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Homologs of vanRB gene of NC_004668_R1

271

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) vanRB
( NP_815956.1 )

DNA-binding response regulator VanRB

NC_004668
(Enterococcus faecalis V583)

5e-101

100

2) vanRB
( YP_005355978.1 )

DNA-binding response regulator VanRB

NC_017022
(Enterococcus faecium Aus0004)

1e-96

3) vanRB
( YP_008394254.1 )

DNA-binding response regulator VanRB

NC_021994
(Enterococcus faecium AUS0085)

1e-96

4) BCAH820_3209
( YP_002452159.1 )

alkaline phosphatase synthesis transcriptional regulatory proteinphoP

NC_011773
(Bacillus cereus AH820)

1e-85

5) Pjdr2_3220
( YP_003011947.1 )

winged helix family two component transcriptional regulator

NC_012914
(Paenibacillus sp. JDR-2)

2e-84

6) MC28_G291
( YP_006816263.1 )

Two-component response regulator vanRB

NC_018689
(Bacillus thuringiensis MC28)

1e-47

7) CBF_2020
( YP_005674903.1 )

DNA-binding response regulator

NC_017297
(Clostridium botulinum 230613)

9e-44

8) CLI_2035
( YP_001391293.1 )

DNA-binding response regulator

NC_009699
(Clostridium botulinum Langeland)

9e-44

9) H04402_01993
( YP_005678536.1 )

two-component response regulator

NC_017299
(Clostridium botulinum H04402 065)

1e-43

10) CLB_1908
( YP_001384228.1 )

DNA-binding response regulator

NC_009697
(Clostridium botulinum ATCC 19397)

2e-43

11) CBO1968
( YP_001254471.1 )

DNA-binding response regulator

NC_009495
(Clostridium botulinum ATCC 3502)

2e-43

12) CLC_1914
( YP_001387768.1 )

DNA-binding response regulator

NC_009698
(Clostridium botulinum Hall)

2e-43

13) CLM_2186
( YP_002804358.1 )

DNA-binding response regulator

NC_012563
(Clostridium botulinum Kyoto)

2e-43

14) CLD_2656
( YP_001781532.1 )

DNA-binding response regulator

NC_010516
(Clostridium botulinum Okra)

3e-43

15) CLJ_B2174
( YP_002862954.1 )

DNA-binding response regulator

NC_012658
(Clostridium botulinum 657)

4e-43

16) BcerKBAB4_5471
( YP_001642436.1 )

two component transcriptional regulator

NC_010180
(Bacillus weihenstephanensis KBAB4)

4e-43

17) CLK_1423
( YP_001787361.1 )

DNA-binding response regulator

NC_010520
(Clostridium botulinum Loch Maree)

6e-43

18) Nther_0984
( YP_001917156.1 )

two component transcriptional regulator, winged helix family

NC_010718
(Natranaerobius thermophilus JW/NM-WN-LF)

2e-42

19) OmpR2
( NP_979053.1 )

transcription response regulator-like protein

NC_003909
(Bacillus cereus ATCC 10987)

3e-42

20) CTC00189
( NP_780902.1 )

transcriptional regulatory protein

NC_004557
(Clostridium tetani E88)

3e-42

21) Bcer98_3617
( YP_001376811.1 )

two component transcriptional regulator

NC_009674
(Bacillus cytotoxicus NVH 391-98)

5e-42

22) CD630_21140
( YP_001088628.1 )

two-component response regulator

NC_009089
(Clostridium difficile 630)

8e-42

23) CD196_1978
( YP_003214999.1 )

two-component system response regulator

NC_013315
(Clostridium difficile CD196)

8e-42

24) CDR20291_2021
( YP_003218508.1 )

two-component system response regulator

NC_013316
(Clostridium difficile R20291)

8e-42

25) BCG9842_B2563
( YP_002446154.1 )

ResD family transcriptional regulator

NC_011772
(Bacillus cereus G9842)

3e-41

26) HD73_3280
( YP_007422379.1 )

Two-component response regulator vanRB

NC_020238
(Bacillus cereus HD73)

3e-41

27) vanRB
( YP_006927455.1 )

regulatory protein VanRB

NC_018877
(Bacillus thuringiensis Bt407)

3e-41

28) CT43_CH2706
( YP_005572672.1 )

two-component response regulator VanRB

NC_017208
(Bacillus thuringiensis CT-43)

3e-41

29) BTG_06080
( YP_006602741.1 )

two-component response regulator VanRB

NC_018500
(Bacillus thuringiensis HD-771)

3e-41

30) BTF1_11125
( YP_006610340.1 )

two-component response regulator VanRB

NC_018508
(Bacillus thuringiensis HD-789)

3e-41

31) H175_ch2755
( YP_007479216.1 )

Two-component response regulator vanRB

NC_020376
(Bacillus thuringiensis IS5056)

3e-41

32) BTG_10940
( YP_006603683.1 )

two-component response regulator VanRB

NC_018500
(Bacillus thuringiensis HD-771)

4e-41

33) Ilyop_1493
( YP_003967621.1 )

winged helix family two component transcriptional regulator

NC_014632
(Ilyobacter polytropus DSM 2926)

7e-41

34) BcerKBAB4_2424
( YP_001645263.1 )

two component transcriptional regulator

NC_010184
(Bacillus weihenstephanensis KBAB4)

7e-41

35) CC1_16950
( YP_007769858.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021009
(Coprococcus catus GD/7)

1e-40

36) MC28_1918
( YP_006828739.1 )

hypothetical protein

NC_018693
(Bacillus thuringiensis MC28)

2e-40

37) irr
( YP_006994428.1 )

response regulator

NC_019425
(Carnobacterium maltaromaticum LMA28)

3e-40

38) LMOSLCC7179_1041
( YP_006698734.1 )

signal transduction response regulator, receiver region

NC_018593
(Listeria monocytogenes SLCC7179)

5e-40

39) ROI_10070
( YP_007831251.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021040
(Roseburia intestinalis M50/1)

6e-40

40) CXIVA_02810
( YP_004707350.1 )

hypothetical protein

NC_015737
(Clostridium sp. SY8519)

1e-39

41) LM5578_1143
( YP_003413257.1 )

hypothetical protein

NC_013766
(Listeria monocytogenes 08-5578)

1e-39

42) LM5923_1097
( YP_003416302.1 )

hypothetical protein

NC_013768
(Listeria monocytogenes 08-5923)

1e-39

43) LMRG_00522
( YP_005962191.1 )

hypothetical protein

NC_017544
(Listeria monocytogenes 10403S)

1e-39

44) M642_02970
( YP_008271459.1 )

DeoR family transcriptional regulator

NC_021823
(Listeria monocytogenes C1-387)

1e-39

45) lmo1060
( NP_464585.1 )

hypothetical protein

NC_003210
(Listeria monocytogenes EGD-e)

1e-39

46) LMLG_2327
( YP_005970889.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_017547
(Listeria monocytogenes Finland 1988)

1e-39

47) LMKG_01862
( YP_005967979.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_017546
(Listeria monocytogenes FSL R2-561)

1e-39

48) LMOG_00660
( YP_005965054.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_017545
(Listeria monocytogenes J0161)

1e-39

49) M639_12340
( YP_008297028.1 )

DeoR family transcriptional regulator

NC_021837
(Listeria monocytogenes J2-031)

1e-39

50) BN418_1278
( YP_007603396.1 )

Regulatory protein VanRB

NC_020557
(Listeria monocytogenes La111)

1e-39

51) BN419_1275
( YP_007606524.1 )

Regulatory protein VanRB

NC_020558
(Listeria monocytogenes N53-1)

1e-39

52) LMOSLCC2372_1074
( YP_006684401.1 )

signal transduction response regulator, receiver region

NC_018588
(Listeria monocytogenes SLCC2372)

1e-39

53) LMOSLCC2479_1073
( YP_006687336.1 )

signal transduction response regulator, receiver region

NC_018589
(Listeria monocytogenes SLCC2479)

1e-39

54) LMOSLCC5850_1066
( YP_006695893.1 )

signal transduction response regulator, receiver region

NC_018592
(Listeria monocytogenes SLCC5850)

1e-39

55) Exig_2177
( YP_001814646.1 )

two component transcriptional regulator

NC_010556
(Exiguobacterium sibiricum 255-15)

2e-39

56) SSA_0896
( YP_001034871.1 )

two-component response transcriptional regulator

NC_009009
(Streptococcus sanguinis SK36)

4e-39

57) EUBREC_1462
( YP_002937350.1 )

hypothetical protein

NC_012781
(Eubacterium rectale ATCC 33656)

5e-39

58) CHY_1413
( YP_360245.1 )

DNA-binding response regulator

NC_007503
(Carboxydothermus hydrogenoformans Z-2901)

6e-39

59) RHOM_13295
( YP_004839697.1 )

DNA-binding response regulator

NC_015977
(Roseburia hominis A2-183)

2e-38

60) SGO_1417
( YP_001450697.1 )

response regulator protein

NC_009785
(Streptococcus gordonii Challis)

2e-38

61) I872_02985
( YP_007922854.1 )

two-component response transcriptional regulator

NC_021175
(Streptococcus oligofermentans AS 1.3089)

2e-38

62) SSUA7_1493
( YP_006085154.1 )

winged helix family two component transcriptional regulator

NC_017622
(Streptococcus suis A7)

2e-38

63) SSUBM407_1547
( YP_003029247.1 )

response regulator protein

NC_012926
(Streptococcus suis BM407)

2e-38

64) SSUD9_1668
( YP_006081090.1 )

winged helix family two component transcriptional regulator

NC_017620
(Streptococcus suis D9)

2e-38

65) SSGZ1_1492
( YP_006074890.1 )

two-component regulator

NC_017617
(Streptococcus suis GZ1)

2e-38

66) SSUJS14_1631
( YP_006076962.1 )

winged helix family two component transcriptional regulator

NC_017618
(Streptococcus suis JS14)

2e-38

67) SSU1472
( YP_003027314.1 )

response regulator protein

NC_012925
(Streptococcus suis P1/7)

2e-38

68) YYK_07040
( YP_006650319.1 )

winged helix family two component transcriptional regulator

NC_018526
(Streptococcus suis S735)

2e-38

69) NJAUSS_1536
( YP_007571478.1 )

two-component regulator

NC_020526
(Streptococcus suis SC070731)

2e-38

70) SSUSC84_1500
( YP_003025488.1 )

response regulator protein

NC_012924
(Streptococcus suis SC84)

2e-38

71) SSU12_1607
( YP_006079034.1 )

winged helix family two component transcriptional regulator

NC_017619
(Streptococcus suis SS12)

2e-38

72) SSUST1_1538
( YP_006359408.1 )

winged helix family two component transcriptional regulator

NC_017950
(Streptococcus suis ST1)

2e-38

73) SSUST3_1504
( YP_004402109.1 )

winged helix family two component transcriptional regulator

NC_015433
(Streptococcus suis ST3)

2e-38

74) Theco_1889
( YP_007213017.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019897
(Thermobacillus composti KWC4)

3e-38

75) mprA3
( YP_005959726.1 )

response regulator MprA

NC_017542
(Paenibacillus polymyxa M1)

4e-38

76) PPSC2_c2313
( YP_003946526.1 )

alkaline phosphatase synthesis transcriptional regulatory proteinphop

NC_014622
(Paenibacillus polymyxa SC2)

4e-38

77) Cbei_4103
( YP_001311169.1 )

two component transcriptional regulator

NC_009617
(Clostridium beijerinckii NCIMB 8052)

4e-38

78) HPL003_10930
( YP_005075168.1 )

transcriptional regulatory protein resD

NC_016641
(Paenibacillus terrae HPL-003)

4e-38

79) Ilyop_2523
( YP_003968630.1 )

two component transcriptional regulator, winged helix family

NC_014633
(Ilyobacter polytropus DSM 2926)

5e-38

80) RTO_22280
( YP_007787241.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021015
([Ruminococcus] torques L2-14)

5e-38

81) phoP
( YP_003565202.1 )

two-component response regulator PhoP

NC_014019
(Bacillus megaterium QM B1551)

8e-38

82) phoP
( YP_003599925.1 )

two-component response regulator PhoP

NC_014103
(Bacillus megaterium DSM 319)

1e-37

83) phoP
( YP_005492678.1 )

alkaline phosphatase synthesis transcriptional regulatory protein phoP

NC_017138
(Bacillus megaterium WSH-002)

1e-37

84) RHOM_11290
( YP_004839298.1 )

hypothetical protein

NC_015977
(Roseburia hominis A2-183)

1e-37

85) BBR47_41940
( YP_002773675.1 )

two-component response regulator

NC_012491
(Brevibacillus brevis NBRC 100599)

2e-37

86) SFUL_3399
( YP_007932213.1 )

Two-component system response regulator

NC_021177
(Streptomyces fulvissimus DSM 40593)

1e-36

87) TherJR_2641
( YP_003641378.1 )

two component transcriptional regulator, winged helix family

NC_014152
(Thermincola potens JR)

1e-36

88) BpOF4_06195
( YP_003426193.1 )

winged helix family two component transcriptional regulator

NC_013791
(Bacillus pseudofirmus OF4)

3e-36

89) phoP
( YP_001487773.1 )

response regulator PhoP

NC_009848
(Bacillus pumilus SAFR-032)

6e-36

90) GTNG_0792
( YP_001124915.1 )

two-component response regulator

NC_009328
(Geobacillus thermodenitrificans NG80-2)

6e-36

91) phoP2
( YP_006714395.1 )

two-component response regulator PhoP

NC_006322
(Bacillus licheniformis DSM 13)

7e-36

92) phoP
( YP_080203.2 )

two-component response regulator

NC_006270
(Bacillus licheniformis DSM 13)

7e-36

93) phoP
( YP_008079221.1 )

two-component response regulator PhoP

NC_021362
(Bacillus licheniformis 9945A)

9e-36

94) Eab7_0619
( YP_006790376.1 )

two component transcriptional regulator, winged helix family

NC_018665
(Exiguobacterium antarcticum Eab7)

1e-35

95) GK0908
( YP_146761.1 )

two-component response regulator

NC_006510
(Geobacillus kaustophilus HTA426)

1e-35

96) GC56T3_2648
( YP_003672176.1 )

winged helix family two component transcriptional regulator

NC_014206
(Geobacillus sp. C56-T3)

1e-35

97) GTCCBUS3UF5_10780
( YP_004981495.1 )

Two component transcriptional regulator, winged helix

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

1e-35

98) Amet_3209
( YP_001321006.1 )

two component transcriptional regulator

NC_009633
(Alkaliphilus metalliredigens QYMF)

2e-35

99) CLS_07200
( YP_007848488.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021047
(Clostridium saccharolyticum K10)

3e-35

100) Desdi_1113
( YP_007220024.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019903
(Desulfitobacterium dichloroeliminans LMG P-21439)

3e-35

101) GWCH70_2675
( YP_002950634.1 )

winged helix family two component transcriptional regulator

NC_012793
(Geobacillus sp. WCH70)

5e-35

102) Dtox_2915
( YP_003192294.1 )

two component transcriptional regulator, winged helix family

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

7e-35

103) pcoR
( YP_007521519.1 )

Transcriptional regulatory protein pcoR

NC_020504
(Streptomyces davawensis JCM 4913)

1e-34

104) Calhy_2332
( YP_003993402.1 )

two component transcriptional regulator, winged helix family

NC_014652
(Caldicellulosiruptor hydrothermalis 108)

2e-34

105) GTNG_2656
( YP_001126746.1 )

two-component response regulator

NC_009328
(Geobacillus thermodenitrificans NG80-2)

2e-34

106) Ththe16_1739
( YP_005641261.1 )

winged helix family two component transcriptional regulator

NC_017272
(Thermus thermophilus SG0.5JP17-16)

2e-34

107) Calow_0190
( YP_004001596.1 )

two component transcriptional regulator, winged helix family

NC_014657
(Caldicellulosiruptor owensensis OL)

3e-34

108) Aaci_0044
( YP_003183497.1 )

winged helix family two component transcriptional regulator

NC_013205
(Alicyclobacillus acidocaldarius DSM 446)

3e-34

109) czcR2
( YP_001354044.1 )

heavy metal response regulator

NC_009659
(Janthinobacterium sp. Marseille)

3e-34

110) Calla_2103
( YP_004799643.1 )

winged helix family two component transcriptional regulator

NC_015949
(Caldicellulosiruptor lactoaceticus 6A)

5e-34

111) irr
( YP_002996640.1 )

two-component response regulator

NC_012891
(Streptococcus dysgalactiae GGS_124)

5e-34

112) Calkr_0246
( YP_004025424.1 )

two component transcriptional regulator, winged helix family

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

6e-34

113) irr
( YP_006904521.1 )

transcriptional regulator ycf27

NC_019042
(Streptococcus dysgalactiae AC-2713)

6e-34

114) SDE12394_05215
( YP_006013107.1 )

Two-component system response regulator

NC_017567
(Streptococcus dysgalactiae ATCC 12394)

6e-34

115) irr
( YP_006859544.1 )

two-component response regulator

NC_018712
(Streptococcus dysgalactiae RE378)

6e-34

116) irr
( YP_006933783.1 )

response regulator

NC_018936
(Streptococcus pyogenes A20)

6e-34

117) SPYALAB49_001707
( YP_006072826.1 )

response regulator

NC_017596
(Streptococcus pyogenes Alab49)

6e-34

118) L897_08600
( YP_008243959.1 )

chemotaxis protein CheY

NC_021807
(Streptococcus pyogenes HSC5)

6e-34

119) ir
( YP_007588282.1 )

two-component response regulator

NC_020540
(Streptococcus pyogenes M1 476)

6e-34

120) SpyM51688
( YP_001129204.1 )

response regulator protein

NC_009332
(Streptococcus pyogenes Manfredo)

6e-34

121) irr
( YP_599400.1 )

Two-component response regulator

NC_008022
(Streptococcus pyogenes MGAS10270)

6e-34

122) M6_Spy1725
( YP_061043.1 )

two-component response regulator

NC_006086
(Streptococcus pyogenes MGAS10394)

6e-34

123) irr
( YP_603310.1 )

two-component response regulator

NC_008024
(Streptococcus pyogenes MGAS10750)

6e-34

124) irr
( YP_005389576.1 )

TCS signal tranduction response regulator Irr

NC_017040
(Streptococcus pyogenes MGAS15252)

6e-34

125) irr
( YP_005412339.1 )

TCS signal tranduction response regulator Irr

NC_017053
(Streptococcus pyogenes MGAS1882)

6e-34

126) irr
( YP_601349.1 )

two-component response regulator

NC_008023
(Streptococcus pyogenes MGAS2096)

6e-34

127) SpyM3_1733
( NP_665537.1 )

two-component response regulator

NC_004070
(Streptococcus pyogenes MGAS315)

6e-34

128) irr
( YP_283088.1 )

two-component response regulator

NC_007297
(Streptococcus pyogenes MGAS5005)

6e-34

129) irr
( YP_281174.1 )

two-component response regulator

NC_007296
(Streptococcus pyogenes MGAS6180)

6e-34

130) spyM18_2084
( NP_608052.1 )

two-component response regulator

NC_003485
(Streptococcus pyogenes MGAS8232)

6e-34

131) irr
( YP_597461.1 )

two-component response regulator

NC_008021
(Streptococcus pyogenes MGAS9429)

6e-34

132) Spy49_1677c
( YP_002286626.1 )

two-component system response regulator

NC_011375
(Streptococcus pyogenes NZ131)

6e-34

133) SPy_2027
( NP_269978.1 )

two-component response regulator

NC_002737
(Streptococcus pyogenes SF370)

6e-34

134) SPs1730
( NP_802992.1 )

two-component response regulator

NC_004606
(Streptococcus pyogenes SSI-1)

6e-34

135) COB47_0246
( YP_003839586.1 )

winged helix family two component transcriptional regulator

NC_014392
(Caldicellulosiruptor obsidiansis OB47)

1e-33

136) phoP
( YP_253147.1 )

alkaline phosphatase synthesis transcriptional regulatory protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

1e-33

137) BcerKBAB4_4419
( YP_001647206.1 )

two component transcriptional regulator

NC_010184
(Bacillus weihenstephanensis KBAB4)

7e-34

138) Cyan7425_2927
( YP_002483628.1 )

winged helix family two component transcriptional regulator

NC_011884
(Cyanothece sp. PCC 7425)

2e-33

139) Bcer98_3274
( YP_001376488.1 )

two component transcriptional regulator

NC_009674
(Bacillus cytotoxicus NVH 391-98)

2e-33

140) phoP
( YP_002868868.1 )

DNA-binding response regulator PhoP

NC_012659
(Bacillus anthracis A0248)

2e-33

141) phoP
( NP_847036.1 )

DNA-binding response regulator PhoP

NC_003997
(Bacillus anthracis Ames)

2e-33

142) phoP
( YP_021478.1 )

DNA-binding response regulator PhoP

NC_007530
(Bacillus anthracis Ames Ancestor)

2e-33

143) phoP
( YP_002817382.1 )

DNA-binding response regulator PhoP

NC_012581
(Bacillus anthracis CDC 684)

2e-33

144) H9401_4612
( YP_006211666.1 )

Alkaline phosphatase synthesis response regulator

NC_017729
(Bacillus anthracis H9401)

2e-33

145) BAS4484
( YP_030731.1 )

DNA-binding response regulator PhoP

NC_005945
(Bacillus anthracis Sterne)

2e-33

146) phoP
( YP_002751944.1 )

DNA-binding response regulator PhoP

NC_012472
(Bacillus cereus 03BB102)

2e-33

147) phoP
( YP_002340638.1 )

DNA-binding response regulator PhoP

NC_011658
(Bacillus cereus AH187)

2e-33

148) phoP
( YP_002453650.1 )

DNA-binding response regulator PhoP

NC_011773
(Bacillus cereus AH820)

2e-33

149) phoP
( NP_981013.1 )

DNA-binding response regulator PhoP

NC_003909
(Bacillus cereus ATCC 10987)

2e-33

150) BC4589
( NP_834295.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_004722
(Bacillus cereus ATCC 14579 )

2e-33

151) phoP
( YP_002369385.1 )

DNA-binding response regulator PhoP

NC_011725
(Bacillus cereus B4264)

2e-33

152) phoP2
( YP_003794305.1 )

alkaline phosphatase synthesis response regulator

NC_014335
(Bacillus cereus CI)

2e-33

153) phoP
( YP_085909.1 )

alkaline phosphatase synthesis response regulator

NC_006274
(Bacillus cereus E33L)

2e-33

154) bcf_22985
( YP_005121229.1 )

Alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_016779
(Bacillus cereus F837/76)

2e-33

155) BCK_12275
( YP_006596556.1 )

DNA-binding response regulator PhoP

NC_018491
(Bacillus cereus FRI-35)

