDGWTLLLQGLMISFK  305
            L+AM +  ++P ++++P+KLLL V +DGW++L++GL++S++
Sbjct  186  LMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

256) H650_09085 in NC_021500


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  131 bits (480),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 84/204 (42%), Positives = 136/204 (67%), Gaps = 5/204 (2%)

Query  53   LVLMTSLTFLPAILLMMTGFTRIVIVLGLLRNALGTASTPPNQVLLGLALFLTFFVMSPV  112
            L+++  L +LP   +++T++T+IV+VLGLLRNA+G    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  113  LNRVYDEAWV-PLSQDKISMEVALQKGSQPLRAFMLKQTREGDLALFSRIAKA----EQF  167
                +  A     + D+  + V L+   +P+R F+LK+T E + A+F R A+     ++ 
Sbjct  82   GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKA  141

Query  168  NTADDVPMSILVPAFVTSELKTGFQIGFTMFIPFLIIDLVVASVLMALGMMMVPPATISL  227
             T     + IL PAF  SEL  +F+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++
Sbjct  142  TTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAI  201

Query  228  PFKLMLFVLVDGWQLVIGSLAQSF  251
            PFKL+LFV +DGW ++I +L  S+
Sbjct  202  PFKLLLFVAMDGWSMLIHGLVLSY  225

257) Desku_1772 in NC_015573


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/193 (44%), Positives = 136/193 (71%), Gaps = 11/193 (5%)

Query  81   MVTSFTRIVVVLSILRGALGIQQTPPNQVIIGLALFLTFFVMTPTFQEINREALQPYLNN  140
            +VTS+T+IVVVL++LR A+G+QQ PPN V+ G+AL+++ FVM+P   E  + A Q Y   
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAG  95

Query  141  QLTQEQA--FEAAAKPLKAFMLKQTREKDLALFVSLAKMPRPRN------ADDLPITVVI  192
                     ++A   P++ F+LK+T E++ A+F+  A+  +P++      +DDL   ++ 
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL--LILA  153

Query  193  PAFVISELKTAFQMGFLLYVPFLVIDMVVASALMSMGMFMLPPVMISLPFKLLLFVMVDG  252
            PAF +SEL  AF++GFLLY+ F+VID+VVA+ALM+MG+  + P  +++PFKLLLFV +DG
Sbjct  154  PAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDG  213

Query  253  WYLVVRSLVESFH  265
            W +++++LV S++
Sbjct  214  WSMLIHGLVLSYR  226

258) Vapar_4178 in NC_012791


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 83/195 (43%), Positives = 130/195 (67%), Gaps = 19/195 (9%)

Query  69   MTSFTRILIVLGLLRTAIGTQSSPPNQILVGLSLFLTFFVMAPVFDKVHDEAYKPFSENK  128
            +TS+T+I++VLGLLR AIG Q  PPN +L G++L+++ FVMAPV      EA+K+  +  
Sbjct  38   VTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV----GMEAFKAAQNYG  93

Query  129  ITAEKA-----LEKGIAPFKSFMLKQTRENDLALFARLA-------KIPDMQGPEEVPLR  176
              ++++     L+    PF+ F+LK+T E + A+F R A       K   +++ +   L 
Sbjct  94   AGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDD---LL  150

Query  177  ILLPSFVISELKTAFQIGFTIFIPFLIIDLVVASVLMSMGMMMVPPASIALPFKLMLFVM  236
            IL P+F +SEL  AF+IGF +++ F++IDLVVA+ LM+MG+  V P+++A+PFKL+LFV 
Sbjct  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210

Query  237  ADGWQLLIGALAQSF  251
             DGW +LI +L  S+
Sbjct  211  MDGWSMLIHGLVLSY  225

259) fliP in NC_009706


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 124/189 (66%), Gaps = 9/189 (4%)

Query  77   SFVRIVVVFGFLRTAMGTQQSPPNQVLVGLALFLTVFIMLPVYGKINSEAIQPYLQNGIT  136
            S+ +IVVV+G+LR A+G QQ PPN VL G+AL+++ F+M PV G     A Q Y   G  
Sbjct  40   SYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV-GMEAFKAAQNY-GAGSD  97

Query  137  QEQAV---ERGAKPLREFMLKQTRQKDLKLFVDEAKLNYEVTKDNA----PLYVVIPAYI  189
            + + V   +    P+R+F+LK+T +++  +F+  A+      K  +     L ++ PA+ 
Sbjct  98   NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  190  ISELKTAFQIGFLLYIPFMIIDLVVGSVLMSMGMFMLPPVMISLPFKLLLFVMTDGWYLL  249
            +SEL  AF+IGFLLY+ F++IDLVV++ LM+MG+  + P  +++PFKLLLFV  DGW +L
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  250  VKSLIISFS  258
            + +L++S+ 
Sbjct  218  IHGLVLSYR  226

260) fliP in NC_011837


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 124/189 (66%), Gaps = 9/189 (4%)

Query  77   SFVRIVVVFGFLRTAMGTQQSPPNQVLVGLALFLTVFIMLPVYGKINSEAIQPYLQNGIT  136
            S+ +IVVV+G+LR A+G QQ PPN VL G+AL+++ F+M PV G     A Q Y   G  
Sbjct  40   SYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV-GMEAFKAAQNY-GAGSD  97

Query  137  QEQAV---ERGAKPLREFMLKQTRQKDLKLFVDEAKLNYEVTKDNA----PLYVVIPAYI  189
            + + V   +    P+R+F+LK+T +++  +F+  A+      K  +     L ++ PA+ 
Sbjct  98   NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  190  ISELKTAFQIGFLLYIPFMIIDLVVGSVLMSMGMFMLPPVMISLPFKLLLFVMTDGWYLL  249
            +SEL  AF+IGFLLY+ F++IDLVV++ LM+MG+  + P  +++PFKLLLFV  DGW +L
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  250  VKSLIISFS  258
            + +L++S+ 
Sbjct  218  IHGLVLSYR  226

261) fliP in NC_007974


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 142/209 (68%), Gaps = 15/209 (7%)

Query  64   LVLLTSLSFLPAAMLMMTGFTRIIIVLGLLRNALGTASSPPNQVLVGLSLFLTFFVMSPV  123
            L+++  L++LP A +++T++T+I++VLGLLRNA+G    PPN VL G++L+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  124  FDKVY--TDAYQPLSEN-KISLETAAQRAAVPLRAFMLRQTREKDLAMFAQ-------MA  173
                +  ++ Y + S+N +I +   A R   P+R F+L++T E++ A F +         
Sbjct  82   GMEAFKAAQNYGAGSDNSRIVVLLDACRE--PFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  174  KTPELQGPEDVPFTVLVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPP  233
            K+  L++ +   + +L PAF  SEL  AF+IGF +++ F++IDLVVA+ LMAMG+  V P
Sbjct  140  KATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTP  196

Query  234  ATISLPFKLMLFVLVDGWQLLLGSLAQSF  262
            + +++PFKL+LFV +DGW +L+ +L  S+
Sbjct  197  TNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

262) M301_1012 in NC_014207


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 132/191 (70%), Gaps = 7/191 (3%)

Query  73   LMMTGFTRIIIVLSLLRQALGTQSAPPNQVMVGLALFLTFFVMSPVIDKIY--VDAYQPL  130
            +++T++T+I++VL+LLR+A+G Q  PPN V+ G+AL+++ FVM+PV    +   + Y + 
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA-  94

Query  131  SENKITMQEAMDKGAAPLKAFMMKQTREGDLALFVNMAK----IEKIETPDQVPLLVLVP  186
            + ++  +   +D    P++ F++K+T E + A+F+  A+     +K  T     LL+L P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  187  AFMTSELKTAFQIGFAIFIPFLIIDMVVASVLMAMGMMMVSPSIVSLPFKLMLFVLVDGW  246
            AF  SEL  AF+IGF +++ F++ID+VVA+ LMAMG+  V+P+ V++PFKL+LFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  247  QLLLGSLVQSF  257
             +L+ +LV S+
Sbjct  215  SMLIHGLVLSY  225

263) fliP in NC_015259


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  130 bits (475),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 83/206 (41%), Positives = 138/206 (67%), Gaps = 7/206 (3%)

Query  43   LVALLTVLSLAPSILVMVTSFTRIVVVLSLLRSAIGLQTAPPNMVMVSLALFLTAFIMAP  102
            L+ ++ +L+L P   ++VTS+T+IVVVL+LLR+AIG+Q  PPNMV+ ++AL+++ F+MAP
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  103  TLQVAYEEGVQPLVEGTIEFDQA--FERASTPFHAFMLSQVREKDLALF----QELSGQE  156
                A+  + Q    G+ +      ++    PF+ F+L +  E++ A+F    Q++  ++
Sbjct  81   VGMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  157  APETQEDLSFQTLIPAFMISELRRAFEIGFLLYLPFLIIDLVVASVLMSMGMMMLPPVVI  216
             + T     +  L PAF +SEL  AF IGFLLYL F++IDLVVA+ LM+MG+  + P  +
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  217  SLPFKLIFFVLVDGWNLVAGSLVRSF  242
            ++PFKL++FV +DGW+++  +LV S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

264) S70_18345 in NC_017731


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  130 bits (478),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 79/179 (45%), Positives = 122/179 (69%), Gaps = 7/179 (3%)

Query  62   MMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFVMSPVADQAYR--EAYQPFS  119
            ++TS+T+I++VLGLLRNA+G    PPN VL G+AL+++ FVM+PV+ +A++  + Y + +
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA-G  95

Query  120  EDKISLETALERGTAPFRTFMLGQTRESDLALFARIAKV----GEIQEAKDVPMRILVPA  175
             D+  +   L+    PFR F+L +T E + A+F R A+     +     K   + IL PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  176  FITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATVSLPFKLMLFVLVDGW  234
            F  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ V++PFKL+LFV +DGW
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

265) Tmar_0992 in NC_014831


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  130 bits (477),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 79/191 (42%), Positives = 134/191 (71%), Gaps = 7/191 (3%)

Query  39   IMMTGFTRIVVALSFLRSALGTQQAPPNQVLVGLALFLTVFVMAPVWQQVYQDAWVPYRD  98
            +++T++T+IVV L++LR+A+G QQ PPN VL G+AL+++ FVMAPV  + ++ A   Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  99   GQIGQ--VEALQRAQQPVREFMFRYTRERDLALFLELS----GRGPVESRDQVPTYVLIP  152
            G      V  L+  ++P R+F+++ T ER+ A+F+  +     ++   +       +L P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  153  AFAISELKTAFQIGFILYVPFLVIDMVVASTLMSMGMLMVPPMLVSLPFKILLFVLVDGW  212
            AF++SEL  AF+IGF+LY+ F+VID+VVA++LM+MG+  V P  V++PFK+LLFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  213  NLVVRSLLASF  223
            ++++++L+ S+
Sbjct  215  SMLIHGLVLSY  225

266) NT01EI_2431 in NC_012779


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 136/199 (69%), Gaps = 7/199 (3%)

Query  52   LSFLPAALLLMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVLDKIYQ  111
            L++LP A +++TS+T+I++VLGLLRNA+G    PPN VL G+AL+++ F+M+PV    ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  112  --EAYQPFSEQKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQ--PEMQGP--ED  165
              + Y + + ++  +   LD    P+R F+L++T E + A+F R A+Q  P  ++     
Sbjct  88   AAQNYGA-GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  166  VPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLM  225
              + IL PA+  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  226  LFVLVDGWQLLLGSLAQSF  244
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

267) rscR in NC_017911


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  129 bits (474),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 91/219 (42%), Positives = 154/219 (71%), Gaps = 9/219 (4%)

Query  1    MILQGLDPVVLAVFLGALSLMPMLLVVCTAFLKIVIVLMITRNAIGVQQVPPSMAINGIA  60
            M + ++++++L V++  L+L+P   +V T++ KIV+VL + RNAIGVQQVPP+M +NG+A
Sbjct  13   MQMPDVGSLLLVVIM--LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVA  70

Query  61   LAATLFIMAPVG---YEIAENLKASPLDMTNVQTFLSTGNEAINPLRAFMLRNVDPDVLT  117
            L  + F+MAPVG   +  A+N  A++ D + +  +L +  E   P+R F+L++      +
Sbjct  71   LLVSCFVMAPVGMEAFKAAQNYGAGS-DNSRIVVLLDACRE---PFRQFLLKHTPEREKA  126

Query  118  HLLENTARLWPAKMAQEVQREDLILLIPAFVLSQLQAGFEIGFLIYIPFIVIDLIVSNLL  177
             ++ ++ ++WP   A  ++ +DL++L PAF LS+L  +F IGFL+Y+ FIVIDL+V+N L
Sbjct  127  FFMRSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANAL  186

Query  178  LALGMQMVSPMTISlplklllfvlVSGWSRLLDSLFLSY  216
            +A+G+  V+P  +++P+KLLLFV + GWS L+++L LSY
Sbjct  187  MAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

268) fliP in NC_012857


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  129 bits (474),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 136/200 (68%), Gaps = 9/200 (4%)

Query  55   LGFLPAIILMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTFFVMSPVLDKVY-  113
            LG+LP   ++++S+T+I++VL+LLR+A+G Q  PPN VL G+AL+++ FVM+PV    + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  114  -TDAYVPLRDNKITVEQAMDTAATPLRQFMLKQTREPDLALFVKMGNMPAIASPEQTPMR  172
             ++ Y +  DN   V   +D+   P+RQF+LK+T E + A+F++ ++    +    T ++
Sbjct  88   AAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRSAQ-QIWPKDKATTLK  145

Query  173  A-----LIPAFVTSELKSAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFSLPFKI  227
            +     L PAF  SEL  AF+IGF +++ F+VID+VVA  LM+MG+  VTP+  ++PFK+
Sbjct  146  SDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKL  205

Query  228  MLFVLVDGWHLLLGSLAQSF  247
            +LFV +DGW +L+ +L  S+
Sbjct  206  LLFVAMDGWSMLIHGLVLSY  225

269) fliP in NC_010678


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  129 bits (474),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 136/200 (68%), Gaps = 9/200 (4%)

Query  55   LGFLPAIILMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTFFVMSPVLDKVY-  113
            LG+LP   ++++S+T+I++VL+LLR+A+G Q  PPN VL G+AL+++ FVM+PV    + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  114  -TDAYVPLRDNKITVEQAMDTAATPLRQFMLKQTREPDLALFVKMGNMPAIASPEQTPMR  172
             ++ Y +  DN   V   +D+   P+RQF+LK+T E + A+F++ ++    +    T ++
Sbjct  88   AAQNYGAGSDNSRIVVL-LDACREPFRQFLLKHTPEREKAFFMRSAQ-QIWPKDKATTLK  145

Query  173  A-----LIPAFVTSELKSAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFSLPFKI  227
            +     L PAF  SEL  AF+IGF +++ F+VID+VVA  LM+MG+  VTP+  ++PFK+
Sbjct  146  SDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKL  205

Query  228  MLFVLVDGWHLLLGSLAQSF  247
            +LFV +DGW +L+ +L  S+
Sbjct  206  LLFVAMDGWSMLIHGLVLSY  225

270) ETAC_10205 in NC_020796


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 136/199 (69%), Gaps = 7/199 (3%)

Query  52   LSFLPAALLLMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVLDKIYQ  111
            L++LP A +++TS+T+I++VLGLLRNA+G    PPN VL G+AL+++ F+M+PV    ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  112  DAYQPFSE--QKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQ--PEMQGP--ED  165
             A Q ++   ++  +   LD    P+R F+L++T E + A+F R A+Q  P  ++     
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  166  VPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLM  225
              + IL PA+  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  226  LFVLVDGWQLLLGSLAQSF  244
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

271) fliP in NC_013508


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 136/199 (69%), Gaps = 7/199 (3%)

Query  52   LSFLPAALLLMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVLDKIYQ  111
            L++LP A +++TS+T+I++VLGLLRNA+G    PPN VL G+AL+++ F+M+PV    ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  112  DAYQPFSE--QKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQ--PEMQGP--ED  165
             A Q ++   ++  +   LD    P+R F+L++T E + A+F R A+Q  P  ++     
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  166  VPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLM  225
              + IL PA+  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  226  LFVLVDGWQLLLGSLAQSF  244
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

272) fliP in NC_017309


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 136/199 (69%), Gaps = 7/199 (3%)

Query  52   LSFLPAALLLMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVLDKIYQ  111
            L++LP A +++TS+T+I++VLGLLRNA+G    PPN VL G+AL+++ F+M+PV    ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  112  DAYQPFSE--QKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQ--PEMQGP--ED  165
             A Q ++   ++  +   LD    P+R F+L++T E + A+F R A+Q  P  ++     
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  166  VPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLM  225
              + IL PA+  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  226  LFVLVDGWQLLLGSLAQSF  244
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

273) fliP in NC_022247


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  129 bits (472),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 81/193 (42%), Positives = 128/193 (67%), Gaps = 19/193 (9%)

Query  71   SFTRILIVLGLLRTAIGTQSSPPNQILVGLSLFLTFFVMSPVFDKVHDEAYKPFSENKIT  130
            S+T+I++VLGLLR AIG Q  PPN +L G++L+++ FVM+PV      EA+K+  +    
Sbjct  40   SYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV----GMEAFKAAQNYGAG  95

Query  131  AEKA-----LEKGIAPFKSFMLKQTRENDLALFARLA-------KIPDMQGPEEVPLRIL  178
            ++++     L+    PF+ F+LK+T E + A+F R A       K   +++ +   L IL
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDD---LLIL  152

Query  179  LPSFVISELKTAFQIGFTIFIPFLIIDLVVASVLMSMGMMMVPPASIALPFKLMLFVMAD  238
             P+F +SEL  AF+IGF +++ F++IDLVVA+ LM+MG+  V P+++A+PFKL+LFV  D
Sbjct  153  APAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMD  212

Query  239  GWQLLIGALAQSF  251
            GW +LI +L  S+
Sbjct  213  GWSMLIHGLVLSY  225

274) Daud_1753 in NC_010424


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 83/206 (41%), Positives = 140/206 (68%), Gaps = 8/206 (3%)

Query  61   LLLFLTVISLLPAFLVMVTSFTRIVVVLAFLRAGLGIYQAPPGSVLIGLALFLTVFIMAP  120
            LLL + +++LLP   ++VTS+T+IVVVL++LR ++G+ Q PP  VL G+AL+++ F+MAP
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  121  VYAQVNEQAIEPFLRGEIDQ--VEAQERAAGPLREFMLRHTREKDLDLFVRMAEIENPVP  178
            V +    +A + +  G  +   V   +    P+R+F+L+HT E++  +F+R A+   P  
Sbjct  81   V-GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  179  NELPLT-----VVIPAFIISELKTAFTMGFMLYLPFLIIDMVVASILLSMGMFMLPPVMI  233
            +   L      ++ PAF +SEL  AF +GF+LYL F++ID+VVA+ L++MG+  + P  +
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  234  SLPFKLLLFVLVDGWYLVVRSLVESF  259
            ++PFKLLLFV +DGW +++++LV S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

275) fliP in NC_013939


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 79/190 (42%), Positives = 130/190 (69%), Gaps = 7/190 (3%)

Query  62   MVTSFTRLIIVFSFLRSALGTQQSPPNQVLIGLALFLTFFIMSPVLNDMYKNAVQPYMDG  121
            +VTS+T++++V+++LR+A+G QQ PPN VL G+AL+++ F+M+PV  + +K A Q Y  G
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAG  95

Query  122  --KLNFTQALVEAKKPLRKFLLKNTRKKELLTFIEISKVQRPKTPDDIPDS----VLIPA  175
              +  +   L   + P+R+FLLK+T  +E   F+  ++  +PK       S    +L PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  176  FITSELQTAFEIGFLLFLPFLVIDFVVASVLLSMGMMMLPPVMISLPFKILLFVLVDGWG  235
            F  SEL  AF IGFLL+L F+VID+VVA+ L++MG+  + P  +++PFK+LLFV +DGW+
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  236  LIVGSMVKSF  245
            +++ ++V S+
Sbjct  216  MLIHGLVLSY  225

276) HrcR in NC_007005


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 147/216 (69%), Gaps = 3/216 (1%)

Query  1    MIMEGINPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60
            M M ++ +++L +++  L+L+PF  +V T++ KI + L + RNAIGVQQVPPNM L G+A
Sbjct  13   MQMPDVGSLLLVVIM--LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVA  70

Query  61   LAATMFVMAPVAHDIQQRVHEHPLELSNADKLQSSLKVVIEPLQRFMTRNTDPDVVAHLL  120
            L  + FVMAPV+ +  +  ++     S+  ++   L    EP+++F+ ++T     A ++
Sbjct  71   LLVSCFVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFM  129

Query  121  ENTQRMWPKEMADQASKDDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180
             ++Q++WPK+ A     DDLL+  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+
Sbjct  130  RSAQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAM  189

Query  181  GMQMVSPMTlslplklllfvlVSGWSRLLDSLFYSY  216
            G+  V+P  +++P+KLLLFV + GWS L+++L  SY
Sbjct  190  GLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

277) fliP in NC_002696


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 85/205 (42%), Positives = 139/205 (68%), Gaps = 15/205 (7%)

Query  67   VLSLAPSIVIMTTSFVRIVVVLGLLRTAIGVQQSPPNPVLISLALFLTAIVMAP----TF  122
            +L+L P   ++ TS+ +IVVVLGLLR AIGVQQ PPN VL ++AL+++ +VMAP    +F
Sbjct  27   MLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAF  86

Query  123  --ERSYDAGIKPLLDQQMELPEAFEAASGPVKQFMLSQVDRDDLALFVRLSKIPQPRTAA  180
               ++Y+AG      ++  +   ++A   P +QF+L +    + A+F+R ++   P+  A
Sbjct  87   KAAQNYGAG-----SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKA  141

Query  181  ET----PLRVVTPAFMISELKRAFEIGFLLFIPFLVIDLVVASVLMSMGMMMLPPASISL  236
             T     L +++PAF +SEL  AF IGFLL++ F+VIDLVVA+ LM+MG+  + P+++++
Sbjct  142  TTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAI  201

Query  237  PFKLIFFVLVDGWRLVAGSLVESFQ  261
            PFKL++FV +DGW ++  +LV S++
Sbjct  202  PFKLLLFVAMDGWSMLIHGLVLSYR  226

278) fliP in NC_011916


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 85/205 (42%), Positives = 139/205 (68%), Gaps = 15/205 (7%)