2e-33

156) phoP
( YP_002448153.1 )

DNA-binding response regulator PhoP

NC_011772
(Bacillus cereus G9842)

2e-33

157) HD73_4884
( YP_007423983.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_020238
(Bacillus cereus HD73)

2e-33

158) BCN_4489
( YP_005107022.1 )

DNA-binding response regulator PhoP

NC_016771
(Bacillus cereus NC7401)

2e-33

159) phoP
( YP_002532107.1 )

DNA-binding response regulator phop

NC_011969
(Bacillus cereus Q1)

2e-33

160) phoP
( YP_038634.1 )

alkaline phosphatase synthesis response regulator

NC_005957
(Bacillus thuringiensis 97-27)

2e-33

161) phoP
( YP_896887.1 )

alkaline phosphatase synthesis response regulator

NC_008600
(Bacillus thuringiensis Al Hakam)

2e-33

162) phoP
( YP_003666761.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_014171
(Bacillus thuringiensis BMB171)

2e-33

163) phoP2
( YP_006929356.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_018877
(Bacillus thuringiensis Bt407)

2e-33

164) phoP
( YP_005574559.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_017208
(Bacillus thuringiensis CT-43)

2e-33

165) BTG_25920
( YP_006606620.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_018500
(Bacillus thuringiensis HD-771)

2e-33

166) BTF1_21485
( YP_006612386.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_018508
(Bacillus thuringiensis HD-789)

2e-33

167) H175_ch4682
( YP_007481140.1 )

Alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_020376
(Bacillus thuringiensis IS5056)

2e-33

168) YBT020_22565
( YP_005568159.1 )

DNA-binding response regulator PhoP

NC_017200
(Bacillus thuringiensis YBT-020)

2e-33

169) Clocl_1711
( YP_005046247.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_016627
(Clostridium clariflavum DSM 19732)

5e-33

170) Apre_1374
( YP_003153118.1 )

winged helix family two component transcriptional regulator

NC_013171
(Anaerococcus prevotii DSM 20548)

5e-33

171) Cthe_1600
( YP_001038019.1 )

two component transcriptional regulator

NC_009012
(Clostridium thermocellum ATCC 27405)

6e-33

172) STH750
( YP_074579.1 )

two-component response regulator

NC_006177
(Symbiobacterium thermophilum IAM 14863)

1e-32

173) Cbei_1731
( YP_001308859.1 )

two component transcriptional regulator

NC_009617
(Clostridium beijerinckii NCIMB 8052)

7e-33

174) MC28_3867
( YP_006830688.1 )

export protein for polysaccharides and teichoic acids

NC_018693
(Bacillus thuringiensis MC28)

9e-33

175) Aaci_2264
( YP_003185662.1 )

winged helix family two component transcriptional regulator

NC_013205
(Alicyclobacillus acidocaldarius DSM 446)

1e-32

176) GYMC10_2166
( YP_003242254.1 )

winged helix family two component transcriptional regulator

NC_013406
(Paenibacillus sp. Y412MC10)

1e-32

177) Eab7_2024
( YP_006791735.1 )

hypothetical protein

NC_018665
(Exiguobacterium antarcticum Eab7)

2e-32

178) LEUM_1810
( YP_819270.1 )

DNA-binding response regulator

NC_008531
(Leuconostoc mesenteroides ATCC 8293)

2e-32

179) MI1_07875
( YP_005174983.1 )

DNA-binding response regulator

NC_016805
(Leuconostoc mesenteroides J18)

2e-32

180) ANT_22660
( YP_004174892.1 )

OmpR family two-component response regulator

NC_014960
(Anaerolinea thermophila UNI-1)

3e-32

181) Toce_1455
( YP_003825830.1 )

two component transcriptional regulator, winged helix family

NC_014377
(Thermosediminibacter oceani DSM 16646)

8e-32

182) BN6_74520
( YP_007041552.1 )

Two-component system, response regulator of the winged helix family

NC_019673
(Saccharothrix espanaensis DSM 44229)

1e-31

183) Thal_0320
( YP_003473082.1 )

transcriptional regulator

NC_013894
(Thermocrinis albus DSM 14484)

2e-31

184) SEQ_1549
( YP_002746806.1 )

alkaline phosphatase synthesis transcriptional regulatory protein

NC_012471
(Streptococcus equi 4047)

3e-31

185) phoB1
( YP_006043340.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_017582
(Streptococcus equi ATCC 35246)

3e-31

186) SZO_06010
( YP_002744152.1 )

alkaline phosphatase synthesis transcriptional regulatory protein

NC_012470
(Streptococcus equi H70)

3e-31

187) EAT1b_0324
( YP_002884702.1 )

two component transcriptional regulator, winged helix family

NC_012673
(Exiguobacterium sp. AT1b)

4e-31

188) Dacsa_0514
( YP_007170655.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019780
(Dactylococcopsis salina PCC 8305)

1e-30

189) phoP
( YP_006904175.1 )

transcriptional regulator ycf27

NC_019042
(Streptococcus dysgalactiae AC-2713)

1e-30

190) SDE12394_02985
( YP_006012702.1 )

alkaline phosphatase synthesis transcriptional regulatory proteinphoP

NC_017567
(Streptococcus dysgalactiae ATCC 12394)

1e-30

191) phoP
( YP_002996305.1 )

two-component response regulator

NC_012891
(Streptococcus dysgalactiae GGS_124)

1e-30

192) phoP
( YP_006859215.1 )

two-component response regulator

NC_018712
(Streptococcus dysgalactiae RE378)

1e-30

193) Slip_0097
( YP_003701462.1 )

winged helix family two component transcriptional regulator

NC_014220
(Syntrophothermus lipocalidus DSM 12680)

2e-30

194) phoB
( YP_004897386.1 )

two-component system transcriptional regulator

NC_016077
(Acidaminococcus intestini RyC-MR95)

2e-30

195) Ferpe_0988
( YP_005471217.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_017095
(Fervidobacterium pennivorans DSM 9078)

2e-30

196) phoP1
( YP_004201569.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_014974
(Thermus scotoductus SA-01)

2e-30

197) AXY_06550
( YP_006844549.1 )

two-component system response regulator

NC_018704
(Amphibacillus xylanus NBRC 15112)

4e-30

198) cusR
( YP_003797222.1 )

transcriptional regulatory protein CusR

NC_014355
(Candidatus Nitrospira defluvii )

4e-30

199) Mesil_0142
( YP_003683595.1 )

winged helix family two component transcriptional regulator

NC_014212
(Meiothermus silvanus DSM 9946)

1e-29

200) Gobs_2351
( YP_003409398.1 )

winged helix family two component transcriptional regulator

NC_013757
(Geodermatophilus obscurus DSM 43160)

1e-29

201) UWK_01389
( YP_007467602.1 )

CheY-like receiver and winged-helix DNA-binding domain-containing response regulator

NC_020304
(Desulfocapsa sulfexigens DSM 10523)

7e-30

202) CKL_2350
( YP_001395733.1 )

transcriptional regulator

NC_009706
(Clostridium kluyveri DSM 555)

8e-30

203) CKR_2070
( YP_002472535.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

8e-30

204) Cphy_2827
( YP_001559926.1 )

two component transcriptional regulator

NC_010001
(Clostridium phytofermentans ISDg)

2e-29

205) Desde_1577
( YP_006429775.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_018017
(Desulfitobacterium dehalogenans ATCC 51507)

2e-29

206) Mahau_0744
( YP_004462766.1 )

winged helix family two component transcriptional regulator

NC_015520
(Mahella australiensis 50-1 BON)

2e-29

207) CYB_2856
( YP_479038.1 )

DNA-binding response regulator

NC_007776
(Synechococcus sp. JA-2-3B'a(2-13))

3e-29

208) RUM_03870
( YP_007828630.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021039
(Ruminococcus champanellensis 18P13)

5e-29

209) Krad_3815
( YP_001363542.1 )

winged helix family two component transcriptional regulator

NC_009664
(Kineococcus radiotolerans SRS30216)

5e-29

210) Sulac_0734
( YP_005255913.1 )

winged helix family two component transcriptional regulator

NC_016884
(Sulfobacillus acidophilus DSM 10332)

8e-29

211) vicR
( YP_004719432.1 )

two component transcriptional regulator

NC_015757
(Sulfobacillus acidophilus TPY)

8e-29

212) Syncc9605_1618
( YP_381922.1 )

two component transcriptional regulator

NC_007516
(Synechococcus sp. CC9605)

1e-28

213) phoP
( YP_006919225.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_018870
(Thermacetogenium phaeum DSM 12270)

2e-28

214) CCU_10100
( YP_007796056.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021018
(Coprococcus sp. ART55/1)

3e-28

215) Desku_2766
( YP_004518081.1 )

winged helix family two component transcriptional regulator

NC_015573
(Desulfotomaculum kuznetsovii DSM 6115)

3e-28

216) ROP_pROB01-01890
( YP_002776540.1 )

putative OmpR family two-component response regulator

NC_012520
(Rhodococcus opacus B4)

3e-28

217) Cbei_3359
( YP_001310441.1 )

two component transcriptional regulator

NC_009617
(Clostridium beijerinckii NCIMB 8052)

5e-28

218) RTO_22740
( YP_007787283.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021015
([Ruminococcus] torques L2-14)

1e-27

219) BCK_11070
( YP_006596319.1 )

DNA-binding response regulator

NC_018491
(Bacillus cereus FRI-35)

1e-27

220) BCE_4969
( NP_981262.1 )

DNA-binding response regulator

NC_003909
(Bacillus cereus ATCC 10987)

2e-27

221) YBT020_23760
( YP_005568398.1 )

two-component response regulator

NC_017200
(Bacillus thuringiensis YBT-020)

2e-27

222) BCAH187_A4952
( YP_002340873.1 )

DNA-binding response regulator

NC_011658
(Bacillus cereus AH187)

3e-27

223) BCN_4728
( YP_005107261.1 )

DNA-binding response regulator

NC_016771
(Bacillus cereus NC7401)

3e-27

224) BCQ_4626
( YP_002532341.1 )

two-component response regulator

NC_011969
(Bacillus cereus Q1)

3e-27

225) AM1_4053
( YP_001518350.1 )

two-component transcriptional regulator

NC_009925
(Acaryochloris marina MBIC11017)

4e-27

226) SC8F4.07
( NP_629542.1 )

two-component system response regulator

NC_003888
(Streptomyces coelicolor A3(2))

4e-27

227) Dtur_0537
( YP_002352441.1 )

winged helix family two component transcriptional regulator

NC_011661
(Dictyoglomus turgidum DSM 6724)

6e-27

228) Dacsa_1571
( YP_007171606.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019780
(Dactylococcopsis salina PCC 8305)

6e-27

229) CYA_1033
( YP_474491.1 )

DNA-binding response regulator

NC_007775
(Synechococcus sp. JA-3-3Ab)

6e-27

230) Cyagr_1052
( YP_007045574.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019675
(Cyanobium gracile PCC 6307)

1e-26

231) BC4810
( NP_834510.1 )

two-component response regulator

NC_004722
(Bacillus cereus ATCC 14579 )

7e-27

232) BCB4264_A4937
( YP_002369621.1 )

DNA-binding response regulator

NC_011725
(Bacillus cereus B4264)

8e-27

233) ELI_1637
( YP_003959586.1 )

response regulator

NC_014624
(Eubacterium limosum KIST612)

1e-26

234) Athe_0280
( YP_002572201.1 )

winged helix family two component transcriptional regulator

NC_012034
(Caldicellulosiruptor bescii DSM 6725)

2e-26

235) Marky_0243
( YP_004367114.1 )

two component transcriptional regulator, winged helix family

NC_015387
(Marinithermus hydrothermalis DSM 14884)

8e-26

236) TSC_c17350
( YP_004202898.1 )

DNA-binding response regulator

NC_014974
(Thermus scotoductus SA-01)

8e-26

237) Gura_2556
( YP_001231307.1 )

two component transcriptional regulator

NC_009483
(Geobacter uraniireducens Rf4)

1e-25

238) Mrub_0302
( YP_003506100.1 )

winged helix family two component transcriptional regulator

NC_013946
(Meiothermus ruber DSM 1279)

2e-25

239) K649_01130
( YP_007879031.1 )

winged helix family two component transcriptional regulator

NC_021081
(Meiothermus ruber DSM 1279)

2e-25

240) Gura_1572
( YP_001230341.1 )

two component transcriptional regulator

NC_009483
(Geobacter uraniireducens Rf4)

2e-25

241) COB47_0270
( YP_003839603.1 )

winged helix family two component transcriptional regulator

NC_014392
(Caldicellulosiruptor obsidiansis OB47)

3e-25

242) Desaf_0871
( YP_005050878.1 )

two component transcriptional regulator, winged helix family

NC_016629
(Desulfovibrio africanus Walvis Bay)

3e-25

243) GAU_2013
( YP_002761525.1 )

OmpR family two-component response regulator

NC_012489
(Gemmatimonas aurantiaca T-27)

4e-25

244) Moth_1131
( YP_429988.1 )

two component transcriptional regulator

NC_007644
(Moorella thermoacetica ATCC 39073)

1e-24

245) Deipr_2674
( YP_004257035.1 )

two component transcriptional regulator, winged helix family

NC_015163
(Deinococcus proteolyticus MRP)

9e-25

246) ECL_04562
( YP_003615040.1 )

DNA-binding transcriptional regulator BasR

NC_014121
(Enterobacter cloacae ATCC 13047)

3e-24

247) phoB
( YP_006034757.1 )

OmpR family two component system phosphate regulon response regulator

NC_017576
(Streptococcus gallolyticus ATCC 43143)

5e-24

248) phoB
( YP_004288827.1 )

phosphate regulon response regulator PhoB

NC_015215
(Streptococcus gallolyticus ATCC BAA-2069)

5e-24

249) phoB
( YP_003431369.1 )

phosphate regulon response regulator PhoB

NC_013798
(Streptococcus gallolyticus UCN34)

5e-24

250) Shel_18040
( YP_003144171.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_013165
(Slackia heliotrinireducens DSM 20476)

5e-24

251) Moth_1478
( YP_430331.1 )

two component transcriptional regulator

NC_007644
(Moorella thermoacetica ATCC 39073)

8e-24

252) NH44784_033551
( YP_008030437.1 )

Two-component system response regulator QseB

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

1e-23

253) Desku_2044
( YP_004517400.1 )

winged helix family two component transcriptional regulator

NC_015573
(Desulfotomaculum kuznetsovii DSM 6115)

2e-23

254) SFUL_3754
( YP_007932557.1 )

Two-component system response regulator

NC_021177
(Streptomyces fulvissimus DSM 40593)

3e-23

255) Psed_5946
( YP_004335921.1 )

winged helix family two component transcriptional regulator

NC_015312
(Pseudonocardia dioxanivorans CB1190)

4e-23

256) Ethha_1035
( YP_004091319.1 )

two component transcriptional regulator, winged helix family

NC_014828
(Ethanoligenens harbinense YUAN-3)

2e-22

257) LMKG_02720
( YP_005969384.1 )

DNA-binding response regulator

NC_017546
(Listeria monocytogenes FSL R2-561)

1e-22

258) COB47_1067
( YP_003840352.1 )

winged helix family two component transcriptional regulator

NC_014392
(Caldicellulosiruptor obsidiansis OB47)

3e-21

259) Ent638_3617
( YP_001178325.1 )

DNA-binding transcriptional regulator BasR

NC_009436
(Enterobacter sp. 638)

8e-21

260) Calla_0857
( YP_004798485.1 )

winged helix family two component transcriptional regulator

NC_015949
(Caldicellulosiruptor lactoaceticus 6A)

2e-20

261) Calkr_1472
( YP_004026587.1 )

two component transcriptional regulator, winged helix family

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

2e-20

262) FMG_0591
( YP_001691899.1 )

two-component response regulator

NC_010376
(Finegoldia magna ATCC 29328)

4e-20

263) CYB_0249
( YP_476510.1 )

DNA-binding response regulator RpaA

NC_007776
(Synechococcus sp. JA-2-3B'a(2-13))

4e-20

264) phoB
( YP_007600347.1 )

phosphate regulon response regulator

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

2e-18

265) HCN_0446
( YP_006234853.1 )

phosphate regulon response regulator PhoB

NC_017761
(Helicobacter cinaedi PAGU611)

2e-18

266) Ocepr_0547
( YP_004057178.1 )

winged helix family two component transcriptional regulator

NC_014761
(Oceanithermus profundus DSM 14977)

6e-18

267) Ththe16_0241
( YP_005639799.1 )

winged helix family two component transcriptional regulator

NC_017272
(Thermus thermophilus SG0.5JP17-16)

1e-16

268) phoB
( YP_005818.1 )

phosphate regulon transcriptional regulatory protein phoB

NC_005835
(Thermus thermophilus HB27)

2e-16

269) TTHA0145
( YP_143411.1 )

phosphate regulon transcriptional regulatory protein PhoB

NC_006461
(Thermus thermophilus HB8)

2e-16

270) TtJL18_1857
( YP_006059507.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_017587
(Thermus thermophilus JL-18)

2e-16

271) O3I_005825
( YP_006806102.1 )

two-component system response regulator

NC_018681
(Nocardia brasiliensis HUJEG-1)

3e-15

• Sequence Alignments

1) vanRB in NC_004668


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  360 bits (1351),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 220/220 (100%), Positives = 220/220 (100%), Gaps = 0/220 (0%)

Query  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60
            MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120
            GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180
            GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEESL  220
            YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEESL
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEESL  220

2) vanRB in NC_017022


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  345 bits (1296),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 211/219 (97%), Positives = 216/219 (99%), Gaps = 0/219 (0%)

Query  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60
            MSIRILLVEDDDHICNTVRAFLAEA Y+VDACTDGNEA TKFYENTYQLVILDIMLPGMN
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120
            GHELLREFRA+NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKM+ILLKRVEALLRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180
            GALAKE+RVGRLTLLPEDF VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219
            YDF+GDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

3) vanRB in NC_021994


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  345 bits (1296),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 211/219 (97%), Positives = 216/219 (99%), Gaps = 0/219 (0%)

Query  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60
            MSIRILLVEDDDHICNTVRAFLAEA Y+VDACTDGNEA TKFYENTYQLVILDIMLPGMN
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120
            GHELLREFRA+NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKM+ILLKRVEALLRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180
            GALAKE+RVGRLTLLPEDF VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219
            YDF+GDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

4) BCAH820_3209 in NC_011773


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  308 bits (1156),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 177/219 (81%), Positives = 206/219 (95%), Gaps = 0/219 (0%)

Query  1    MDIRILLVEDDEHICNAVKVFLSGAGYKVDACFNGDEAHTKFYDNTYQLVILDILLPGMN  60
            M IRILLVEDD+HICN+V+ FL+ A Y VDAC +G+EAHTKFY+NTYQLVILDI+LPGMN
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GHELLREFRKLNNTPVLMMTALSDDENQIRAFDAEADDYVTKPFKIQLLLKRVEALLRRS  120
            GHELLREFR  N+TP+LMMTALSDDENQIRAFDAEADDYVTKPFK+++LLKRVEALLRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  GAVAKELHYGKLTILPEDFKVFYDDEELLLTLKEFEILMLLVQNNGRTLSHEVILSRVWG  180
            GA+AKE++ G+LT+LPEDF+V+ D+ EL LT KEFEIL+LLVQN+GRTL+HE+ILSR+WG
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFDGDGSTVHTHIKNLRAKLPDNIIKTVRGVGYRLEET  219
            YDFDGDGSTVHTHIKNLRAKLP+NIIKT+RGVGYRLEE+
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

5) Pjdr2_3220 in NC_012914


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  305 bits (1142),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 178/219 (82%), Positives = 200/219 (92%), Gaps = 0/219 (0%)

Query  1    MDIRILLVEDDEHIGNTVKTFLIEAGYKVDVCINGIEAYTNFYNHTYQLVILDIMLPGMS  60
            M IRILLVEDD+HI NTV++FL EA Y VD C +G EA T+FY++TYQLVILDIMLPGM+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GHELLREFRKRNNTPILMMTALSDDENQIKAFDAEADDYVTKPFKIQLLLKRVGALLRRS  120
            GHELLREFR +N+TPILMMTALSDDENQI+AFDAEADDYVTKPFK+++LLKRV ALLRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  GALAKEIRCSNLTILPDDFRALYDGVELPLTLKEFEILMLLVQNKGRTLSHEIILSRVWG  180
            GALAKE+R + LT+LP+DFR L DG ELPLT KEFEIL+LLVQNKGRTL+HEIILSR+WG
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFDGDGSTVHTHIKNLRAKLPENMIKTARGVGYRLEED  219
            YDFDGDGSTVHTHIKNLRAKLPEN+IKT RGVGYRLEE 
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

6) MC28_G291 in NC_018689


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 91/217 (42%), Positives = 156/217 (72%), Gaps = 2/217 (0%)

Query  12   HILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQFNKQSFDLILLDVMMPNLNGFE  71
            +IL+VEDD++I + ++ FL   +Y V   +DG E+  +F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  72   VAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRRSNNQ  131
            + + +R+Q++ PI+M+TAL ++++Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  132  ITDNHFVFRELHVNGDAYKVYVNKVEVPLTTKEFEILQLLLQNEKKVLTRENIVEKIWGY  191
              +  F    L +  + ++V  +  E+PLT KEFEIL LL+QN  + LT+E I+ +IWGY
Sbjct  124  AKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  192  EYAGDTRMIDTHMKNIRKKLDIPYIKTVKGIGYKIDE  228
            ++ GD   ++TH+KN+R KL    IKT++G+GY+++E
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

7) CBF_2020 in NC_017297


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  170 bits (627),  Expect = 9e-44, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+ Y V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R ++  PI+M+TAL+++E+++++F+   DDY+TKPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNAGRVFSRESLLNQ  180
             +L  +   +    +T+ P +++ L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

8) CLI_2035 in NC_009699


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  170 bits (627),  Expect = 9e-44, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+ Y V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R ++  PI+M+TAL+++E+++++F+   DDY+TKPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNAGRVFSRESLLNQ  180
             +L  +   +    +T+ P +++ L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

9) H04402_01993 in NC_017299


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  169 bits (625),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+ Y V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSISLLIKRVEAVLRRA  120
            G  +   +R ++  PI+M+TAL+++E+++++F+   DDY+TKPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P +++ L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

10) CLM_2186 in NC_012563


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  168 bits (622),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+ Y V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R ++  PI+M+TAL+++E+++++F+   DDY+TKPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILMSNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P +++ L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

11) CLB_1908 in NC_009697


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  168 bits (623),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+ Y V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R ++  PI+M+TAL+++E+++++F+   DDY+TKPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P +++ L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