Query  67   VLSLAPSIVIMTTSFVRIVVVLGLLRTAIGVQQSPPNPVLISLALFLTAIVMAP----TF  122
            +L+L P   ++ TS+ +IVVVLGLLR AIGVQQ PPN VL ++AL+++ +VMAP    +F
Sbjct  27   MLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAF  86

Query  123  --ERSYDAGIKPLLDQQMELPEAFEAASGPVKQFMLSQVDRDDLALFVRLSKIPQPRTAA  180
               ++Y+AG      ++  +   ++A   P +QF+L +    + A+F+R ++   P+  A
Sbjct  87   KAAQNYGAG-----SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKA  141

Query  181  ET----PLRVVTPAFMISELKRAFEIGFLLFIPFLVIDLVVASVLMSMGMMMLPPASISL  236
             T     L +++PAF +SEL  AF IGFLL++ F+VIDLVVA+ LM+MG+  + P+++++
Sbjct  142  TTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAI  201

Query  237  PFKLIFFVLVDGWRLVAGSLVESFQ  261
            PFKL++FV +DGW ++  +LV S++
Sbjct  202  PFKLLLFVAMDGWSMLIHGLVLSYR  226

279) fliP in NC_006370


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 86/210 (41%), Positives = 145/210 (70%), Gaps = 13/210 (6%)

Query  41   QIFLLMTALAFLPAMLLMTTSFTRIIIVLGILRQAMGLQQSPPNRVLVGIALTLSLFIMR  100
             ++L++  L++LP   ++ TS+T+I++VLG+LR+A+G+QQ PPN VL G+AL +S F+M 
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  101  PVIYDIHDNAVVPYQKGE-----MTMFEAAKVAEQPLRQFMLQQTRETDLEQILRIADEP  155
            PV  +   +A   Y  G      + +++A +   +P+RQF+L++T E +   ++R A++ 
Sbjct  80   PVGMEAF-KAAQNYGAGSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQI  135

Query  156  TP-DNVDDL---DFLLVMPAFILSELKTAFQIGFMLFIPFLIIDMVVASVLMAMGMMMLS  211
             P D+   L   D+L++ PAF LSEL  AF+IGF+L++ F++ID+VVA+ LMAMG+  ++
Sbjct  136  WPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVT  195

Query  212  PLIISLPFKLMVFVMVDGWSMTVGTLSASF  241
            P  +++PFKL++FV +DGWSM +  L  S+
Sbjct  196  PTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

280) Adeg_2033 in NC_013385


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  127 bits (465),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 79/195 (41%), Positives = 134/195 (69%), Gaps = 13/195 (6%)

Query  38   ILMTSFTRIVIVLSLLRSALGTHQAPPNQVLVGLALFLTVFIMAPVYERINQEAIRPYLA  97
            +++TS+T+IV+VL+LLR+A+G +Q PPN VL G+AL+++ F+MAPV      EA+++   
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV----GMEAFKAAQN  91

Query  98   NQITRQEAQVRGL-----RPLKEFMLRQVREKDLALFVNLAHLPQPVNKEEL----PLRV  148
                 +++++  L      P+++F+L++  E++ A+F+  A+   P +K        L +
Sbjct  92   YGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLI  151

Query  149  IIPAFLISELKTAFAMGFLLYLPFLVIDMVVASVLMSMGMFMLPPVMISLPFKLLLFVLV  208
            + PAF +SEL  AF +GFLLYL F+VID+VVA+ LM+MG+  + P  +++PFKLLLFV +
Sbjct  152  LAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAM  211

Query  209  DGWYLVVKSLVESFH  223
            DGW +++ +LV S++
Sbjct  212  DGWSMLIHGLVLSYR  226

281) hrcR in NC_005773


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  127 bits (464),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 90/214 (43%), Positives = 147/214 (69%), Gaps = 3/214 (1%)

Query  1    MEGVNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALA  60
            M +V +++L +++  L+L+PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL 
Sbjct  15   MPDVGSLLLVVIM--LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALL  72

Query  61   ATMFVMAPVAHEIQQRVHEHPLELGSADKLQSSLKTVIEPLQRFMTRNTDPDVVAHLLEN  120
             + FVMAPV+ E  +  ++     +   ++   L +  EP+++F+ ++T     A ++ +
Sbjct  73   VSCFVMAPVGMEAFKAAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRS  131

Query  121  TQRMWPKEMADQANKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGM  180
            +Q++WPK+ A   + +DLL+  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+
Sbjct  132  AQQIWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGL  191

Query  181  QMVSPMTlslplklllfvlVSGWSRLLDSLFYSY  214
              V+P  +++P+KLLLFV + GWS L+++L  SY
Sbjct  192  SQVTPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

282) ENC_28610 in NC_021046


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  127 bits (465),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 129/193 (67%), Gaps = 11/193 (5%)

Query  61   LMMTGFTRIVIVLGLMRNALGTPTAPPNQVLVGLALFLTFFVMSPVLNQIYEQAWQPLQA  120
            +++T++T+IV+VLGL+RNA+G    PPN VL G+AL+++ FVM+PV  + +  A +   +
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  121  NKITMETALKEGVK-PLRAFMLEQTREADLAMFARIA-------KTPTLTGPEDVPLSIL  172
            +  +    L ++ + P+R F+L +T E + A F R A       K+ TL + +   L IL
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDD---LLIL  152

Query  173  VPSFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIALPFKLMLFVLVD  232
             P+F  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +A+PFKL+LFV +D
Sbjct  153  APAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMD  212

Query  233  GWQLLVGSLAQSF  245
            GW +L+ +L  S+
Sbjct  213  GWSMLIHGLVLSY  225

283) fliP in NC_007947


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  127 bits (465),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 79/192 (42%), Positives = 132/192 (69%), Gaps = 9/192 (4%)

Query  65   LMMTGFTRIIIVLSLLRQALGTQSSPPNQVLVGLALFLTFFVMGPVFERIY--TEAYQP-  121
            +++T++T+I++VL+LLR+A+G Q  PPN VL G+AL+++ FVM+PV    +  ++ Y + 
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  122  FDEERITMQEAMVRGSIPLKEFMLKQTRESDLALFFKMSRA----DAVATPEEVPLRVLV  177
             D+ RI +     R   P+++F+LK+T E + A+F + ++     D  +T     L +L 
Sbjct  96   SDNSRIVVLLDACRE--PFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILA  153

Query  178  PAFVTSELKTAFQIGFAIFIPFLIIDMVVASILMSMGMMMVSPAIVALPFKLMLFVLVDG  237
            PAF  SEL  AF+IGF +++ F++ID+VVA+ LM+MG+  V+P+ VA+PFKL+LFV +DG
Sbjct  154  PAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDG  213

Query  238  WQLLLGSLAQSF  249
            W +L+ +L  S+
Sbjct  214  WSMLIHGLVLSY  225

284) fliP in NC_017390


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  127 bits (465),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 137/207 (67%), Gaps = 11/207 (5%)

Query  47   LVLLSSLTFLPAVLLMMTGFTRIIIVLGLMRNALGTPTAPPNQVLVGLALFLTFYVMSPV  106
            L+++  L +LP   +++T++T+I++VLGL+RNA+G    PPN VL G+AL+++ +VM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  107  FNQIYQQAWQ-PLQEDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQIA-------KA  158
              + ++ A +     D+  + V L+    P+R F+L +T E + A F + A       KA
Sbjct  82   GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKA  141

Query  159  GEFKGPEEVPLGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPAT  218
              +K+ +   L IL PAF  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ 
Sbjct  142  TTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTN  198

Query  219  IALPFKLMLFVLVDGWQLLMGSLAQSF  245
            +A+PFKL+LFV +DGW +L+ +L  S+
Sbjct  199  VAIPFKLLLFVAMDGWSMLIHGLVLSY  225

285) fliP in NC_012214


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  127 bits (465),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 137/207 (67%), Gaps = 11/207 (5%)

Query  47   LVLLSSLTFLPAVLLMMTGFTRIIIVLGLMRNALGTPTAPPNQVLVGLALFLTFYVMSPV  106
            L+++  L +LP   +++T++T+I++VLGL+RNA+G    PPN VL G+AL+++ +VM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  107  FNQIYQQAWQ-PLQEDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQIA-------KA  158
              + ++ A +     D+  + V L+    P+R F+L +T E + A F + A       KA
Sbjct  82   GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKA  141

Query  159  GEFKGPEEVPLGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPAT  218
              +K+ +   L IL PAF  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ 
Sbjct  142  TTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTN  198

Query  219  IALPFKLMLFVLVDGWQLLMGSLAQSF  245
            +A+PFKL+LFV +DGW +L+ +L  S+
Sbjct  199  VAIPFKLLLFVAMDGWSMLIHGLVLSY  225

286) A3UG_14735 in NC_018079


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  127 bits (464),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 78/190 (42%), Positives = 126/190 (67%), Gaps = 5/190 (2%)

Query  57   LMMTGFTRIIIVLGLMRNALGTPTAPPNQVLVGLSLFLTFFVMSPVFSQIYEKAWQPLQE  116
            +++T++T+I++VLGL+RNA+G    PPN VL G++L+++ FVM+PV  + +  A +    
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  117  NKITMEVALTEGVK-PLRAFMLDQTRESDLAMFARIAK----TPDIASPEEVPLSILVPA  171
            +  +  V L ++ + P+R F+L +T E + A F R A+        ++     L IL PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  172  FITSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPTTIALPFKLMLFVLVDGWQ  231
            F  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V PT +A+PFKL+LFV +DGW 
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  232  LLVGSLAQSF  241
            +L+ +L  S+
Sbjct  216  MLIHGLVLSY  225

287) fliP in NC_010338


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  127 bits (465),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 136/205 (67%), Gaps = 15/205 (7%)

Query  66   VLSLAPSIVIMTTSFVRIVVVLGLLRTAIGVQQSPPNPVIISLALFLTAIVMGP----TF  121
            +L+L P   ++ TS+ +IVVVLGLLR AIGVQQ PPN V+ ++AL+++ +VM+P    +F
Sbjct  27   MLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAF  86

Query  122  --EKSYDDGIKPLLDKQIEMPEAFDAAAAPVKVFMLRQVDQDDLALFIRLSKIEKPKTAV  179
               ++Y+ G       +  +   +DA   P + F+L++  + + A+F+R ++   PK   
Sbjct  87   KAAQNYGAG-----SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKA  141

Query  180  DT----PLKVVTPAFMISELKRAFEIGFLLFIPFLVIDLVVASVLMSMGMMMLPPATVSL  235
             T     L +++PAF +SEL  AF IGFLL++ F+VIDLVVA+ LM+MG+  + P+ V++
Sbjct  142  TTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAI  201

Query  236  PFKLIFFVLVDGWRLVAGSLVESFQ  260
            PFKL++FV +DGW ++  +LV S++
Sbjct  202  PFKLLLFVAMDGWSMLIHGLVLSYR  226

288) Cabther_B0538 in NC_016025


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  126 bits (462),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 89/202 (45%), Positives = 142/202 (71%), Gaps = 8/202 (3%)

Query  52   PFALIMMTSFVKISVVLSILRNALGTQQVPPNQVITGISLILTIFIMAPVAEKMLEEAGL  111
            PFA +++TS+ KI VVL++LRNA+G QQVPPN V+ G++L+++ F+MAPV+   +  A  
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91

Query  112  SDATAPVFTEMRADTLFKALDKGKEPLRAFLERNAHEADRRLFLGLAQRLAQKNGKDPNA  171
             +A +    + R   L   LD  +EP+R FL +++ E ++ +F+  AQ++  K+   + +
Sbjct  92   YGAGS---DNSRIVVL---LDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD--KATT  143

Query  172  ITVRDFRVVVPAFVTSQLTEAFQIGFLLFIPFLVIDMLVSNILQAMGMFMLSPTMISLPf  231
            +   D+ ++ PAF  S+LTEAF+IGFLL++ F+VID++V+N L AMG+  ++PT +++PF
Sbjct  144  LKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPF  203

Query  232  klllfvlvkGWVTLIQNLVLSY  253
            KLLLFV + GW  LI+ LVLSY
Sbjct  204  KLLLFVAMDGWSMLIHGLVLSY  225

289) fliP in NC_013971


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 82/201 (41%), Positives = 131/201 (66%), Gaps = 11/201 (5%)

Query  53   LTFLPAILLMMTGFTRIIIVLGLMRNALGTPTSPPNQVLVGLALFLTFYVMSPVFNQIYE  112
            L +LP   +++T++T+I++VLGL+RNA+G    PPN VL G+AL+++ +VM+PV  + + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  113  QAWQ-PLQEDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQ-------MAKAGEFKGP  164
             A +     D+  + V L+    P+R F+L +T E + A F +         KA  +K+ 
Sbjct  88   AAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  165  EEVPLGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIALPFK  224
            +   L IL PAF  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +A+PFK
Sbjct  148  D---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  225  LMLFVLVDGWQLLMGSLAQSF  245
            L+LFV +DGW +L+ +L  S+
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

290) fliP3 in NC_013961


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 82/201 (41%), Positives = 131/201 (66%), Gaps = 11/201 (5%)

Query  53   LTFLPAILLMMTGFTRIIIVLGLMRNALGTPTSPPNQVLVGLALFLTFYVMSPVFNQIYE  112
            L +LP   +++T++T+I++VLGL+RNA+G    PPN VL G+AL+++ +VM+PV  + + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  113  QAWQ-PLQEDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQ-------MAKAGEFKGP  164
             A +     D+  + V L+    P+R F+L +T E + A F +         KA  +K+ 
Sbjct  88   AAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  165  EEVPLGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIALPFK  224
            +   L IL PAF  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +A+PFK
Sbjct  148  D---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  225  LMLFVLVDGWQLLMGSLAQSF  245
            L+LFV +DGW +L+ +L  S+
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

291) Hore_16720 in NC_011899


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 77/192 (41%), Positives = 136/192 (71%), Gaps = 9/192 (4%)

Query  69   VMVTSFTRVIVVLGLIRQALATRRMPPNQVLIGLALFLTVFIMAPVWQDINE-QALQPYL  127
            ++VTS+T+++VVLGL+R+A++ +++PPN VL G+AL+++ F+MAPV  +++  +A Q Y 
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAAQNYG  93

Query  128  NNEITTQQA--YDRGIKPIRDFMFKQTREKDLALFVNMTGIERPENRADIPT----YVLI  181
                 ++     D    P+R+F++K+T E++ A+F+  +   +P ++A         +L 
Sbjct  94   AGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILA  153

Query  182  PAFVISELKTAFQIGFLIYLPFLMIDMVVASILMSMGMLMLPPIIISLPFKLLLFILVDG  241
            PAF +SEL  AF+IGFL+YL F++ID+VVA+ LM+MG+  + P  +++PFKLLLF+ +DG
Sbjct  154  PAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDG  213

Query  242  WYLVIESLVKTF  253
            W ++I++LV ++
Sbjct  214  WSMLIHGLVLSY  225

292) fliP in NC_017575


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 135/199 (68%), Gaps = 7/199 (3%)

Query  55   LGFLPAILLMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTFFVMSPVLDKVY-  113
            LG+LP   ++++S+T+I++VL+LLR+A+G Q  PPN VL G+AL+++ FVM+PV    + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  114  -TDAYVPLRDSKISVEQALDTAATPLRQFMLKQTREPDLALFAKMGN-LPPIASPDQVPM  171
             ++ Y +  D+   +   LD+   P+RQF+LK+T E + A+F + ++ + P   +  +  
Sbjct  88   AAQNYGAGSDNS-RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  172  RALI---PAFVTSELKTSFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFSLPFKIM  228
              L+   PAF  SEL  +F+IGF +++ F+VID+VVA  LM+MG+  VTP+  ++PFK++
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  229  LFVLVDGWHLLLGSLAQSF  247
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

293) fliP in NC_014310


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 81/199 (41%), Positives = 134/199 (68%), Gaps = 7/199 (3%)

Query  55   LGFLPAILLMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTFFVMSPVLDKVY-  113
            LG+LP   ++++S+T+I++VL+LLR+A+G Q  PPN VL G+AL+++ FVM+PV    + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  114  -TDAYVPLRDSKISVEQALDTAATPMRQFMLKQTREPDLALFAKMGN-LPPIASPDQVPM  171
             ++ Y +  D+   +   LD+   P RQF+LK+T E + A+F + ++ + P   +  +  
Sbjct  88   AAQNYGAGSDNS-RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  172  RALI---PAFVTSELKTAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFSLPFKIM  228
              L+   PAF  SEL  AF+IGF +++ F+VID+VVA  LM+MG+  VTP+  ++PFK++
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  229  LFVLVDGWHLLLGSLAQSF  247
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

294) fliP in NC_014121


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  126 bits (463),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 78/190 (42%), Positives = 126/190 (67%), Gaps = 5/190 (2%)

Query  57   LMMTGFTRIIIVLGLMRNALGTPTAPPNQVLVGLSLFLTFFVMSPVFSQIYEKAWQPLQE  116
            +++T++T+I++VLGL+RNA+G    PPN VL G++L+++ FVM+PV  + +  A +    
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  117  NKITMEVALTEGVK-PLRAFMLDQTRESDLAMFARIAK----TPDIASPEEVPLSILVPA  171
            +  +  V L ++ + P+R F+L +T E + A F R A+        ++     L IL PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  172  FITSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPTTIALPFKLMLFVLVDGWQ  231
            F  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V PT +A+PFKL+LFV +DGW 
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  232  LLVGSLAQSF  241
            +L+ +L  S+
Sbjct  216  MLIHGLVLSY  225

295) fliP in NC_017445


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  126 bits (463),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 132/201 (66%), Gaps = 11/201 (5%)

Query  53   LTFLPAVLLMMTGFTRIIIVLGLMRNALGTPTAPPNQVLVGLALFLTFYVMSPVFNQIYE  112
            L +LP   +++T++T+I++VLGL+RNA+G    PPN VL G+AL+++ +VM+PV  + + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  113  QAWQ-PLQEDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQIA-------KAGEFKGP  164
             A +     D+  + V L+    P+R F+L +T E + A F + A       KA  +K+ 
Sbjct  88   AAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSD  147

Query  165  EEVPLGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIALPFK  224
            +   L IL PAF  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +A+PFK
Sbjct  148  D---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  225  LMLFVLVDGWQLLMGSLAQSF  245
            L+LFV +DGW +L+ +L  S+
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

296) hrcR in NC_004578


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  126 bits (462),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 136/199 (69%), Gaps = 1/199 (0%)

Query  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60
            ++L+PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120
              ++     ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ A     
Sbjct  88   AAQNYGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTlslplkll  180
            +DLL+  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLL
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  181  lFVMVSGWSRLLDSLFYSY  199
            LFV + GWS L+++L  SY
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

297) fliP in NC_010468


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  126 bits (463),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 11/207 (5%)

Query  48   LILMTLVGLLPTMVLMMTCFTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPI  107
            L+++ ++GLLP   +++T +T++++VL+LLR+A+G+QQ PPN +L G+AL ++ +VM P+
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  WLNIYDHA---VVPFENDRITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIGG---AKG  161
             ++ +  A       +N RI +   L +   P+++F+L +T  +  A +M  +    +K+
Sbjct  82   GMEAFKAAQNYGAGSDNSRIVVL--LDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  NAA---DQDLSIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIV  218
            +A+    +DL I+ PA+ LSEL  AF+IGF++Y+ F+VIDL+VA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  219  SLPFKLMLFVLIDGWSLTIGTLTTSIR  245
            ++PFKL+LFV +DGWS+ I  L  S R
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSYR  226

298) hscR in NC_014366


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 156/200 (78%), Gaps = 5/200 (2%)

Query  22   PFVAVMVTAFTKlvvvlsllrnslglQQTPPNVVLNGLAIILSLYVMYPVLLQTQSLITS  81
            PF A++VT++TK+VVVL+LLRN++G+QQ PPN+VLNG+A+++S +VM PV    +++ ++
Sbjct  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAA  89

Query  82   HLKETPEAKLTVDRLIEIFDVGKKPLKDFLIRHSKESERHFFLESARQLLPEEDRNNIHE  141
            +   +   +    R++ ++D  + P+++FL++H+ E E+ FF+ SA+Q+ P +    +  
Sbjct  90   QNYGAGSDN---SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  142  DDFLVIVPAFTVSELSAAFQigfllflpfliidllVSNLLMALGIAMLSPTQVSLPFKLL  201
            DD+L++ PAFT+SEL+ AF+IGFLL+L F++IDL+V+N LMA+G++ ++PT+V++PFKLL
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  202  LFVFISGWTQLIHGLVLTYN  221
            LFV + GW+ LIHGLVL+Y 
Sbjct  207  LFVAMDGWSMLIHGLVLSYR  226

299) fliP in NC_021745


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 81/199 (41%), Positives = 135/199 (68%), Gaps = 7/199 (3%)

Query  55   LGFLPAILLMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTFFVMSPVLDKVY-  113
            LG+LP   ++++S+T+I++VL+LLR+A+G Q  PPN VL G+AL+++ FVM+PV    + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  114  -TDAYLPLRDSKISVEQALDTAATPLRQFMLKQTREPDLALFAKMGN-LPPIASPDQVPM  171
             ++ Y +  D+   +   LD+   P+RQF+LK+T E + A+F + ++ + P   +  +  
Sbjct  88   AAQNYGAGSDNS-RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  172  RALI---PAFVTSELKTAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFSLPFKIM  228
              L+   PAF  SEL  AF+IGF +++ F+VID+VVA  LM+MG+  VTP+  ++PFK++
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  229  LFVLVDGWHLLLGSLAQSF  247
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

300) fliP in NC_003296


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 81/199 (41%), Positives = 135/199 (68%), Gaps = 7/199 (3%)

Query  55   LGFLPAILLMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTFFVMSPVLDKVY-  113
            LG+LP   ++++S+T+I++VL+LLR+A+G Q  PPN VL G+AL+++ FVM+PV    + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  114  -TDAYLPLRDSKISVEQALDTAATPLRQFMLKQTREPDLALFAKMGN-LPPIASPDQVPM  171
             ++ Y +  D+   +   LD+   P+RQF+LK+T E + A+F + ++ + P   +  +  
Sbjct  88   AAQNYGAGSDNS-RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  172  RALI---PAFVTSELKTAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFSLPFKIM  228
              L+   PAF  SEL  AF+IGF +++ F+VID+VVA  LM+MG+  VTP+  ++PFK++
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  229  LFVLVDGWHLLLGSLAQSF  247
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

301) fliP in NC_007404


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 77/190 (41%), Positives = 130/190 (69%), Gaps = 7/190 (3%)

Query  69   MMTSFTRIIIVLSLLRHALGTQSSPPNQVLIGLALFLTLFVMGPTFDKIY--VEAYQPLA  126
            ++TS+T+I++VL+LLR+A+G Q  PPN VL G+AL+++ FVM+P     +   + Y + +
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA-G  95

Query  127  ENRIQMQEALDKGAVPLRAFMLKQTRESDLALFVKMSRSPAPKTAADI----PMRVLIPA  182
             +  ++   LD    P+R F+LK+T E + A+F++ ++   PK  A       + +L PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  183  YITSELKTAFQIGFAVFIPFLIIDMVVASILMAMGMMMVSPAIVALPFKIILFVLVDGWN  242
            +  SEL  AF+IGF +++ F++ID+VVA+ LMAMG+  V+P+ VA+PFK++LFV +DGW+
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  243  LLLGSLAQSF  252
            +L+ +L  S+
Sbjct  216  MLIHGLVLSY  225

302) Mahau_0870 in NC_015520


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 137/191 (72%), Gaps = 7/191 (3%)

Query  73   MLTSFTRIIVVLSFVRSALGLQQMPPNQVIIGLALFLTFFTMAPVATQINQTALQPYMNG  132
            ++TS+T+I+VVL+++R+A+G+QQ+PPN V+ G+AL+++ F MAPV+ +  ++A Q Y  G
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAG  95

Query  133  QIEQQQAI--DNAMVPLREFMFKETREKDLNLFVNLS----GMDKPEQLSDISSTVLIPA  186
              + +  +  D    P+R+F++K+T E++  +F+  +      DK+  L      +L PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  187  FIISELKTAFQIGFLIYVPFIVIDMVVATTLmsmgmmmippvmisLPFKVLLFIMVDGWN  246
            F +SEL  AF+IGFL+Y+ FIVID+VVA +LM+MG+  + P  +++PFK+LLF+ +DGW+
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  247  LVVQSLITSFH  257
            +++++L+ S++
Sbjct  216  MLIHGLVLSYR  226

303) B595_1074 in NC_018619


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  124 bits (452),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 81/201 (41%), Positives = 140/201 (70%), Gaps = 10/201 (4%)

Query  2    MLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARKEIQG  61
            M++TSY KI++ L LLRNA+GVQQ PP+ VLNG+AL++S +VM P G+  ++ A++   G
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  62   NAIPRDLFSAEGAETVFVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMT  121
            +  +R          + V L+  +EP+R FL+++TP  +   F + +Q+  P +    + 
Sbjct  96   SDNSR----------IVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLK  145

Query  122  ASDFVIVIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTANVLVAMQmmmlsplsislplkl  181
            + D++I+ PAF ++++ +AF IG L+YL F+VIDLV AN L+AM +  ++P ++++P+KL
Sbjct  146  SDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKL  205

Query  182  llvvmvDGWTLLLQGLMISFK  202
            LL V +DGW++L++GL++S++
Sbjct  206  LLFVAMDGWSMLIHGLVLSYR  226

304) B600_1069 in NC_018621


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  124 bits (452),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 81/201 (41%), Positives = 140/201 (70%), Gaps = 10/201 (4%)

Query  2    MLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARKEIQG  61
            M++TSY KI++ L LLRNA+GVQQ PP+ VLNG+AL++S +VM P G+  ++ A++   G
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  62   NAIPRDLFSAEGAETVFVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMT  121
            +  +R          + V L+  +EP+R FL+++TP  +   F + +Q+  P +    + 
Sbjct  96   SDNSR----------IVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLK  145

Query  122  ASDFVIVIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTANVLVAMQmmmlsplsislplkl  181
            + D++I+ PAF ++++ +AF IG L+YL F+VIDLV AN L+AM +  ++P ++++P+KL
Sbjct  146  SDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKL  205

Query  182  llvvmvDGWTLLLQGLMISFK  202
            LL V +DGW++L++GL++S++
Sbjct  206  LLFVAMDGWSMLIHGLVLSYR  226

305) B711_1071 in NC_018625


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  124 bits (452),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 81/201 (41%), Positives = 140/201 (70%), Gaps = 10/201 (4%)

Query  2    MLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARKEIQG  61
            M++TSY KI++ L LLRNA+GVQQ PP+ VLNG+AL++S +VM P G+  ++ A++   G
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  62   NAIPRDLFSAEGAETVFVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMT  121
            +  +R          + V L+  +EP+R FL+++TP  +   F + +Q+  P +    + 
Sbjct  96   SDNSR----------IVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLK  145

Query  122  ASDFVIVIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTANVLVAMQmmmlsplsislplkl  181
            + D++I+ PAF ++++ +AF IG L+YL F+VIDLV AN L+AM +  ++P ++++P+KL
Sbjct  146  SDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKL  205

Query  182  llvvmvDGWTLLLQGLMISFK  202
            LL V +DGW++L++GL++S++
Sbjct  206  LLFVAMDGWSMLIHGLVLSYR  226

306) fliP in NC_009664


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  122 bits (447),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 90/206 (44%), Positives = 141/206 (69%), Gaps = 10/206 (4%)

Query  86   VIIALTILSVAPALLLLTTCFTKILIVLGLTRNALGLQGTPPNQVLAGLALFLTMFVMAP  145
            V+I L +L+ A+   ++ T +TKI++VLGL RNA+G+Q  PPN VL G+AL+++ FVMAP
Sbjct  24   VVIMLGLLPFAA---MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  146  TFGAINDTAVQPYLKG-EKTATVAFTDGS-QPLKEFMLKQTRPEELALMTKAAKRDLPAT  203
              G     A Q Y  G +++  V + D+  +P+++F+LK+T   E A+  ++A++  P  
Sbjct  81   V-GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  204  REET----PLTTLVPAFALSELRSAFIIGFVIFIPFLVIDIVVsgalmslgmmmlPPVTV  259
            +  T     L  L PAF+LSEL  AF IGF++++ F+VID+VV+ ALM++G+  + P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  260  SLPFKLLLFVMIDGWGLIIKALVSSY  285
            ++PFKLLLFV +DGW+++I +LV SY
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

307) MU9_1792 in NC_020418


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  121 bits (443),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 79/179 (45%), Positives = 117/179 (66%), Gaps = 7/179 (3%)

Query  62   MTTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFVMSPVFDKVY--EDAYRPFS  119
            + TS+T+I++VLGLLRNA+G    PPN VL G+AL+++ FVM+PV    +   + Y + +
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA-G  95

Query  120  EDKISLETALDRGTAPLRTFMLGQTRENDLALFARIAKV----GEIQEAKDVPMRILIPA  175
             D+  +   LD    P+R F+L +T E + A+F R A+     +     K   + IL PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  176  FITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPATVSLPFKLMLFVLVDGW  234
            F  SEL  AF+IGF L++ F++IDLVVA+ LMA+G+  V P+ V++PFKL+LFV +DGW
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

308) PSE_4083 in NC_016642


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  121 bits (444),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 86/211 (41%), Positives = 142/211 (68%), Gaps = 17/211 (8%)

Query  51   LVMLLTVLSLAPSILIMVTSFTRIVVVLSLLRSAIGLQTAPPNAVMLSLALFLTAFVM--  108
            L++++ +L+L P   ++VTS+T+IVVVL+LLR+AIG+Q  PPN V+ ++AL+++ FVM  
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  109  --MPAFETAWDLGAKPMIEGTIEPQEA--FERASEPFHQFMRQQVRESDLLLF----QEL  160
              M AF +A + GA     G+ +++    ++   EPF+QF+ ++  E +  +F    Q++
Sbjct  81   VGMEAFKAAQNYGA-----GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQI  135

Query  161  -AKAPTPETPEDLSLRVLVPAFMISELRRAFEIGFLLYLPFLIIDLVIASVLMSMGMMML  219
             +K  +     D  L +L PAF +SEL  AF IGFLLYL F++IDLV+A+ LM+MG+  +
Sbjct  136  WPKDKATTLKSD-DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQV  194

Query  220  PPIVISLPFKLIFFVLVDGWQLIAGSLVRSF  250
             P  +++PFKL++FV +DGW ++  +LV S+
Sbjct  195  TPTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

309) fliP in NC_007802


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 136/206 (67%), Gaps = 10/206 (4%)

Query  46   LIALISVLSLAPGLAVMVTCFPFVVTVLSILRQAIGLQQSPPNMLIVSLALFLTYFVMAP  105
            L+ ++ +L+L P  A++VT +  +V VL++LR+AIG+QQ PPNM++ ++AL+++ FVMAP
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  106  VFEEAYRAGIAPLIAGELTPDAAIPL--IYEPFRGFMLNRVDTST----LVSLAELRPGA  159
            V  EA++A+     AG   +   + L    EPFR F+L++         + S  +++P  
Sbjct  81   VGMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  160  DAANPDPS---VLIPSFMLSEVERAFQIGFLVFLPFLVIDLVVAAILMSMGMMMVPPAIV  216
             A+   +    +L P+F LSE+  AF+IGFL++L F+VIDLVVA  LM+MG+  V P+ V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  217  SLPFKLAFFVVADGWALITGALVRSY  242
            ++PFKL +FV  DGW+++  +LV SY
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

310) Halha_0669 in NC_019978


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 135/188 (72%), Gaps = 7/188 (3%)

Query  73   SFTRIIVVLSFLRRALATQRMPPNQVLIGLAIFLTIYIMAPVGQDINQNALQPYLAEKID  132
            S+T+I+VVL++LR A++ Q++PPN VL G+A++++ ++MAPVG +  + A Q Y A   +
Sbjct  40   SYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSDN  98

Query  133  RGTA--FDRTIKPLRRFMFKQTREKDIALFVNLSNSKRPKG-PKELST---YVLIPAFII  186
                  +D    P+R+F++K+T E++ A+F+  ++  +PK+ +  L +    +L PAF +
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  187  SELKTAFQIGFMIYLPFVVIDMIVASTlmsmgmmmlppvmISLPFKILLFVLVDGWYLVI  246
            SEL  AF+IGF++YL F+VID++VA++LM+MG+  + P  +++PFK+LLFV +DGW ++I
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  247  KSLVETFK  254
             +LV +++
Sbjct  219  HGLVLSYR  226

311) fliP in NC_016745


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 128/189 (68%), Gaps = 11/189 (5%)

Query  62   SFTRIIVVLAVLRQALGLQQSPPNRVLIGIALSLTLLIMRPVLQDIYHHAFVPYDNGTIG  121
            S+T+I+VVL++LR+A+G+QQ PPN VL G+AL ++ ++M PV  + +  A   Y+ G+  
Sbjct  40   SYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSDN  98

Query  122  FEQALM--TAKAPLQTFMLAQTRETDLEQILNIAQE------PTDLSPEEVPFEVLIPAF  173
                ++  + + P++ F+L +T E +   ++  AQ+      +T L ++++   +L PAF
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL--ILAPAF  156

Query  174  VLSELKTAFQIGFMLFIPFLVIDLVVASVLMAMGMMMLSPLVISLPFKLMLFVLVDGWSM  233
             LSEL  AF+IGF+L++ F+VIDLVVA+ LMAMG+  ++P  +++PFKL+LFV +DGWSM
Sbjct  157  TLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSM  216

Query  234  TVGTLARSF  242
             +  L  S+
Sbjct  217  LIHGLVLSY  225

312) Sulku_1113 in NC_014762


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  119 bits (436),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 135/188 (72%), Gaps = 7/188 (3%)

Query  59   LVMTTFTRFVIVFGFLRQALGTQQVPPTQLLVMLALILTVFVMEPVATKAYDEGIKPYSE  118
            +V+T++T++V+V+G+LR+A+G QQVPP  +L  +AL+++ FVM PV+  A+  + + Y+ 
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  119  --EKITYDEAFEKTTEPFKNFMVRNTREKDLALFLR----IRHMQNPQSIKEVPLTIVIP  172
              ++      ++   EPF++F++++T E++ A+F+R    I+  +++ ++K   L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  173  AFMISELKTAFEIGFLLFLPFLVIDMVVAsilmsmgmmmlppvmismpFKILVFVMVDGW  232
            AF +SEL  AF IGFLL+L F+VID+VVA+ LM+MG+  + P  +++PFK+L+FV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  233  NLLIGNLI  240
            ++LI  L+
Sbjct  215  SMLIHGLV  222

313) B649_04650 in NC_020505


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 134/188 (72%), Gaps = 7/188 (3%)

Query  59   LVMTTFTRFVIVFGFLRQALGTQQVPPTQLLVMLALILTVFVMEPVATKAYEEGIKPYSE  118
            +V+T++T++V+V+G+LR+A+G QQVPP  +L  +AL+++ FVM PV+  A+  + + Y+ 
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  119  --EKITYDEAFEKTTEPFKSFMVRNTREKDLALFLR----IRHMENPQSIKEVPLTIVIP  172
              ++      ++   EPF+ F++++T E++ A+F+R    I+  +++ ++K   L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  173  AFMISELKTAFEIGFLLFLPFLVIDMVVAsilmsmgmmmlppvmismpFKILVFVMVDGW  232
            AF +SEL  AF IGFLL+L F+VID+VVA+ LM+MG+  + P  +++PFK+L+FV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  233  NLLIGNLI  240
            ++LI  L+
Sbjct  215  SMLIHGLV  222

314) fliP in NC_016589


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  119 bits (434),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 86/208 (42%), Positives = 142/208 (69%), Gaps = 13/208 (6%)

Query  56   MLLLTMLSFLPAMVLMMTSFTRIIIVLSLLRQALGTSSTPPNQVLVGLALFLSFFVMSPV  115
            +L++ ML++LP   +++TS+T+I++VL+LLR+A+G    PPN VL G+AL++S FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  116  LDRAYNDAYKPFSEGQIAMDQAV--TRGVAPFKQFMLKQTRESDLALFARIS-------K  166
               A++ A + ++ G       V       PF+QF+LK+T E + A+F R +       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  167  AAPMNGPEDVPLSLLVPSFITSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPT  226
            A+ +++ +   L +L P+F  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+PT
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  227  TIALPFKLMLFVLVDGWQLLIGSLAQSF  254
             +A+PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

315) fliP in NC_021287


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  118 bits (432),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 87/209 (42%), Positives = 146/209 (70%), Gaps = 15/209 (7%)

Query  56   MLLLTMLSFLPAMVLMMTSFTRIIIVLSLLRQALGTASTPPNQVLVGLALFLSFFVMSPV  115
            +L++ ML++LP   +++TS+T+I++VL+LLR+A+G    PPN VL G+AL++S FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  116  LDRAYN--DAYKPFSE-GQIAMDQAMTRGVAPFKQFMLKQTRESDLALFARIS-------  165
               A++  + Y + S+ ++I +     R   PF+QF+LK+T E + A+F R +       
Sbjct  82   GMEAFKAAQNYGAGSDNSRIVVLLDACR--EPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  166  KAAPMNGPEDVPLSLLVPSFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsP  225
            KA+ +++ +   L +L P+F  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+P
Sbjct  140  KATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTP  196

Query  226  TTIALPFKLMLFVLVDGWQLLIGSLAQSF  254
            T +A+PFKL+LFV +DGW +LI +L  S+
Sbjct  197  TNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

316) fliP in NC_009901


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  118 bits (430),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 92/209 (45%), Positives = 147/209 (71%), Gaps = 11/209 (5%)

Query  41   EILALMTVLSFLPAMLMMLTSFTRIIVVLGILRQALGLQQSPPNKVLIGIALVMTIFIMR  100
             +L ++ +L++LP   M++TS+T+I+VVLG+LR+A+G+QQ PPN VL G+AL+++ F+M 
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  101  PVGEEIYEKAFLPYDQGIIELPEAV--ERGEKPLRQFMLAQTRETDLEQMLKIADE----  154
            PVG E + KA   Y+ G  +    V  +    P+RQF+L +T E +    ++ A++    
Sbjct  80   PVGMEAF-KAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPK  138

Query  155  --PTTLTAEEIPFFVLMPAYVLSELKTAFQIGFLLFLPFLVIDlvvasvlmsmgmmmlsp  212
              +TTL ++++  ++L PA+ LSEL  AF+IGFLL+L F+VIDLVVA+ LM+MG+  ++P
Sbjct  139  DKATTLKSDDL--LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTP  196

Query  213  liislpFKLMVFVLVDGWSMTVSTLVASY  241
              +++PFKL++FV +DGWSM +  LV SY
Sbjct  197  TNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

317) Bphyt_5212 in NC_010676


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  118 bits (430),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 82/201 (41%), Positives = 138/201 (69%), Gaps = 7/201 (3%)

Query  17   LGLLPLIVTMTTSFTKFSIVLTLLRSAVGVQQAPGNmaisalalaatlvvmaPT-MEKIG  75
            LGLLP+   + TS+TK+ +VL LLR+A+GVQQ P NM ++++AL  +  VMAP  ME + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  76   GDLSLGERVERGQFPDVTEVYQAVRGPLGEFMMEHSRPSERAFLVTAAKRIDPARDA---  132
            +  + G   + ++   +  + +A R P+ +F++ H+   E+AF++ +A++I P   A   
Sbjct  88   AAQNYGAGSDNSR---IVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTL  144

Query  133  QETDFSLLIPAFMISEISSGFEAGFLLYMAFLIIDLVIANVLTAMGMVMLSPTTVSTPLK  192
            +  D+ +L PAF +SE++ +F  GFLLY+ F++IDLV+AN L AMG+  ++PT V+ P+K
Sbjct  145  KSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  193  LFVLVSVSGISKLMHGLIVSY  213
            L+++V++ G S L+HGL++SY
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

318) Tlie_0100 in NC_016148


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  118 bits (431),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 130/191 (69%), Gaps = 7/191 (3%)

Query  71   MVTSFTRILVVLGFLRSAIGVQQLPPNQVIVTLAIFLTLFIMRPVWEEVYK--EAYIPLQ  128
            +VTS+T+I+VVLG+LR+AIGVQQ+PPN V+  +A++++ F+M PV  E +K  + Y +  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA-G  95

Query  129  EGQITTQEAMDRTLKPVREFMLSQTKEKELSLMISLSDL----ERPNTPEDVPTLVLLPA  184
             ++      +D    P R+F+L +T E+E ++ +  ++     +++ T      L+L PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  185  FMLSELKTAFQMGVVLFVPFLVIDMIVSSVLMSMGMIMLPPMLVSLPFKVLLFVLADGWD  244
            F LSEL  AF++G +L++ F+VID++V++ LM+MG+  + P  V++PFK+LLFV  DGW 
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  245  LVIVSLVKSFR  255
            ++I +LV S+R
Sbjct  216  MLIHGLVLSYR  226

319) bgla_1g00250 in NC_015381


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  117 bits (428),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 86/208 (42%), Positives = 142/208 (69%), Gaps = 13/208 (6%)

Query  80   MLLLTMLSFLPAIVLMMTSFTRIIIVLSLLRQALGTTTTPPNQVLVGLALFLTLFVMSPV  139
            +L++ ML++LP   +++TS+T+I++VL+LLR+A+G    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  140  LDRAYTDGYQPFSAGTLPMDQAV--QRGLAPFKTFMLKQTRESDLALFARIS-------K  190
               A+  + Q ++AG+      V  +    PF+ F+LK+T E + A+F R +       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  191  APPMQGPEDVPLPLLVPAFLTSELKTGFQIGFTIFIPFLIIDLvvasvlmsmgmmmvsPT  250
            A  +++ +   L +L PAF  SEL  +F+IGF +++ F++IDLVVA+ LM+MG+  V+PT
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  251  TISLPFKLMLFVLVDGWQLLIGSLAQSF  278
             +++PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

320) Tsac_1796 in NC_017992


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  117 bits (427),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 78/192 (41%), Positives = 137/192 (72%), Gaps = 8/192 (4%)

Query  65   IMMTSFTRIIVVLSFLRNALGLQQMPPNQVLIGLALFLTFFIMAPVGAQINKDSIQPYMQ  124
            +++TS+T+I+VVL++LRNA+G+QQ+PPN VL G+AL+++ F+MAPVG +  K + Q Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  125  GKITPQEAYV--KARDPLKSFMLKQTRKNDLNLFISLS-----KLKVKSVNDVPLRVVIP  177
            G   ++   +    R+P++ F+LK+T   +  +F+  +     K K  +++   L ++ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  178  SFIISELKTAFEigfiiyipfliiDMVVASVLMSMGMFMLPPVLISLPFKLLLFILVDGW  237
            +F +SEL  AF IGF++Y+ F++ID+VVA+ LM+MG+  + P  +++PFKLLLF+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  238  NILVKSLVIGFR  249
            ++L+ +LV+++R
Sbjct  215  SMLIHGLVLSYR  226

321) Sked_31060 in NC_013521


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (425),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 90/205 (44%), Positives = 141/205 (69%), Gaps = 7/205 (3%)

Query  84   LLGITLLSVAPSLLLMMTSFTKIFVVLALTRNALGLQGVPPNQVLAGLALFLSLFIMAPI  143
            LL + +L++ P   +++TS+TKI VVL+L RNA+G+Q VPPN VL G+AL++S F+MAP+
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  144  IGQVNELGVQPYVNGGLDFGAAV--EAGSAPLREFMLGQTREEDIALMTRAADQPNPTDP  201
              +    + Q Y  G+ +    V  +A   P+R+F+L +T E + A+  R+A+Q  P D 
Sbjct  82   GMEAFK-AAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  202  STV----PMLTLIPSFMLSELRAAFIIGFVIFIPFLVIDlvvsaslmsmgmmmlppvmIS  257
            +T      +L L P+F LSEL  AF IGF++++ F+VIDLVV+ +LM+MG+  + P  ++
Sbjct  141  ATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVA  200

Query  258  LPFKILLFVLVDGWGMIVTALVGSY  282
            +PFK+LLFV +DGW+M++ +LV SY
Sbjct  201  IPFKLLLFVAMDGWSMLIHGLVLSY  225

322) fliP in NC_009348


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 85/200 (43%), Positives = 138/200 (69%), Gaps = 10/200 (5%)