12) CBO1968 in NC_009495


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  168 bits (623),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+ Y V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R ++  PI+M+TAL+++E+++++F+   DDY+TKPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P +++ L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

13) CLC_1914 in NC_009698


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  168 bits (623),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+ Y V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R ++  PI+M+TAL+++E+++++F+   DDY+TKPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P +++ L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

14) CLD_2656 in NC_010516


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  168 bits (620),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRWNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+ Y V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R ++  PI+M+TAL+++E+++++F+   DDY+TKPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNAGRVFSRESLLNQ  180
             +L  +   +    +T+ P +++ L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

15) CLJ_B2174 in NC_012658


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  167 bits (619),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 154/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKKILVVEDDFDIQTIISEVLKESGYLVEEATDGLMAVEMFREGNFDLIILDVMLPKID  60
            M+ +IL+VEDD +I   +   L E+ Y V+  TDG  A   F E  ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMRGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R ++  PI+M+TAL+++E+++R+F+   DDY+TKPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYLSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+   +++ L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLSIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL+ + IKTIRGVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

16) BcerKBAB4_5471 in NC_010180


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  167 bits (619),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 147/200 (74%), Gaps = 2/200 (1%)

Query  5    HILVIEDDQEIQELIKQFLLTQQYTVEVASDGLEGMIQFNKQSFDLILLDVMMPNLNGFE  64
            +IL++EDD++I + ++ FL   +Y V+  +DG E+  +F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VAKMIRSQSNVPVIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSNDK  124
            + + +R+Q++ P++M+TAL ++++Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG--  121

Query  125  SLDNHFVFKELRVDVDAYKVYVNEVEISLTTKEFEILQLLLQNEKRVLPRESIVEKVWGY  184
            +L ++F    L +  + ++V  +  E++LT KEFEIL LL+QN  R L +E I+ ++WGY
Sbjct  122  ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  DYIGESRIIDTHMKNIRKKL  204
            D+ G++  ++TH+KN+R KL
Sbjct  182  DFDGDGSTVHTHIKNLRAKL  201

17) CLK_1423 in NC_010520


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  167 bits (617),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 94/220 (43%), Positives = 152/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGEFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+ Y V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYIIKPFSINLLIKRVEAVLRRA  120
            G  +   +R ++  PI+M+TAL+++E+++++F+   DDY+ KPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P +++ L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

18) Nther_0984 in NC_010718


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  165 bits (610),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 107/242 (45%), Positives = 158/242 (66%), Gaps = 27/242 (11%)

Query  3    RILLVEDEHHIAKLVNHNLIKEGYEVEHVTHGDEAFNKYFENDYDLIILDLMLPGLDGLE  62
            RILLVED++HI + V   L    YEV+  T+G+EA  K++EN Y+L+ILD+MLPG++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VCRKIRGNSSLHIPVIMLTAKSDEIEKIVGLEMGADDYVTKPFSPRELLARVKAQLRGRT  122
            + R +R+++  + P++M+TA SD+ ++I +++  ADDYVTKPF  R LL RV A LR R+
Sbjct  64   LLREFRAQN--DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLR-RS  120

Query  123  KELTDEKSQDNSNKIFDQRDKSEDVKKNGPLSIKPEKYRAYIENQELQLTPKEFELLNIM  182
              L+ E         F          + G L++ PE +R   +  EL LT KEFE+L ++
Sbjct  121  GALAKE---------F----------RVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLL  161

Query  183  VTNSGQVLTREKLLEKIWGYDFLGDTRTVDVHIRHLRQKISEAGGPPDLVETVRGIGYRL  242
            V N G+ LT+E +L +IWGYDF GD  TV+ HI++LR K+     P +++ T+RG+GYRL
Sbjct  162  VQNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKL-----PENIIKTIRGVGYRL  216

Query  243  KE  244
             E
Sbjct  217  EE  218

19) OmpR2 in NC_003909


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 95/217 (44%), Positives = 159/217 (74%), Gaps = 2/217 (0%)

Query  5    HILVVEDDQEIQELIKQFLMTQQYTVVVASDGLEGMTQFNKQSFDLVLLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL   +Y V   +DG E+ T+F  ++++LV+LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VAKMIRSQSNIPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDN  124
            + + +R+Q++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEvridvdayrvyvddvEIFLTTKEFEILQLLFQNERKVLTRENIVEKVWGY  184
             + +++    + +  + +RV  D+ E+ LT KEFEIL LL QN  + LT+E I+ ++WGY
Sbjct  122  ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  DYFGETRIIDTHIKNLRKKLAIPYIKTIKGIGYKVDE  221
            D+ G+   ++THIKNLR KL+   IKTI+G+GY+++E
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

20) CTC00189 in NC_004557


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 154/220 (70%), Gaps = 6/220 (2%)

Query  25   KILIVDDDQNICEVIKMYLESAGFDTRVCHDGKESQSIFIEYNPDLVLLDIMLPSMDGID  84
            +IL+V+DD++IC+ ++ +L  A ++   C DG+E+++ F E   +LV+LDIMLP+M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  85   VLKWIRKEHETPVIMLTAKGETFDKVLGLELGADDYMVKPFEPKELLARVKAVLRRFNSD  144
            +L+ +R +++TP++M+TA ++  +++ +++  ADDY+ KPF  + LL RV A+LRR  S+
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR--SG  121

Query  145  NVSKEALQFNGLTIDIDSYTVIYNGKEIKMPPKEFELLYYLASNKNRVFTREQLLCEVWG  204
             ++KE ++   LT+  + + V+ +G E+ +  KEFE+L  L  NK R +T+E +L  +WG
Sbjct  122  ALAKE-FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  205  YDYPGDSRTVDVHIKRLREKLEEGSNWQIETVWGVGYKFE  244
            YD+ GD+ TV+ HIK LR KL E     I T++GVGY++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENI---IKTIRGVGYRLE  217

21) Bcer98_3617 in NC_009674


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  164 bits (605),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 89/219 (41%), Positives = 151/219 (69%), Gaps = 4/219 (1%)

Query  3    HILVIEDNPDIQELIREFLTAQNYKVDVAGTGTEGILLFQKNLYDLVLLDVMLPDIDGYS  62
            +IL++ED+ +I + +R FL+   Y VD    G E+   F  N Y+LV+LD+MLP+++G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   ICKIIRGQSDVPIIMLTGLQNEENEIKGFELGVDDYITKPFHYAIFIKRVEAVLRRAAST  122
            + + +R+Q+D PI+M+T+L ++EN+I++F+   DDY+TKPF   I++KRVEA+LRR+++ 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EVENANILQFHELMLNSTAYAAYVNGDQVELTTKEFEIIYTLLQNRGKVLSRSDLLNKVW  182
              E    ++   L L +  +    +G ++ LT KEFEI+  L+QN+G+ L++  +L+++W
Sbjct  124  AKE----FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYEHYGDVRVIDTHIKNLRKKLCIPYIKTVKGIGYKIDS  221
            GY+  GD   ++THIKNLR KL    IKT++G+GY+++ 
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

22) CD630_21140 in NC_009089


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  163 bits (602),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 94/222 (43%), Positives = 150/222 (68%), Gaps = 2/222 (0%)

Query  1    MNSSILVIEDDSNIQELISEFLSAEGYQVDTANDGLEGIQKFKQGSYDLVILDIMMPNLD  60
            M+  IL++EDD +I + +  FL+   Y+VD+  DG E+  KF + +Y+LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GYGVCKMIRKSSSVPIIFLTALNDEGDQLKGFDLECDDYITKPFSFNLLIKRVEAILRRS  120
            G  + + +R  +  PI+ +TAL+D+ +Q+++FD E DDY+TKPF   +L+KRVEA+LRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NKTINDKFIVFEKLKLDLNTYIAEIDGEPIELTLKEFNILKALIEKYPQVITREGLLDSI  180
              ++   F V  +L L  + +    DG  + LT KEF+IL  L+++  + +T+E +L  I
Sbjct  121  G-ALAKEFRV-GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYYGDTRIVDAHIKNIRKKISLPYIKTVKGIGYTLEKDI  222
            WGYD+ GD   V++HIKN+R K++   IKT++G+GY LE  +
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEESL  220

23) CDBI1_10225 in NC_017179


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  163 bits (602),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 94/222 (43%), Positives = 150/222 (68%), Gaps = 2/222 (0%)

Query  1    MNSSILVIEDDSNIQELISEFLSAEGYQVDTANDGLEGIQKFKQGSYDLVILDIMMPNLD  60
            M+  IL++EDD +I + +  FL+   Y+VD+  DG E+  KF + +Y+LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GYGVCKMIRKSSSVPIIFLTALNDEGDQLKGFDLECDDYITKPFSFNLLIKRVEAILRRS  120
            G  + + +R  +  PI+ +TAL+D+ +Q+++FD E DDY+TKPF   +L+KRVEA+LRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NKTINDKFIVFEKLKLDLNTYIAEIDGEPIELTLKEFNILKALIEKYPQVITREGLLDSI  180
              ++   F V  +L L  + +    DG  + LT KEF+IL  L+++  + +T+E +L  I
Sbjct  121  G-ALAKEFRV-GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYYGDTRIVDAHIKNIRKKISLPYIKTVKGIGYTLEKDI  222
            WGYD+ GD   V++HIKN+R K++   IKT++G+GY LE  +
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEESL  220

24) CD196_1978 in NC_013315


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  163 bits (602),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 94/222 (43%), Positives = 150/222 (68%), Gaps = 2/222 (0%)

Query  1    MNSSILVIEDDSNIQELISEFLSAEGYQVDTANDGLEGIQKFKQGSYDLVILDIMMPNLD  60
            M+  IL++EDD +I + +  FL+   Y+VD+  DG E+  KF + +Y+LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GYGVCKMIRKSSSVPIIFLTALNDEGDQLKGFDLECDDYITKPFSFNLLIKRVEAILRRS  120
            G  + + +R  +  PI+ +TAL+D+ +Q+++FD E DDY+TKPF   +L+KRVEA+LRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NKTINDKFIVFEKLKLDLNTYIAEIDGEPIELTLKEFNILKALIEKYPQVITREGLLDSI  180
              ++   F V  +L L  + +    DG  + LT KEF+IL  L+++  + +T+E +L  I
Sbjct  121  G-ALAKEFRV-GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYYGDTRIVDAHIKNIRKKISLPYIKTVKGIGYTLEKDI  222
            WGYD+ GD   V++HIKN+R K++   IKT++G+GY LE  +
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEESL  220

25) CDR20291_2021 in NC_013316


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  163 bits (602),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 94/222 (43%), Positives = 150/222 (68%), Gaps = 2/222 (0%)

Query  1    MNSSILVIEDDSNIQELISEFLSAEGYQVDTANDGLEGIQKFKQGSYDLVILDIMMPNLD  60
            M+  IL++EDD +I + +  FL+   Y+VD+  DG E+  KF + +Y+LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GYGVCKMIRKSSSVPIIFLTALNDEGDQLKGFDLECDDYITKPFSFNLLIKRVEAILRRS  120
            G  + + +R  +  PI+ +TAL+D+ +Q+++FD E DDY+TKPF   +L+KRVEA+LRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  NKTINDKFIVFEKLKLDLNTYIAEIDGEPIELTLKEFNILKALIEKYPQVITREGLLDSI  180
              ++   F V  +L L  + +    DG  + LT KEF+IL  L+++  + +T+E +L  I
Sbjct  121  G-ALAKEFRV-GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYYGDTRIVDAHIKNIRKKISLPYIKTVKGIGYTLEKDI  222
            WGYD+ GD   V++HIKN+R K++   IKT++G+GY LE  +
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEESL  220

26) BCG9842_B2563 in NC_011772


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  161 bits (595),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 87/203 (43%), Positives = 148/203 (73%), Gaps = 6/203 (2%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL   +Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R+Q++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDV--DAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVW  182
             + ++  F+  R+ +  + +RV  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++W
Sbjct  122  ALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYDYFGETRIIDTHIKNLRKKLA  205
            GYD+ G+   ++THIKNLR KL+
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLP  202

27) vanRB in NC_018877


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  161 bits (595),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 87/203 (43%), Positives = 148/203 (73%), Gaps = 6/203 (2%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL   +Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R+Q++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDV--DAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVW  182
             + ++  F+  R+ +  + +RV  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++W
Sbjct  122  ALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYDYFGETRIIDTHIKNLRKKLA  205
            GYD+ G+   ++THIKNLR KL+
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLP  202

28) BTG_06080 in NC_018500


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  161 bits (595),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 87/203 (43%), Positives = 148/203 (73%), Gaps = 6/203 (2%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL   +Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R+Q++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDV--DAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVW  182
             + ++  F+  R+ +  + +RV  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++W
Sbjct  122  ALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYDYFGETRIIDTHIKNLRKKLA  205
            GYD+ G+   ++THIKNLR KL+
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLP  202

29) BTF1_11125 in NC_018508


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  161 bits (595),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 87/203 (43%), Positives = 148/203 (73%), Gaps = 6/203 (2%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL   +Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R+Q++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDV--DAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVW  182
             + ++  F+  R+ +  + +RV  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++W
Sbjct  122  ALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYDYFGETRIIDTHIKNLRKKLA  205
            GYD+ G+   ++THIKNLR KL+
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLP  202

30) CT43_CH2706 in NC_017208


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  161 bits (595),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 87/203 (43%), Positives = 148/203 (73%), Gaps = 6/203 (2%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL   +Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R+Q++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDV--DAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVW  182
             + ++  F+  R+ +  + +RV  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++W
Sbjct  122  ALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYDYFGETRIIDTHIKNLRKKLA  205
            GYD+ G+   ++THIKNLR KL+
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLP  202

31) H175_ch2755 in NC_020376


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  161 bits (595),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 87/203 (43%), Positives = 148/203 (73%), Gaps = 6/203 (2%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL   +Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R+Q++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDV--DAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVW  182
             + ++  F+  R+ +  + +RV  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++W
Sbjct  122  ALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYDYFGETRIIDTHIKNLRKKLA  205
            GYD+ G+   ++THIKNLR KL+
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLP  202

32) HD73_3280 in NC_020238


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  161 bits (594),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 87/203 (43%), Positives = 148/203 (73%), Gaps = 6/203 (2%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVIVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL   +Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R+Q++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDV--DAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVW  182
             + ++  F+  R+ +  + +RV  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++W
Sbjct  122  ALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYDYFGETRIIDTHIKNLRKKLA  205
            GYD+ G+   ++THIKNLR KL+
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLP  202

33) BTG_10940 in NC_018500


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  161 bits (593),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 89/217 (42%), Positives = 152/217 (71%), Gaps = 2/217 (0%)

Query  5    HILVVENNPKAQKSIKLSLLKQHYTVETAENGIEGLKLFSEKTFDLVLLDVLMPYLNGFE  64
            +IL+VE++    ++++  L   +Y V++  +G E+   F E+T++LV+LD+++P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VAKIIRKQSPVPIIMLTALIDEQNQIRGFNLGIDDYITKPFSYRILISRIQAVLKRSNTR  124
            + + +R Q+  PI+M+TAL D++NQIR+F+   DDY+TKPF  RIL+ R++A+L+RS + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA-  122

Query  125  IMENHLIFKEIHLICDIYKVLVDKNEVMLTKTEFEILQILIRNERKVLTRGQILQEIWGY  184
             + +++    + L+ + ++VL D  E+ LT+ EFEIL +L++N  + LT+  IL  IWGY
Sbjct  123  -LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  NYYGDTKLVDTHIKNIRRKLKVPYIKTINGIGYKMDN  221
            ++ GD   V+THIKN+R KL    IKTI G+GY++++
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

34) Ilyop_1493 in NC_014632


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  160 bits (590),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 97/216 (45%), Positives = 149/216 (69%), Gaps = 1/216 (0%)

Query  3    KILVVEDEWKMRRLIKDYLVKEGYHVDEAGDGMQALEMFQEGGYDLVILDIMLPKMDGWS  62
            +IL+VED+  +   ++ +L    Y+VD   DG +A   F E  Y+LVILDIMLP M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VCREIRRESMVPVIMLTARSEENDQIFGFELEADEYITKPFNPRLLVARIKAIFRRAGKP  122
            + RE+R ++  P++M+TA S++++QI +F+ EAD+Y+TKPF+ R+L+ R+ A++RR+G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  DKISR-GDIEIDEGSRKVEIKGEAVELTSKEFEMLLYFVQNRGIALSREKILNSVWGWDY  181
             K  R G + +     +V   G  + LT KEFE+LL +VQN+G +L++E IL+ +WG D+
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  182  FGDVRTVDTHVKRLRKKIGEIYIQTIRGFGYRFEEG  217
             GD  TV+TH+K LR K+ E  I+TIRG GYR+EE+
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

35) BcerKBAB4_2424 in NC_010184


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  160 bits (590),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 87/203 (43%), Positives = 148/203 (73%), Gaps = 6/203 (2%)

Query  5    HILVVEDDQEIQELIKQFLMTQQYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL   +Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R+Q++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--G  121

Query  125  NVNNHLVFKEVRIDV--DAYRVYVNDVEILLTIKEFEILQLLFQNERKVLTRENIVEKVW  182
             + ++  F+  R+ +  + +RV  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++W
Sbjct  122  ALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYDYFGETRIIDTHIKNLRKKLA  205
            GYD+ G+   ++THIKNLR KL+
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLP  202

36) CC1_16950 in NC_021009


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  159 bits (586),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 94/221 (43%), Positives = 153/221 (70%), Gaps = 5/221 (2%)

Query  3    SLKILVVDDESRMRKLVRDFLTKKGFTVIEAGDGEEAVDKFFEVKDIALIILDVMMPKMD  62
            S++IL+V+D+ ++ + VR FL+   + V    DG+EA  KF+E +   L+ILD+M+P M+
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYE-NTYQLVILDIMLPGMN  60

Query  63   GWQVCREIRQYSKVPIIMLTAKSDEKDELQGFDLGVDEYITKPFSPKILVARVEAILRRS  122
            G ++ RE+R  +  PI+M+TA SD+ +++++FD   D+Y+TKPF  +IL+ RVEA+LRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  123  NVLAADDTMEAGGIELNKAAHEVLIDGKSVELSYKEFELLAYFMSNQGVALSRERILNNV  182
              LA +     G + L      VL DG  + L+ KEFE+L  ++ N+G +L++E IL+ +
Sbjct  121  GALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  183  WNYDYFGDARTIDTHVKKLRSKLGAKGEYIKTIWGMGYKFE  223
            W YD+ GD+ T++TH+K+LR+KL    + IKTI+G+GY++E
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

37) MC28_1918 in NC_018693


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  158 bits (583),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 85/200 (43%), Positives = 145/200 (73%), Gaps = 6/200 (3%)

Query  1    MVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFEVSK  60
            +VEDD++I + ++ FL   +Y V   +DG E+ T+F  ++++L++LD+M+P +NG E+ +
Sbjct  7    LVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHELLR  66

Query  61   MIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDKNVN  120
             +R+Q++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS    + 
Sbjct  67   EFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--GALA  124

Query  121  NHLIFKEVRIDV--DAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVWGYD  178
            ++  F+  R+ +  + +RV  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++WGYD
Sbjct  125  KE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  179  YFGETRIIDTHIKNLRKKLA  198
            + G+   ++THIKNLR KL+
Sbjct  183  FDGDGSTVHTHIKNLRAKLP  202

38) irr in NC_019425


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 145/223 (66%), Gaps = 3/223 (1%)

Query  1    MQKRILVVEDDEMTNKVITNFLAEQNFTVFSALDGQAGWDIFQKETLDLIILDIMLPKID  60
            M  RIL+VEDD+   + +  FLAE  + V +  DG+ +   F  +T +L+ILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GLALLAQFREVSQIPIIMLTALDDEYTQVVSYSNLIDDYVTKPFSPTILVKRVEAVLRRN  120
            G  LL +FR  ++ PI+M+TAL D+  Q+ ++    DDYVTKPF   IL+KRVEA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  VQEEENSGKIKYGELTIDLDACTVENQSEAVNLTKKEYDIVTQLISRKGKVVTREQLMDQ  180
                  +  ++ G LT+  +   V  ++  + LT+KE++I+  L+  KG+ +T+E ++ +
Sbjct  121  ---GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYNPSDRIIDTHIKNIRKKLPGIEIRTVKGTGYAIEAEL  223
            IWGYD++  +  ++THIKN+R KLP   I+T++G GY +E  L
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEESL  220

39) LMOSLCC7179_1041 in NC_018593


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  157 bits (579),  Expect = 5e-40, Method: Compositional matrix adjust.
 Identities = 89/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHIKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++THIKNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

40) ROI_10070 in NC_021040


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  157 bits (578),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 92/224 (42%), Positives = 152/224 (68%), Gaps = 6/224 (2%)

Query  3    KIKILVVDDESRMRKLVRDFLVREDYEVLEAGDGETALDIFYQEKNIALIILDVMMPKMN  62
             I+IL+V+D+ ++ + VR FL    YEV    DG+ A   FY E+   L+ILD+M+P MN
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFY-ENTYQLVILDIMLPGMN  60

Query  63   GWEVCREIRETSKVPIIMLTAKGDEEDELTGFELGVDEYISKPFSPKILVARVGAILRRI  122
            G E+ RE+R  +  PI+M+TA +D+E+++ +F+   D+Y++KPF  +IL+ RV A+LRR 
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  123  GKAPEEGKLLSIGGIVIDQTAHTVTVDGRQIELSFKEFELLTYFMENEGIALSREKILNH  182
            G  + E   + +G + +      V  DG ++ L+ KEFE+L  +++N G +L++E IL++
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  183  VWNYDYFGDARTIDTHVKKLRAKIGEKGDYIKTIWGMGYKFEAE  226
            +W YD+ GD+ T++TH+K+LRAK+ E  + IKTI+G+GY++E  
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEES  219

41) CXIVA_02810 in NC_015737


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 150/222 (68%), Gaps = 5/222 (2%)

Query  4    LKILVVDDEARMRKLVRDFLVRSNFEVIEAGDGEEALDLFYSEKDIALVILDIMMPKIDG  63
            ++IL+V+D+ ++ + VR FL  + +EV    DG+EA   FY E+   LVILDIM+P ++G
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFY-ENTYQLVILDIMLPGMNG  61

Query  64   WGVCREIRESSKVPIIMLTAKGDESDELNGFDMGADEYISKPFSPKILVARVSALLRRSN  123
              + RE+R  +  PI+M+TA +D+ +++ +FD  AD+Y++KPF  +IL+ RV ALLRRS 
Sbjct  62   HELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  124  KLDPDETLEAGGIVLNKAAHTVTIDGQTVDMSFKEFELLTYFMENAGIALSREKILNSVW  183
             L  +  +  G + L      V  DG  + ++ KEFE+L  +++N G +L++E IL+ +W
Sbjct  122  ALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  184  NYDYFGDARTIDTHVKKLRNKMGEKGTYIKTIWGMGYKFEAA  225
             YD+ GD+ T++TH+K+LR K+ E+   IKTI+G+GY++E +
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLEES  219