Query  52   LSFLPAVVIMMTSFTRIIIVLGILRQAIGLQQSPSNQVLIGIALFMSFFIMSPV-LDRIN  110
            L++LP   +++TS+T+I++VLG+LR+AIG+QQ P+N VL G+AL++S F+M+PV ++ ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  111  DEALQPYLAETIQAREA--LEKAELPIHQFMLSQTRIKDLNTFMEIADVQVDKPAEVPLR  168
                Q Y A + ++R    L+    P++QF+L +T  ++   FM  A+    K     L+
Sbjct  88   AA--QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLK  145

Query  169  -----VLIPAFVTSELKTAFQIGFMLFLPFLVIDLVVAsilmamgmmmlspmlvslPFKL  223
                 +L PAF  SEL  AF+IGF+L+L F+VIDLVVA+ LMAMG+  ++P  V++PFKL
Sbjct  146  SDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKL  205

Query  224  MLFVMVDGWNLILGSLANSF  243
            +LFV +DGW++++ +L  S+
Sbjct  206  LLFVAMDGWSMLIHGLVLSY  225

323) Jden_2011 in NC_013174


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 83/197 (43%), Positives = 140/197 (72%), Gaps = 21/197 (10%)

Query  93   MTSFTKILVVLSITRNALGLQSVPPNQVLAGIALFLSIFIMGPVLTSINDIAVQPFLAGD  152
            +TS+TKI+VVL++ RNA+G+Q VPPN VL G+AL++S F+M+PV       ++++F A++
Sbjct  38   VTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV-------GMEAFKAAQ  90

Query  153  LDFAGA---------LDQGSGPLRDFMLAHTRESDIALITRAAEA----ENPADPQSVPL  199
             +++++         LD    P+R+F+L HT E + A++ R+A+     ++++  +S  L
Sbjct  91   -NYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL  149

Query  200  MTLIPAFLLSELRAAFIIGFVIFLPFLVIDLVisaslmslgmmmlppiiislpFKLLLFV  259
            + L PAF LSEL  AF IGF+++L F+VIDLV++ +LM++G+  + P  +++PFKLLLFV
Sbjct  150  LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFV  209

Query  260  LVDGWSLIVTALIGSYR  276
             +DGWS+++ +L+ SYR
Sbjct  210  AMDGWSMLIHGLVLSYR  226

324) fliP in NC_018632


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 142/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTNEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +  +   L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

325) fliP in NC_018692


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 142/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTNEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +  +   L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

326) fliP in NC_018678


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 142/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTNEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +  +   L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

327) fliP in NC_017831


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 144/208 (70%), Gaps = 13/208 (6%)

Query  54   MLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV  113
            +L++ ML++LP   +++TS+T+I++VL+LLR+AIG    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  114  LDRAYNDAYKPFSEGTLQMDQAV--QRGTAPFKAFMLKQTRETDLALFAKIS-------K  164
               A++ A + ++ G+ +    V  +    PF+ F+LK+T E + A+F + +       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  165  AAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPA  224
            A+ +++ +   L +L PAF  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+P+
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  225  TVSLPFKLMLFVLVDGWQLLIGSLAQSF  252
             V++PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

328) fliP in NC_007434


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 144/208 (70%), Gaps = 13/208 (6%)

Query  54   MLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV  113
            +L++ ML++LP   +++TS+T+I++VL+LLR+AIG    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  114  LDRAYNDAYKPFSEGTLQMDQAV--QRGTAPFKAFMLKQTRETDLALFAKIS-------K  164
               A++ A + ++ G+ +    V  +    PF+ F+LK+T E + A+F + +       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  165  AAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPA  224
            A+ +++ +   L +L PAF  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+P+
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  225  TVSLPFKLMLFVLVDGWQLLIGSLAQSF  252
             V++PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

329) fliP in NC_021884


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 144/208 (70%), Gaps = 13/208 (6%)

Query  54   MLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV  113
            +L++ ML++LP   +++TS+T+I++VL+LLR+AIG    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  114  LDRAYNDAYKPFSEGTLQMDQAV--QRGTAPFKAFMLKQTRETDLALFAKIS-------K  164
               A++ A + ++ G+ +    V  +    PF+ F+LK+T E + A+F + +       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  165  AAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPA  224
            A+ +++ +   L +L PAF  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+P+
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  225  TVSLPFKLMLFVLVDGWQLLIGSLAQSF  252
             V++PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

330) fliP in NC_007651


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (424),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 143/208 (69%), Gaps = 13/208 (6%)

Query  77   MLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV  136
            +L++ ML++LP   +++TS+T+I++VL+LLR+AIG    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  137  LDKAYTDAYKPFSEGTLQMDQAV--QRGTAPFKTFMLKQTRETDLALFAKIS-------K  187
               A+  A + ++ G+ +    V  +    PF+ F+LK+T E + A+F + +       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  188  AAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPA  247
            A+ +++ +   L +L PAF  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+P+
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  248  TVSLPFKLMLFVLVDGWQLLIGSLAQSF  275
             V++PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

331) fliP in NC_004547


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (424),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 81/199 (41%), Positives = 137/199 (69%), Gaps = 7/199 (3%)

Query  64   LTFLPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVLNRVYD  123
            L +LP A +++TS+T+I++VL+LLRNA+G    PPN VL G++L+++ FVM+PV    + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  124  --EAYLPFSQDQISMEVAIERGAEPLREFMLRQTRETDLALFTRLAEI--PEIQGP--EA  177
              + Y + + D+  + V ++   EP+R+F+L++T E + A+F R A+   P  ++    +
Sbjct  88   AAQNYGA-GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  178  VPMRVLLPAFVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLM  237
              + +L PAF  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  238  LFVLVDGWQLLLGSLAQSF  256
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

332) Thexy_1317 in NC_015555


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 78/192 (41%), Positives = 137/192 (72%), Gaps = 8/192 (4%)

Query  65   IMMTSFTRIIVVLSFLRNALGLQQMPPNQVLIGLALFLTFFIMAPVGSQINKDSIQPYMQ  124
            +++TS+T+I+VVL++LRNA+G+QQ+PPN VL G+AL+++ F+MAPVG +  K + Q Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  125  GKITPQEAYV--KARDPLKNFMLKQTRKNDLNLFINLS-----KLKVKSVNDVPLRVVIP  177
            G   ++   +    R+P+++F+LK+T   +  +F+  +     K K  +++   L ++ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  178  SFIISELKTAFEigfiiyipfliiDMVVASVLMSMGMFMLPPVLISLPFKLLLFILVDGW  237
            +F +SEL  AF IGF++Y+ F++ID+VVA+ LM+MG+  + P  +++PFKLLLF+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  238  NILAKSLVIGFR  249
            ++L  +LV+++R
Sbjct  215  SMLIHGLVLSYR  226

333) Celgi_0475 in NC_015671


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (422),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 92/205 (45%), Positives = 137/205 (67%), Gaps = 7/205 (3%)

Query  78   LLAITLLSVAPALLLMMTSFTKIFVVLAFTRNALGLQGVPPNQVLAGLALFLSMFVMAPV  137
            LL + +L++ P   +++TS+TKI VVL++ RNA+G+Q VPPN VL G+AL++S FVMAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  138  LGDVNADAVQPYLDGELTFSQAV--DVGSGPLRSFMLDHTREQDLALLTRAADQ----PN  191
             G     A Q Y  G       V  D    P+R F+L HT E++ A++ R+A+Q     +
Sbjct  82   -GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  192  PATPEDVPLATLIPAFLLSELRSAFIMGFVIFVPFLVIDLVVSavlmamgmmmlppvmIS  251
            ++T     L  L PAF LSEL  AF +GF++++ F+VIDLVV+  LMAMG+  + P  ++
Sbjct  141  ATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVA  200

Query  252  LPFKVLLFVLVDGWGLVVTSLVRSY  276
            +PFK+LLFV +DGW++++ +LV SY
Sbjct  201  IPFKLLLFVAMDGWSMLIHGLVLSY  225

334) fliP in NC_009076


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 144/208 (70%), Gaps = 13/208 (6%)

Query  77   MLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV  136
            +L++ ML++LP   +++TS+T+I++VL+LLR+AIG    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  137  LDRAYNDAYKPFSEGTLQMDQAV--QRGTAPFKAFMLKQTRETDLALFAKIS-------K  187
               A++ A + ++ G+ +    V  +    PF+ F+LK+T E + A+F + +       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  188  AAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPA  247
            A+ +++ +   L +L PAF  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+P+
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  248  TVSLPFKLMLFVLVDGWQLLIGSLAQSF  275
             V++PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

335) fliP in NC_009074


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 144/208 (70%), Gaps = 13/208 (6%)

Query  77   MLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV  136
            +L++ ML++LP   +++TS+T+I++VL+LLR+AIG    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  137  LDRAYNDAYKPFSEGTLQMDQAV--QRGTAPFKAFMLKQTRETDLALFAKIS-------K  187
               A++ A + ++ G+ +    V  +    PF+ F+LK+T E + A+F + +       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  188  AAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPA  247
            A+ +++ +   L +L PAF  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+P+
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  248  TVSLPFKLMLFVLVDGWQLLIGSLAQSF  275
             V++PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

336) BPC006_I0032 in NC_018527


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 144/208 (70%), Gaps = 13/208 (6%)

Query  77   MLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV  136
            +L++ ML++LP   +++TS+T+I++VL+LLR+AIG    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  137  LDRAYNDAYKPFSEGTLQMDQAV--QRGTAPFKAFMLKQTRETDLALFAKIS-------K  187
               A++ A + ++ G+ +    V  +    PF+ F+LK+T E + A+F + +       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  188  AAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPA  247
            A+ +++ +   L +L PAF  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+P+
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  248  TVSLPFKLMLFVLVDGWQLLIGSLAQSF  275
             V++PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

337) fliP in NC_012695


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (423),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 144/208 (70%), Gaps = 13/208 (6%)

Query  77   MLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV  136
            +L++ ML++LP   +++TS+T+I++VL+LLR+AIG    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  137  LDRAYNDAYKPFSEGTLQMDQAV--QRGTAPFKAFMLKQTRETDLALFAKIS-------K  187
               A++ A + ++ G+ +    V  +    PF+ F+LK+T E + A+F + +       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  188  AAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPA  247
            A+ +++ +   L +L PAF  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+P+
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  248  TVSLPFKLMLFVLVDGWQLLIGSLAQSF  275
             V++PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

338) bglu_1g00190 in NC_012724


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (425),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 144/208 (70%), Gaps = 13/208 (6%)

Query  67   MLLLTMLSFLPAIVLMMTSFTRIIIVLSLMRQALGTATTPPNQVLVGLALFLTLFVMSPV  126
            +L++ ML++LP   +++TS+T+I++VL+L+R+A+G    PPN VL G+AL+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  127  IDRAYNDGYKPFSAGTLPMDQAV--QRGLAPFKTFMLKQTREGDLALFAKIA-------K  177
               A++ + + ++AG+      V  +    PF+ F+LK+T E + A+F + A       K
Sbjct  82   GMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  178  APAMQGPEDVPLPLLVPAFVTSELKTGFQIGFTIFIPFLIIDLvvasvlmsmgmmmvsPT  237
            A ++++ +   L +L PAF  SEL  +F+IGF +++ F++IDLVVA+ LM+MG+  V+PT
Sbjct  141  ATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  238  TISLPFKLMLFVLVDGWQLLIGSLAQSF  265
             +++PFKL+LFV +DGW +LI +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

339) Dd1591_1885 in NC_012912


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (425),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 82/203 (41%), Positives = 138/203 (68%), Gaps = 9/203 (4%)

Query  18   LSLIPLSMIVCTCFLKISMVLMITRNAIGVQQVPPNMALYGIALAATVFVMAPV----FS  73
            L+L+P++ +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + FVMAPV    F 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  74   DIKQRFQDAPVDFSNLDALESSVTRGIEPLQKFMSRNTDPDILTHLHENSLRMWPAAMSE  133
               Q +  ++ +   +  L++      EP+++F+ ++T     + +  ++ ++WP   + 
Sbjct  88   A-AQNYGAGSDNSRIVVLLDAC----REPFRQFLLKHTPEREKAFFMRSAQQIWPKDKAT  142

Query  134  KITTQSILLIVPAYVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPTTlslp  193
             + ++ +L++ PA+ LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+PT +++P
Sbjct  143  TLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIP  202

Query  194  lklllfvlVNGWTRLLDGLFYSY  216
            +KLLLFV ++GW+ L++GL  SY
Sbjct  203  FKLLLFVAMDGWSMLIHGLVLSY  225

340) fliP in NC_006177


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  116 bits (424),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 127/188 (68%), Gaps = 7/188 (3%)

Query  70   TSFTRIIVVFGFIRTALGLQQTPPNQVLIGLALFLTAAVMMPTFSEINQTAVQPYLAGEI  129
            TS+T+I+VV+G++R A+G+QQ PPN VL G+AL+++  VM P   E  ++A Q Y AG  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSD  97

Query  130  DQ--VEAIERGALPLKAFMLRQTREADLGLMLEVSGQPAPEGPEDV----SFLTVVPAFA  183
            +   V  ++    P++ F+L++T E + ++ +  + Q  P +         +L + PAF+
Sbjct  98   NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  184  LSELKTAFTMGFLIYLPFIIIDLITASLMMSLGMMMVPPTLISLPFKVLLFVLVDGWHLV  243
            LSEL  AF +GFL+YL FI+IDL+ A+ +M++G+  V PT +++PFK+LLFV +DGW ++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  244  VESLVRSF  251
            +++LV S+
Sbjct  218  IHGLVLSY  225

341) fliP in NC_019393


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 141/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +      L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

342) fliP in NC_018679


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 141/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +      L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

343) MADE_1005950 in NC_011138


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 141/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +      L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

344) fliP in NC_021716


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 141/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +      L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

345) fliP in NC_021710


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 141/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +      L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

346) fliP in NC_021717


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 141/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +      L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

347) fliP in NC_021712


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 141/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +      L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

348) fliP in NC_021714


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 141/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +      L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

349) fliP in NC_021713


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 141/206 (69%), Gaps = 8/206 (3%)

Query  48   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAPV  107
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  FEEVNE-RALQPYL--NEQLTSLDALEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  161
               ++  +A Q Y   +++   +  L+  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  162  KYADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  221
            K +      L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  222  SLPFKLMLFVLVDGWNLIFGTLATSF  247
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

350) fliP in NC_015554


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 141/206 (69%), Gaps = 8/206 (3%)

Query  49   LFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILVGVSLFLSMFIMAPV  108
            L+++  L+L+P   M++TS+T+I+VVL++LR+AIG+QQ P+N +L GV+L++S F+MAPV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  109  FEEINE-RALQPYL--SEQMTSLDAIEQAKGPMRAFMLSQTRVKDLETFVRIAGD---EG  162
               ++  +A Q Y   S++   +  ++  + P R F+L +T  ++   F+R A +    +
Sbjct  82   --GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  163  KYADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmmlspmiV  222
            K +      L IL PAF  SEL  AF+IGF+L++ F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  223  SLPFKLMLFVLVDGWNLIFGTLATSF  248
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

351) Dd586_1882 in NC_013592


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 84/203 (42%), Positives = 139/203 (69%), Gaps = 9/203 (4%)

Query  18   LSLIPLAMIVCTCFLKISMVLMLTRNAIGVQQVPPNMALYGVALAATLFVMAPV----FS  73
            L+L+P+A +V T + KI +VL L RNAIGVQQVPPNM L GVAL  + FVMAPV    F 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  74   DIKLRFQDAPVDFSSLDALESSVTRGIEPLQKFMSRNTDPDILTHLHENSLRMWPAAMTE  133
              +  +  ++ +   +  L++      EP+++F+ ++T     + +  ++ ++WP   + 
Sbjct  88   AAQ-NYGAGSDNSRIVVLLDAC----REPFRQFLLKHTPEREKAFFMRSAQQIWPKDKAT  142

Query  134  KITTQNILLILPAYVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPTTlslp  193
             + ++++L++ PA+ LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+PT +++P
Sbjct  143  TLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIP  202

Query  194  lklllfvlVNGWTRLLDGLFYSY  216
            +KLLLFV ++GW+ L++GL  SY
Sbjct  203  FKLLLFVAMDGWSMLIHGLVLSY  225

352) PC1_2585 in NC_012917


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 136/199 (69%), Gaps = 7/199 (3%)

Query  64   LTFIPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVLNRVYE  123
            L ++P A +++TS+T+I++VL+LLRNA+G    PPN VL G++L+++ FVM+PV    + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  124  --EAYLPFSQDQISMEVAIERGAEPVREFMLRQTRETDLALFTRLAEI--PEIQGP--EA  177
              + Y + + D+  + V ++   EP R+F+L++T E + A+F R A+   P  ++    +
Sbjct  88   AAQNYGA-GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  178  VPMRVLLPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLM  237
              + +L PAF  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  238  LFVLVDGWQLLLGSLAQSF  256
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

353) fliP in NC_015976


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (419),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 78/193 (41%), Positives = 131/193 (68%), Gaps = 17/193 (8%)

Query  87   TSFTRIIIVLSLLRQALGLAQTPPNQVLVGLALFLSMFVMRP-AIDQISATAYTPYGEG-  144
            TS+T+I++VL+LLR+A+G+ Q PPN VL G+AL++S FVM P +++ + A+    YG G 
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQ--NYGAGS  96

Query  145  ---QITVEEAISRSARVLHGFMTKQTRQSDLALFQNLANAPAFRSPDDIP------FSIL  195
               +I V     R +  ++ F+ K+T + + A+F  + +A  +++ D         + IL
Sbjct  97   DNSRIVVLLDACREP--FRQFLLKHTPEREKAFF--MRSAQQIWPKDKATTLKSDDLLIL  152

Query  196  LPAFVTSELKTAFQIGFMIFLPFLIIDLVVSSTLMALGMMMLSPTIISMPFKLLLFVLVD  255
             PAF  SEL  AF+IGF+++L F++IDLVV+++LMA+G+  ++PT +++PFKLLLFV +D
Sbjct  153  APAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMD  212

Query  256  GWALTMGSLAASF  268
            GW++ + +L  S+
Sbjct  213  GWSMLIHGLVLSY  225

354) fliP in NC_007575


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 131/188 (70%), Gaps = 7/188 (3%)

Query  61   LVMTTFTRFVIVFGFLRQALGTQQVPPTQLLVMLGMILTFFVMEPVGIKAYEDGIKPYIE  120
            +V+T++T++V+V+G+LR+A+G QQVPP  +L  ++++++ FVM PVG+ A+  + + Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  121  EKIGYEEA--FDKTALPFKNFMIRNTREKDLALFFR----IRKMQNPTTIAEVPLSIIIP  174
                      +D    PF++F++++T E++ A+F R    I+  +++TT+    L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  175  AFVISELKTAFEIGFLLFLPFLVIDMVvasilmsmgmmmlppvmiaLPFKILIFILIDGW  234
            AF +SEL  AF IGFLL+L F+VID+VVA+ LM+MG+  + P  +A+PFK+L+F+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  235  NLLIGNLI  242
            ++LI  L+
Sbjct  215  SMLIHGLV  222

355) fliP in NC_008570


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 138/200 (69%), Gaps = 10/200 (5%)

Query  62   LSFLPAIVIMMTSFTRIIIVLGILRQAIGLQQSPSNQVLIGIALFMSFFIMSPV-LDRIN  120
            L++LP   +++TS+T+I++VLG+LR+AIG+QQ P+N VL G+AL++S F+M+PV ++ ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  121  NEALQPYLAETIQAKEA--LEKAELPIHQFMLAQTRIKDLNTFMEIANVQVDKPADVPLR  178
                Q Y A + +++    L+    P++QF+L +T  ++   FM  A+    K     L+
Sbjct  88   AA--QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLK  145

Query  179  -----VLIPAFVTSELKTAFQIGFMLFLPFLVIDLVVAsilmamgmmmlspmlvslPFKL  233
                 +L PAF  SEL  AF+IGF+L+L F+VIDLVVA+ LMAMG+  ++P  V++PFKL
Sbjct  146  SDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKL  205

Query  234  MLFVMVDGWNLILGSLANSF  253
            +LFV +DGW++++ +L  S+
Sbjct  206  LLFVAMDGWSMLIHGLVLSY  225

356) fliP in NC_021150


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 77/187 (42%), Positives = 125/187 (67%), Gaps = 13/187 (6%)

Query  73   RIIIVLGLLRTAIGTPAAPPNQVllglalfltlFIMSPVLDRTYQSAWLPFS--RDEIGF  130
            +I++VLGLLR AIG    PPN VL G+AL+++ F+M+PV   ++++A   ++   D+  +
Sbjct  43   KIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSDNSRI  101

Query  131  EQFLETGSQPFREFMLAQTRESDLALFARLA-------RLGELEGPEQVPLRVLMPAFVT  183
              +L++  +PFR+F+L +T E + A+F R A       +   L + +   L +L PAF  
Sbjct  102  VVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDD---LLILAPAFTL  158

Query  184  SELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLI  243
            SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+LFV +DGW +LI
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  244  GSLAQSF  250
             +L  S+
Sbjct  219  HGLVLSY  225

357) fliP in NC_021149


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 77/187 (42%), Positives = 125/187 (67%), Gaps = 13/187 (6%)

Query  73   RIIIVLGLLRTAIGTPAAPPNQVllglalfltlFIMSPVLDRTYQSAWLPFS--RDEIGF  130
            +I++VLGLLR AIG    PPN VL G+AL+++ F+M+PV   ++++A   ++   D+  +
Sbjct  43   KIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSDNSRI  101

Query  131  EQFLETGSQPFREFMLAQTRESDLALFARLA-------RLGELEGPEQVPLRVLMPAFVT  183
              +L++  +PFR+F+L +T E + A+F R A       +   L + +   L +L PAF  
Sbjct  102  VVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDD---LLILAPAFTL  158

Query  184  SELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLI  243
            SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+LFV +DGW +LI
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  244  GSLAQSF  250
             +L  S+
Sbjct  219  HGLVLSY  225

358) fliP in NC_012560


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 77/187 (42%), Positives = 125/187 (67%), Gaps = 13/187 (6%)

Query  73   RIIIVLGLLRTAIGTPAAPPNQVllglalfltlFIMSPVLDRTYQSAWLPFS--RDEIGF  130
            +I++VLGLLR AIG    PPN VL G+AL+++ F+M+PV   ++++A   ++   D+  +
Sbjct  43   KIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSDNSRI  101

Query  131  EQFLETGSQPFREFMLAQTRESDLALFARLA-------RLGELEGPEQVPLRVLMPAFVT  183
              +L++  +PFR+F+L +T E + A+F R A       +   L + +   L +L PAF  
Sbjct  102  VVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDD---LLILAPAFTL  158

Query  184  SELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLI  243
            SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+LFV +DGW +LI
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  244  GSLAQSF  250
             +L  S+
Sbjct  219  HGLVLSY  225

359) Thein_0183 in NC_015681


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (417),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 78/190 (42%), Positives = 129/190 (68%), Gaps = 7/190 (3%)

Query  63   MVTSFTRLVIVFSLLRHALGTQQTPPNQVlialalfltffiMKPVFSQAYNQAISPYLAG  122
            +VTS+T++V+V++LLR+A+G QQ PPN VL ++AL+++ F+M PV  +A++ A   Y AG
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAG  95

Query  123  EIGDQ--EFFRDVVKPFREFMFKNTRKKDLALMIRLSGAPKPENKEDV----STLTLIPA  176
                +   ++     PFR+F++K+T  ++ A+ +R +    P +K         L L PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  177  FMISELRTAFEIGFLLYIPFLIIDMVVASVLLSMGMMMLPPVMISLPIKVLLFVLVDGWH  236
            F +SEL  AF IGFLLY+ F++ID+VVA+ L++MG+  + P  +++P+K+LLFV +DGW 
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  237  LLVGSLVKSF  246
            +L+ +LV S+
Sbjct  216  MLIHGLVLSY  225

360) W5S_1792 in NC_017845


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (417),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 136/199 (69%), Gaps = 7/199 (3%)

Query  32   LTFIPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVLNRVYE  91
            L ++P A +++TS+T+I++VL+LLRNA+G    PPN VL G++L+++ FVM+PV    + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  92   --EAYLPFSQDQISMEVAIERGAEPVREFMLRQTRETDLALFTRLAEI--PEIQGP--EA  145
              + Y + + D+  + V ++   EP R+F+L++T E + A+F R A+   P  ++    +
Sbjct  88   AAQNYGA-GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  146  VPMRVLLPAFVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLM  205
              + +L PAF  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  206  LFVLVDGWQLLLGSLAQSF  224
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

361) fliP in NC_013421


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 136/199 (69%), Gaps = 7/199 (3%)

Query  64   LTFIPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVLNRVYE  123
            L ++P A +++TS+T+I++VL+LLRNA+G    PPN VL G++L+++ FVM+PV    + 
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  124  --EAYLPFSQDQISMEVAIERGAEPVREFMLRQTRETDLALFTRLAEI--PEIQGP--EA  177
              + Y + + D+  + V ++   EP R+F+L++T E + A+F R A+   P  ++    +
Sbjct  88   AAQNYGA-GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  178  VPMRVLLPAFVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLM  237
              + +L PAF  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  238  LFVLVDGWQLLLGSLAQSF  256
            LFV +DGW +L+ +L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

362) fliP in NC_010334


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 92/209 (45%), Positives = 143/209 (69%), Gaps = 11/209 (5%)

Query  41   EILALMTVLSFLPALLMMLTSFTRIIVVLAILRQALGLQQSPPNKVLIGIALVMTIFIMR  100
             +L ++ +L++LP   M++TS+T+I+VVL++LR+A+G+QQ PPN VL G+AL+++ F+M 
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  101  PVGQEIYDDAFLPYDMGQIELPEAV--ARGEVPLRQFMLAQTRETDLEQMLKIA------  152
            PVG E +  A   Y+ G  +    V       P+RQF+L +T E +    ++ A      
Sbjct  80   PVGMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPK  138

Query  153  DEPITLTADEIPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDlvvasvlmsmgmmmlsp  212
            D + TL +D++  ++L PAF LSEL  AF+IGFLL+L F+VIDLVVA+ LM+MG+  ++P
Sbjct  139  DKATTLKSDDL--LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTP  196

Query  213  liislpFKLMVFVLVDGWSMTVSTLVASY  241
              +++PFKL++FV +DGWSM +  LV SY
Sbjct  197  TNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

363) hrcR in NC_004547


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (414),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 85/201 (43%), Positives = 135/201 (68%), Gaps = 5/201 (2%)

Query  18   LSLIPLMMIVCTCFLKIAIVLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVFQDISK  77
            L+L+P+  +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + FVMAPV  +  K
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  78   RVQE--KPLDMTDITSLQASVTYGLEPLQTFMSRNVDPDILTHLHENSLQMWPASLSEKV  135
              Q+     D + I  L  +     EP++ F+ ++      + +  ++ Q+WP   +  +
Sbjct  88   AAQNYGAGSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTL  144

Query  136  NTQNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTlslplk  195
            ++++LL++ PAF LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+K
Sbjct  145  KSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  196  lllfvlVNGWTRLLDGLFYSY  216
            LLLFV ++GW+ L++GL  SY
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

364) fliP in NC_021290


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 138/200 (69%), Gaps = 10/200 (5%)

Query  62   LSFLPAMVIMMTSFTRIIIVLGILRQAIGLQQSPSNQVLIGIALFMSFFIMSPV-LDRIN  120
            L++LP   +++TS+T+I++VLG+LR+AIG+QQ P+N VL G+AL++S F+M+PV ++ ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  121  NEALQPYLAETIQAKEA--LEKAELPIHQFMLAQTRIKDLNTFMEIANVQVDKPADVPLR  178
                Q Y A + +++    L+    P++QF+L +T  ++   FM  A+    K     L+
Sbjct  88   AA--QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLK  145

Query  179  -----VLIPAFVTSELKTAFQIGFMLFLPFLVIDLVVAsilmamgmmmlspmlvslPFKL  233
                 +L PAF  SEL  AF+IGF+L+L F+VIDLVVA+ LMAMG+  ++P  V++PFKL
Sbjct  146  SDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKL  205

Query  234  MLFVMVDGWNLILGSLANSF  253
            +LFV +DGW++++ +L  S+
Sbjct  206  LLFVAMDGWSMLIHGLVLSY  225

365) N646_1343 in NC_022349


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (416),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 143/208 (69%), Gaps = 12/208 (5%)

Query  89   ILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFVMSP  148
            +L ++ MLG+LP   +++TS+T+IVVV+++LR+A+G+QQ P+N V+ G+AL+++ FVM+P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  149  VLNEIND-KAVQPYLNEQVTAREA--FDAAQAPMKAFMLKQTRIKDLETFVTMSGEQVEN  205
            V   ++  KA Q Y      +R    +DA + P + F+LK+T  ++  +F   S++Q+  
Sbjct  81   V--GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPERE-KAFFMRSAQQIWP  137

Query  206  PEDVS------MAVLIPAFITSELKTAFQIGFMLFLPFLIIDlvvasvlmamgmmmlspm  259
             +  +      + +L PAF  SEL  AF+IGF+L+L F++IDLVVA+ LMAMG+  ++P 
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  260  IVSLPFKLMLFVLVDGWNLILSTLAGSF  287
             V++PFKL+LFV +DGW++++  L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

366) VEA_002825 in NC_013456


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  114 bits (415),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 143/208 (69%), Gaps = 12/208 (5%)

Query  89   ILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFVMSP  148
            +L ++ MLG+LP   +++TS+T+IVVV+++LR+A+G+QQ P+N V+ G+AL+++ FVM+P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  149  VLNEIND-KAVQPYLNEQVTAREA--FDAAQAPMKAFMLKQTRIKDLETFVTMSGEQVEN  205
            V   ++  KA Q Y      +R    +DA + P + F+LK+T  ++  +F   S++Q+  
Sbjct  81   V--GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPERE-KAFFMRSAQQIWP  137

Query  206  PEDVS------MAVLIPAFITSELKTAFQIGFMLFLPFLIIDlvvasvlmamgmmmlspm  259
             +  +      + +L PAF  SEL  AF+IGF+L+L F++IDLVVA+ LMAMG+  ++P 
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  260  IVSLPFKLMLFVLVDGWNLILSTLAGSF  287
             V++PFKL+LFV +DGW++++  L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

367) swp_5086 in NC_011566


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  113 bits (410),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 90/209 (44%), Positives = 145/209 (70%), Gaps = 11/209 (5%)

Query  41   EILALMTVLSFLPALLMMLTSFTRIIVVLAILRQALGLQQSPPNKVLIGIALVMTIFIMR  100
             +L ++ +L++LP   M++TS+T+I+VVL++LR+A+G+QQ PPN VL G+AL+++ F+M 
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  101  PVGQAIYDEAFLPYDLGQIELTEAVVKAEV--PLRKFMLAQTRETDLEQMLKIADE----  154
            PVG   +  A   Y+ G  +    V+      P+R+F+L +T E +    ++ A++    
Sbjct  80   PVGMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPK  138

Query  155  --PTTLTADEIPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDlvvasvlmsmgmmmlsp  212
              +TTL +D++  ++L PAF LSEL  AF+IGFLL+L F+VIDLVVA+ LM+MG+  ++P
Sbjct  139  DKATTLKSDDL--LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTP  196

Query  213  liislpFKLMVFVLVDGWSMTVSTLVASY  241
              +++PFKL++FV +DGWSM +  LV SY
Sbjct  197  TNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

368) PCC21_026900 in NC_018525


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  113 bits (410),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 131/191 (69%), Gaps = 7/191 (3%)

Query  72   LMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVLNRVYD--EAYLPF  129
            +++TS+T+I++VL+LLRNA+G    PPN VL G++L+++ FVM+PV    +   + Y + 
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGA-  94

Query  130  SQDQISMEVAIERGAEPVREFMLRQTRETDLALFTRLAEI--PEIQGP--EAVPMRVLLP  185
            + D+  + V ++   EP R+F+L++T E + A+F R A+   P  ++    +  + +L P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  186  AFVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGW  245
            AF  SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+LFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  246  QLLLGSLAQSF  256
             +L+ +L  S+
Sbjct  215  SMLIHGLVLSY  225

369) Ser39006_2919 in NC_022268


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  113 bits (410),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 82/203 (41%), Positives = 139/203 (69%), Gaps = 9/203 (4%)

Query  18   LSLIPMMMIVCTCFLKIAMVLIITRNAIGVQQVPPNMALYGIALASTLFIMAPV----FN  73
            L+L+P   +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + F+MAPV    F+
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  74   DIRQQFQDTPLDLNSIETLETTLGSGITPLQKFMSRNSDPDILVHLHENSIRMWPASMSE  133
               Q++   + D + I  L   L++   P+++F+ +++       +  ++ ++WP   + 
Sbjct  88   AA-QNYGAGS-DNSRIVVL---LDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKAT  142

Query  134  KVNTQNILLVIPAFVLSELQAGFKIGFLVYIPFIVIDLIVSNVLLALGMQMVAPTTlslp  193
             ++++++L++ PAF LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+PT +++P
Sbjct  143  TLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIP  202

Query  194  lklllfilVNGWTRLLDGLFYSY  216
            +KLLLF+ ++GW+ L++GL  SY
Sbjct  203  FKLLLFVAMDGWSMLIHGLVLSY  225

370) B565_1109 in NC_015424


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  113 bits (413),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 86/201 (43%), Positives = 140/201 (70%), Gaps = 12/201 (5%)

Query  61   LSFLPAMVIMMTSFTRIIVVLGILRQAIGLQQSPSNQVLIGIALFMSFFIMSPV-LDRIN  119
            L++LP   +++TS+T+I+VVLG+LR+AIG+QQ P+N VL G+AL++S F+M+PV ++ ++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  120  DEALQPYLAETIQAKEA--LERAELPIHQFMLAQTRIKDLNTFMEIANVQV-EKPADVPL  176
                Q Y A + +++    L+    P++QF+L +T  ++   FM  A+ Q+  K     L
Sbjct  88   AA--QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQ-QIWPKDKATTL  144

Query  177  R-----VLIPAFVTSELKTAFQIGFMLFLPFLVIDLVVasilmamgmmmlspmiVSLPFK  231
            +     +L PAF  SEL  AF+IGF+L+L F+VIDLVVA+ LMAMG+  ++P  V++PFK
Sbjct  145  KSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  232  LMLFVMVDGWNLILGSLANSF  252
            L+LFV +DGW++++ +L  S+
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

371) PC1_2212 in NC_012917


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  113 bits (413),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 85/201 (43%), Positives = 135/201 (68%), Gaps = 5/201 (2%)

Query  18   LSLIPLMMIVCTCFLKIAIVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFQDISK  77
            L+L+P+  +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + FVMAPV  +  K
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  78   RVQE--KPLDMTDITSLQASVTYGLEPLQTFMSRNVDPDILTHLHENSLQMWPASLSEKV  135
              Q+     D + I  L  +     EP++ F+ ++      + +  ++ Q+WP   +  +
Sbjct  88   AAQNYGAGSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTL  144

Query  136  NTQNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTlslplk  195
            ++++LL++ PAF LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+K
Sbjct  145  KSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  196  lllfvlVNGWTRLLDGLFYSY  216
            LLLFV ++GW+ L++GL  SY
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

372) PCC21_022910 in NC_018525


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  113 bits (413),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 85/201 (43%), Positives = 135/201 (68%), Gaps = 5/201 (2%)

Query  18   LSLIPLMMIVCTCFLKIAIVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFQDISK  77
            L+L+P+  +V T + KI +VL + RNAIGVQQVPPNM L G+AL  + FVMAPV  +  K
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  78   RVQE--KPLDMTDITSLQASVTYGLEPLQTFMSRNVDPDILTHLHENSLQMWPASLSEKV  135
              Q+     D + I  L  +     EP++ F+ ++      + +  ++ Q+WP   +  +
Sbjct  88   AAQNYGAGSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTL  144

Query  136  NTQNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTlslplk  195
            ++++LL++ PAF LSEL  +F+IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+K
Sbjct  145  KSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  196  lllfvlVNGWTRLLDGLFYSY  216
            LLLFV ++GW+ L++GL  SY
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

373) fliP in NC_021505


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  113 bits (411),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 139/208 (67%), Gaps = 17/208 (8%)

Query  9    SLLPFLIAAGTCYIKFSIVFVIVRNALGLQQVPSNMTLNAVALLLAMFVMSPVVQQGY--  66
            +LLPF     T Y K+ +V+ ++RNA+G+QQVP+NM LN+VALL++ FVM+PV  +++  
Sbjct  29   GLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKA  88

Query  67   -DYYKENRVEFTRIDAVVDFLDNGLGGYREYLARYTDPDLAQFFERA--QI-AREDPRAV  122
             + Y     + +RI   V +LD     +R++L + T      FF R+  QI +++ + ++
Sbjct  89   AQNYGAGS-DNSRI---VVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTL  144

Query  123  NSEFDERLEPSLFALLPAYALSEIKAAFKIGFYLYLPFvivdlvvssillalGMMMMSPV  182
            +S+        L+ L PA++LSE+  AF+IGF LYL F+++DLVV++ L+A+G+  ++P 
Sbjct  145  KSD-------DLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  183  IISVPIKLVLFVALDGWSLLSTGLVGQY  210
             +++P+KL+LFVA+DGWS+L  GLV  Y
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

374) fliP in NC_013949


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  112 bits (408),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 78/190 (42%), Positives = 130/190 (69%), Gaps = 7/190 (3%)

Query  64   MTSFTRLVIVFSFLRTALGTQQSPPTQILVSLAMVLTFFIMEPVVRESYQKAIVPYLDAK  123
            +TS+T++V+V+++LR A+G QQ PP  +L ++A++++ F+M PV  E++ KA   Y  + 
Sbjct  38   VTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAF-KAAQNYGAGS  96

Query  124  ISYETA--FDRGVQPFKDFMLKNTREKDLALFYR----IRKLENPKTSADVSLTTLIPAF  177
             +      +D   +PF++F+LK+T E++ A+F R    I+  +++ T     L  L PAF
Sbjct  97   DNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAF  156

Query  178  MISELKTAFQIGFLLYLPFLVIDMVvssilmamgmmmlppvmiSLPFKILIFVLVDGFNL  237
             +SEL  AF+IGFLLYL F+VID+VV++ LMAMG+  + P  +++PFK+L+FV +DG ++
Sbjct  157  TLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSM  216

Query  238  LIGNLVESFK  247
            LI  LV S++
Sbjct  217  LIHGLVLSYR  226

375) fliP in NC_004459


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  112 bits (407),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 140/206 (68%), Gaps = 8/206 (3%)

Query  89   ILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFIMSP  148
            +L ++ MLG+LP   +++TS+T+IVVV+++LR+A+G+QQ P+N V+ G+AL+++ F+M+P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  149  VINEVNEQAVQPYLNEQLTAREA--FDAAQGPMKAFMLKQTRVKDLETFVNMSG-----E  201
            V  E   +A Q Y      +R    +DA + P + F+LK+T  ++   F+  +      +
Sbjct  81   VGMEAF-KAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  202  QATNPEDVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDlvvasvlmamgmmmlspmIV  261
            +AT      + +L PAF  SEL  AF+IGF+L+L F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  262  SLPFKLMLFVLVDGWNLILSTLAGSF  287
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

376) VVMO6_00828 in NC_014965


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  112 bits (407),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 140/206 (68%), Gaps = 8/206 (3%)

Query  89   ILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFIMSP  148
            +L ++ MLG+LP   +++TS+T+IVVV+++LR+A+G+QQ P+N V+ G+AL+++ F+M+P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  149  VINEVNEQAVQPYLNEQLTAREA--FDAAQGPMKAFMLKQTRVKDLETFVNMSG-----E  201
            V  E   +A Q Y      +R    +DA + P + F+LK+T  ++   F+  +      +
Sbjct  81   VGMEAF-KAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  202  QATNPEDVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDlvvasvlmamgmmmlspmIV  261
            +AT      + +L PAF  SEL  AF+IGF+L+L F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  262  SLPFKLMLFVLVDGWNLILSTLAGSF  287
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

377) fliP in NC_005139


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  112 bits (407),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 140/206 (68%), Gaps = 8/206 (3%)

Query  89   ILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFIMSP  148
            +L ++ MLG+LP   +++TS+T+IVVV+++LR+A+G+QQ P+N V+ G+AL+++ F+M+P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  149  VINEVNEQAVQPYLNEQLTAREA--FDAAQGPMKAFMLKQTRVKDLETFVNMSG-----E  201
            V  E   +A Q Y      +R    +DA + P + F+LK+T  ++   F+  +      +
Sbjct  81   VGMEAF-KAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  202  QATNPEDVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDlvvasvlmamgmmmlspmIV  261
            +AT      + +L PAF  SEL  AF+IGF+L+L F++IDLVVA+ LMAMG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  262  SLPFKLMLFVLVDGWNLILSTLAGSF  287
            ++PFKL+LFV +DGW++++  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

378) fliP in NC_007954


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  111 bits (405),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 86/201 (43%), Positives = 139/201 (70%), Gaps = 11/201 (5%)

Query  50   LSFLPAMLMMLTSFTRIVVVLAILRQALGLQQSPPNKVLIGIALVLTLFIMRPVGDSIYK  109
            L++LP   M++TS+T+IVVVL++LR+A+G+QQ PPN VL G+AL+++ F+M PVG   +K
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  110  EAYLPYDQGKIE--LMAAIDIAKVPLSQFMLAQTRETDLEQMLKIANE------PIDLTP  161
             A   Y+ G  +  ++  +D  + P+ QF+L +T E +    ++ A++      +  L +
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  162  AEIPFLVLMPAFVLSELKTAFQIGFLLFLPFLVIDlvvasvlmsmgmmmlspliislpFK  221
             ++  L+L PAF LSEL  AF+IGFLL+L F+VIDLVVA+ LM+MG+  ++P  +++PFK
Sbjct  147  DDL--LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  222  LMIFVLVDGWAMTVSTLTASF  242
            L++FV +DGW+M +  L  S+
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

379) fliP in NC_021191


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  111 bits (404),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 88/209 (43%), Positives = 146/209 (70%), Gaps = 10/209 (4%)

Query  74   LVIVLGLTLLSVAPAVLLLCTCFTKVFMVLGITRNAMGLTSMPPNQVLAGLALFISLFIM  133
            L++V+ L LL+ A+ V+   T +TK+ +VLG+ RNA+G+  +PPN VL G+AL++S F+M
Sbjct  22   LLVVIMLGLLPFAAMVV---TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVM  78

Query  134  APVLSQVNEQGVQPYLAG-DKTQSQAFKDGV-QPLRDFMAKSTREDELQLLIRVSGQ---  188
            APV +    ++ Q Y AG D+++   + D+  +P+R+F+ K T E E  +++R + Q   
Sbjct  79   APV-GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWP  137

Query  189  -QKPANISDVELTTLVPAFVLSELRAAFIIGFVIFIPFLIIDmvvsaslmslgmmmlppv  247
             +K++ +   +L  L PAF LSEL  AF IGF++++ F++ID+VV+ +LM++G+  + P 
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  248  TVAMPFKLLLFVLVNGWGLIITALVGSYR  276
             VA+PFKLLLFV ++GW+++I +LV SYR
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

380) fliP in NC_018691


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  111 bits (403),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 125/188 (67%), Gaps = 11/188 (5%)

Query  71   FTRIIIVFSLLRTAMGTQSAPPNQVllgltlfltffIMSPVLNRVYQEAWV-PLSNDEMG  129
            +T+I++V++LLR A+G Q  PPN VL G++L+++ F+M+PV    ++ A     ++D+  
Sbjct  41   YTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGSDNSR  100

Query  130  FEQALSVGSEPFREFMMAQTREPDLALFARLA-------KTENLNGPEDVPLRVLLPAFV  182
            +   L    EPFR+F++ +T E + A+F R A       K+  L++ +   L +L PAF 
Sbjct  101  IVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDD---LLILAPAFT  157

Query  183  TSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLL  242
             SEL  AF+IGF +++ F++IDLVVA+ LMA+G+  V P+ +++PFKL+LFV +DGW +L
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  243  IGSLAQSF  250
            I +L  S+
Sbjct  218  IHGLVLSY  225

381) M892_15305 in NC_022269


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  111 bits (404),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 143/208 (69%), Gaps = 12/208 (5%)

Query  89   ILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFVMSP  148
            +L ++ MLG+LP   +++TS+T+IVVV+++LR+A+G+QQ P+N V+ G+AL+++ FVM+P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  149  VLNEIND-NAIQPYLNEQVTARQA--FDAAQVPMKAFMLKQTRIKDLETFVNMSGEQVTN  205
            V   ++  +A Q Y      +R    +DA + P + F+LK+T  ++  +F   S++Q+  
Sbjct  81   V--GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPERE-KAFFMRSAQQIWP  137