42) LM5923_1097 in NC_013768


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

43) LMRG_00522 in NC_017544


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

44) lmo1060 in NC_003210


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

45) LMLG_2327 in NC_017547


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

46) LMKG_01862 in NC_017546


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

47) LMOG_00660 in NC_017545


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

48) BN418_1278 in NC_020557


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

49) BN419_1275 in NC_020558


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

50) LMOSLCC2372_1074 in NC_018588


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

51) LMOSLCC2479_1073 in NC_018589


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

52) LMOSLCC5850_1066 in NC_018592


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

53) M642_02970 in NC_021823


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

54) M639_12340 in NC_021837


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

55) LM5578_1143 in NC_013766


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 150/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EA Y+V +  +G EA   F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MRILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

56) Exig_2177 in NC_010556


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  155 bits (572),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 92/219 (43%), Positives = 151/219 (69%), Gaps = 5/219 (2%)

Query  3    HILIAEDEFDIRELLTELLESSGYHVTSAANGMEALKLHQSATFDLMILDIMMPYLDGFE  62
            +IL+ ED+ +I + +  +L  + Y+V + ++G EA       T++L+ILDIM+P ++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VAQQVRKTSQTPIIFLTALQDEDNQVKGFDLGIDDYIAKPFSLRILLRRIEAVIRRIRTN  122
            + ++ R  ++TPI+ +TAL D++NQ+++FD   DDY++KPF +RILL+R+EA++RR  + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  DEEQLSFR--EITLFPASYNVLISGNAVILTLKEFQILHLLLENPGRVLEREQLIQQLWG  180
              E   FR   +TL+P  + VL  G  + LT KEF+IL LL++N GR L +E ++ ++WG
Sbjct  124  AKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  FDAFGDTRFLDTHIKNLRKKINVPYIQTVKGVGYKLEAT  219
            +D  GD   ++THIKNLR K+    I+T++GVGY+LE +
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

57) SSA_0896 in NC_009009


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  154 bits (568),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 93/215 (44%), Positives = 149/215 (70%), Gaps = 2/215 (0%)

Query  3    KILVVEDDTTINQVICEFLKESQYEVRPVFDGGDALQAFEEEPFDLVILDMMLPTKSGLE  62
            +IL+VEDD  I + +  FL E++YEV +  DG +A   F E+ ++LVILD+MLP  +G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPVMILTALDDEYTQLVSFNHLISDYVTKPFSPLILVKRIENILRRN-TV  121
            +L+E+R  ++ P++++TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LRR+ ++
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  ASEIAVGDLTVSIDDCTVYWQGEKMPLTKKEYEILQTLAKRKGHLVTRDQLMNTIWGYS-  180
            A E+ VG LT+  +D  V  +G  +PLT+KE+EIL  L + KG+ +T++ +++ IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKIPGVPLKTITGMGYQLGG  215
            + D+  ++ HIKN+R K+P   +KTI G+GY+L  
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

58) EUBREC_1462 in NC_012781


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  154 bits (567),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 93/222 (42%), Positives = 154/222 (70%), Gaps = 6/222 (2%)

Query  3    KIKILVVDDESRMRKLVHDFLAREGYEVLEAGDGEEALDIFYQQKDIALLVLDIMMPRIN  62
             I+IL+V+D+ ++ + V+ FLA   YEV    DG+EA   FY++    L++LDIM+P +N
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENT-YQLVILDIMLPGMN  60

Query  63   GFEVCREIRQTSKVPIIMLTAKGDERDELNGFDIGADEYISKPFSPKILVARVNALLRRA  122
            G E+ RE+R  +  PI+M+TA +D+ +++ +FD  AD+Y++KPF  +IL+ RV+ALLRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  123  NKLGKEAVISEAGGIVMDKTAHTVAIDGRNIELSVKEFELLDYFMSNQGIALTRERILDS  182
              L+KE  +   G + +      V  DG ++ L+ KEFE+L  ++ N+G +LT+E IL  
Sbjct  121  GALAKEFRV---GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  183  VWSYDYFGDARTIDTHVKKLRSKMGAKGDYIKTVWGVGYKFE  224
            +W+YD+ GD+ T++TH+K+LR+K+    + IKT++GVGY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

59) CHY_1413 in NC_007503


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  153 bits (566),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 150/220 (69%), Gaps = 7/220 (3%)

Query  4    ILLVDDEEKIREVLRLYLEKEGFLVLEAQDGKEALKRFSEHKIDLIILDLMLPEIDGMEI  63
            ILLV+D++ I + +R +L    + V    DG+EA  +F E+  +L+ILD+MLP ++G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   AKEIRKTSLVPIIMLTARGEEIDKILGLEIGADDYVVKPFSPREVVARVKAVLRRSSGIP  123
             +E+R  +  PI+M+TA +++ ++I +++  ADDYV KPF  R ++ RV A+LRRS++++
Sbjct  65   LREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGALA  124

Query  124  EKEASSVIKQGILEIHPEAREVKVNGEEVVLTPLEFDLLLYLVTNRGKALSREQLLANVW  183
                   ++ G L + PE   V  +G E+ LT  EF++LL LV N+G++L++E +L+ +W
Sbjct  125  KE-----FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  184  GYDYFGEARTVDTHVTRLREKLQEAASYIKTVWGVGYKFE  223
            GYD+ G++ TV+TH+  LR KL E    IKT++GVGY++E
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLE  217

60) RHOM_13295 in NC_015977


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 151/218 (70%), Gaps = 4/218 (1%)

Query  4    ILVVEDDIDIQEILNNYLTDAGYKVIIASDGVAGIAKF-NSEIDLVLLDIMLPKIDGYGV  62
            IL+VEDD +I + +  +L++A Y V   +DG  + +KF ++  +LV+LDIMLP ++G  +
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  63   CEVIRQKSKVPIIMLTALSDEENQLRGFEQQIDDYIPKPFSPKILLCKIAAILRRGLQdn  122
               +R ++  PI+M+TALSD+ENQ+R+F+ + DDY+ KPF  +ILL ++ A+LRR+    
Sbjct  65   LREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS---G  121

Query  123  idkdiiiykdLRMDIEGFHLYCKEQEVILTQKEFDLLRLLLENQGRVFTRQMLLDRLWDF  182
                 +    L +  E+F++ C   E+ LT+KEF++L LL++N+GR +T++++L R+W++
Sbjct  122  ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  183  DTYVEDRIVDSHIKNLRKKLNVDYIETIRGVGYRIDKS  220
            D   ++  V++HIKNLR KL  + I TIRGVGYR++ S
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

61) SGO_1417 in NC_009785


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 89/216 (42%), Positives = 151/216 (70%), Gaps = 2/216 (0%)

Query  3    KILVVEDDTTINQVICEFLKESNYSVTPVYDGAEALRQFEEETFDLVILDMMLPSVSGLD  62
            +IL+VEDD  I + +  FL E+ Y V +  DG EA  +F E+T++LVILD+MLP+++G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPVMILTALDDEYTQLVSFNHLISDYVTKPFSPLILVKRIENILRRTAVY  122
            +L+E+R  ++ P++++TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LRR++  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  S-EIVIGDLRVVLEDCTIFWQGEKLALTKKEYEILEVLAKRKGHLVTRDQLMNTIWGYS-  180
            + E+ +G L ++ ED  ++ +G  L+LT+KE+EIL +L + KG+ +T++ +++ IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKVPGIPLSTITGMGYQLGGD  216
            + D+  ++ HIKN+R K+P   + TI G+GY+L   
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

62) I872_02985 in NC_021175


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 90/215 (42%), Positives = 148/215 (69%), Gaps = 2/215 (0%)

Query  3    KILVVEDDTTINQVICEFLKESNYAVTPVFDGGEALLQFEAESFDLVILDMMLPTMSGLD  62
            +IL+VEDD  I + +  FL E+ Y V +  DG EA  +F  ++++LVILD+MLP M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPVMILTALDDEYTQLVSFNHLISDYVTKPFSPLILVKRIENILRRN-TV  121
            +L+E+R  ++ P++++TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LRR+ ++
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  ASEITVGELTVSIDDCTVYWQEEKMPLTKKEYEILQALAKRKDHLVTRDQLMNTIWGYS-  180
            A E+ VG LT+  +D  V  +   +PLT+KE+EIL  L + K++ +T++ +++ IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKIPGIPLKTITGMGYQLGG  215
            + D+  ++ HIKN+R K+P   +KTI G+GY+L  
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

63) SSUA7_1493 in NC_017622


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

64) SSUBM407_1547 in NC_012926


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

65) SSUD9_1668 in NC_017620


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

66) SSGZ1_1492 in NC_017617


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

67) SSUJS14_1631 in NC_017618


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

68) SSU1472 in NC_012925


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

69) YYK_07040 in NC_018526


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

70) NJAUSS_1536 in NC_020526


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

71) SSUSC84_1500 in NC_012924


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

72) SSU12_1607 in NC_017619


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

73) SSUST1_1538 in NC_017950


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

74) SSUST3_1504 in NC_015433


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 144/216 (67%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E  Y+V++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  + +G + + P    V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            + D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

75) Theco_1889 in NC_019897


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  151 bits (556),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 150/229 (66%), Gaps = 15/229 (6%)

Query  7    RILVVDDEERIRRLLRMYLEKENYQIEEAEDGEQALRMALERDYDLVILDLMLPGMDGIE  66
            RIL+V+D+++I   +R +L    Y+++   DG++A     E  Y+LVILD+MLPGM+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  67   VCSKLRQSKATPVLMLTAKGEEMNRVQGFEAGADDYVVKPFSPREVIYRVKAILRRSSAT  126
            +   +R  + TP+LM+TA +++ N++++F+A ADDYV KPF  R ++ RV A+LRRS+A 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA-  122

Query  127  AYLTRETHASNNIVFPHLMIEHDAHRVTANGQEVQLTPKEYELLHYLALSPDKVFTREDL  186
              L++E + +   ++P      +  RV  +G E+ LT KE+E+L  L  + ++ +T+E +
Sbjct  123  --LAKEFRVGRLTLLP------EDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  187  LKDVWNYEFFGDLRTVDTHVKRLREKLNRVSPEAAAMITTVWGVGYKLE  235
            L  +W Y+F GD  TV+TH+K LR KL      +  +I T++GVGY+LE
Sbjct  175  LSRIWGYDFDGDGSTVHTHIKNLRAKL------PENIIKTIRGVGYRLE  217

76) mprA3 in NC_017542


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 94/219 (43%), Positives = 140/219 (64%), Gaps = 5/219 (2%)

Query  3    RVLVVDDDPHIRELVGHFLRLEGLEVVEAVDGLDAMRLFDETKVDLLVLDIMMPGMDGWE  62
            R+L+V+DD HI + V  FL     EV    DG +A   F E   +L++LDIM+PGM+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRKLREQTDLPLLMLTAKGETSQIVKGFALGTDDYLVKPFDPMVLVARVKALLKRYRIM  122
            L R +R Q D P+LM+TA ++  + +++F   +DDY+ KPF   +L+ RV ALL+R   +
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  ASKSVTIGDLVLRSDTFECQAGEQGITLPRKEFELLFKLASYPGKTFTRDHLIEQIWGYD  182
            A K   +G L L ++ F    +   + L RKEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  124  A-KEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  YEGDERTVDVHIKRLRERFPEATQSFAIRTIRGLGYRLE  221
            ++GD  TV+ HIK LR ++PE      I+TIRG+GYRLE
Sbjct  183  FDGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

77) PPSC2_c2313 in NC_014622


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 94/219 (43%), Positives = 140/219 (64%), Gaps = 5/219 (2%)

Query  3    RVLVVDDDPHIRELVGHFLRLEGLEVVEAVDGLDAMRLFDETKVDLLVLDIMMPGMDGWE  62
            R+L+V+DD HI + V  FL     EV    DG +A   F E   +L++LDIM+PGM+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRKLREQTDLPLLMLTAKGETSQIVKGFALGTDDYLVKPFDPMVLVARVKALLKRYRIM  122
            L R +R Q D P+LM+TA ++  + +++F   +DDY+ KPF   +L+ RV ALL+R   +
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  ASKSVTIGDLVLRSDTFECQAGEQGITLPRKEFELLFKLASYPGKTFTRDHLIEQIWGYD  182
            A K   +G L L ++ F    +   + L RKEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  124  A-KEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  YEGDERTVDVHIKRLRERFPEATQSFAIRTIRGLGYRLE  221
            ++GD  TV+ HIK LR ++PE      I+TIRG+GYRLE
Sbjct  183  FDGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

78) Cbei_4103 in NC_009617


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  151 bits (555),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 93/227 (41%), Positives = 155/227 (69%), Gaps = 16/227 (7%)

Query  1    MDIKILIAEDDNIFRDLVCDIVRKEGYMP-----IEAC-DGEEAINMFFNNNDIDLVILD  54
            M I+IL+ EDD    D +C+ VR  ++++     ++AC DG+EA   F++N   +LVILD
Sbjct  1    MSIRILLVEDD----DHICNTVR--AFLAEARYEVDACTDGNEAHTKFYENT-YQLVILD  53

Query  55   VMMPVYDGWEVLKEIREKSEVPIIMLTALGDEKHEVLGLKKGADDYIGKPFSYEIFVARL  114
            +M+P  +G E+L+E+R +++ PI+M+TAL+D+ +++ ++   ADDY+ KPF   I++ R+
Sbjct  54   IMLPGMNGHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRV  113

Query  115  NNIVKKVKKKFSDEIAVGNLRIYQRTHKVVIDDEEIKLNPKEYNLLLYLVGNINTVLSRE  174
            + ++++    ++ E+ VG L +     +V+ D+ E+ L  KE+++LL LV N    L++E
Sbjct  114  EALLRR-SGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHE  172

Query  175  QILDKVWGYNFDGDIRTIDTHIKTLRAKLSEQGDWIKTIRGSGYMFE  221
             IL ++WGY+FDGD  T++THIK LRAKL+E+   IKTIRG GY +E
Sbjct  173  IILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLE  217

79) HPL003_10930 in NC_016641


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 92/225 (41%), Positives = 152/225 (68%), Gaps = 6/225 (2%)

Query  1    MNKRILLVEDEIRIREVIADYFKQNNWEVYEADNGKDALIWFDSVQPDLVILDIMMPELD  60
            M+ RILLVED+ +I + +  ++ +   EV    +G++A   F     +LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWEVCRQVRSRSGVPIILLTAKSGDDDKILGFELGADDYVTKPFSPKVLIARANALMKRV  120
            G E+ R+ R++++ PI+++TA S+D+++I +F+  ADDYVTKPF  ++L+ R +AL++R 
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  EGHVLPESHVLRFGTAILNTMAHRLEVDQAEVELTPKEYELLRLLIHNKGMVISRDVILS  180
             +     +  +R G   L     R+  D +E+ LT KE+E+L LL++NKG  +++++ILS
Sbjct  121  GAL----AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  181  RVWGIDFEGDTRVVDTHIKKLRSKLGRESRHIRTVFGTGYRFEEE  225
            R+WG DF+GD   V+THIK+LR+KL  +   I+T+ G GYR+EE 
Sbjct  177  RIWGYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

80) Ilyop_2523 in NC_014633


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  150 bits (554),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 101/219 (47%), Positives = 163/219 (75%), Gaps = 4/219 (1%)

Query  3    RILLLEDEDKMRKVVKNFLVKAGYEVIEAC-DGEEALELFYENTFDLAILDVMVPKIDGW  61
            RILL+ED+D + + V+ FL  A YEV +AC DG+EA   FYENT++L ILD+M+P ++G 
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEV-DACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  62   TICRKIRKESKIPIIMLTARSTEDDELFGFDLGADEYITKPFSlkillarvkvllkrkDT  121
             + R +R ++  PI+M+TA S +++++ +FD  AD+Y+TKPF ++ILL RV  LL+R ++
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  122  KTEENSLKVGKLEIDSSSHRVIFFDEILDLTPKEYDMLLMMVENKDIAISRERFLNQIWG  181
             + E  ++VG+L + +   RV+  +  L LT KE+++LL++V+NK+ ++++E +L++IWG
Sbjct  123  LAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  182  FDYYGDLRTVDTHVKQLRKKLKGKHIKTVRGVGYRFEEE  220
            +D+ GD  TV+TH+K+LR KL  + IKT+RGVGYR+EE 
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

81) RTO_22280 in NC_021015


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  150 bits (554),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 155/219 (71%), Gaps = 5/219 (2%)

Query  5    KILVVDDESRMRKLVKDFLTREGYMVLEAGDGMEAMDLFYEDKDIALIILDVMMPKMDGW  64
            +IL+V+D+ ++ + V+ FL+   Y V    DG EA   FYE+    L+ILD+M+P M+G 
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENT-YQLVILDIMLPGMNGH  62

Query  65   QVCREVRETSKVPIIMLTARSEERDELQGFELGVDEYISKPFSPKILVARVNAILRRTLG  124
            ++ RE R  +  PI+M+TA S++ +++++F+   D+Y++KPF  +IL+ RV+A+LRR+ G
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS-G  121

Query  125  AVGNDSLEAGGITIDKSAHIVKIDGTPVELSYKEFELLTYFIENQGIALSREKILNNVWN  184
            A++++ +  G +T+      V  DGT + L+ KEFE+L  +++N+G +L++E IL+ +W 
Sbjct  122  ALAKE-FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  185  YDYFGDARTIDTHVKKLRSKLGDKGEYIKTIWGMGYKFE  223
            YD+ GD+ T++TH+K+LR+KL +  + IKTI+G+GY++E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

82) phoP in NC_014019


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 95/234 (41%), Positives = 154/234 (66%), Gaps = 15/234 (6%)

Query  1    MSKKLLVVDDEQSISTLLQYNLQQAGFTVETAEDGEEGYNKALEGKPDLIVLDLMLPKMD  60
            MS ++L+V+D++ I   ++  L +A + V++  DG+E+  K  E   +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKKLRQQKVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ + +R Q+  TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TQIIAQENEQEEDGERIMIGDLKILPDHYEAYFNQEQLELTPKEFELLLYLAKYKGRVLT  180
            +  +A+E         + +G L +LP+++    +  +L LT KEFE+LL L + KGR LT
Sbjct  120  SGALAKE---------FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  RDQLLSAVWNYDFAGDTRIVDVHISHLREKIEQNTRKPVYIKTIRGLGYKLEEP  234
            ++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  171  HEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

83) phoP in NC_014103


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 95/234 (41%), Positives = 154/234 (66%), Gaps = 15/234 (6%)

Query  1    MSKKLLVVDDEQSISTLLQYNLQQAGFTVETAEDGEEGYNKALEGKPDLIVLDLMLPKMD  60
            MS ++L+V+D++ I   ++  L +A + V++  DG+E+  K  E   +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKKLRQQKVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ + +R Q+  TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TQIIAQENEQEEDGERIMIGDLKILPDHYEAYFNQEQLELTPKEFELLLYLAKYKGRVLT  180
            +  +A+E         + +G L +LP+++    +  +L LT KEFE+LL L + KGR LT
Sbjct  120  SGALAKE---------FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  RDQLLSAVWNYDFAGDTRIVDVHISHLREKIEHNTRKPVYIKTIRGLGYKLEEP  234
            ++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  171  HEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

84) phoP in NC_017138


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 95/234 (41%), Positives = 154/234 (66%), Gaps = 15/234 (6%)

Query  8    MSKKLLVVDDEQSISTLLQYNLQQAGFTVETAEDGEEGYNKALEGKPDLIVLDLMLPKMD  67
            MS ++L+V+D++ I   ++  L +A + V++  DG+E+  K  E   +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  68   GIEVCKKLRQQKVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  127
            G E+ + +R Q+  TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  128  TQIIAQENEQEEDGERIMIGDLKILPDHYEAYFNQEQLELTPKEFELLLYLAKYKGRVLT  187
            +  +A+E         + +G L +LP+++    +  +L LT KEFE+LL L + KGR LT
Sbjct  120  SGALAKE---------FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  188  RDQLLSAVWNYDFAGDTRIVDVHISHLREKIEHNTRKPVYIKTIRGLGYKLEEP  241
            ++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  171  HEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

85) RHOM_11290 in NC_015977


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  149 bits (550),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 147/222 (67%), Gaps = 6/222 (2%)

Query  3    KIRILVVDDESRMRKLVRDFLVREGYEVLEAGDGEEALDLFYREKDIALIILDVMMPKRN  62
             IRIL+V+D+ ++ + VR FL    YEV    DG+EA   FY E+   L+ILD+M+P  N
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFY-ENTYQLVILDIMLPGMN  60

Query  63   GFEVCREIRETSKVPIIMLTAKGEESDELNGFELGVDEYISKPFSPKILVARVGAILRRS  122
            G E+ RE+R  +  PI+M+TA +++ +++ +F+   D+Y++KPF  +IL+ RV A+LRRS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  123  GKTQDEEAAVSMGGIVLDKAAHMVTVDGERIDLSYKEFELLAYFMENAGIALSREKILNS  182
            G    E     +G + L      V  DG  + L+ KEFE+L  +++N G +L++E IL+ 
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  183  VWNYDYFGDARTIDTHVKKLRAKMGDKGKYITTVWGMGYKFE  224
            +W YD+ GD+ T++TH+K+LRAK+ +  + I T++G+GY++E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

86) BBR47_41940 in NC_012491


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  149 bits (547),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 89/218 (41%), Positives = 142/218 (66%), Gaps = 5/218 (2%)

Query  4    IMVVDDDPHIRELVSVFLRNEGFTIVEAVDGQEALDKLESVAAQLVILDIMMPNMDGWEL  63
            I++V+DD HI + V  FL +  + +    DG+EA  K+   + QLVILDIM+P M+G EL
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   CRKLREHYDFPLLMLTAKGETSQKIKGFELGTDDYLVKPFDPQELVVRVKALLKRYRIAA  123
             R +R + D P+LM+TA ++  ++I++F+  +DDY+ KPF  + L+ RV ALL+R   A 
Sbjct  65   LREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR-SGAL  123

Query  124  SHQVQAGKLILDRKTFAVASGTKTWTIPLKEFEMLFKLASYPGQTISREQLIEQIWGYDF  183
            + + + G+L L    F V  +     +  KEFE+L+ L    G+T+++E ++ +IWGYDF
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  184  EGNERTVDVHINRLRERFPEAMYGFLIRTVRGLGYRLE  221
            +G+  TV+ HI+ LR ++PE +    I+T+RG+GYRLE
Sbjct  184  DGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