Query  206  PEDVS------MAVLIPAFITSELKTAFQIGFMLFLPFLIIDlvvasvlmamgmmmlspm  259
             +  +      + +L PAF  SEL  AF+IGF+L+L F++IDLVVA+ LMAMG+  ++P 
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  260  IVSLPFKLMLFVLVDGWNLILSTLAGSF  287
             V++PFKL+LFV +DGW++++  L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

382) fliP in NC_009783


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  111 bits (404),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 143/208 (69%), Gaps = 12/208 (5%)

Query  89   ILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFVMSP  148
            +L ++ MLG+LP   +++TS+T+IVVV+++LR+A+G+QQ P+N V+ G+AL+++ FVM+P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  149  VLNEIND-NAIQPYLNEQVTARQA--FDAAQVPMKAFMLKQTRIKDLETFVNMSGEQVTN  205
            V   ++  +A Q Y      +R    +DA + P + F+LK+T  ++  +F   S++Q+  
Sbjct  81   V--GMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPERE-KAFFMRSAQQIWP  137

Query  206  PEDVS------MAVLIPAFITSELKTAFQIGFMLFLPFLIIDlvvasvlmamgmmmlspm  259
             +  +      + +L PAF  SEL  AF+IGF+L+L F++IDLVVA+ LMAMG+  ++P 
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  260  IVSLPFKLMLFVLVDGWNLILSTLAGSF  287
             V++PFKL+LFV +DGW++++  L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

383) fliP in NC_010814


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  110 bits (399),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 78/193 (41%), Positives = 138/193 (72%), Gaps = 11/193 (5%)

Query  71   IMTTSFTRIVVVLSFLRTALGTQQAPSNQIILALSLFLTFFIMTPVWQQVNRDAYQPYKA  130
            ++ TS+T+IVVVL++LR A+G QQ P+N ++ +++L+++ F+M+PV  +  + A Q Y A
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  131  GTLSQEQA--FEKAVQPVRKFMLSQTREKDLGLFVSLSKQARPKN------ADDIPTLTI  182
            G+ +      ++   +P R+F+L +T E++ ++F+  ++Q +PK+      +DD+  L +
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDL--LIL  152

Query  183  VPAFMISELRTAFQIGFLIYIPFIVVDmvvasvlmsmgmmmlppvmISLPFKILLFVLVD  242
             PAF +SEL  AF+IGFL+Y+ FIV+D+VVA+ LM+MG+  + P  +++PFK+LLFV +D
Sbjct  153  APAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMD  212

Query  243  GWGLVISSLVKSF  255
            GW+++I +LV S+
Sbjct  213  GWSMLIHGLVLSY  225

384) fliP in NC_003030


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  110 bits (401),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 83/191 (44%), Positives = 130/191 (69%), Gaps = 7/191 (3%)

Query  75   MMMTSFTRIIVVLGFLRTSMGTQQSPPNQVLIGLALFLTMFIMMPTYKQINKNAIQPY-L  133
            M++TS+T+I+VVLG+LR ++G QQ PPN VL G+AL+++ F+M P   +  K A Q Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  134  NKSISQQQALLEMEK-PLRTFMYKQTYQKDLKLFIDLDNQ-SGKITKDTVPFHDIV---P  188
                S+   LL+  + P+R F+ K+T +++  +F+   +Q   K    T+  +D++   P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  189  AFIISELKTAFTIGFLLYIPFLIIDLVVASIlmsmgmmmlppvmvsmPFKLLLFIMVDGW  248
            AF +SEL  AF IGFLLY+ F++IDLVVA+ LM+MG+  + P  V++PFKLLLF+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  249  YLIVKSLVLSF  259
             +++ +LVLS+
Sbjct  215  SMLIHGLVLSY  225

385) fliP in NC_015687


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  110 bits (401),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 83/191 (44%), Positives = 130/191 (69%), Gaps = 7/191 (3%)

Query  75   MMMTSFTRIIVVLGFLRTSMGTQQSPPNQVLIGLALFLTMFIMMPTYKQINKNAIQPY-L  133
            M++TS+T+I+VVLG+LR ++G QQ PPN VL G+AL+++ F+M P   +  K A Q Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  134  NKSISQQQALLEMEK-PLRTFMYKQTYQKDLKLFIDLDNQ-SGKITKDTVPFHDIV---P  188
                S+   LL+  + P+R F+ K+T +++  +F+   +Q   K    T+  +D++   P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  189  AFIISELKTAFTIGFLLYIPFLIIDLVVASIlmsmgmmmlppvmvsmPFKLLLFIMVDGW  248
            AF +SEL  AF IGFLLY+ F++IDLVVA+ LM+MG+  + P  V++PFKLLLF+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  249  YLIVKSLVLSF  259
             +++ +LVLS+
Sbjct  215  SMLIHGLVLSY  225

386) fliP in NC_017295


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  110 bits (401),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 83/191 (44%), Positives = 130/191 (69%), Gaps = 7/191 (3%)

Query  75   MMMTSFTRIIVVLGFLRTSMGTQQSPPNQVLIGLALFLTMFIMMPTYKQINKNAIQPY-L  133
            M++TS+T+I+VVLG+LR ++G QQ PPN VL G+AL+++ F+M P   +  K A Q Y  
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGA  94

Query  134  NKSISQQQALLEMEK-PLRTFMYKQTYQKDLKLFIDLDNQ-SGKITKDTVPFHDIV---P  188
                S+   LL+  + P+R F+ K+T +++  +F+   +Q   K    T+  +D++   P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  189  AFIISELKTAFTIGFLLYIPFLIIDLVVASIlmsmgmmmlppvmvsmPFKLLLFIMVDGW  248
            AF +SEL  AF IGFLLY+ F++IDLVVA+ LM+MG+  + P  V++PFKLLLF+ +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  249  YLIVKSLVLSF  259
             +++ +LVLS+
Sbjct  215  SMLIHGLVLSY  225

387) fliP in NC_007298


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  110 bits (401),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 88/207 (43%), Positives = 142/207 (69%), Gaps = 9/207 (4%)

Query  48   LLLMTALTFIPAIVLMMTGFTRIVIVLSLLRHALGTQTAPPNQVVVGLSLFLTFFVMSPV  107
            LL++  L ++P   +++T++T+IV+VL+LLR+A+G Q  PPN V+ G++L+++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  108  LEKVY--TDAYVPLSEN-KINIMQAGERAAIPMRSFMLKQTRESDLALFAGIAK----ID  160
                +  ++ Y + S+N +I ++  + R   P R F+LK+T E + A+F   A+     D
Sbjct  82   GMEAFKAAQNYGAGSDNSRIVVLLDACRE--PFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  161  KIETPEDTPLRILVPAFVISELKTAFQIGFILFIPFLVIDmvvasllmsmgmmmmspvmv  220
            K  T     L IL PAF +SEL  AF+IGF+L++ F+VID+VVA+ LM+MG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  221  alpFKLMLFVLVDGWHLVIGSLVQSFS  247
            A+PFKL+LFV +DGW ++I +LV S+ 
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSYR  226

388) Celf_0690 in NC_015514


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 141/206 (69%), Gaps = 7/206 (3%)

Query  37   VLLAITLLSVAPALILMTTSFTKIFVVLSFTRNALGLQGVPPNQVLAGLALFLSLFVMAP  96
            +LL + +L++ P   ++ TS+TKI VVL++ RNA+G+Q VPPN VL G+AL++S FVMAP
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  97   VVSDINSVGVQPYLDGSLTFSQAV--DVGSGPLREFMLGQTREQDLALLTRAADQ----E  150
            V  +    + Q Y  GS      V  D    P+R+F+L +T E++ A++ R+A+Q    +
Sbjct  81   VGMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  151  NPASPEDVPFATLVPAFLLSELRSAFIMGFVIFVPFLVIDlvvsaslmsmgmmmlppvmI  210
            ++++     +  L PAF LSEL  AF +GF++++ F+VIDLVV+ +LM+MG+  + P  +
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  211  SLPFKILLFVLVDGWGLVVTSLVGSY  236
            ++PFK+LLFV +DGW++++ +LV SY
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

389) fliP in NC_006370


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  109 bits (396),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 84/201 (42%), Positives = 137/201 (69%), Gaps = 12/201 (5%)

Query  91   LGFLPAIIILMTSFTRIVVVLSILRQAMGLQQTPSNQVIIGIALFLTLFVMSPVIDKVNA  150
            LG+LP   +++TS+T+IVVVL++LR+A+G+QQ P+N V+ G+AL+++ FVM+PV +    
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV-GMEAF  86

Query  151  DAVQPYI--NEEITAAQAFETAQVPLRQFMLKQTRVKDLESFVNMSGSTATAPEDVPIT-  207
             A Q Y   +++      +++ + P+RQF+LK+T  ++   F  M ++    P D + T 
Sbjct  87   KAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFF--MRSAQQIWPKDKATTL  144

Query  208  ------VLIPAFITSELKTAFQIGFMLFLPFLIIDlvvasvlmamgmmmlspmIVSLPFK  261
                  +L PAF  SEL  AF+IGF+L+L F++IDLVVA+ LMAMG+  ++P  V++PFK
Sbjct  145  KSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  262  LMLFVLVDGWNLILSTLAGSF  282
            L+LFV +DGW++++  L  S+
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

390) fliP in NC_018649


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  109 bits (397),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 78/193 (41%), Positives = 133/193 (69%), Gaps = 8/193 (4%)

Query  79   VMMTSFTRIVVVLSFLRQAMGTAQVPPNQVLVGLSLFLTFFVMAPVWKTMDE-TAITPYL  137
            +++TS+T+IVVVL++LR+A+G  QVPPN VL G++L+++ FVMAPV   M+   A   Y 
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAAQNYG  93

Query  138  DKKIAPDVAV--DRAMKPVRAFMFRQVRQKDIALFVRIAHLPRTPSSPDDIPT---YVLI  192
                 + + V  D    P R F++++  +++ A+F+R A+  +    +  + +    +L 
Sbjct  94   AGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILA  153

Query  193  PAFVVSELSTAFEMGFLIYLPFLIldmvvssvlmsmgmmmlPPTVVSLPFKILLFVLVDG  252
            PAF +SEL+ AF +GFL+YL F+++D+VV++ LM+MG+  + PT V++PFK+LLFV +DG
Sbjct  154  PAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDG  213

Query  253  WSLVVGSLVRSFH  265
            WS+++ +LV S++
Sbjct  214  WSMLIHGLVLSYR  226

391) fliP in NC_014034


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 87/211 (42%), Positives = 140/211 (67%), Gaps = 8/211 (3%)

Query  35   SSLILIAGITLLSLAPGLAIMVTCFPFIVTVLSILRQAMGLQQSPPNMLIISLALFLTWF  94
            +SL+L+  + +L+L P  A++VT +  IV VL++LR+A+G+QQ PPNM++ ++AL+++ F
Sbjct  19   GSLLLV--VIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCF  76

Query  95   VMEPTFMASYQAGIE-PLIAQKIDIVTAFERGVEPFRIFMAGRT-DPET--FTQLAA-IR  149
            VM P  M +++A+ +    +++  IV  ++   EPFR F+  +T + E   F + A  I+
Sbjct  77   VMAPVGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIW  136

Query  150  EGATYTGTAREAPLSILVPSFMLSEITRAFEIGFLVFLPFLIIDLVVSAILMSMGmmmvp  209
                 + T +   L IL P+F LSE+T AF IGFL++L F++IDLVV+  LM+MG+  V 
Sbjct  137  PKDK-ATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVT  195

Query  210  pavvaLPFKLAFFVVANGWVLLSGALVRSYS  240
            P+ VA+PFKL +FV  +GW +L  +LV SY 
Sbjct  196  PTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

392) Sbal175_0426 in NC_017571


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 136/199 (69%), Gaps = 6/199 (3%)

Query  50   ISFLPIMLMMLTSFTRIIIVLAILRQALGLQQSPPNRVLVGIALILTIFIMRPVGDKIYK  109
            +++LP+  M++TS+T+I++VL++LR+A+G+QQ PPN VL G+AL+++ F+M PVG   +K
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  110  EAYLPYDQGKIELMEAV--SIAKVPLTRFMLAQTRATDLEQMLKIANE--PTHMKTA-EE  164
             A   Y+ G  +    V     + P+ +F+L +T   +    ++ A++  P +  T+   
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  165  VPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDlvvasvlmsmgmmmlspliislpFKLM  224
              +++L PAF LSEL  AF+IGFLL+L F+VIDLVVA+ LM+MG+  ++P  +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  225  VFVLVDGWSMTVSTLTASF  243
            +FV +DGWSM +  L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

393) Sbal117_4142 in NC_017579


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 136/199 (69%), Gaps = 6/199 (3%)

Query  50   ISFLPIMLMMLTSFTRIIIVLAILRQALGLQQSPPNRVLVGIALILTIFIMRPVGDKIYK  109
            +++LP+  M++TS+T+I++VL++LR+A+G+QQ PPN VL G+AL+++ F+M PVG   +K
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  110  EAYLPYDQGKIELMEAV--SIAKVPLTRFMLAQTRATDLEQMLKIANE--PTHMKTA-EE  164
             A   Y+ G  +    V     + P+ +F+L +T   +    ++ A++  P +  T+   
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  165  VPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDlvvasvlmsmgmmmlspliislpFKLM  224
              +++L PAF LSEL  AF+IGFLL+L F+VIDLVVA+ LM+MG+  ++P  +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  225  VFVLVDGWSMTVSTLTASF  243
            +FV +DGWSM +  L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

394) fliP in NC_009052


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 136/199 (69%), Gaps = 6/199 (3%)

Query  50   ISFLPIMLMMLTSFTRIIIVLAILRQALGLQQSPPNRVLVGIALILTIFIMRPVGDKIYK  109
            +++LP+  M++TS+T+I++VL++LR+A+G+QQ PPN VL G+AL+++ F+M PVG   +K
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  110  EAYLPYDQGKIELMEAV--SIAKVPLTRFMLAQTRATDLEQMLKIANE--PTHMKTA-EE  164
             A   Y+ G  +    V     + P+ +F+L +T   +    ++ A++  P +  T+   
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  165  VPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDlvvasvlmsmgmmmlspliislpFKLM  224
              +++L PAF LSEL  AF+IGFLL+L F+VIDLVVA+ LM+MG+  ++P  +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  225  VFVLVDGWSMTVSTLTASF  243
            +FV +DGWSM +  L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

395) fliP in NC_009438


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 138/199 (70%), Gaps = 6/199 (3%)

Query  50   ISFLPVMLMMLTSFTRIIIVLAILRQALGLQQSPPNRVLVGIALILTIFIMRPVGDKIYK  109
            +++LP   M++TS+T+I++VL++LR+A+G+QQ PPN VL G+AL+++ F+M PVG   +K
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  110  EAYLPYDQGKIE--LMEAISIAKVPLTRFMLAQTRETDLEQMLKIANE--PTHMKTA-EE  164
             A   Y+ G  +  ++  +   + P+ +F+L +T E +    ++ A++  P +  T+   
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  165  VPFFVLMPAFVLSELKTAFQIGFLIFLPFLVIDlvvasvlmsmgmmmlspliislpFKLM  224
              +++L PAF LSEL  AF+IGFL++L F+VIDLVVA+ LM+MG+  ++P  +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  225  IFVLVDGWAMTVSTLTASF  243
            +FV +DGW+M +  L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

396) fliP in NC_008750


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 138/199 (70%), Gaps = 6/199 (3%)

Query  50   ISFLPVMLMMLTSFTRIIIVLAILRQALGLQQSPPNRVLVGIALILTIFIMRPVGDKIYK  109
            +++LP   M++TS+T+I++VL++LR+A+G+QQ PPN VL G+AL+++ F+M PVG   +K
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  110  EAYLPYDQGKIE--LMEAISIAKVPLTRFMLAQTRETDLEQMLKIANE--PTHMKTA-EE  164
             A   Y+ G  +  ++  +   + P+ +F+L +T E +    ++ A++  P +  T+   
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  165  VPFFVLMPAFVLSELKTAFQIGFLIFLPFLVIDlvvasvlmsmgmmmlspliislpFKLM  224
              +++L PAF LSEL  AF+IGFL++L F+VIDLVVA+ LM+MG+  ++P  +++PFKL+
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  225  IFVLVDGWAMTVSTLTASF  243
            +FV +DGW+M +  L  S+
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

397) fliP in NC_008390


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  107 bits (388),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 86/210 (41%), Positives = 146/210 (70%), Gaps = 17/210 (8%)

Query  54   MLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQALGTATTPPNQVLVGLAMFLTFFVMSPV  113
            +L++ ML++LP   +++TS+T+I++VL+LLR+A+G    PPN VL G+A++++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  114  LDRAY--ADGYKPFSDGS--MPMEQAVRRGVAPFKTFMLKQTRETDLALFAKIS------  163
               A+  A+ Y + SD S  + + +A R    PF+ F+LK+T E + A+F + +      
Sbjct  82   GMEAFKAAQNYGAGSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQIWPK  138

Query  164  -KAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvs  222
             KA+ +++ +   L +L PAF  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+
Sbjct  139  DKATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVT  195

Query  223  pstvsLPFKLMLFVLVDGWQLLIGSLAQSF  252
            P+ V++PFKL+LFV +DGW +LI +L  S+
Sbjct  196  PTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

398) fliP in NC_010551


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  107 bits (388),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 86/210 (41%), Positives = 146/210 (70%), Gaps = 17/210 (8%)

Query  54   MLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQALGTATTPPNQVLVGLAMFLTFFVMSPV  113
            +L++ ML++LP   +++TS+T+I++VL+LLR+A+G    PPN VL G+A++++ FVM+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  114  LDRAY--ADGYKPFSDGS--MPMEQAVRRGVAPFKTFMLKQTRETDLALFAKIS------  163
               A+  A+ Y + SD S  + + +A R    PF+ F+LK+T E + A+F + +      
Sbjct  82   GMEAFKAAQNYGAGSDNSRIVVLLDACR---EPFRQFLLKHTPEREKAFFMRSAQQIWPK  138

Query  164  -KAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvs  222
             KA+ +++ +   L +L PAF  SEL  +F+IGF +++ F++ID+VVA+ LM+MG+  V+
Sbjct  139  DKATTLKSDD---LLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVT  195

Query  223  pstvsLPFKLMLFVLVDGWQLLIGSLAQSF  252
            P+ V++PFKL+LFV +DGW +LI +L  S+
Sbjct  196  PTNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

399) fliP in NC_010524


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  107 bits (388),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 86/208 (42%), Positives = 136/208 (66%), Gaps = 13/208 (6%)

Query  62   LLFFTALSFLPAVLLMMTGFTRIVIVLGLLRQALGTQAAPPNQVIVGLSLFLTFFVMAPT  121
            LL    L++LP   +++T++T+IV+VLGLLR+A+G Q  PPN V+ G++L+++ FVMAP 
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP-  80

Query  122  LDRVYADAYKPYAANQIGFEEA-----IARGEVPMRQFMLKQTRQSDLALFARLAKL---  173
               V  +A+K+      G +++     +     P RQF+LK+T + + A+F R A+    
Sbjct  81   ---VGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWP  137

Query  174  -DPAVKSEQAPLRVLVPAFVTSELKSAFQIGFLIFIPFLVIDmvvasvlmslgmmmlspv  232
             D A       L +L PAF  SEL  AF+IGFL+++ F+VID+VVA+ LM++G+  ++P 
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  233  lvALPFKLMLFVLADGWNLLLGSLAASF  260
             VA+PFKL+LFV  DGW++L+ +L  S+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

400) fliP in NC_016745


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  106 bits (386),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 83/200 (42%), Positives = 134/200 (67%), Gaps = 10/200 (5%)

Query  53   LSFLPAVVIMMTSFTRIIVVLSILRQALGLQQSPSNQVLIGISLFLSFFIMAPV-LDRVN  111
            L++LP   +++TS+T+I+VVL++LR+A+G+QQ P+N VL G++L++S F+MAPV ++  +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  112  AEALQPYLAEEIGSREA--LARAELPIRDFMLAQTRVKDLDTFLNIANVQVDSEAEVPLR  169
            A   Q Y A    SR    L     P+R+F+L +T  ++   F+  A+     +    L+
Sbjct  88   AA--QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLK  145

Query  170  -----VLIPAFVTSELKTAFQIGFMLFLPFLVIDLVVasilmamgmmmlspmlislpFKL  224
                 +L PAF  SEL  AF+IGF+L+L F+VIDLVVA+ LMAMG+  ++P  +++PFKL
Sbjct  146  SDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKL  205

Query  225  MLFVLVDGWNLIMGTLATSF  244
            +LFV +DGW++++  L  S+
Sbjct  206  LLFVAMDGWSMLIHGLVLSY  225

401) fliP in NC_009831


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  106 bits (387),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 90/209 (44%), Positives = 143/209 (69%), Gaps = 11/209 (5%)

Query  41   EILALMTVLSFLPALLMMLTSFTRIIVVLAILRQALGLQQSPPNKVLLGIALVLTLFVMR  100
             +L ++ +L++LP   M++TS+T+I+VVL++LR+A+G+QQ PPN VL G+AL+++ FVM 
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  101  PVGQVMYDEAYLPYDQGLIELPEAVNIGVV--PLRKFMLAQTRETDL------EQMLKIA  152
            PVG   +  A   Y+ G  +    V ++    P+R+F+L +T E +        Q +   
Sbjct  80   PVGMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPK  138

Query  153  DEPVTLTADEIPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDlvvasvlmsmgmmmlsp  212
            D + TL +D++  ++L PAF LSEL  AF+IGFLL+L F+VIDLVVA+ LM+MG+  ++P
Sbjct  139  DKATTLKSDDL--LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTP  196

Query  213  liislpFKLMVFVLVDGWSMTVSTLVASF  241
              +++PFKL++FV +DGWSM +  LV S+
Sbjct  197  TNVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

402) Bcell_2487 in NC_014829


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 78/192 (41%), Positives = 134/192 (70%), Gaps = 9/192 (4%)

Query  38   ILMTCFTRIVVVLSFVRSGLATQQMPPNQVLVGLALFITFFIMAPVFSEVNEQALQPMFA  97
            +++T +T+IVVVL+++R++++ QQ+PPN VL G+AL+++ F+MAPV  E    A +  ++
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN--YG  93