87) SFUL_3399 in NC_021177


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  146 bits (538),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 150/225 (67%), Gaps = 12/225 (5%)

Query  23   RVLVVDDDPTVAEVVVGYLHRAGYAVERAGDGPAALERFAAARPDLVVLDLMLPAMDGFE  82
            R+L+V+DD  + + V ++L  A Y V+   DG  A  +F     +LV+LD+MLP+M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  83   VCRRMRAHGPVPVIMLTARGDEEDRILGLETGADDYVTKPFSPRELVLRVESVLRRAGAG  142
            + R  RA+   P++M+TA +D+E++I ++++ ADDYVTKPF  R L+ RVE++LRR+GA 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA-  122

Query  143  TPAAEEARPLSGAGLRLDPVARSASRDGAGLALTLREFDLLAFLLRHPGRAFGREELMRE  202
                  A+ +  + L L P       DG+ L+LT +EF++L +L+++ GR++ +E ++  
Sbjct  123  -----LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  203  VWGWDF-GDLSTVTVHIRRLRGKVEQDPARPRLIRTVWGVGYRLD  246
            +WG DF GD STV  HI+ LR+K+ ++     +I+T++GVGYRL+
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

88) TherJR_2641 in NC_014152


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  146 bits (538),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 89/219 (41%), Positives = 150/219 (69%), Gaps = 7/219 (3%)

Query  5    KILIADDEARMRKLVADFLKKEGYAIIEAADGRQALDLFYGNNDIDLIILDVMMPGYDGW  64
            +IL+ +D+ ++ + V  FL    Y +   +DG +A   FY +N  +L+ILD+M+PG +G 
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFY-ENTYQLVILDIMLPGMNGH  62

Query  65   TVCREIRKSSQVPIIMLTARGEESDELFGFDLGADEYIAKPFSLKILAARIQALLRRVQN  124
             + RE+R  ++ PI+M+TA +++ +++ +FD  AD+Y++KPF ++IL  R++ALLRR  +
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR--S  120

Query  125  NRTVRSF--DGLEIDEQGRYVYVDGEPVDLSPKEFELLLYLTENAGRALSREQILNAVWD  182
                + F  + L +  ++  V  DG  + L+ KEFE+LL L +N GR+L++E IL+ +W+
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  YDYFGDVRTVDTHIKKLRLKLGEKSYLIQTVRGLGYRFE  221
            YD+ GD  TV+THIK+LR KL E+  +I+T+RG+GYR+E
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLE  217

89) BpOF4_06195 in NC_013791


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  145 bits (532),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 92/227 (41%), Positives = 142/227 (63%), Gaps = 11/227 (4%)

Query  3    EIRILIVEDEAPMRELLQLYLRKEGYVVDEAITGIEALEKVEKTLYSVVLLDVMMPEMDG  62
             IRIL+VED+  + + ++ +L    Y VD    G EA  K     Y +V+LD+M+P M+G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNG  61

Query  63   FEVCREIRKVSQVPVIMLTARTQTLDKVKGLKIGADDYLTKPFEQEELLARVEAVLRRYG  122
             E+ RE+R  ++ P++M+TA ++  ++++++   ADDY+TKPF    LL RVEA+LRR G
Sbjct  62   HELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  123  VSEPESRGNTLFFKGLVMKRNAYQVYYNEEELSLTPKEFAILELFLLNKNRVFSRDDILE  182
                E R        L +  + ++V  +  EL+LT KEF IL L++ NK R ++++ IL 
Sbjct  122  ALAKEFRVGR-----LTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  LVWGYDFIGDYRGVDTHVKHLRDKLTEAGISGRSVIKTVWGVGYKLG  229
             +WGYDF GD   V+TH+K+LR KL E      ++IKT++GVGY+L 
Sbjct  177  RIWGYDFDGDGSTVHTHIKNLRAKLPE------NIIKTIRGVGYRLE  217

90) phoP in NC_009848


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  144 bits (528),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 152/238 (64%), Gaps = 19/238 (7%)

Query  1    MNKKILVVDDEESIVTLLSYNLERAGYDVVTARDGEEALEKAASEQPDLIVLDLMLPKMD  60
            M+ +IL+V+D++ I   +   L  A Y+V +  DG+EA  K   +  +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKQLRIQKMMFPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVGARVKAILRR  120
            G E+ +++R Q+   PILM+TA  D+ +++ +++  ADDY+TKPF  R +  RV A+LRR
Sbjct  61   GHELLREFRAQNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  AQQSQPAPTQEEKEEIIADQIKIGELRILPEHYEVYFQEERLELTPKEFELLLYLAKHKG  180
            +               +A ++++G L +LPE++ V  +   L LT KEFE+LL L ++KG
Sbjct  120  S-------------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKG  166

Query  181  RVLTRDLLLSAVWNYDFAGDTRIVDVHISHLRDKIEKNTKKPTYIKTIRGLGYKLEEP  238
            R LT++++LS +W YDF GD   V+ HI +LR K+  N      IKTIRG+GY+LEE+
Sbjct  167  RTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

91) GTNG_0792 in NC_009328


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  144 bits (528),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 146/220 (67%), Gaps = 5/220 (2%)

Query  5    RILVVDDDAHIRELVSHFLSLEGLTIHEAANGKEALDVLETTKVDLVIMDIMMPEMDGWE  64
            RIL+V+DD HI + V  FL+     ++  ++G+EA   +     +LVI+DIM+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   LCRELRDYDDVPILMLTAKGETREKVKGFSLGADDYLVKPFDPLELVARVKALLKRYRIA  124
            L RE+R  +D PILM+TA ++  +++++F   ADDY+ KPF    L+ RV ALL+R    
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  125  TSQIVQIGHLSLNRKTYECRLGDVEVPLPPKEFELLFQLASYPGKTFTRDELIEQIWGYD  184
            + ++ ++G+L+L    +    ++ E+PL  KEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  124  AKEF-RVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  185  YEGDERTVDVHIKRLRERFAQPNVPFFIRTIRGLGYRLEA  224
            ++GD  TV+ HIK LR ++++     +I+TIRG+GYRLE 
Sbjct  183  FDGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEE  218

92) phoP in NC_006270


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  143 bits (526),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 95/236 (41%), Positives = 153/236 (65%), Gaps = 17/236 (7%)

Query  1    MSKKILVVDDEESIVTLLKYNLERSGYHVVTAMDGEAGLLKAIEEKPDLIVLDLMLPKMD  60
            MS +IL+V+D++ I   ++  L  + Y+V +  DG+ +  K  E+  +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKELRQKKLMYPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVTARVKAILRR  120
            G E+ +E+R ++   PILM+TA  D+ +++ +++  ADDY+TKPF  R +  RV A+LRR
Sbjct  61   GHELLREFRAQNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TQTLSVQPEETEEPDAGELIIGELKILPEHYEVYFQNERLELTPKEFELLLYLGRHKGRV  180
            + +L           A E+ +G L +LPE++ V  +   L LT KEFE+LL L ++KGR 
Sbjct  120  SGAL-----------AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRT  168

Query  181  LTRDLLLNAVWNYDFAGDTRIVDVHISHLRDKIEKNTKKPEYIKTIRGLGYKMEEP  236
            LT++++L+ +W YDF GD   V+ HI +LR K+  N      IKTIRG+GY++EE+
Sbjct  169  LTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

93) phoP2 in NC_006322


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  143 bits (526),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 95/236 (41%), Positives = 153/236 (65%), Gaps = 17/236 (7%)

Query  1    MSKKILVVDDEESIVTLLKYNLERSGYHVVTAMDGEAGLLKAIEEKPDLIVLDLMLPKMD  60
            MS +IL+V+D++ I   ++  L  + Y+V +  DG+ +  K  E+  +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKELRQKKLMYPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVTARVKAILRR  120
            G E+ +E+R ++   PILM+TA  D+ +++ +++  ADDY+TKPF  R +  RV A+LRR
Sbjct  61   GHELLREFRAQNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TQTLSVQPEETEEPDAGELIIGELKILPEHYEVYFQNERLELTPKEFELLLYLGRHKGRV  180
            + +L           A E+ +G L +LPE++ V  +   L LT KEFE+LL L ++KGR 
Sbjct  120  SGAL-----------AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRT  168

Query  181  LTRDLLLNAVWNYDFAGDTRIVDVHISHLRDKIEKNTKKPEYIKTIRGLGYKMEEP  236
            LT++++L+ +W YDF GD   V+ HI +LR K+  N      IKTIRG+GY++EE+
Sbjct  169  LTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

94) phoP in NC_021362


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  143 bits (526),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 95/236 (41%), Positives = 153/236 (65%), Gaps = 17/236 (7%)

Query  1    MSKKILVVDDEESIVTLLKYNLERSGYHVVTAMDGEAGLLKAIEEKPDLIVLDLMLPKMD  60
            MS +IL+V+D++ I   ++  L  + Y+V +  DG+ +  K  E+  +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKELRQKKLMYPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVTARVKAILRR  120
            G E+ +E+R ++   PILM+TA  D+ +++ +++  ADDY+TKPF  R +  RV A+LRR
Sbjct  61   GHELLREFRAQNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TQTLSVHPEETEEPDAGELIIGELKILPEHYEVYFQNERLELTPKEFELLLYLGRHKGRV  180
            + +L           A E+ +G L +LPE++ V  +   L LT KEFE+LL L ++KGR 
Sbjct  120  SGAL-----------AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRT  168

Query  181  LTRDLLLNAVWNYDFAGDTRIVDVHISHLRDKIEKNTKKPEYIKTIRGLGYKMEEP  236
            LT++++L+ +W YDF GD   V+ HI +LR K+  N      IKTIRG+GY++EE+
Sbjct  169  LTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

95) Eab7_0619 in NC_018665


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 154/226 (69%), Gaps = 12/226 (5%)

Query  5    SFKILVVDDEAQMRDLLVSNLQKENYQTTTATNGQEALDQMQRDTFHLVLLDVMMPEMDG  64
            S++IL+V+D+ ++ + + + L    Y+  + T+G+EA  +   +T++LV+LD+M+P M+G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNG  61

Query  65   LTACMRIREF---SNVPIIMLTARSDELDRIHGLKIGADDYITKPFSPRELLARIEATLR  121
                  +REF   ++ PI+M+TA SD+ ++I+++   ADDY+TKPF  R LL R+EA LR
Sbjct  62   HEL---LREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLR  118

Query  122  RSHRFTVDQSATLTIGKLELDTESRSVHVSGKPISLTRKEFDLLHLFVQNNDKVFSREQL  181
            RS  ++ +    + +G+L L  E   V   G  ++LTRKEF++L L+VQN+++ +++E +
Sbjct  119  RSGALAKE----FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  182  LDQIWGADYIGNLRTVDTHIKTLRLKLGEAGGSIQTVWGIGYKFEE  227
            L +IWG D+ G+  TV+THIK LR KL E    I+T++G+GY++EE
Sbjct  175  LSRIWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

96) GC56T3_2648 in NC_014206


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 145/220 (66%), Gaps = 5/220 (2%)

Query  5    RILIVDDDAHIRELVSHFLNLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWE  64
            RIL+V+DD HI + V  FL    + ++  ++G+EA   +     +LVI+DIM+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   LCRELRDYDDVPILMLTAKGETRQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIA  124
            L RE+R  +D PILM+TA ++  +++++F+  ADDY+ KPF    L+ RV ALL+R    
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  125  TSQIVQIGRLSLNRKTYECRLGDQEIFLPPKEFELLFKLASYPGKTFTRDELIEQIWGYD  184
            + ++ ++GRL+L    +    ++ E+ L  KEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  124  AKEF-RVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  185  YDGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEA  224
            +DGD  TV+ HIK LR ++++      I+TIRG+GYRLE 
Sbjct  183  FDGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEE  218

97) GK0908 in NC_006510


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 145/220 (66%), Gaps = 5/220 (2%)

Query  3    RILIVDDDAHIRELVSHFLNLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWE  62
            RIL+V+DD HI + V  FL    + ++  ++G+EA   +     +LVI+DIM+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRELRDYDDVPILMLTAKGETRQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIA  122
            L RE+R  +D PILM+TA ++  +++++F+  ADDY+ KPF    L+ RV ALL+R    
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  TSQIVQIGRLSLNRKTYECRLGDQEIFLPPKEFELLFKLASYPGKTFTRDELIEQIWGYD  182
            + ++ ++GRL+L    +    ++ E+ L  KEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  124  AKEF-RVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  YDGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEA  222
            +DGD  TV+ HIK LR ++++      I+TIRG+GYRLE 
Sbjct  183  FDGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEE  218

98) GTCCBUS3UF5_10780 in NC_016593


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 145/220 (66%), Gaps = 5/220 (2%)

Query  3    RILIVDDDAHIRELVSHFLNLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWE  62
            RIL+V+DD HI + V  FL    + ++  ++G+EA   +     +LVI+DIM+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRELRDYDDVPILMLTAKGETRQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIA  122
            L RE+R  +D PILM+TA ++  +++++F+  ADDY+ KPF    L+ RV ALL+R    
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  TSQIVQIGRLSLNRKTYECRLGDQEIFLPPKEFELLFKLASYPGKTFTRDELIEQIWGYD  182
            + ++ ++GRL+L    +    ++ E+ L  KEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  124  AKEF-RVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  YDGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEA  222
            +DGD  TV+ HIK LR ++++      I+TIRG+GYRLE 
Sbjct  183  FDGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEE  218

99) Amet_3209 in NC_009633


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 154/221 (70%), Gaps = 4/221 (1%)

Query  2    VGSRILLVEDEKNLRKLVATYLKKEMVSVIEAADGKEALVLWEEEQYDLIIVDIMLPEYD  61
            ++ RILLVED+ ++ + V ++L      V   +DG+EA     E+ Y+L+I+DIMLP  +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  62   GWTICKRIREKSNVPILILTARSEEHDKLFGFDLGVDDYMTKPFSVKELVARVKALLKRS  121
            G  + + +R +++ PIL++TA S++++++ +FD   DDY+TKPF ++ L+ RV ALL+RS
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  122  NRQLSTETLIVQGLKVDKKGHQVFLQGERLMLTPKEYDLLLIFLHNQNQALSREVILDGV  181
               L+ E + V  L +   + +V+ +G  L LT KE+++LL++++N+ ++L++E+IL  +
Sbjct  121  G-ALAKE-FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  182  WGYDYYGDLRTVDTHVKRLRHKLKEMGEQIKTVRGLGYRFE  222
            WGYD+ GD  TV+TH+K LR KL E  + IKT+RG+GYR+E
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

100) CLS_07200 in NC_021047


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  141 bits (520),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 98/221 (45%), Positives = 152/221 (69%), Gaps = 4/221 (1%)

Query  1    MAKTILIIEDEIAIQNIVRAFLEDAGYTVYSAGDGLEGIETFRRCdpdlvlldlmlpKID  60
            M+  IL++ED+  I N VRAFL +A Y V +  DG E+   F     +LV+LD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFAVCEILRKESRTPIIMLTARDDDASQMKGFDVLADDYIIKPFSMPLVLRRIEAVLRRT  120
            G  +   +R ++ TPI+M+TA  DD +Q+++FD  ADDY+ KPF M ++L+R+EA+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  EQGTEEEPSVIRYKEITLDAENYEVLVGTDEVSLTSREFEILKLLLENPGKVFSRESLLD  180
               + E    +R   +TL +E++ VL +  E++LT +EFEIL LL++N G+ +++E +L 
Sbjct  121  GALAKE----FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  181  SVWGYEYYGDQKIVNTHIKNIRKKLGVDYIETIRGVGYKIE  221
             +WGY++ GD   V+THIKN+R KL  + I TIRGVGY++E
Sbjct  177  RIWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

101) Desdi_1113 in NC_019903


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  141 bits (519),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 150/223 (68%), Gaps = 10/223 (4%)

Query  5    QLLIVDDEEHICNLVSLYLSDE-FHITKVYDGHTALSVFVEKKFDLIVLDIMLPGLNGWE  63
            ++L+V+D++HICN V  +L++  +++    DG+ A + F E+ ++L++LDIMLPG+NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  64   LCRKIRMLSDTPVIMLTAKDDPHDKILGFDLGADDYVTKPFNPGELLARAKAVLRRFNSA  123
            L R +R  +DTP++M+TA  D +++I +FD  ADDYVTKPF+   LL R  A+LRR ++A
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR-SGA  122

Query  124  SSEELQIIKYPGFILNKESFKVEILGQLLELTAKEFSLLWFFASNPGIVLQRENIMLKVW  183
             + E+++ +   + L  E F+V   G  L LT KEF +L ++  N G  L +E I+ ++W
Sbjct  123  LAKEFRVGR---LTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  184  GFDYLGDTRTIDNTIKRLRRKLESVPEAPVYIQTVWGLGYKFE  226
            G+D+ GD  T++  IK LR KL   PE    I+T++G+GY++E
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKL---PEN--IIKTIRGVGYRLE  217

102) GWCH70_2675 in NC_012793


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 152/232 (66%), Gaps = 15/232 (6%)

Query  1    MCKKVLVVDDEQSIVTLLTYNLEQAGFTVLTANDGEEAIEKVAFEQPAF--IILDLMLPK  58
            M  ++L+V+D++ I   +   L +A + V +  DG+EA  K  F + ++  +ILD+MLP 
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTK--FYENTYQLVILDIMLPG  58

Query  59   LDGVEVCKQLRQQKVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAIL  118
            ++G E+ +++R Q+  TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+L
Sbjct  59   MNGHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALL  117

Query  119  RRTQLSNGEMETKEIVIGDLKILPDSYEAYFRGERLELTPKEFELLVYLAKHKGRVLTRD  178
            RR+    G + +KE+ +G L +LP+ +     G  L LT KEFE+L+ L ++KGR LT++
Sbjct  118  RRS----GAL-AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHE  172

Query  179  QLLSSVWNYDFAGDTRIVDVHISHLREKIEQDTKKPIYIKTIRGLGYKLEGP  230
             +LS +W YDF GD   V+ HI +LR K+ ++      IKTIRG+GY+LE +
Sbjct  173  IILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

103) Dtox_2915 in NC_013216


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  140 bits (514),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 88/217 (41%), Positives = 146/217 (68%), Gaps = 3/217 (1%)

Query  6    KILIADDEPRMLKLVSDFLKKDGHSVFVADNGRQALDIFNEQQLDLVILDVMMPEYDGWA  65
            +IL+ +D+ ++ + V  FL      V    +G +A   F E+  +LVILD+M+P  +G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  66   VCREIRKTSHVPIIMLTARAEESDELFGFELGADEYVTKPFSPKILVARVQALLRRIAEH  125
            + RE+R  ++ PI+M+TA +++ +++ +F+  AD+YVTKPF  +IL+ RV+ALLRR +  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  126  KNQMISIEGLEIDESGRCVTVDGVPLDLSMKEFELLNYLVNNQGRALNRDQILNAVWDYN  185
             ++ + +  L +   +  V  DG  L L+ KEFE+L  LV+N+GR+L ++ IL+ +W+Y+
Sbjct  124  AKE-FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  186  YFGDARTVDTHIKNLRHKLGAKGLFIKTIRGLGYKFE  222
            + GD+ TV+THIKNLR KL  +  +IKTIRG+GY++E
Sbjct  183  FDGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLE  217

104) pcoR in NC_020504


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 90/219 (42%), Positives = 138/219 (64%), Gaps = 2/219 (0%)

Query  1    MRLLIVEDEKRLALSLAKGLTAEGYAVDVVHDGREGLHRASESPYDLVILDIMLPGMNGY  60
            +R+L+VED+ ++  ++   L+   Y VD   DG E+  +  E+ Y+LVILDIMLPGMNG 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   RVCGALRAAGHDVPILMLTAKDGEYDEAEGLDTGADDYLTKPFSYVVLVARIKALLRRRG  120
             +   +RA  +D PILM+TA  ++ ++  ++D+ ADDY+TKPF   +L+ R+ ALLRR G
Sbjct  63   ELLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  121  PGASPVLVHGDLKVDTAARRVHLGESEVALTAKEFAVLEQLVTRAGEVVSKASILEHVWD  180
            + A    V G L +     RV  + +E++LT KEF +L  LV   G  ++   IL ++W+
Sbjct  122  ALAKEFRV-GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  FAYDGDPNIVEVYISTLRRKLRPGLIRTVRGAGYRLESG  219
            + +DGD + V+  I  LR KL   +I+T+RG GYRLE +
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

105) Calhy_2332 in NC_014652


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 89/217 (42%), Positives = 149/217 (69%), Gaps = 5/217 (2%)

Query  1    MKILLVEDEEKLRKVIKLYLEKEGFEVEEASDGNEAIEKFQPSMYSVVILDVMLPQKDGW  60
            ++ILLVED++ + + ++ +L    +EV+  +DGNEA  KF  + Y +VILD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SVLREIRKKDDTPVIMLTARGEDDDKIFGFELGADDYVVKPVSPKEIVARVKAILKRTKK  120
             +LRE+R ++DTP++M+TA ++D+++I +F+  ADDYV KP   + ++ RV A+L+R+  
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  121  PSSN---DILFIDKAAREVYVKGQKINLTQKeyelllylyeRQNIALSRELILNSVWGYE  177
             + +   + L +      V   G  + LT+KE+E+LL L + +  +L++E+IL+ +WGY+
Sbjct  123  LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  178  YYGDLRTVDTHIKNLREKLGDLRDYIKTVRGYGYKFE  214
            + GD  TV+THIKNLR KL +  + IKT+RG GY++E
Sbjct  183  FDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

106) GTNG_2656 in NC_009328


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  138 bits (508),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 151/232 (66%), Gaps = 14/232 (6%)

Query  1    MGKKILVVDDEQPIVTLLSYNLEKAGFQVVAAYDGEEALEKVAFEQP-ALIILDLMLPKL  59
            M+ +IL+V+D++ I   +   L  A ++V A  DG+EA  K  +E+   L+ILD+MLP +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKF-YENTYQLVILDIMLPGM  59

Query  60   DGVEVCKRLRQQQIMTPILMLTARDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILR  119
            +G E+ + +R Q+  TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LR
Sbjct  60   NGHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLR  118

Query  120  RTDLAQPAAEPSERLVIGDLEIFPERYEAAVGDKPLELTPKEFELLLHLARHKGRVLTRD  179
            R+      +  +  + +G L ++PE +    ++  L LT KEFE+LL L ++KGR LT++
Sbjct  119  RS------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHE  172

Query  180  QLLSAVWNYDFAGDTRIVDVHISHLREKIEEDTKKPVYIKTVRGLGYKLEEP  231
             +LS +W YDF GD   V+ HI +LR K+ E+      IKT+RG+GY+LEE+
Sbjct  173  IILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