Query  98   GEMTQEEA---FDAAALPMKEFMAQHTREKDLALFMGYAGLPRPE----TLDDIPLTALV  150
            +   +      +DA   P ++F+ +HT E++ A+FM  A   +P     TL    L  L 
Sbjct  94   AGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILA  153

Query  151  PAFAISELKTAFQIGFMIFIPFLVIDmvvasvlmsmgmmmlppvmIALPFKILLFVMVDG  210
            PAF++SEL  AF+IGF++++ F+VID+VVA+ LM+MG+  + P  +A+PFK+LLFV +DG
Sbjct  154  PAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDG  213

Query  211  WHLVVRSLLLSF  222
            W +++++L+LS+
Sbjct  214  WSMLIHGLVLSY  225

403) fliP in NC_017956


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  105 bits (381),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 128/193 (67%), Gaps = 10/193 (5%)

Query  69   VAVTSFTRIVVVLSLLRSALGVQQTPPNAVLIGLAMFLTGFVMTP----TFERAWTEGVA  124
            + VTS+T+IVVVL+LLR+A+GVQQ PPN VL G+A++++ FVM+P    +F  A   G +
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  125  PLVAEDITEEEAFDRISAPFRDFMTAHVGERELTAFVDMAAL---DPEPASVEDVPLQVL  181
               +++      +D    PFR+F+  H  ERE + F+  A        ++++    L +L
Sbjct  96   ---SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLIL  152

Query  182  VPAFMVSELRRAFEIGFLVFLPFLIIDmlvasllmsmgmmmlppvmISLPFKLIFFVLID  241
             PAF +SEL  AF IGFL++L F++ID++VA+ LM+MG+  + P  +++PFKL++FV +D
Sbjct  153  APAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMD  212

Query  242  GWSLIAGSLVRSF  254
            GWS++  +LV S+
Sbjct  213  GWSMLIHGLVLSY  225

404) fliP in NC_017955


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  105 bits (380),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 85/212 (41%), Positives = 140/212 (67%), Gaps = 7/212 (3%)

Query  82   SQAVTLILAITVLSIAPSALLLVTSFTKMLVVLSLTRNALGLASSPPNQVLTGIALFLTI  141
            ++  +L+L + +L++ P A ++VTS+TK++VVL+L RNA+G+   PPN VL G+AL+++ 
Sbjct  16   PDVGSLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSC  75

Query  142  FVMGPVFSDINEVAVQPYLDGTISASQA--YDVGEAPLKSFLLDNTRDDE----LKLMIG  195
            FVM+PV  +    A Q Y  G+ ++      D    P++ FLL +T + E    ++    
Sbjct  76   FVMAPVGMEAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQ  134

Query  196  LSGEEKPADEASVSMLTLIPAFVLSELKSAFIIGLVIFIPFLVLDmlvsaalmsmgmmmv  255
            +   +K++   S  +L L PAF LSEL  AF IG+++++ F+V+D++V+ ALM+MG+  V
Sbjct  135  IWPKDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQV  194

Query  256  ppsvvaLPFKLLLFVMVDGWALITTALVGSYS  287
             P+ VA+PFKLLLFV +DGW+++  +LV SY 
Sbjct  195  TPTNVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

405) fliP in NC_013194


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 145/206 (71%), Gaps = 9/206 (4%)

Query  50   LLTLTALTFIPAALLMMTSFTRIIIVLSLLRHALGTQTSPPNQVLLGLSLFLTFFIMSPV  109
            LL +  L ++P A +++TS+T+I++VL+LLR+A+G Q  PPN VL G++L+++ F+M+PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  110  LDTVY--TEAYLPLSEN-RITYLQAIERGAVPLRKFMLKQTREADIALFARMTNA--PRF  164
                +  ++ Y + S+N RI  L    R   P+R+F+LK+T E + A+F R ++   P+ 
Sbjct  82   GMEAFKAAQNYGAGSDNSRIVVLLDACRE--PFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  165  QSTDDIPMRLLI--PAFVTSELKTAFQIGFIIFIPFLIVDmvvasvlmsmgmmmmspvmv  222
            ++T   +  LLI  PAF  SEL  AF+IGF++++ F+++D+VVA+ LM+MG+  ++P  V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  223  alpFKLMLFVLVDGWHLLLGSLVASF  248
            A+PFKL+LFV +DGW +L+ +LV S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

406) HP15_2312 in NC_017506


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  103 bits (373),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 84/199 (43%), Positives = 135/199 (68%), Gaps = 8/199 (4%)

Query  65   LTFLPAMLMMMTSFTRIIVVFAILRQAIGLQSTPSNQILLGLALFLSIFIMKPVLEEANR  124
            L +LP   M++TS+T+I+VV+++LR+AIG+Q  P+N +L G+AL++S F+M PV  EA +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  125  VALQPYMQEEVTSLEAV--ELASQPFRKFMLEQTRESDLALFMRISD-----TQYETPQD  177
             A Q Y      S   V  +   +PFR+F+L +T E + A+FMR ++      +  T + 
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  178  VSFWILMPAFVTSELKTAfqigfilfipfliiDMVVASVLMAMGMMMLSPIIISLPFKIM  237
              + IL PAF  SEL  AF+IGF+L++ F++ID+VVA+ LMAMG+  ++P  +++PFK++
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  238  LFVLVDGWALIMGTLAASY  256
            LFV +DGW++++  L  SY
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

407) Achl_2976 in NC_011886


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  101 bits (366),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 84/205 (41%), Positives = 136/205 (67%), Gaps = 7/205 (3%)

Query  63   LIGITLLSVAPALLLMMTSFTKIFVVLAMTRNALSLPSIPPNQVLAGLALFLSLFVMWPV  122
            L+ + +L++ P   +++TS+TKI VVL++ RNA+++  +PPN VL G+AL++S FVM PV
Sbjct  22   LLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV  81

Query  123  LTEINTDAVQPYLNGNLDFNGA--FSAGAGPLQQFMLGHTREEDIALMTRAARMPNPENP  180
              E    A Q Y  G+ +      + A   P++QF+L HT E + A+  R+A+   P + 
Sbjct  82   GME-AFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  181  GAV----PLQTLIPAFMISELRAAFIIGFVIFIPFLVIDLVvsaalmsmgmmmlppvmIS  236
            ++      L  L PAF +SEL  AF IGF++++ F+VIDLVV+ ALM+MG+  + P  ++
Sbjct  141  ATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVA  200

Query  237  LPFKILLFILVDGWGLVITSLIQSY  261
            +PFK+LLF+ +DGW+++I +L+ SY
Sbjct  201  IPFKLLLFVAMDGWSMLIHGLVLSY  225

408) fliP in NC_008740


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  100 bits (361),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 135/199 (68%), Gaps = 8/199 (4%)

Query  60   LTFLPAMLMMMTSFTRIIVVFAILRQALGLQATPSNQILLGLALFLSIFIMKPVLEEANR  119
            L +LP   M++TS+T+I+VV+++LR+A+G+Q  P+N +L G+AL++S F+M PV  EA +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  120  VGLQPYLQEEVTSLEAV--ELASQPFRKFMLEQTREDDLALFMRIADV-----QYETPQD  172
             + Q Y      S   V  +   +PFR+F+L +T E + A+FMR A+      +  T + 
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  173  VSFWILMPAFVTSELKTAfqigfilfipfliiDMVVASVLMAMGMMMLSPIIISLPFKIM  232
              + IL PAF  SEL  AF+IGF+L++ F++ID+VVA+ LMAMG+  ++P  +++PFK++
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  233  LFVLVDGWALIMGTLAASY  251
            LFV +DGW++++  L  SY
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

409) fliP in NC_017067


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =  100 bits (361),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 135/199 (68%), Gaps = 8/199 (4%)

Query  60   LTFLPAMLMMMTSFTRIIVVFAILRQALGLQATPSNQILLGLALFLSIFIMKPVLEEANR  119
            L +LP   M++TS+T+I+VV+++LR+A+G+Q  P+N +L G+AL++S F+M PV  EA +
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  120  VGLQPYLQEEVTSLEAV--ELASQPFRKFMLEQTREDDLALFMRIADV-----QYETPQD  172
             + Q Y      S   V  +   +PFR+F+L +T E + A+FMR A+      +  T + 
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  173  VSFWILMPAFVTSELKTAfqigfilfipfliiDMVVASVLMAMGMMMLSPIIISLPFKIM  232
              + IL PAF  SEL  AF+IGF+L++ F++ID+VVA+ LMAMG+  ++P  +++PFK++
Sbjct  147  DDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLL  206

Query  233  LFVLVDGWALIMGTLAASY  251
            LFV +DGW++++  L  SY
Sbjct  207  LFVAMDGWSMLIHGLVLSY  225

410) PP1Y_AT34509 in NC_015580


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 84/201 (42%), Positives = 140/201 (70%), Gaps = 9/201 (4%)

Query  3    LLTILPSLILMMTSFTRILVVLAILRQALGLQQSPPNQVLIGLSLFLSLFVMAPTLERVN  62
            +L +LP   +++TS+T+I+VVL++LR+A+G+QQ PPN VL G++L++S FVMAP +    
Sbjct  27   MLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP-VGMEA  85

Query  63   ANAIAPYSAGTINAEQAI-ANGGKE-FHAFMIRQTRERDLTMFAEMANAPRFAKPADVPF  120
             +A   Y+AG+ N+   +  ++ +E F+ F++++T ER+ + F   A+  + +K     +
Sbjct  86   FKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIW-PKDKATTL  144

Query  121  S-----ILLPAFVTSELKTAFQIGFMLFLPFlvidlvvssvlmslgmmmmspmvvslPFK  175
                  IL PAF  SEL  AF+IGF+L+L F+VIDLVV++ LM++G+  ++P  V++PFK
Sbjct  145  KSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  176  LLLFVMVDGWALLMGSLASSF  196
            LLLFV +DGW++L+ +L  S+
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

411) fliP in NC_010520


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 99.1 bits (357),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 129/191 (68%), Gaps = 9/191 (4%)

Query  74   MMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINT-KAIQPYMK  132
            ++TS+ + +VV+G+LRNA+G QQ PPN V+ G+AL+++ F+M PV   +++ KA Q Y  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAAQNYGA  94

Query  133  NKITQEQAV--ETGAKPLRQFMLKQTRQKDLKLFVDLAKPNFKVTKDNA----PLYIVVP  186
                    V  ++   P+RQF+LK+T +++  +F+  A+      K  +     L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  187  AFIISELKTAfqigfllfipfliidlVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGW  246
            AF +SEL  AF+IGFLL++ F++IDLVVA+ LM+MG+  + P  +++PFKLLLFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  247  YLLVKSLVMSF  257
             +L+ +LV+S+
Sbjct  215  SMLIHGLVLSY  225

412) fliP in NC_008340


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score =   99 bits (360),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 126/189 (67%), Gaps = 11/189 (5%)

Query  68   SFTRIIIVLAILRQAMGTASTPSNQVLIGLALFLTLFVMAPV----FQEVHDTALAPYLA  123
            S+T+I++VL++LR+A+G    P+N VL G+AL+++ FVMAPV    F+  ++ + +   +
Sbjct  40   SYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG---S  96

Query  124  EEMAPDEALEAASEPMRGFMIAQTRESDLGLFLRIA----GYDQVDSPDDVPFTVLVPAF  179
            ++      L+A  EP R F++ +T E + ++F+R A      D+  +     + +L PAF
Sbjct  97   DNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAF  156

Query  180  MTSELKTAFTIGFIIYLPFLVIDLVVAstlmsmgmlmlspmiislpFKILLFVLVDGWSL  239
              SEL  AF IGF++YL F+VIDLVVA++LM+MG+  ++P  +++PFK+LLFV +DGWS+
Sbjct  157  TLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSM  216

Query  240  LMGTLASSF  248
            L+  L  S+
Sbjct  217  LIHGLVLSY  225

413) fliP in NC_006348


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 74/183 (41%), Positives = 123/183 (68%), Gaps = 13/183 (7%)

Query  1    MLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPVLDRAYNDAYKPFSEGTLQMDQAV--  58
            +L+LLR+AIG    PPN VL G+AL+++ FVM+PV   A++ A + ++ G+ +    V  
Sbjct  47   VLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSDNSRIVVLL  105

Query  59   QRGTAPFKAFMLKQTRETDLALFAKIS-------KAAPMQGPEDVPLSLLVPAFVTSELK  111
            +    PF+ F+LK+T E + A+F + +       KA+ +++ +   L +L PAF  SEL 
Sbjct  106  DACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDD---LLILAPAFTLSELT  162

Query  112  TGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFKLMLFVLVDGWQLLIGSLA  171
             +F+IGF +++ F++ID+VVA+ LM+MG+  V+P+ V++PFKL+LFV +DGW +LI +L 
Sbjct  163  EAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIHGLV  222

Query  172  QSF  174
             S+
Sbjct  223  LSY  225

414) fliP in NC_010516


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 98.9 bits (356),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 81/191 (43%), Positives = 129/191 (68%), Gaps = 9/191 (4%)

Query  74   MMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINT-KAIQPYMK  132
            ++TS+ + +VV+G+LRNA+G QQ PPN V+ G+AL+++ F+M PV   +++ KA Q Y  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAAQNYGA  94

Query  133  NKINQEQAV--EIGAKPLRQFMLKQTRQKDLKLFVDLAKPNFKVTKDNA----PLYIVVP  186
               N    V  +    P+RQF+LK+T +++  +F+  A+      K  +     L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  187  AFIISELKTAfqigfllfipfliidlVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGW  246
            AF +SEL  AF+IGFLL++ F++IDLVVA+ LM+MG+  + P  +++PFKLLLFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  247  YLLVKSLVMSF  257
             +L+ +LV+S+
Sbjct  215  SMLIHGLVLSY  225

415) fliP in NC_012563


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 98.3 bits (354),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 128/191 (68%), Gaps = 9/191 (4%)

Query  74   MMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINT-KAIQPYMK  132
            ++TS+ + +VV+G+LRNA+G QQ PPN V+ G+AL+++ F+M PV   +++ KA Q Y  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAAQNYGA  94

Query  133  NKITQEQAV--EIGAKPLRQFMLKQTRQKDLKLFVELAKPNFKVTKDNA----PLYIVVP  186
                    V  +    P+RQF+LK+T +++  +F+  A+      K  +     L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  187  AFIISELKTAfqigfllfipfliidlVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGW  246
            AF +SEL  AF+IGFLL++ F++IDLVVA+ LM+MG+  + P  +++PFKLLLFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  247  YLLVKSLVMSF  257
             +L+ +LV+S+
Sbjct  215  SMLIHGLVLSY  225

416) fliP in NC_009697


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 98.3 bits (354),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 128/191 (68%), Gaps = 9/191 (4%)

Query  74   MMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINT-KAIQPYMK  132
            ++TS+ + +VV+G+LRNA+G QQ PPN V+ G+AL+++ F+M PV   +++ KA Q Y  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAAQNYGA  94

Query  133  NKITQEQAV--EIGAKPLRQFMLKQTRQKDLKLFVELAKPNFKVTKDNA----PLYIVVP  186
                    V  +    P+RQF+LK+T +++  +F+  A+      K  +     L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  187  AFIISELKTAfqigfllfipfliidlVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGW  246
            AF +SEL  AF+IGFLL++ F++IDLVVA+ LM+MG+  + P  +++PFKLLLFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  247  YLLVKSLVMSF  257
             +L+ +LV+S+
Sbjct  215  SMLIHGLVLSY  225

417) fliP in NC_009495


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 98.3 bits (354),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 128/191 (68%), Gaps = 9/191 (4%)

Query  74   MMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINT-KAIQPYMK  132
            ++TS+ + +VV+G+LRNA+G QQ PPN V+ G+AL+++ F+M PV   +++ KA Q Y  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAAQNYGA  94

Query  133  NKITQEQAV--EIGAKPLRQFMLKQTRQKDLKLFVELAKPNFKVTKDNA----PLYIVVP  186
                    V  +    P+RQF+LK+T +++  +F+  A+      K  +     L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  187  AFIISELKTAfqigfllfipfliidlVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGW  246
            AF +SEL  AF+IGFLL++ F++IDLVVA+ LM+MG+  + P  +++PFKLLLFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  247  YLLVKSLVMSF  257
             +L+ +LV+S+
Sbjct  215  SMLIHGLVLSY  225

418) fliP in NC_009698


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 98.3 bits (354),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 128/191 (68%), Gaps = 9/191 (4%)

Query  74   MMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINT-KAIQPYMK  132
            ++TS+ + +VV+G+LRNA+G QQ PPN V+ G+AL+++ F+M PV   +++ KA Q Y  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAAQNYGA  94

Query  133  NKITQEQAV--EIGAKPLRQFMLKQTRQKDLKLFVELAKPNFKVTKDNA----PLYIVVP  186
                    V  +    P+RQF+LK+T +++  +F+  A+      K  +     L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  187  AFIISELKTAfqigfllfipfliidlVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGW  246
            AF +SEL  AF+IGFLL++ F++IDLVVA+ LM+MG+  + P  +++PFKLLLFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  247  YLLVKSLVMSF  257
             +L+ +LV+S+
Sbjct  215  SMLIHGLVLSY  225

419) fliP in NC_012658


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 98.3 bits (354),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 128/191 (68%), Gaps = 9/191 (4%)

Query  74   MMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINT-KAIQPYMK  132
            ++TS+ + +VV+G+LRNA+G QQ PPN V+ G+AL+++ F+M PV   +++ KA Q Y  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAAQNYGA  94

Query  133  NKITQEQAV--EIGAKPLRQFMLKQTRQKDLKLFVELAKPNFKVTKDNA----PLYIVVP  186
                    V  +    P+RQF+LK+T +++  +F+  A+      K  +     L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  187  AFIISELKTAfqigfllfipfliidlVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGW  246
            AF +SEL  AF+IGFLL++ F++IDLVVA+ LM+MG+  + P  +++PFKLLLFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  247  YLLVKSLVMSF  257
             +L+ +LV+S+
Sbjct  215  SMLIHGLVLSY  225

420) H04402_02743 in NC_017299


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 98.3 bits (354),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 128/191 (68%), Gaps = 9/191 (4%)

Query  74   MMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINT-KAIQPYMK  132
            ++TS+ + +VV+G+LRNA+G QQ PPN V+ G+AL+++ F+M PV   +++ KA Q Y  
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV--GMEAFKAAQNYGA  94

Query  133  NKITQEQAV--EIGAKPLRQFMLKQTRQKDLKLFVDLAKPNFKVTKDNA----PLYIVVP  186
                    V  +    P+RQF+LK+T +++  +F+  A+      K  +     L I+ P
Sbjct  95   GSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  187  AFIISELKTAfqigfllfipfliidlVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGW  246
            AF +SEL  AF+IGFLL++ F++IDLVVA+ LM+MG+  + P  +++PFKLLLFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  247  YLLVKSLVMSF  257
             +L+ +LV+S+
Sbjct  215  SMLIHGLVLSY  225

421) fliP in NC_017297


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 96.8 bits (348),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 81/190 (43%), Positives = 126/190 (67%), Gaps = 7/190 (3%)

Query  74   MMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMYPVYSEVNTKAIQPYMKN  133
            ++TS+ + +VV+G+LRNA+G QQ PPN V+ G+AL+++ F+M PV  E   KA Q Y   
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGME-AFKAAQNYGAG  95

Query  134  KITQEQAV--EIGAKPLRQFMLKQTRQKDLKLFVDLAKPNFKVTKDNA----PLYIVVPA  187
                   V  +    P+RQF+LK+T +++  +F+  A+      K  +     L I+ PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  188  FIISELKTAfqigfllfipfliidlVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGWY  247
            F +SEL  AF+IGFLL++ F++IDLVVA+ LM+MG+  + P  +++PFKLLLFV +DGW 
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  248  LLVKSLVMSF  257
            +L+ +LV+S+
Sbjct  216  MLIHGLVLSY  225

422) fliP in NC_009699


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 96.8 bits (348),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 81/190 (43%), Positives = 126/190 (67%), Gaps = 7/190 (3%)

Query  74   MMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMYPVYSEVNTKAIQPYMKN  133
            ++TS+ + +VV+G+LRNA+G QQ PPN V+ G+AL+++ F+M PV  E   KA Q Y   
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGME-AFKAAQNYGAG  95

Query  134  KITQEQAV--EIGAKPLRQFMLKQTRQKDLKLFVDLAKPNFKVTKDNA----PLYIVVPA  187
                   V  +    P+RQF+LK+T +++  +F+  A+      K  +     L I+ PA
Sbjct  96   SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  188  FIISELKTAfqigfllfipfliidlVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGWY  247
            F +SEL  AF+IGFLL++ F++IDLVVA+ LM+MG+  + P  +++PFKLLLFV +DGW 
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  248  LLVKSLVMSF  257
            +L+ +LV+S+
Sbjct  216  MLIHGLVLSY  225

423) Fbal_2331 in NC_014541


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 95.7 bits (344),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 82/201 (41%), Positives = 133/201 (67%), Gaps = 11/201 (5%)

Query  48   LSFLPAMLLMMTSFTRIIVVLAVLRQALGLQQSPPNKLLIGIALVLTLFIMRPVWTEIHE  107
            L++LP   +++TS+T+I+VVL++LR+A+G+QQ PPN +L G+AL+++ F+M PV  E   
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  108  QAFLPYDNGELTLKQAV--AVAEVPLRTFMLGQTRETDLEQMLKIAGE------STQLSA  159
             A   Y+ G    +  V       P+R F+L +T E +    ++ A +      +T L +
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKS  146

Query  160  EEVPFSVLMPAFVLSELKTAFQIGFLLFIPFLVIDlvvasvlmsmgmmmlspliislpFK  219
            +++   +L PAF LSEL  AF+IGFLL++ F+VIDLVVA+ LM+MG+  ++P  +++PFK
Sbjct  147  DDL--LILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFK  204

Query  220  LMVFVLVDGWSMTVGTLAASF  240
            L++FV +DGWSM +  L  S+
Sbjct  205  LLLFVAMDGWSMLIHGLVLSY  225

424) Afer_0155 in NC_013124


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 93.9 bits (337),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 138/207 (67%), Gaps = 8/207 (3%)