107) Ththe16_1739 in NC_017272


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  138 bits (508),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 147/223 (66%), Gaps = 9/223 (4%)

Query  1    MRVLLVDDDPALLEVLGAYLRGAGFEVLQAEDGERA-LELYPRA-DLIILDLMLPKLDGF  58
            +R+LLV+DD  + + + A+L  A +EV    DG+ A   +Y  + +L+ILD+MLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  59   RVLAEVRRERPELPILMLTARGEEEERVKGLELGADDYVVKPFSPKEVVARVKALLRRAG  118
             +L E R  + + PILM+TA +++E+++++++  ADDYV KPF  + ++ RV ALLRR+G
Sbjct  63   ELLREFR-AQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  119  -LKEELNYGPLRLLPKERQAYLEGKPLPLSQLEFDLLLTLAQHPGMVFTRERLLEKVWGP  177
             L  E+  G L LLP + +   +G  LPL++ EF++LL L Q+ G  +T+E +L ++WG 
Sbjct  122  ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  178  DFPGIDRVVDVHIAALRKKLMDDPENPRFIETVRGVGYRFREG  220
            DF G +  V+ HI  LR KL ++     +I T+RGVGYR+ E+
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

108) Calow_0190 in NC_014657


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 92/218 (43%), Positives = 148/218 (68%), Gaps = 7/218 (3%)

Query  1    MKILLIEDEEKLRKIIKLYLEKEGFEVKEASDGNEAIEKFQPSMYSVVILDVMLPQKDGW  60
            ++ILL+ED++ + + ++ +L    +EV   +DGNEA  KF  + Y +VILD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SVLREIRKKDDTPVIMLTARGEDDDKIFGFELGADDYVVKPVSPKEIVARVKAILKRS--  118
             +LRE+R ++DTP++M+TA ++D+++I +F+  ADDYV KP   + ++ RV A+L+RS  
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  119  --KKSSSDEILFIDKAAREVYVKGQKLNLTQKeyelllylyeRQNIALSREQILNSVWGY  176
              K    + + ++    R V   G  L LT+KE+E+LL L + +  +L++E IL+ +WGY
Sbjct  123  LAKEFRVGRLTLLPEDFR-VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  177  EYYGDLRTVDTHIKNLREKLGELRDYIKTVRGYGYKFE  214
            ++ GD  TV+THIKNLR KL E  + IKT+RG GY++E
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

109) Aaci_0044 in NC_013205


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 142/222 (64%), Gaps = 13/222 (5%)

Query  4    ILVADDEPHIRELVRSTLEREGHrvveaadgreaadavarePVQLAVIDVMMPEVDGFEL  63
            IL+ +D+ HI + VR+ L      V   +DG EA      +  QL ++D+M+P ++G EL
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   TRWLREERDVPILLLTALGETSHKVRGLRLGADDYLVKPFAPEELVARVEALLRRYRIRA  123
             R +R + D PIL++TAL++  +++R++   ADDY+ KPF    L+ RVEALLRR     
Sbjct  65   LREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR-----  119

Query  124  DGALD----LAVLRLLSDTYEVEANGERMALPPKEFQLLFTLAASAGRTLSRDKLIEEVW  179
             GAL     ++ L LL++ + V  +G  ++L  KEF++L+ L  + GRTL+++ ++  +W
Sbjct  120  SGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  180  GYDYAGDERTVDVHIKRLRVKFPEDVYPFRIRTVRGLGYRLE  221
            GYD+ GD  TV+ HIK LR K+PE++    I+T+RG+GYRLE
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

110) czcR2 in NC_009659


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 144/222 (65%), Gaps = 5/222 (2%)

Query  1    MKILLVEDEVKSGEYLRKGLREAGFVVDWARDGAEGLQLALQESYELVILDVMLPLLDGW  60
            ++ILLVED+    + +R  L EA + VD   DG E+     +++Y+LVILD+MLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   QLLRELRKVRDTPVLFLTARDEVEDRVKGLELGADDYLVKPFSFMELIARVRTLLRRGPV  120
            +LLRE+R   DTP+L +TA  + E+++++++  ADDY+ KPF    L+ RV +LLRR+  
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  121  RESSLIEIADMQIDVMKRRVTRNGERLDLTAKEFSLLHLLAQRRGEVLSRSLIASQVWDM  180
                +  ++ + +     RV  +G  L LT KEF +L LL Q +G  L++ +I S++W+ 
Sbjct  123  LAKEF-RVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  181  NFDSDTNVVDVAIRRLRAKLDDPHPRKLIQTVRGIGYVLEEG  222
            +FD+D + V+  I+ LRAKL    P ++I+T+RG+GY LEE+
Sbjct  182  DFDGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEES  219

111) Calla_2103 in NC_015949


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 89/218 (41%), Positives = 148/218 (68%), Gaps = 7/218 (3%)

Query  1    MKILLIEDEEKLRKIIKLYLEKEGFEVEEASDGNEAIEKFQPSMYSVVILDVMLPQKDGW  60
            ++ILL+ED++ + + ++ +L    +EV+  +DGNEA  KF  + Y +VILD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SVLREIRKKDDTPVIMLTARGEDDDKIFGFELGADDYVVKPVSPKEIVARVKAILKRT--  118
             +LRE+R ++DTP++M+TA ++D+++I +F+  ADDYV KP   + ++ RV A+L+R+  
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  119  --KKPNSNDILFIDKAAREVYVKGQKINLTQKeyelllylyeRQNIALSREQILNSVWGY  176
              K      + ++    R V   G  + LT+KE+E+LL L + +  +L++E IL+ +WGY
Sbjct  123  LAKEFRVGRLTLLPEDFR-VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  177  EYYGDLRTVDTHIKNLREKLGDLRDYIKTVRGYGYKFE  214
            ++ GD  TV+THIKNLR KL +  + IKT+RG GY++E
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

112) irr in NC_012891


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDIPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKH-QIGDLLVDEIEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKVVTRDQLMDDIWGYS-  180
             K+ ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

113) Calkr_0246 in NC_014721


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 89/218 (41%), Positives = 148/218 (68%), Gaps = 7/218 (3%)

Query  1    MKILLIEDEEKLRKIIKLYLEKEGFEVEEVSDGNEAIEKFQPSMYSVVILDVMLPQKDGW  60
            ++ILL+ED++ + + ++ +L    +EV+  +DGNEA  KF  + Y +VILD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SVLREIRKKDDTPVIMLTARGEDDDKIFGFELGADDYVVKPVSPKEIVARVKAILKRT--  118
             +LRE+R ++DTP++M+TA ++D+++I +F+  ADDYV KP   + ++ RV A+L+R+  
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  119  --KKPNSNDILFIDKAAREVYVKGQKINLTQKeyelllylyeRQNIALSREQILNSVWGY  176
              K      + ++    R V   G  + LT+KE+E+LL L + +  +L++E IL+ +WGY
Sbjct  123  LAKEFRVGRLTLLPEDFR-VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  177  EYYGDLRTVDTHIKNLREKLGDLRDYIKTVRGYGYKFE  214
            ++ GD  TV+THIKNLR KL +  + IKT+RG GY++E
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

114) irr in NC_019042


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDIPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKH-QIGDLLVDEIEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K+ ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

115) SDE12394_05215 in NC_017567


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDIPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKH-QIGDLLVDEIEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K+ ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

116) irr in NC_018712


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDIPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKH-QIGDLLVDEIEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K+ ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

117) irr in NC_018936


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

118) SPYALAB49_001707 in NC_017596


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

119) L897_08600 in NC_021807


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

120) ir in NC_020540


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

121) SPy_2027 in NC_002737


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

122) SpyM51688 in NC_009332


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

123) irr in NC_008022


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

124) M6_Spy1725 in NC_006086


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

125) irr in NC_008024


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

126) irr in NC_017040


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

127) irr in NC_017053


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

128) irr in NC_008023


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

129) SpyM3_1733 in NC_004070


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

130) irr in NC_007297


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

131) irr in NC_007296


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

132) spyM18_2084 in NC_003485


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

133) irr in NC_008021


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

134) Spy49_1677c in NC_011375


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

135) SPs1730 in NC_004606


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 136/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   +  V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            + D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  DGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

136) COB47_0246 in NC_014392


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 90/217 (42%), Positives = 148/217 (69%), Gaps = 5/217 (2%)

Query  1    MKILLIEDEEKLRKIMKLYLEKEGFEVEEASDGNEAIEKFQPSMYSVVILDVMLPQKDGW  60
            ++ILL+ED++ + + ++ +L    +EV+  +DGNEA  KF  + Y +VILD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SVLREIRKKDDTPVIMLTARGEDDDKIFGFELGADDYVVKPVSPKEIVARVKAILKRTKK  120
             +LRE+R ++DTP++M+TA ++D+++I +F+  ADDYV KP   + ++ RV A+L+R+  
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  121  PSSN---DILFIDKAAREVYVKGQKLNLTQKeyelllylyeRQNIALSREQILNSVWGYE  177
             + +   + L +      V   G  L LT+KE+E+LL L + +  +L++E IL+ +WGY+
Sbjct  123  LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  178  YYGDLRTVDTHIKNLREKLGELRDCIKTVRGYGYKFE  214
            + GD  TV+THIKNLR KL E  + IKT+RG GY++E
Sbjct  183  FDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

137) phoP in NC_007168


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 151/232 (66%), Gaps = 15/232 (6%)

Query  1    MSQKVLVVDDEQSIVTLLKYNLETAGYIVEVAYDGEEALEKVNEIQPELVVLDVMLPKKD  60
            MS ++L+V+D++ I   ++  L  A Y V+   DG+EA  K  E   +LV+LD+MLP  +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKTIRSDKNLVPILMLTAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ + +R++++  PILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  SKFASEIEKADVDDEDILIENIRIRPEFFEVYKDDELLELTPKEFELLLYLIERQGRVIT  180
            S   + + K      ++ +  + + PE F V  D+  L LT KEFE+LL L++ +GR +T
Sbjct  120  S---GALAK------EFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  REHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPKLIKTVRGLGYKLE  232
            +E +L+ +W Y+F GD+  V+ HI +LR KL EN     +IKT+RG+GY+LE
Sbjct  171  HEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

138) BcerKBAB4_4419 in NC_010184


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  136 bits (501),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRIMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVSESPDEESIKIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    ++++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

139) Cyan7425_2927 in NC_011884


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/226 (43%), Positives = 145/226 (65%), Gaps = 11/226 (4%)

Query  1    MRILVVEDDLQLAEMLAEVLSDHNYIVDLAEDGEKAWD--YVNTLEYDLVILDVTLPRLD  58
            +RIL+VEDD ++ + +   L++  Y VD   DG+ A    Y NT  Y+LVILD+ LP ++
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENT--YQLVILDIMLPGMN  60

Query  59   GIGFCQRWRGKGEATPVLMLTARDTLADKVTGLDAGADDYMVKPFELPELLARVRAMLRR  118
            G  + +  R++ + TP+LM+TA     +++ ++DA ADDY+ KPF +  LL RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  119  SGASVALNLSWGRLHLNPSTYEVTFDNRPLSLTPKEYALLELLVSNGRRVLSRTGIIERI  178
            SGA +A ++  GRL L P  + V  D   L+LT KE+ +L LLV N  R L++  I+ RI
Sbjct  120  SGA-LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  179  WSLEDPPSEETVKSHIKGLRAKLREAGAPDNFIETVHGLGYRLQQA  224
            W+ +      TV +HIK LRAKL     P+N+I T++G+GYRL+++
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKL-----PENIIKTIRGVGYRLEES  219

140) Bcer98_3274 in NC_009674


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 98/234 (42%), Positives = 149/234 (64%), Gaps = 15/234 (6%)

Query  1    MSNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEVAFQKATTERPDLIILDLMLPKMD  60
            MS RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQEEQIPEVPDENSIMISELKILPEFYEAYFRGEKLELTPKEFELLVYLARNKGRVLT  180
            +          +  + + ++ L +LPE +     G  L LT KEFE+L+ L +NKGR LT
Sbjct  120  S---------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  RDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEHNTKKPAYIKTIRGLGYKLEEP  234
            ++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  171  HEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

141) phoP in NC_012659


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

142) phoP in NC_007530


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

143) phoP in NC_003997


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

144) phoP in NC_012581


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

145) H9401_4612 in NC_017729


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

146) BAS4484 in NC_005945


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

147) phoP in NC_012472


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

148) phoP in NC_011658


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

149) phoP in NC_011773


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

150) phoP in NC_003909


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTESSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

151) BC4589 in NC_004722


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

152) phoP in NC_011725


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

153) phoP2 in NC_014335


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

154) phoP in NC_006274


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

155) bcf_22985 in NC_016779


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

156) BCK_12275 in NC_018491


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTESSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

157) phoP in NC_011772


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

158) BCN_4489 in NC_016771


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

159) phoP in NC_011969


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTESSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

160) phoP in NC_008600


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

161) phoP in NC_014171


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

162) phoP2 in NC_018877


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

163) BTG_25920 in NC_018500


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

164) BTF1_21485 in NC_018508


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

165) phoP in NC_017208


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

166) YBT020_22565 in NC_017200


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTESSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

167) H175_ch4682 in NC_020376


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

168) phoP in NC_005957


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

169) HD73_4884 in NC_020238


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

170) Clocl_1711 in NC_016627


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  134 bits (490),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 77/178 (44%), Positives = 127/178 (72%), Gaps = 7/178 (3%)

Query  45   DLVLLDIMLPGEDGIEILKKLKASPKLRNIPVIMLTAKSAEYDKVLGLDSGADDYITKPF  104
            +LV+LDIMLPG +G E+L+ ++A     + P++M+TA S + +++ ++D+ ADDY+TKPF
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQN---DTPILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  105  GIMEFLSRVKAVLRRSGNVSNPSEISVGRITMYIDKHVVIADGKEVALTFKEFELLKYLM  164
             +  +L RV A+LRRSG +++  E+ VGR+T+  +   V+ DG E++LT KEFE+L  L+
Sbjct  105  KMRILLKRVEALLRRSGALAK--EFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLV  162

Query  165  ENAGIVLTRDKLLEEVWGYEYEGETRTLDVHIRTLRQKLGEAGAVIETVRGVGYKIGG  222
            +N G  LT++ +L  +WGY+++G+  T++ HI+ LR KL E   +I T+RGVGY++  
Sbjct  163  QNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

171) Apre_1374 in NC_013171


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  134 bits (491),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 89/219 (41%), Positives = 142/219 (65%), Gaps = 7/219 (3%)

Query  2    IYVVEDDKSIRNLVEYALREKGYEVAGYEDGSQIVSDVKDSPGELLILDIMLPEKDGITI  61
            I +VEDD  I N V   L E  YEV +  DG++  +   ++  +L+ILDIMLP  +G  +
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  62   LKEIREFSDIPIIMLTARTDEFDKVMGLDLGADDYITKPFSILELISRVKAVLRRSKKKD  121
            L+E+R  +D PI+M+TA +D+ +++ ++D  ADDY+TKPF +  L+ RV A+LRRS    
Sbjct  65   LREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGALA  124

Query  122  TDHISYKEVRLNMKKRSVKV--DGVKIDLTYKEFEMLLLFMSNIGNVITRDDFLLKVWGY  179
             +   ++  RL +     +V  DG  + LT KEFE+LLL++ N G  +T++ +L ++WGY
Sbjct  125  KE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  180  DYEGETRTVDVHIASLRAKLKNAGKYIETVRNLGYKFGE  218
            D++G+  TV+ HI +LRAKL  + + I T+R +GY++ E
Sbjct  182  DFDGDGSTVHTHIKNLRAKL--PENIIKTIRGVGYRLEE  218

172) Cthe_1600 in NC_009012


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  134 bits (490),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 78/178 (44%), Positives = 127/178 (72%), Gaps = 7/178 (3%)

Query  45   DLVLLDIMLPGEDGIEILKKLKASPKLRNIPVIMLTAKSAEYDKVLGLDSGADDYITKPF  104
            +LV+LDIMLPG +G E+L+ ++A     + P++M+TA S + +++ ++D+ ADDY+TKPF
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQN---DTPILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  105  GIMEFLSRVKAVLRRSGNVSNSSEISVGQLTMYIDKHVVIADGKEVALTFKEFELLKYLM  164
             +  +L RV A+LRRSG +++  E+ VG+LT+  +   V+ DG E++LT KEFE+L  L+
Sbjct  105  KMRILLKRVEALLRRSGALAK--EFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLV  162

Query  165  ENAGIVLTRDKLLEEVWGYEYEGETRTLDVHIRTLRQKLGEAGAIIETVRGVGYKIGG  222
            +N G  LT++ +L  +WGY+++G+  T++ HI+ LR KL E   II T+RGVGY++  
Sbjct  163  QNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

173) STH750 in NC_006177


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  133 bits (487),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 93/229 (41%), Positives = 153/229 (67%), Gaps = 10/229 (4%)

Query  4    VPERILVVDDEPSILELVAYNLRRAGFEVLTADNGEDGLRIAREEEIDLVILDVMLPGID  63
            ++ RIL+V+D+  I + V   L  A +EV +  +G+++     E+  +LVILD+MLPG++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  64   GFEVLRALRRHSELPVLMLTARGEEIDRVVGFEIGADDYVTKPFSPRELTGRVKAILRRA  123
            G E+LR +R +++ P+LM+TA +++ +++ +F+  ADDYVTKPF  R L  RV A+LRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  124  RRSAEPQDQDTLVLGPLTINFASYEVLRDGRRVDLTPTEFQILGVLARSPGRVFTRDELV  183
              +A +++   + +G LT+    + VL DG  + LT  EF+IL +L ++ GR +T++ ++
Sbjct  121  --GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  184  DRVMGPDFYGDVRTVDVHIRHLRAKLEENPSEPRLIETVRGVGYRFAGP  232
             R+ G DF GD  TV+ HI++LRAKL EN     +I T+RGVGYR+  +
Sbjct  176  SRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

174) Cbei_1731 in NC_009617


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  133 bits (489),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 146/221 (67%), Gaps = 6/221 (2%)

Query  5    RILVVDDEPLIRKLVTDFLKKQGYVTIEADDGKKAMNLFSNEENIDLIILDVMLPEYDGF  64
            RIL+V+D+  I + V  FL    Y      DG+ A   F  E+  +L+ILD+MLP  +G 
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKF-YENTYQLVILDIMLPGMNGH  62

Query  65   TVCREIRKKSKVPIIMLTARGEEFDEVFGLDIGADEYISKPFSPNILIARVNAVLRRANS  124
             + RE+R ++  PI+M+TA +++ +++ ++D  AD+Y++KPF   IL+ RV+A+LRR+ +
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  125  EDKGKELKDFNGLTIDHSAHQVVIDGEVVDLSPKEYELLIYLSENYGKALSREQILDKVW  184
               +KE++    LT+     +V+ DG  + L+ KE+E+L+ L +N G++L++E IL ++W
Sbjct  123  --LAKEFR-VGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  185  GYDYYGDLRTVDTHINRLRIKLDRKSDYIQTVRGYGYRFEE  225
            GYD+ GD  TV+THI+ LR KL    + I+T+RG GYR+EE
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKL--PENIIKTIRGVGYRLEE  218

175) MC28_3867 in NC_018693


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  133 bits (487),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 149/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +A +EV +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R Q   TPILM+TA  D+ +++ +++  ADDY+TKPF  R ++ RV A+LRR
Sbjct  61   GHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSILIADLKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    + ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEKNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+  N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

176) Aaci_2264 in NC_013205


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 140/219 (64%), Gaps = 7/219 (3%)

Query  1    MRILLVEDEVRLASALKQLLKEHQYAVDVAHDGETGCDLALTDSYDLAILDIMLPKMSGL  60
            +RILLVED+ ++ ++++ +L E +Y VD   DG+ +      ++Y+L ILDIMLP M+G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   DILRAMRKAGLQTPVLLLTAKDTVEDRVTGLDAGADDYLVKPFDNKELLARVRALSRRTG  120
            ++LR  R    +TP+L++TA    E+++ ++DA ADDY+ KPF  + LL RV AL RR+G
Sbjct  63   ELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  121  QIAGGDAIEAGPFRLDLNTRTVTRNGEPLALTAKEFQLLELFMRNPNKVLSKEVILDRVW  180
             +A    +  G + L  +   V  +G  L+LT KEF++L L+++N  + L+ E+IL R+W
Sbjct  122  ALA--KEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GPDADVIGNAVENYVHFLRKKIDEPDLPSYITTVRGVGY  219
            G D D  G++V+  +  LR K+ E    + I T+RGVGY
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLPE----NIIKTIRGVGY  214

177) GYMC10_2166 in NC_013406


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 148/229 (65%), Gaps = 15/229 (6%)

Query  7    RILVVDDEERIRRLLKMYLekegyeieeaedgeTALRKASSEDYGLVILDVMLPGMDGVE  66
            RIL+V+D+++I   ++ +L    YE++   DG+ A  K   + Y LVILD+MLPGM+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  67   VCTRLRQVKSTPILMLTAKGEEINRVQGFEVGADDYVVKPFSPREVIYRVKAILRRSSAT  126
            +   +R  + TPILM+TA +++ N++++F+  ADDYV KPF  R ++ RV A+LRRS+A 
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA-  122

Query  127  AYLSKEPNPSNSIVFPHLIIEHDAHRVTAGGHEISLTPKEYELLHYLASSPDKVFSREEL  186
              L+KE   +   ++P      +  RV  +G E++LT KE+E+L  L  + ++ +++E +
Sbjct  123  --LAKEFRVGRLTLLP------EDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  187  LKDVWNYEFFGDLRTVDTHVKRLREKLNKVSAESAAMITTVWGVGYKLE  235
            L  +W Y+F GD  TV+TH+K LR KL      +  +I T++GVGY+LE
Sbjct  175  LSRIWGYDFDGDGSTVHTHIKNLRAKL------PENIIKTIRGVGYRLE  217

178) Eab7_2024 in NC_018665


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 89/216 (42%), Positives = 148/216 (69%), Gaps = 1/216 (0%)

Query  3    HILIAEDDFDIRELLTELLESSGYQVTSAVNGMEALKLHQTATFDLIILDIMMPFFDGFE  62
            +IL+ EDD +I + +  +L  + Y+V +  +G EA       T++L+ILDIM+P  +G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VAQQIRKTSQTPIIFLTALQDEENQVKGFDLGIDDYIAKPFSlrvllrrieaiirriQTN  122
            + +++R  ++TPI+ +TAL D+ENQ+++FD   DDY++KPF +R+LL+R+EA++RR    
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR-SGA  122