Query  30   IILALTVLSLAPTLLVLFTGFVEIVVVLSITRNALGLSTTPPNQVLAGLALFLSLFVMAP  89
            ++L + +L+L P   ++ T++  IVVVL++ RNA+G+   PPN VL G+AL++S FVMAP
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  90   TLGIVEHQAVLPYLHGHISA--VVALDRAEGPIKLWMLRHTRTQELALFDVVTHHa----  143
             +G+   +A   Y  G  ++  VV LD    P++  +L+HT  +E A+F   +++     
Sbjct  81   -VGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  144  -gvapaaapldavvpaFILSELHSAFVMGFIIYVPFLVIDlvvssvlmslgmmmlPPTLV  202
             + +  +  L  + PAF LSEL  AF +GF++Y+ F+VIDLVV++ LM++G+  + PT V
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  203  SLPFKLLLFVLVDGWTLVAHALLVSLH  229
            ++PFKLLLFV +DGW+++ H+L++S +
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSYR  226

425) fliP in NC_008048


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 92.3 bits (331),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 126/186 (68%), Gaps = 7/186 (3%)

Query  75   FTRIIIVLSILRHALGLQQTPPNQvlvglslflslfvMQPVISEVNRVAIEPYG--QEQI  132
            +T+I++VL++LR+A+G+QQ PPN VL G++L++S FVM PV  E  + A + YG   ++ 
Sbjct  41   YTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSDNS  99

Query  133  DIGEAVSRSGDALHGFMMKQTRKTDLMMFAKIARA----PAYASPKDVPFSILLPAFVTS  188
             I   +    ++++ F++K+T   +   F + A+        ++ K   + IL PAF  S
Sbjct  100  RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTLS  159

Query  189  ELKTAFQIGFLIFLPFLVIDLIVasalmslgmmmlsPTIISMPFKLLLFVLVDGWALTMG  248
            EL  AF+IGFL++L F+VIDL+VA+ALM++G+  ++PT +++PFKLLLFV +DGW++ + 
Sbjct  160  ELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLIH  219

Query  249  SLAASF  254
            +L  S+
Sbjct  220  GLVLSY  225

426) fliP in NC_008789


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 91.8 bits (329),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 76/187 (41%), Positives = 123/187 (66%), Gaps = 7/187 (3%)

Query  64   AFTRIIVVLAILRQALGTASTPSNQVLIGLALFLTLFVMMPVFDEINETALQPYMaeemg  123
            ++T+I+VVL++LR+A+G    P+N VL G+AL+++ FVM PV  E   +A Q Y A    
Sbjct  40   SYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSDN  98

Query  124  aeeale--qaSEPMREFMIRQTREDDIALFLRIAD----YGEVDSPDDVPMSVLIPAFMT  177
            +   +      EP R+F++++T E + A+F+R A+     +   +     + +L PAF  
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  178  SELKTAFIIGFVLYLPFLVIDLVVAstlmsmgmlmlspmiislpFKIMLFVLVDGWSLIM  237
            SEL  AF IGF+LYL F+VIDLVVA++LM+MG+  ++P  +++PFK++LFV +DGWS+++
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  238  GTLASSF  244
              L  S+
Sbjct  219  HGLVLSY  225

427) Mpop_0498 in NC_010725


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 88.1 bits (315),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 145/205 (71%), Gaps = 5/205 (2%)

Query  52   LVALITVLALAPSVLVMATSFTRIVVVLSILRSALGTQTAPPNTVMVSLALFLTAFVMAP  111
            L+ ++ +L+L P   ++ TS+T+IVVVL++LR+A+G Q  PPN V+ ++AL+++ FVMAP
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  112  TAREAYRAGVEPLVAGQISQSQA-FERASAPFKTFMLRNVREKDLKLFLDMARQPAPAGP  170
             + EA++A+ +   +++ S+    ++    PF+ F+L++  E++  +F+  A+Q  P + 
Sbjct  81   VGMEAFKAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDK  140

Query  171  EAI----GLEIVTPAFMISELRRAfeigfllfipfliidlvvasvlmamgmmmlppaTVA  226
             +     +L I++PAF +SEL  AF IGFLL++ F++IDLVVA+ LMAMG+  + P+ VA
Sbjct  141  ATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVA  200

Query  227  LPFKLIFFVLVDGWTLVAGSLIQSY  251
            +PFKL++FV +DGW+++  +L+ SY
Sbjct  201  IPFKLLLFVAMDGWSMLIHGLVLSY  225

428) fliP in NC_008699


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 87.8 bits (314),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 85/188 (46%), Positives = 127/188 (68%), Gaps = 7/188 (3%)

Query  83   TAFTKIFVVLGLTRNALGLQQTPPNQVLAGLALFLSLFVMGPVLSDINEVGLQPYLNGDK  142
            T++TKI VVLGL RNA+G+QQ PPN VL G+AL++S FVM+PV  +    + Q Y  G  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSD  97

Query  143  TTSVAI--QDGIEPLRDFMLDNTDDDELMLLTNVAGRDLPEDRADVSTA----TLIPAFV  196
             + + +  +   EP+R+F+L +T + E  ++   A +  P D+A    +     L PAF 
Sbjct  98   NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFT  157

Query  197  LTELKQAfiigfiifipflviDLVvsgalmalgmmmmppvmvslpFKLLLFVLVDGWALV  256
            L+EL +AF IGF++++ F+VIDLVV+ ALMA+G+  + P  V++PFKLLLFV +DGW+++
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  257  IKSLVASY  264
            I +LV SY
Sbjct  218  IHGLVLSY  225

429) Metme_4070 in NC_015572


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 83.1 bits (296),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 80/187 (43%), Positives = 125/187 (67%), Gaps = 7/187 (3%)

Query  69   SFTRIMIVlgllrqalgaqqaPSNQVLLGLSLFLTIFIMMPVLEKVNDTAVQPYLEEKMD  128
            S+T+I++VLGLLR+A+G QQ P+N VL G++L+++ F+M PV       A Q Y     +
Sbjct  40   SYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPV-GMEAFKAAQNYGAGSDN  98

Query  129  A--VTALQAASEPLKQFMLKQTRESDIDMFVR----ISGKEQINKPEDVPFSLLLPAYVT  182
            +  V  L+A  EP++QF+LK+T E +   F+R    I  K++        + +L PA+  
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAFTL  158

Query  183  SELKTAFQIGFLVFLPFLVIDlvvasvlmsmgmmmlspmivsLPFKIMLFVLADGWSLVL  242
            SEL  AF+IGFL++L F+VIDLVVA+ LM+MG+  ++P  V++PFK++LFV  DGWS+++
Sbjct  159  SELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSMLI  218

Query  243  EMLAASF  249
            + L  S+
Sbjct  219  HGLVLSY  225

430) fliP in NC_020561


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 82.8 bits (295),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 81/191 (43%), Positives = 126/191 (66%), Gaps = 13/191 (6%)

Query  87   TSFTRIIIVLSILRQALGLQQTPPNQVLVGLALFLSLFVMRPVIAEINTSAYTPYGAGQI  146
            TS+T+I++VL++LR+A+G+QQ PPN VL G+AL++S FVM PV  E   +A   YGAG  
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSD  97

Query  147  G--IEDAIKRSGTALHGFMVKQTRETDLKLFADLA-------KVPPFASTAEIPFSILLP  197
               I   +     +++ F++K+T E +  +F   A       K   + S   +   IL P
Sbjct  98   NSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL---ILAP  154

Query  198  SFVTSELKTAfqigfliflpfliidlVVASTLMALGMMMLSPSIVSMPFKLLLFVMVDGW  257
            +F  SEL  AF+IGFL++L F++IDLVVA++LMA+G+  ++P+ V++PFKLLLFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  258  ALTMGSLAGSF  268
            ++ + +L  S+
Sbjct  215  SMLIHGLVLSY  225

431) fliP in NC_008686


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 80.2 bits (285),  Expect = 9e-17, Method: Compositional matrix adjust.
 Identities = 86/209 (42%), Positives = 131/209 (63%), Gaps = 12/209 (5%)

Query  43   TLLAVMTALSLAPGIAIMVTCFPFIVTVLSILRQSLGLQQSPPNMLIVSLAMFLTWFVMN  102
            +LL V+  L+L P  A++VT +  IV VL++LR+++G+QQ PPNM++ ++A++++ FVM 
Sbjct  20   SLLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMA  79

Query  103  PVLTEAWDVA---GAPLRDGRITVEQAFERGIVPFRGF-MEHRTDPE----MLATLae--  152
            PV  EA   A   GA   ++RI V   ++    PFR F + H  + E    M ++     
Sbjct  80   PVGMEAFKAAQNYGAGSDNSRIVV--LLDACREPFRQFLLKHTPEREKAFFMRSAQQIWP  137

Query  153  iapdpeaapdRLSVLIPAFMISEIQRAFEIGFLVALPFLIIDlvvsavlmsmgmmmvppv  212
                    +D L +L PAF +SE+  AF IGFL+ L F++IDLVV+  LM+MG+  V P 
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  213  vvalpFKLAFFVVVDGWGMIAAALVRSYQ  241
             VA+PFKL +FV +DGW+M+  +LV SY+
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSYR  226

432) Q7C_1257 in NC_017856


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 78.9 bits (280),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 83/206 (41%), Positives = 140/206 (68%), Gaps = 7/206 (3%)

Query  44   ILALMTVLTLLPAGLMMMTSFTRIIIVMAILRQALGVQSTPSNQVLLGLALFLTIFIMHP  103
            +L ++ +L LLP + M++TS+T+I++V+++LR+A+GVQ  P+N VL G+AL+++ F+M P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  104  VFGSAYENGVKPYMDGGMQPTEAI--TAASAPFRDFMLAQTRETDIALFAEIGGYA-PLQ  160
            V   A+ ++ + Y  G+ ++   +   A   PFR+F+L +T E + A+F   +    P +
Sbjct  81   VGMEAF-KAAQNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKD  139

Query  161  SAEDVPFSLLL---PAFVTSELKTAFQigflifipfliidlvvasvlmamgmmmlspmli  217
             A  +    LL   PAF  SEL  AF+IGFL+++ F++IDLVVA+ LMAMG+  ++P  +
Sbjct  140  KATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNV  199

Query  218  slpFKLMLFVLIDGWALLMGTLASSF  243
            ++PFKL+LFV +DGW++L+  L  S+
Sbjct  200  AIPFKLLLFVAMDGWSMLIHGLVLSY  225

433) fliP in NC_007484


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 77.3 bits (274),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 82/203 (41%), Positives = 139/203 (69%), Gaps = 7/203 (3%)

Query  62   LMTVLTLLPAAVMVMTSFTRIIVVFSILRQALGLAQTPSSQILIGLALFLTFFIMSPVLD  121
            ++ +L LLP A MV+TS+T+I+VV+++LR+A+G+ Q P++ +L G+AL+++ F+M+PV  
Sbjct  24   VVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM  83

Query  122  KAYQEGVKPY--FQEEISVTDALARVREPFHHFMIAQTRETDLKLF----AEISGREAFE  175
             A++ + + Y    ++  +   L   REPF++F++ +T E +  +F     +I  ++   
Sbjct  84   EAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKAT  142

Query  176  SPEQVPFSLLVPAFITSELKTAfqigfllfipfliidlvvasvlmamgmmmlspmlvslp  235
            +     + +L PAF  SEL  AF+IGFLL++ F++IDLVVA+ LMAMG+  ++P  V++P
Sbjct  143  TLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIP  202

Query  236  FKLLLFVLIDGWSLLMGTLASSF  258
            FKLLLFV +DGWS+L+  L  S+
Sbjct  203  FKLLLFVAMDGWSMLIHGLVLSY  225

434) fliP in NC_009049


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 133/208 (64%), Gaps = 12/208 (5%)

Query  39   LIAVITLLSLVPALAMMITCFPFIVTVLSILRQAIGLQQAPPNMLIVSLALFLTWYVMDP  98
            L+ V+ +L+L+P  AM++T +  IV VL++LR+AIG+QQ PPNM++ ++AL+++ +VM P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  99   V----FTEAWTRGIGPLTRNELDLPQALAAAAVPFRGFMTGRI-DPDT---LAALQALRP  150
            V    F  A   G G+     + L   L A   PFR F+  +  + +    + + Q ++P
Sbjct  81   VGMEAFKAAQNYGAGSDNSRIVVL---LDACREPFRQFLLKHTPEREKAFFMRSAQQIWP  137

Query  151  -GPAAPPSEAsfsvlvpsfllsEIQRAFEIGFLIYLPFLIIDlvvsavlmsmgmmmvppa  209
             + A+      + +L P+F LSE+  AF IGFL+YL F++IDLVV+  LM+MG+  V P+
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  210  vvsmpFKLAFFVVADGWSLISGALVRSY  237
             V++PFKL +FV  DGWS++  +LV SY
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

435) fliP in NC_008702


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 76.0 bits (269),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 132/191 (70%), Gaps = 7/191 (3%)

Query  72   LMMTSFTRIIIVFSLLRQAIGTQTSPPNQVLLGLALFLTFFIMAPVADKVY--LEAYQPM  129
            +++TS+T+I++V++LLR+AIG Q  PPN VL G+AL+++ F+MAPV+   +   + Y + 
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  130  SEGRISFEQALERATVPVKAFMLKQVREPDLSLFTGLAKHP-PVEKAEDL---PMRVVVP  185
            S+    +   L+    P + F+LK+  E + ++F   A++  P +KA  L    + ++ P
Sbjct  96   SDNS-RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  186  AFVTSELKTAfqigfivfipfiiiDmvvasvlmsmgmmmmspvivsLPFKIMLFVLVDGW  245
            AF  SEL  AF+IGF++++ FI+ID+VVA+ LM+MG+  ++P  V++PFK++LFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  246  TLLIGSLVQSF  256
            ++LI +LV S+
Sbjct  215  SMLIHGLVLSY  225

436) Nwat_0923 in NC_014315


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 82/203 (41%), Positives = 139/203 (69%), Gaps = 7/203 (3%)

Query  62   LMTVLTLLPAAVMVMTSFTRIIVVFSILRQALGLAQTPSSQILIGLALFLTFFIMSPVLD  121
            ++ +L LLP A MV+TS+T+I+VV+++LR+A+G+ Q P++ +L G+AL+++ F+M+PV  
Sbjct  24   VVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGM  83

Query  122  KAYQEGVKPY--FQEEISVADALARVREPFHHFMIAQTRETDLKLF----AEISGREAFE  175
             A++ + + Y    ++  +   L   REPF++F++ +T E +  +F     +I  ++   
Sbjct  84   EAFKAA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKAT  142

Query  176  SPEQVPFSLLVPAFITSELKTAfqigfllfipfliidlvvasvlmamgmmmlspmlvslp  235
            +     + +L PAF  SEL  AF+IGFLL++ F++IDLVVA+ LMAMG+  ++P  V++P
Sbjct  143  TLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIP  202

Query  236  FKLLLFVLIDGWSLLMGTLASSF  258
            FKLLLFV +DGWS+L+  L  S+
Sbjct  203  FKLLLFVAMDGWSMLIHGLVLSY  225

437) fliP in NC_011662


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 79/191 (42%), Positives = 132/191 (70%), Gaps = 7/191 (3%)

Query  71   LMTTCFTRIVIVFSLLRQAMGTQTAPPNQVLLGLALFLTFFVMAPVGERVY--TEAYLPM  128
            ++ T +T+IV+V++LLR+A+G Q  PPN VL G+AL+++ FVMAPVG   +  ++ Y + 
Sbjct  36   MVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAG  95

Query  129  SEGRIQFDEALERASVPVKGFMLKQVREPDLALF-AGLAKLPPVDKAEDL---PMRVVIP  184
            S+   ++   L+    P + F+LK+  E + A+F  +  ++ P DKA  L    + ++ P
Sbjct  96   SDNS-RIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAP  154

Query  185  AFVTSELKTAfqigfivfipfiiiDmvvasvlmsmgmmmmspvivsLPFKIMLFVLVDGW  244
            AF  SEL  AF+IGF++++ FI+ID+VVA+ LM+MG+  ++P  V++PFK++LFV +DGW
Sbjct  155  AFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGW  214

Query  245  TLLIGSLVQSF  255
            ++LI +LV S+
Sbjct  215  SMLIHGLVLSY  225

438) fliP1 in NC_007493


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 72.9 bits (257),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 133/208 (64%), Gaps = 12/208 (5%)

Query  39   LIAVITLLSLVPALAMMITCFPFIVTVLSILRQAIGLQQAPPNMLIVSLALFLTWYVMDP  98
            L+ V+ +L+L+P  AM++T +  IV VL++LR+AIG+QQ PPNM++ ++AL+++ +VM P
Sbjct  21   LLLVVIMLGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAP  80

Query  99   V----FTEAWTRGIGPLTRNELDLPQALAAAAVPFRGFMTGRI-DPDT---LAALQALRP  150
            V    F  A   G G+     + L   L A   PFR F+  +  + +    + + Q ++P
Sbjct  81   VGMEAFKAAQNYGAGSDNSRIVVL---LDACREPFRQFLLKHTPEREKAFFMRSAQQIWP  137

Query  151  -GPAAppsevsfsvlvpsfllseIQRAFEIGFLIYLPFLIIDlvvsavlmsmgmmmvppa  209
             + A+      + +L P+F LSE+  AF IGFL+YL F++IDLVV+  LM+MG+  V P+
Sbjct  138  KDKATTLKSDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPT  197

Query  210  vvsmpFKLAFFVVADGWSLISGALVRSY  237
             V++PFKL +FV  DGWS++  +LV SY
Sbjct  198  NVAIPFKLLLFVAMDGWSMLIHGLVLSY  225

439) Anae109_0745 in NC_009675


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 68.4 bits (240),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 88/189 (47%), Positives = 137/189 (73%), Gaps = 1/189 (0%)

Query  34   MLTSFLKIVVVLSIARSALGAPQVPPNtavtglalvltalvMAPvgeravaamraapagh  93
            ++TS+ KIVVVL++ R+A+G  QVPPN  + G+AL+++ +VMAPVG  A  A +   AG 
Sbjct  37   VVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQNYGAGS  96

Query  94   gvaGTLAQLERGSDPLRGfllrfaraddraafvdvarrlrGPDAAPP-AERDLAVLAPAF  152
            + +  +  L+   +P+R FLL+ +   ++A F+  A++++  D A      DL +LAPAF
Sbjct  97   DNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPAF  156

Query  153  VVSELRRAFTIGflvfvpflvvdlvvsnvllalGLTQLSPTSIALPFKLLLFVAVDGWKL  212
             +SEL  AF IGFL+++ F+V+DLVV+N L+A+GL+Q++PT++A+PFKLLLFVA+DGW +
Sbjct  157  TLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSM  216

Query  213  LARALALSY  221
            L ++L LSY
Sbjct  217  LIHGLVLSY  225

440) R2APBS1_2987 in NC_020541


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 68.1 bits (239),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 128/188 (69%), Gaps = 9/188 (4%)

Query  67   SFTRIIIVLGFLRQALGTQSTPPNQVllglalfltlFVMSPVLNKSYADGVKPYMDGqla  126
            S+T+I++VLG+LR+A+G Q  PPN VL G+AL+++ FVM+PV   ++  + + Y  G   
Sbjct  40   SYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAF-KAAQNYGAGSDN  98

Query  127  aeqalpaasa--pFKQFMLDQTREADLALFTRLAG-----EKPYAAKADVPFKVAMPAFL  179
            +   +   +   PF+QF+L +T E + A+F R A      +K+ + K+D  + +A PAF 
Sbjct  99   SRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILA-PAFT  157

Query  180  TSELKTAFQMGfllfipfliiDLvvasvlmsmgmmmvspmiisLPFKIMLFVLVDGWTLL  239
             SEL  AF++GFLL++ F++IDLVVA+ LM+MG+  V+P  +++PFK++LFV +DGW++L
Sbjct  158  LSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWSML  217

Query  240  LGTLAGSF  247
            +  L  S+
Sbjct  218  IHGLVLSY  225

441) Nhal_3616 in NC_013960


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 62.6 bits (218),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 135/200 (68%), Gaps = 9/200 (4%)

Query  73   LTLLPAAVMMMTSFTRIIVVLSILRQALGLAQTPSSQiligltlfltffiMGPVLDKAYQ  132
            L LLP A M++TS+T+I+VVL++LR+A+G+ Q P++ +L G++L+++ F+M+PV   A++
Sbjct  28   LGLLPFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFK  87

Query  133  EGVRPY--LQEEISVTEALVRTREPFRHFMMAQTRETDLQLFAEIAGQKAFESPAQVPFS  190
             + + Y    ++  +   L   REPFR+F++ +T E +  +F   ++Q+         + 
Sbjct  88   AA-QNYGAGSDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMR-SAQQIWPKDKATTLK  145

Query  191  -----LLVPAFITSELKTAfqigfllfipfliidlvvasvlmamgmmmlspmlvslpFKL  245
                 +L PAF  SEL  AF+IGFLL++ F++IDLVVA+ LMAMG+  ++P  V++PFKL
Sbjct  146  SDDLLILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKL  205

Query  246  LLFVLIDGWSLLMGTLASSF  265
            LLFV +DGWS+L+  L  S+
Sbjct  206  LLFVAMDGWSMLIHGLVLSY  225

442) lfiP in NC_017075


> NC_006834_P1|18|G18|58579704|YP_198720.1|Xanthomonas_oryzae_pv._oryzae_KACC10331|-|17025..17705|hrcR|XOO0081|type 
III secretion 
system protein
Length=226

 Score = 52.4 bits (179),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 125/189 (67%), Gaps = 11/189 (5%)

Query  73   TSFTRFVIVlallrqalglqqglPNRIITGVALILTCLVMRPVGERIWTDALVPY----D  128
            TS+T++V+VL+LLR+A+G+QQ  PN ++ GVAL+++C+VM PVG      A   Y    D
Sbjct  39   TSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAA-QNYGAGSD  97

Query  129  EERIVMSEALERAAKPISAFMLAQTSKTALAQISRLAGEA-PVAKP---EEHAFTVKLAA  184
            + RIV+   L+    P+  F+L +T+    A + R A +  P  K+     + + +  +A
Sbjct  98   NSRIVV--LLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLLILAPA  155

Query  185  FVLSELKTAFQIGCMLFIPFLVIDlvvssllmamgmmmlsplvislplklllfvlvDGWT  244
            F LSEL  AF+IG +L++ F+VIDLVV++ LMAMG+  ++P  +++P+KLLLFV +DGW+
Sbjct  156  FTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVAMDGWS  215

Query  245  LTVDTLVTS  253
            + ++ LV S
Sbjct  216  MLIHGLVLS  224