Query  123  VEEELSFREITLFPASYNVLISGNAIILTLKEFQILHLLLEHPGRVLEREQLIQQLWGFE  182
            +  E+    +TL+P  + VL  G  + LT KEF+IL LL+++ GR L +E ++ ++WG++
Sbjct  123  LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  AFGDTRFLDTHIKNLRKKINVPYIQTVKGVGYKLEA  218
              GD   ++THIKNLR K+    I+T++GVGY+LE 
Sbjct  183  FDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

179) LEUM_1810 in NC_008531


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  132 bits (484),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 147/223 (66%), Gaps = 8/223 (3%)

Query  4    AIKILLIEDDVNLADNVVGFLQDFA-DINAVTDGLDGEFEAQEAPYDLIISDLMLPGETG  62
            +I+ILL+EDD ++ + V +FL +   +++A TDG +++    E  Y+L+I D+MLPG  G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNG  61

Query  63   LELIKNLRANDVETPVLILTAKTSLDDKIEGFNVGADDYLTKPFHREELLVRVKALLRRS  122
             EL++++RA++ +TP+L++TA +  +++I +F+  ADDY+TKPF    LL RV ALLRRS
Sbjct  62   HELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  123  GVYSEDNTLAVGDVMINLENRGVQVHGQPVKLVGKEFDILTYLAQNKNIIVTRDQIFDRV  182
            G  + +  + VG + +  E+  V  +G  + L  KEF+IL  L QNK   +T++ I+ R+
Sbjct  121  GALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  183  WGIDSDTTINVVNIYLNNLRRKLEAVGQNNLIKTLRNIGFILE  225
            WG D D   + V+  ++NLR KL     +N+IKT+R +G+ LE
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLE  217

180) MI1_07875 in NC_016805


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  132 bits (484),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 147/223 (66%), Gaps = 8/223 (3%)

Query  4    AIKILLIEDDVNLADNVVGFLQDFA-DINAVTDGLDGEFEAQEAPYDLIISDLMLPGETG  62
            +I+ILL+EDD ++ + V +FL +   +++A TDG +++    E  Y+L+I D+MLPG  G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNG  61

Query  63   LELIKNLRANDVETPVLILTAKTSLDDKIEGFNVGADDYLTKPFHREELLVRVKALLRRS  122
             EL++++RA++ +TP+L++TA +  +++I +F+  ADDY+TKPF    LL RV ALLRRS
Sbjct  62   HELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  123  GVYSEDNTLAVGDVMINLENRGVQVHGQPVKLVGKEFDILTYLAQNKNIIVTRDQIFDRV  182
            G  + +  + VG + +  E+  V  +G  + L  KEF+IL  L QNK   +T++ I+ R+
Sbjct  121  GALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  183  WGIDSDTTINVVNIYLNNLRRKLEAVGQNNLIKTLRNIGFILE  225
            WG D D   + V+  ++NLR KL     +N+IKT+R +G+ LE
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLE  217

181) ANT_22660 in NC_014960


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  131 bits (481),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 144/219 (66%), Gaps = 7/219 (3%)

Query  6    ILLVDDEPSIVSLCRMYLEREGFRVQSAGDGVTALEMLKKSPPDLMILDVMLPELDGFEV  65
            ILLV+D+  I +  R +L    + V++  DG  A   +  +  +L+ILD+MLP ++G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  66   CKQLRAQNDPLPILMLTARDEDYDKILGLELGADDYMTKPFNPRELVARVKAILRRTRHQ  125
             +++RAQND  PILM+TA  +D ++I +++  ADDY+TKPF+ R L+ RV A+LRR+   
Sbjct  65   LREFRAQNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  126  THEDQNVIRIGNIVVDPARYEVRNGDYLIPLRAQEFEVLCVLARNAGRVLSREQLLEKAW  185
            + E    +R+G + + P  + V  ++  +PL  +EFE+L +L +N GR L++E +L + W
Sbjct  124  AKE----FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  186  GFDFYGQTRTVDVHIAQLRRKLADSGVTIETVTGVGYKL  224
            G+DF G+  TV+ HI +LR KL+++   I T+ GVGY+L
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRL  216

182) Toce_1455 in NC_014377


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  130 bits (476),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 93/222 (42%), Positives = 147/222 (67%), Gaps = 6/222 (2%)

Query  3    EIRILVVDDEEKIVDLVKLYLEKEGFKVDEAHDGQQALDMIAKGEYNLIILDLMLPVIDG  62
             IRIL+V+D++ I + V+ +L    + VD   DG++A   +    Y+L+ILD+MLP ++G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNG  61

Query  63   WTVCKEVRKKSDIPIIMLTARGEEFDKVLGFELGADDYVVKPFSPrelvarvkallrrlG  122
              + +E R ++D PI+M+TA +++ +++ +F+  ADDYV KPF  R L+ RV ALLRR G
Sbjct  62   HELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  123  PKGPEQTLEFPGLVIEPESRTVRADGKEVALTPKEFDLLYFLAKNKEKVFTREKLLEEVW  182
            + + E  +    L + PE   V  DG E++LT KEF++L +L +NK + +T+E +L  +W
Sbjct  122  ALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYDFFGSLRTVDTHIKQLREKLGRSKAASYITTVWGVGYKFE  224
            GYDF G   TV+THIK+LR KL    + + I T++GVGY++E
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLE  217

183) BN6_74520 in NC_019673


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  129 bits (474),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 139/220 (64%), Gaps = 5/220 (2%)

Query  23   MTRRVLVVEDDLTIASSVAARLRAEGFDVDLAHDGPSAVAK--AGNADLVVLDVMLPGFD  80
            M+ R+L+VEDD  I ++V A L    ++VD   DG  A +K      +LV+LD+MLPG +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  81   GLEVCRRIQAERPVPVLMLTARGDETDLLVGLAVGADDYLTKPFSIRELAARVHALLRRV  140
            G E+ R ++A+   P+LM+TA +D+ + + ++   ADDY+TKPF +R L  RV+ALLR  
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLR--  118

Query  141  ERSAAPPTRISVADVEIDLAERRVLRAGEEAHLTPTEFELLVHLAERPRAVQSRERLLSA  200
             RS+A +  + V+ + +   + RVL  G E  LT  EFE+L+ L +      ++E +LS 
Sbjct  119  -RSGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  201  VWGWPDGTGTRTVDSHIKALRRKLGTDLIRTVHGVGYALE  240
            +WG   + +  TV++HIK LR KL  ++I+T++GVGY LE
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

184) Cabther_A0067 in NC_016024


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 150/225 (67%), Gaps = 6/225 (2%)

Query  1    MKRNIVIIEDDADIAQSIRYNLEQEGSFHVTITTTGEAGLRTVLEHppslilldlnlplM  60
            M   I+++EDD +I +++R  L  E+ ++V   T G+ +     E+   L++LD+ LP M
Sbjct  1    MSIRILLVEDDDHICNTVRAFLA-EARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGM  59

Query  61   NGFEICRRLRREEATAQVPIIMLTARTDETDKIHGLGLGADDYVTKPFSVRELMARINAV  120
            NG E+ R +R ++ T   PI+M+TA +D+ ++I++++  ADDYVTKPF +R L+ R++A+
Sbjct  60   NGHELLREFRAQNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEAL  116

Query  121  LRRTEGNPSSVYDDGTLFIDYNHFIVRCQGQEINMTRKEFALLKLLAQSKGRVLTREYLL  180
            LRR+ G  +  +  G L +  ++F V C+G E+ +TRKEF +L LL Q+KGR LT+E +L
Sbjct  117  LRRS-GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  181  DRVWGIDYDGETRTLDVHIRRVRQKLGIDGYIETAVGIGYRFVEA  225
             R+WG D+DG+  T++ HI+ +R KL  +  I T  G+GYR+ E+
Sbjct  176  SRIWGYDFDGDGSTVHTHIKNLRAKLP-ENIIKTIRGVGYRLEES  219

185) Thal_0320 in NC_013894


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  129 bits (472),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 134/216 (63%), Gaps = 3/216 (1%)

Query  3    RILLVEDDLYLGQMMVEGLRHEGFTVEWVQDGFTALRRVVEENYDLVILDIMLPKFDGMK  62
            RILLVEDD  + + +   L +  + V+   DG  A  +  E+ Y+LVILDIMLP  +G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VCRKIRETKDIPVIMVTARSQIEDKVEGLSAGADDYITKPFSFKELSARIQAVLRRYRKK  122
            + R +R  +D P++M+TA S+ E+++ ++ A ADDY+TKPF  + L  R++A+LRR    
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  EGVIMVGDLRIDPSAVEVTYRGQKIHLTRREFELLKLLAENANRVVSREEIYAKVWGYSH  182
               + VG L + P    V   G  + LTR+EFE+L LL +N  R +++E I +++WGY  
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  183  EEGSNIVDVYIKNLRNKLGDKPPRLIQTVRGYGYIL  218
            + +++ V+  IKNLR KL   P  +I+T+RG GY L
Sbjct  184  DGDGSTVHTHIKNLRAKL---PENIIKTIRGVGYRL  216

186) SEQ_1549 in NC_012471


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 94/233 (41%), Positives = 146/233 (63%), Gaps = 15/233 (6%)

Query  1    MTKRVLLVDDEEPILRLLDYHLAKEGFVTEMVTDGRTALALAEREPYDFIVLDIMLPQLD  60
            M+ R+LLV+D++ I   +   LA   +  +  TDG  A +    + Y++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGSKTPIMMVSAKSDEFDKVLALELGADDYVTKPFSPRELLARVKAILRR  120
            G E+ + +RA+ + TPI+M++A SD+ +++ A++  ADDYVTKPF  R LL RV A+LRR
Sbjct  61   GHELLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TEAEISGDGEERREPFYTMSQLRLYPERHEVYKDKELLPLTPKEYELLLYLMKHPNMTLT  180
            + A             + +++L L PE   V  D   LPLT KE+E+LL L+++   TLT
Sbjct  120  SGALAKE---------FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  RERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGYGYKFKE  233
            +E +L RIWGYDF+ +   V+ HI +LR K+ +N      I+TIRG GY++ E
Sbjct  171  HEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

187) phoB1 in NC_017582


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 94/233 (41%), Positives = 146/233 (63%), Gaps = 15/233 (6%)

Query  8    MTKRVLLVDDEEPILRLLDYHLAKEGFVTEMVTDGRTALALAEREPYDFIVLDIMLPQLD  67
            M+ R+LLV+D++ I   +   LA   +  +  TDG  A +    + Y++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  68   GIEVCKRLRAKGSKTPIMMVSAKSDEFDKVLALELGADDYVTKPFSPRELLARVKAILRR  127
            G E+ + +RA+ + TPI+M++A SD+ +++ A++  ADDYVTKPF  R LL RV A+LRR
Sbjct  61   GHELLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  128  TEAEISGDGEERREPFYTMSQLRLYPERHEVYKDKELLPLTPKEYELLLYLMKHPNMTLT  187
            + A             + +++L L PE   V  D   LPLT KE+E+LL L+++   TLT
Sbjct  120  SGALAKE---------FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  188  RERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGYGYKFKE  240
            +E +L RIWGYDF+ +   V+ HI +LR K+ +N      I+TIRG GY++ E
Sbjct  171  HEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

188) SZO_06010 in NC_012470


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 94/233 (41%), Positives = 146/233 (63%), Gaps = 15/233 (6%)

Query  1    MTKRVLLVDDEEPILRLLDYHLAKEGFVTEMVTDGRTALALAEREPYDFIVLDIMLPQLD  60
            M+ R+LLV+D++ I   +   LA   +  +  TDG  A +    + Y++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGSKTPIMMVSAKSDEFDKVLALELGADDYVTKPFSPRELLARVKAILRR  120
            G E+ + +RA+ + TPI+M++A SD+ +++ A++  ADDYVTKPF  R LL RV A+LRR
Sbjct  61   GHELLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TEAEISGDGEERREPFYTMSQLRLYPERHEVYKDKELLPLTPKEYELLLYLMKHPNMTLT  180
            + A             + +++L L PE   V  D   LPLT KE+E+LL L+++   TLT
Sbjct  120  SGALAKE---------FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  RERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGYGYKFKE  233
            +E +L RIWGYDF+ +   V+ HI +LR K+ +N      I+TIRG GY++ E
Sbjct  171  HEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

189) EAT1b_0324 in NC_012673


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  128 bits (467),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 90/218 (42%), Positives = 141/218 (65%), Gaps = 3/218 (1%)

Query  1    MRILIVEDDPSILRLVKETFEDAGHEVLTATDGNTGEELFTTQPIDAAIVDIMLPGLDGR  60
            +RIL+VEDD  I   V+  + +A  EV + TDGN ++  F  +  +  I+DIMLPG++G+
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   ELCRRLKATLDIPVILLTALDEWEDKRQGFELGADDYVTKPFIPEELLFRLQAVSRRYQR  120
            EL R ++A  D P++++TAL + E++ ++F+  ADDYVTKPF    LL R++A+ RR   
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR-SG  121

Query  121  SAASQIQAGPLRLDLREYEVTLEGQLFYLPKKEFELLFQLASFPGRVYRREELIELVWGF  180
            + A +++ G L L   ++ V  +G  + L +KEFE+L+ L    GR   +E ++  +WG+
Sbjct  122  ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  181  DFEGDERTVDVHIKRLRNRFDHPALTIRTVRGVGYALE  218
            DF+GD  TV+ HIK LR ++  P   I+T+RGVGY LE
Sbjct  182  DFDGDGSTVHTHIKNLRAKL--PENIIKTIRGVGYRLE  217

190) Dacsa_0514 in NC_019780


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 146/232 (63%), Gaps = 16/232 (6%)

Query  1    MMPRILVIDDDPAISELVTINLEMAGYTVEPANDGIKGQALAVQLQPDLIMLDLMLPRVD  60
            M  RIL+++DD  I + V   L  A Y V++  DG  +++   +   +L++LD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GLTVCQRLRRDERT-ADIPVLMLTALGQTQNKVEGFNAGADDYLTKPFEVEEMLARVRAL  119
            G    + L R+ R+  D P+LM+TAL++ +N++ +F+A ADDY+TKPF +  +L RV AL
Sbjct  61   G----HELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEAL  116

Query  120  LRRTDRIPKAARHSEILNYGPLTLVPERFEAIWFGKTVKLTHLEFELLHCLLQRHGQTVS  179
            LRR++ ++K  R       G LTL+PE F  +  G  + LT+ EFE+L  L+Q  G+T++
Sbjct  117  LRRSGALAKEFRV------GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  180  PSDILKEVWGYDPDDDIETIRVHIRHLRTKLEPEPRHPMYIKTVYGAGYCLE  231
               IL  +WGYD D+D  T++ HI++LR+KL  +      IKT+ G GY LE
Sbjct  171  HEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLE  217

191) phoP in NC_019042


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 94/234 (41%), Positives = 150/234 (65%), Gaps = 16/234 (6%)

Query  1    MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLD  60
            M+ +ILLV+D++HI   +   L+   +  +  TDG  A T    + +++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGIKTPIMMVSAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRR  120
            G E+ + +RA+   TPI+M++A SD+ +++ A++  ADDY+TKPF  R LL RV A+LRR
Sbjct  61   GHELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TSKEQQEddtddfrddYRVFGALTVYPDRHEVYKADHLLSLTPKEFELLLYLMKHPNMTL  180
            ++   +E         +RV G LT+ P+   V   +  L+LT KEFE+LL L+++   TL
Sbjct  120  SGALAKE---------FRV-GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKE  234
            T+E +L RIWGYDF+ +   V+ HI +LR K+ +N     +I+TIRG GY++ E
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

192) SDE12394_02985 in NC_017567


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 94/234 (41%), Positives = 150/234 (65%), Gaps = 16/234 (6%)

Query  1    MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLD  60
            M+ +ILLV+D++HI   +   L+   +  +  TDG  A T    + +++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGIKTPIMMVSAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRR  120
            G E+ + +RA+   TPI+M++A SD+ +++ A++  ADDY+TKPF  R LL RV A+LRR
Sbjct  61   GHELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TSKEQQEddtddfrddYRVFGALTVYPDRHEVYKADHLLSLTPKEFELLLYLMKHPNMTL  180
            ++   +E         +RV G LT+ P+   V   +  L+LT KEFE+LL L+++   TL
Sbjct  120  SGALAKE---------FRV-GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKE  234
            T+E +L RIWGYDF+ +   V+ HI +LR K+ +N     +I+TIRG GY++ E
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

193) phoP in NC_012891


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 94/234 (41%), Positives = 150/234 (65%), Gaps = 16/234 (6%)

Query  1    MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLD  60
            M+ +ILLV+D++HI   +   L+   +  +  TDG  A T    + +++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGIKTPIMMVSAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRR  120
            G E+ + +RA+   TPI+M++A SD+ +++ A++  ADDY+TKPF  R LL RV A+LRR
Sbjct  61   GHELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TSKEQQEddtddfrddYRVFGALTVYPDRHEVYKADHLLSLTPKEFELLLYLMKHPNMTL  180
            ++   +E         +RV G LT+ P+   V   +  L+LT KEFE+LL L+++   TL
Sbjct  120  SGALAKE---------FRV-GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKE  234
            T+E +L RIWGYDF+ +   V+ HI +LR K+ +N     +I+TIRG GY++ E
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

194) phoP in NC_018712


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 94/234 (41%), Positives = 150/234 (65%), Gaps = 16/234 (6%)

Query  1    MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLD  60
            M+ +ILLV+D++HI   +   L+   +  +  TDG  A T    + +++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGIKTPIMMVSAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRR  120
            G E+ + +RA+   TPI+M++A SD+ +++ A++  ADDY+TKPF  R LL RV A+LRR
Sbjct  61   GHELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  TSKEQQEddtddfrddYRVFGALTVYPDRHEVYKADHLLSLTPKEFELLLYLMKHPNMTL  180
            ++   +E         +RV G LT+ P+   V   +  L+LT KEFE+LL L+++   TL
Sbjct  120  SGALAKE---------FRV-GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKE  234
            T+E +L RIWGYDF+ +   V+ HI +LR K+ +N     +I+TIRG GY++ E
Sbjct  170  THEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

195) Slip_0097 in NC_014220


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 87/208 (42%), Positives = 135/208 (65%), Gaps = 10/208 (4%)

Query  19   RLYLEKEGYAVEAAWDGEEALSKFRSNNPDLVILDIMLPKKDGWTVCREIRAMSNAPIIM  78
            R +L    Y V+A  DG+EA +KF  N  +LVILDIMLP  +G  + RE+RA +++PI+M
Sbjct  19   RAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHELLREFRAQNDTPILM  78

Query  79   LTAKGEESDRVLGLDLGADDYVCKPFSPIELVARVKAVLRRTSLANQDGNRVLFYPG-LT  137
            +TA +++ +++ ++D  ADDYV KPF    L+ RV A+LRR++   ++     F  G LT
Sbjct  79   MTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGALAKE-----FRVGRLT  133

Query  138  VNYDSHLVEVDGRRVSLTPKEFELLWFLASHPGKVYSREQLLSYVWDYDYLGDPRTVDTH  197
            +  +   V  DG  ++LT KEFE+L +L  + G+  ++E +LS +W+YD+ GD  TV+TH
Sbjct  134  LLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFDGDGSTVHTH  193

Query  198  IKRLREKLESGVKQRYIRTVWGRGYKFE  225
            IK LR KL   +    I+T++G GY++E
Sbjct  194  IKNLRAKLPENI----IKTIRGVGYRLE  217

196) phoB in NC_016077


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 142/220 (65%), Gaps = 8/220 (3%)

Query  1    MEDDENIRELVAYALESQQFETQTFADGESFYKVLEKKIPDLVLLDIMLPGESGIEILKK  60
            +EDD++I + V   L   ++E ++ +DG+     +  +  +LV+LDIMLPG +G E+L+ 
Sbjct  8    VEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHELLRE  67

Query  61   IRHKERTADLPVIMLTARTSEYDVVKGLTIGADDYVTKPFGILELISRIRAVLRRSHRVE  120
            +R ++   D P++M+TA + + + ++++   ADDYVTKPF +  L+ R+ A+LRRS  + 
Sbjct  68   FRAQN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGALA  124

Query  121  KPSEMLVCGPVTLDPLKHAVSAYGEEVMLTAKEFELLHYLMMNVGIVLQREQIMESVWGF  180
            K   +   G +TL P    V   G E+ LT KEFE+L  L+ N G  L +E I+  +WG+
Sbjct  125  KEFRV---GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  181  TYAGESRTIDMHIKSLRQKLGEGGQIIKTIRGVGYRLDEP  220
             + G++ T++ HIK+LR KL E  +IIKTIRGVGYRL+E+
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEES  219

197) Ferpe_0988 in NC_017095


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 78/192 (41%), Positives = 132/192 (69%), Gaps = 2/192 (1%)

Query  29   YKVASFDNGIDALENFKQLAPDLVILDIMLPDMDGYEIAQNLRKLSPDVLILMLTALGMK  88
            Y V +  +G +A  +F + + +LVILDIMLP+M+G E+ +++R    D  ILM+TAL+  
Sbjct  27   YEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHELLREFRA-QNDTPILMMTALSDD  85

Query  89   KDKLTGFESGADDYLTKPFDNEEllarikallrrkHIDVSRPYRIGRLEIYEDRRTVYYD  148
             +++ +F++ ADDY+TKPF +  +L +    L R+   +++ +R+GRL +  +   V  D
Sbjct  86   ENQIRAFDAEADDYVTKPF-KMRILLKRVEALLRRSGALAKEFRVGRLTLLPEDFRVLCD  144

Query  149  GKEIDLTKTEFELLMYLVKNRNRAVSKEEILNAVWGIDYYGSDNTVEVYINYLRKKLSPD  208
            G E+ LT+ EFE+L+ LV+N+ R+++ E IL+ +WG D+ G ++TV+  I+ LR KL+ +
Sbjct  145  GTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN  204

Query  209  LIKTVRGIGYRL  220
            +IKT+RG+GYRL
Sbjct  205  IIKTIRGVGYRL  216

198) phoP1 in NC_014974


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 143/223 (65%), Gaps = 9/223 (4%)

Query  1    MRVLLVDDDPALLEVLGAYLRGAGFEVLEAKDGEKALELF--PRADLIILDLMLPKLDGF  58
            +R+LLV+DD  + + + A+L  A +EV    DG+ A   F     +L+ILD+MLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNG-  61

Query  59   KvleevrrerpelpILMLTARGEEEERVKGLELGADDYVVKPFSPKEVVARVKALLRRAG  118
              L    R + + PILM+TA +++E+++++++  ADDYV KPF  + ++ RV ALLRR+G
Sbjct  62   HELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  119  -LKEELCYGPLRLLPKERQAYLEGKPLPLSQLEFDLLLTLAQHPGMVFTRERLLEKVWGP  177
             L  E+  G L LLP + +   +G  LPL++ EF++LL L Q+ G  +T+E +L ++WG 
Sbjct  122  ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  178  DFPGIDRVVDVHIAALRKKLMDDPENPRFIETVRGVGYRFREG  220
            DF G +  V+ HI  LR KL ++     +I T+RGVGYR+ E+
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

199) AXY_06550 in NC_018704


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  124 bits (453),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 90/218 (42%), Positives = 144/218 (67%), Gaps = 4/218 (1%)

Query  4    ILVVDDDDHIRQLIALYLKNHHFEVVEARNGYEAIEKLEQNPIDLAIVDIMMPKMDGIEL  63
            IL+V+DDDHI + +  +L + ++EV    +G EA  K+ +N  +L I+DIM+P M+G EL
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   TKEIRQYYSIPILMVTAKGASEDKVSGFEAGTDDYLVKPFDPIELVLRVKALLKRYNINV  123
             +E+R     PILM+TA +  E+++ +F+A +DDY+ KPF    L+ RV ALL+R +  +
Sbjct  65   LREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR-SGAL  123

Query  124  ERNNRIGTIEIDLDRLIVSDGETTVelkrkecelllelSFEPGRIFTRAQLVEKIWGFDY  183
             ++ R+G + +  + + V  + T + L RKE E+LL L  + GR +T+  ++ +IWG+D+
Sbjct  124  AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  184  EGDERTVDVHIKRLREKLAPFKELKITTVRGLGYRLED  221
            +GD  TV+ HIK LR KL+   E  I T+RG+GYRLE+
Sbjct  184  DGDGSTVHTHIKNLRAKLP---ENIIKTIRGVGYRLEE  218

200) cusR in NC_014355


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 145/223 (66%), Gaps = 8/223 (3%)

Query  1    MRILLVEDDADLAQFIRKGLKEERYAVDVASNGEQGFELGIANPYDLIILDIMLPVLDGL  60
            +RILLVEDD ++ + +R  L E RY VD  ++G+++      N Y+L+ILDIMLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SLCRRLRSTGVTAPVLLLTARDTVQDKVSGLDLGADDYLTKPFAFaellararallrrGG  120
             L R +R+    +P+L++TA    ++++ ++D  ADDY+TKPF    LL R  ALLRR+G
Sbjct  63   ELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  121  PQLQARLTAADLELDPATHRV-CRGGNEIALTNKEYALLEFLLRNKNRVLTRTAIIEHVW  179
            + L   +  + L L P   RV C +G E++LT KE+ +L +L++NK R LT+  I+ ++W
Sbjct  122  A-LAKEFRVGRLTLLPEDFRVLC-DGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  180  DISYDPMTNIVDAHIRSLRAKMDRDFSPALITTVRGAGYMLED  222
            +  +D   + V++HI++LRAK+    +  +I T+RG GY LE+
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEE  218

201) Mesil_0142 in NC_014212


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 96/222 (44%), Positives = 144/222 (65%), Gaps = 9/222 (4%)

Query  3    RVLLVDDDPAIREVLSAYLRQEGYEVVEAADGLEALGKIPQAS--LVVLDLMLPRLSGWE  60
            R+LLV+DD  I + + A+L +  YEV   +DG EA  K+ + +  LV+LD+MLP ++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   VARELRRDYPELPVLMLTAKGEEEERIRGLDLGADDYVTKPFSPREvvarvrallrrSG-  119
            + RE+R +  + P+LM+TA +++E++IR++D  ADDYVTKPF  R ++ RV ALLRRSG 
Sbjct  64   LLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  120  LKAELAFGELVIRPREREAYLAGEPLALSKLEFDLLLTLAQHPRLVWSRERLLERVWGTD  179
            L  E+  G L + P +      G  L+L++ EF++LL L Q+     ++E +L R+WG D
Sbjct  123  LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  180  FPGVDRVVDVHIAGLRKKLGEDGDNPRYIETVRGVGYRFQEE  221
            F G +  V+ HI  LR KL E+      I T+RGVGYR++E 
Sbjct  183  FDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

202) Gobs_2351 in NC_013757


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 90/221 (41%), Positives = 142/221 (65%), Gaps = 7/221 (3%)

Query  11   VLIIEDDDRIRRVVSITLRREGLEVTEAGSGEEGLARLAERPYDIVLLDLVLPGRSGLEV  70
            +L++EDDD+I   V   L     EV     G+E+ +++ E  Y++V+LD++LPG +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  71   CREIRRVSTTPVIMVTARADSSDVIAGLEAGADDYVTKPFVAEELSARIRALARRTGGSG  130
             RE+R  + TP++M+TA +D  + I +++A ADDYVTKPF    L  R+ AL RR+G+ +
Sbjct  65   LREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGALA  124

Query  131  PRPRIVVGDLEIAPADGVVTRGGEVVPltrteftlllelateRGRVFSREELLERVWGYD  190
               R  VG L + P D  V  +G  +PLTR EF +LL L  ++GR +++E +L R+WGYD
Sbjct  125  KEFR--VGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  191  YFGDSRLVDVHVRRLRKKVEADPAAPTVVTTVRGMGYRLPE  231
            + GD+  V+ H++ LR K+     +  ++ T+RG+GYRL E
Sbjct  183  FDGDGSTVHTHIKNLRAKL-----PENIIKTIRGVGYRLEE  218

203) UWK_01389 in NC_020304


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  123 bits (451),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 92/224 (42%), Positives = 152/224 (68%), Gaps = 7/224 (3%)

Query  1    MRILIVDDEENLVEQIRLALTQQKYTVDTAFDGEEALEKIYVEPYDLILLDIMLPKRDGF  60
            +RIL+V+D++++ + +R  L++ +Y VD+  DG+EA  K+Y + Y+L++LDIMLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   GVLFELRDEKNSTPVLMLTAKGAIEDKIKGLDMGADDYLAKPFSmeellarmrallrrSN  120
             +L E+R +++ TP+LM+TA +  E++I+++D  ADDY++KPF M  LL R+ ALLRRS 
Sbjct  63   ELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  121  ELVSPVLEVNTITLDPAKREVHKDGQLIELTLKEFSILEFLMYNINRAISRVSIAEHVWG  180
             L    + V  +TL P    V  DG  + LT KEF IL +L+ N  R++++  I  ++WG
Sbjct  122  ALAKE-FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  DEFDPWTMSNSIDVHIKNLRKKIDDSKGQIIRTVRGVGYIIKDD  224
             +FD    +++++ HIKNLR K+ ++   II+T+RGVGY + + 
Sbjct  181  YDFD--GDGSTVHTHIKNLRAKLPEN---IIKTIRGVGYRLEES  219

204) CKL_2350 in NC_009706


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 145/223 (66%), Gaps = 6/223 (2%)

Query  1    MNKTVLMVDDEERMRLLIEAYLKREGLKVLLAENGEEALRKFKENHVDLVVLDIMMPLMD  60
            M+  +L+V+D++++   + A+L      V    +G+EA  KF EN  +LV+LDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWTVCRELRKISNVPIIMLTARGEDEDQLLGFQLGTDSYVTKPVSPKILVAKIKALLRRT  120
            G  + RE+R  ++ PI+M+TA ++DE+Q+ +F+  +D YVTKP   +IL+ ++ ALLRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  YYDEINQVKDNTYDGLFINEEGHEVKIDGENIYLSPKEFEFLCYLIKNKDIVLSREKILD  180
                    K+   + L +  E+  V  DG ++ L+ KEFE+L  L++NK+  L++E IL 
Sbjct  121  ----GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  181  AIWGIDYYGDLRTVDTHVKRLREKLGVKSYLITTVRGVGYKFE  223
             IWG D+ GD  TV+TH+K LR KL  +  +I T+RGVGY++E
Sbjct  177  RIWGYDFDGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLE  217

205) CKR_2070 in NC_011837


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 145/223 (66%), Gaps = 6/223 (2%)

Query  1    MNKTVLMVDDEERMRLLIEAYLKREGLKVLLAENGEEALRKFKENHVDLVVLDIMMPLMD  60
            M+  +L+V+D++++   + A+L      V    +G+EA  KF EN  +LV+LDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWTVCRELRKISNVPIIMLTARGEDEDQLLGFQLGTDSYVTKPVSPKILVAKIKALLRRT  120
            G  + RE+R  ++ PI+M+TA ++DE+Q+ +F+  +D YVTKP   +IL+ ++ ALLRR+
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  YYDEINQVKDNTYDGLFINEEGHEVKIDGENIYLSPKEFEFLCYLIKNKDIVLSREKILD  180
                    K+   + L +  E+  V  DG ++ L+ KEFE+L  L++NK+  L++E IL 
Sbjct  121  ----GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  181  AIWGIDYYGDLRTVDTHVKRLREKLGVKSYLITTVRGVGYKFE  223
             IWG D+ GD  TV+TH+K LR KL  +  +I T+RGVGY++E
Sbjct  177  RIWGYDFDGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLE  217

206) Cphy_2827 in NC_010001


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 75/181 (42%), Positives = 123/181 (68%), Gaps = 12/181 (6%)

Query  52   ELILLDVMLPNEDGLSILSNVRKDSKTENIPIMMVTAKTTEMDKVKGLDLGADDYITKPF  111
            +L++LD+MLP  +G  +L + R ++ T   PI+M+TA + + ++++++D  ADDY+TKPF
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQNDT---PILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  112  GIMELVSRVKALLRRAGGNGQN--VGALSFHDVSLHVEKHSVTVDGESCELTYKEFELLR  169
             +  L+ RV ALLRR+G+ +++  VG L+     L  E   V  DG    LT KEFE+L 
Sbjct  105  KMRILLKRVEALLRRSGALAKEFRVGRLT-----LLPEDFRVLCDGTELPLTRKEFEILL  159

Query  170  YLLENQGIVLSRDRIMERVWGFDYEGESRTVDMHIKTLRHKLGAGGDIIKTVRNVGYKIG  229
             L++N+G  L+++ I+ R+WG+D++G++ TV+ HIK LR KL    +IIKT+R VGY++ 
Sbjct  160  LLVQNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

Query  230  D  230
            +
Sbjct  218  E  218

207) Desde_1577 in NC_018017


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 87/214 (41%), Positives = 142/214 (67%), Gaps = 4/214 (1%)

Query  4    ILIVEDEEAINELVKRNLQLVGHHCASVFDGITAVSEIQCQSYDLIILDIMLPGLDGFEV  63
            IL+VED++ I + V+  L     +  +  DG  A + +  ++Y+L+ILDIMLPG++G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   IKH---AKNTPTIFLTAKDSLPDRLKGLSMGADDYLTKPFEMLELLARVEAVLRRTQKAA  120
            +++    ++TP + +TA     ++++++   ADDY+TKPF M  LL RVEA+LRR+   A
Sbjct  65   LREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGALA  124

Query  121  SCFEAGRVRIDFDSRQVFHDGQLVECTPKEYELLEVLVNNRNIALSRERLLELVWGYDFE  180
              F  GR+ +  +  +V+ DG  +  T KE+E+L +LV+N+  +L++E +L  +WGYDF+
Sbjct  125  KEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFD  184

Query  181  GDTRTVDVHIQKLRKKLGWEERIKTVYKLGYRLE  214
            GD  TV+ HI++LR KL  E+ IKT+  +GYRLE
Sbjct  185  GDGSTVHTHIKNLRAKLP-ENIIKTIRGVGYRLE  217

208) Mahau_0744 in NC_015520


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  122 bits (446),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 91/224 (41%), Positives = 149/224 (67%), Gaps = 13/224 (5%)

Query  6    ILVVDDEAHILELIRFNLENAGYKVEVAEDG-ETALKFCRQQVPDLIILDIMLPGIDGLE  64
            IL+V+D+ HI + +R  L +A Y V+   DG E+  KF  ++  +L+ILDIMLPG++G E
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFY-ENTYQLVILDIMLPGMNGHE  63

Query  65   VCKTLRASVATAKVPIIMLTAKGEEIDKVVGLEIGADDYIAKPFGIRELIARVKALLRRT  124
            +   LR   A    PI+M+TA +++ +++ +++  ADDY++KPF +R L+ RV ALLRR+
Sbjct  64   L---LREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  125  ENNDMEPKIIKVGGLTIDTSKYEVYKNGNkldftlkefellkllvlNQGKVLSRDYLLDQ  184
                 E   ++VG LT+    + V  +G  L +T KEFE+L LLV N+G+ L+++ +L +
Sbjct  121  GALAKE---FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  185  VWGYEYFGETRTVDVHIRHIRQKLGDDMDEAKYIETIRGVGYKF  228
            +WGY++ G+  TV+ HI+++R KL +++     I TIRGVGY++
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRL  216

209) CYB_2856 in NC_007776


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  121 bits (443),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 92/223 (42%), Positives = 144/223 (65%), Gaps = 13/223 (5%)

Query  24   LLVVDDEDAIRETVALALEEQGYQVLQAADGRQALEMVHTVERLDLMILDLMLPSLNGLD  83
            +L+V+D+D I +TV   L E  Y+V   +DG +A       +  +L+ILD+MLP++NG +
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYE-NTYQLVILDIMLPGMNGHE  63

Query  84   LCRLLRREGNTIPILMLTAKSSETDRVVGLELGADDYLTKPFGMRELIARCRSVLRRQQL  143
            L R +R + +T PILM+TA S + +++ +++  ADDY+TKPF MR L+ R  ++LRR   
Sbjct  64   LLREFRAQNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--  120

Query  144  AQASDATVLRYGDLCMFTQECRVLVRGVEVSFSPKEFRLLELFMSNPRRVWTREQLLERI  203
              ++ A  +R G L ++ ++ RVL  G E++++ KEF +L L++ N  R  T+E +L RI
Sbjct  121  --GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  204  WGSDFMGDSKTVDVHIRWLREKLELDPSNPEYLV-TVRGFGYR  245
            WG DF GD+ TV+ HI+ LR KL      PE ++ T+RG GYR
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKL------PENIIKTIRGVGYR  215

210) RUM_03870 in NC_021039


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  121 bits (441),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 76/179 (43%), Positives = 121/179 (68%), Gaps = 7/179 (3%)

Query  45   DLVLLDIMLPEEDGLSILKKLRSNPPTRKLPILMLTAKGSEYDKVIGLDCGADDYVPKPF  104
            +LV+LDIMLP  +G  +L+ +R++  T   PILM+TA + + +++ ++D  ADDYV KPF
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQNDT---PILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  105  GMMELIARVKALLRRTERKDPQPEHTIRGLYVCPAKHIVTVDGEPVSLTLKEFEMLCVFL  164
             M  L+ RV ALLRR+       E  +  L + P    V  DG  ++LT KEFE+L +++
Sbjct  105  KMRILLKRVEALLRRSG--ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLV  162

Query  165  ENRNVVLTRDQLLNKVWGYAFDGESRTVDVHIRSLRQKLGEYADVIETVRGIGYKLSEP  223
            +N+   LT++ +L+++WGY FDG++ TV+ HI++LR KL E  ++I T+RG+GY+L E+
Sbjct  163  QNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEES  219

211) Krad_3815 in NC_009664


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  121 bits (441),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 144/221 (66%), Gaps = 6/221 (2%)

Query  1    MRGRVLVVDDDTALAEMLGIVLQGEGLETRFCADGDQAVGAFRATRPDLVLLDLMLPGTD  60
            M  R+L+V+DD  + + +   L     E   C+DG++A   F     +LV+LD+MLPG +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCRQIRAESGVPIVMLTAKSDTVDVVLGLEAGADDYVVKPFKPKElvarvrarlrSA  120
            G E+ R++RA+++ PI+M+TA SD  + + +++A ADDYV KPFK + L+ RV A LR +
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  121  GERPPETLRIGDLTIDVAGHSVRRDGRSLPLTPLEFELLVTLARKPWQAFTRELLLEQVW  180
            G  + E +R+G LT+   +  V  DG  LPLT  EFE+L+ L ++  +++T+E++L ++W
Sbjct  121  GALAKE-FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYRHAADTRLVNVHVQRLRSKIERDPEHPEIVVTVRGVGYR  221
            GY   +D   V+ H++ LR+K+   PE+  I+ T+RGVGYR
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKL---PEN--IIKTIRGVGYR  215

212) Sulac_0734 in NC_016884


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 147/221 (67%), Gaps = 8/221 (3%)

Query  3    RILVVDDEPAILELVSYNLVREGFEVISEQDGEMGLTRAMNESFDLVVLDVMLPGRSGLD  62
            RIL+V+D+  I + V   L    +EV +  DG+ + T+  +++++LV+LD+MLPG +G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VCRAIRQTKDIPIIMLTARKDEVDRVLGLELGADDYVTKPFSPRELVARVKAILRRSAKG  122
            + R +R  +D PI+M+TA  D+ +++ +++  ADDYVTKPF  R L+ RV A+LRRS+  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG--  121

Query  123  RDTGDEIRFPGLTINLERRMVTVDGQPVNltftefelltILARHPGRAFSREELLVRVWG  182
               + E+R   LT+  E   V  DG  + LT  EFE+L +L ++ GR++++E +L R+WG
Sbjct  122  -ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  DDFYGDSRTVDVHVRHLREKLKEDPSSPRFIETVRGVGYRF  223
             DF GD+ TV+ H+++LR KL E+     +I T+RGVGYR+
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRL  216

213) vicR in NC_015757


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 147/221 (67%), Gaps = 8/221 (3%)

Query  3    RILVVDDEPAILELVSYNLVREGFEVISEQDGEMGLTRAMNESFDLVVLDVMLPGRSGLD  62
            RIL+V+D+  I + V   L    +EV +  DG+ + T+  +++++LV+LD+MLPG +G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VCRAIRQTKDIPIIMLTARKDEVDRVLGLELGADDYVTKPFSPRELVARVKAILRRSAKG  122
            + R +R  +D PI+M+TA  D+ +++ +++  ADDYVTKPF  R L+ RV A+LRRS+  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG--  121

Query  123  RDTGDEIRFPGLTINLERRMVTVDGQPVNltftefelltILARHPGRAFSREELLVRVWG  182
               + E+R   LT+  E   V  DG  + LT  EFE+L +L ++ GR++++E +L R+WG
Sbjct  122  -ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  DDFYGDSRTVDVHVRHLREKLKEDPSSPRFIETVRGVGYRF  223
             DF GD+ TV+ H+++LR KL E+     +I T+RGVGYR+
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRL  216

214) Syncc9605_1618 in NC_007516


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  119 bits (436),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 93/229 (41%), Positives = 148/229 (65%), Gaps = 15/229 (6%)

Query  26   RLLVVEDDDSIRETVGEALRAEGFEVHTCADGASALTLITAGSSDPVDLIVldlmlpglg  85
            R+L+VEDDD I +TV   L    +EV++C+DG  A T +   + +   L++LD+MLPG+ 
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQ---LVILDIMLPGMN  60

Query  86   gldlCRELRRLNNTTPILVISARDSETDRVLGLEVGADDYLVKPFGLRELVARCRALLRR  145
            G +L RE+R  +N TPIL+++A   + +++ +++  ADDY+ KPF +R L+ R  ALLRR
Sbjct  61   GHELLREFRA-QNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  146  SSQSETSPSQPHSFTHANLCLFPSECRVTRDGTDLTLSPKEYKILELFIQNPKRVWSRDQ  205
            S+      + +  F  + L L+P + RV  DGT+L L+ KE+ IL L++QN  R  +++ 
Sbjct  120  SG------ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  206  LLEKIWGVDFIGDTKTVDVHIRWLREKVEQEPSSPQLIRTVRGFGYRFG  254
            +L +IWG DF GD  TV+ HI+ LR K+ ++     +I+T+RG GYR+ 
Sbjct  174  ILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

215) phoP in NC_018870


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  119 bits (433),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 95/231 (42%), Positives = 151/231 (66%), Gaps = 14/231 (6%)

Query  1    MPPRILVVDDEDVIVKLVSYNLKKEGFEVITAGDGQEAWEKIRQEKPDLVILDVMLPGMD  60
            M+ RIL+V+D+D I + V   L    +EV +  DG+EA  K+ ++  +LVILD+MLPGM+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFSLCRLLRQEKMMTPVLMLTAKDEEIDRVLGLEIGADDYLTKPFSPRELIARVRAILrr  120
            G  L R +R ++  TP+LM+TA  ++ +++ +++  ADDY+TKPF  R L+ RV A+LRR
Sbjct  61   GHELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  tgerrtgqeeqLEF--GELVVYPARYEVRRGGEQIELTPREFEllllllRNAGLVMSREY  178
            +G          EF  G L + P  + V  +G ++ LT +EFE+LLLL++N G  +++E 
Sbjct  120  SGALAK------EFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  179  ILQKLWGDDFYGDDRVVDVHIRHLREKIEREPGNPVYIKTVRGVGYKFQPP  229
            IL ++WG DF GD+  V+ HI++LR K+  +      IKT+RGVGY+++ +
Sbjct  174  ILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

216) CCU_10100 in NC_021018


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  118 bits (430),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 92/224 (42%), Positives = 153/224 (69%), Gaps = 7/224 (3%)

Query  1    MAVHIYIVEDDKNIREIEMFALKNSGYAVEEFENAKSFFSRSAEKVPDLVLLDIMLPDMD  60
            M+++I +VEDD +I +     L ++ Y V+   +++   ++  E+  +LV+LDIMLP+M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEIVKKLRSRPDTVRVPIILVTAKTTELDKVKGLDIGADDYLTKPFGVMELISRVKALL  120
            G E+++ +R++ DT   PI+++TA + + ++++++D  ADDY+TKPF +  L+ RV ALL
Sbjct  61   GHELLREFRAQNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALL  117

Query  121  RRSRALQDDKQLVLGDITLDSERREVHVGGelceltfkefellkllMVNAGIVLHRDTIM  180
            RRS AL   K++ +G +TL +E   V  +G    LT KEFE+L LL+ N G  L ++ I+
Sbjct  118  RRSGAL--AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  181  SDVWGTDYEGESRTLDMHIKTLRQKLGEAGNMIKTVRNVGYKME  224
            S +WG D++G++ T++ HIK LR KL E  N+IKT+R VGY++E
Sbjct  176  SRIWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

217) Desku_2766 in NC_015573


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  118 bits (430),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 134/222 (61%), Gaps = 9/222 (4%)

Query  3    RILLVDDEISIKRVVEQTLEREGFTVDYAADGLAARELFTRRQPDLVILDVMLPEIDGFE  62
            RILLV+D+  I   V   L    + VD  +DG  A+  F     +LVILD+MLP ++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRRWREVSDVPILILSAKGDIVDKSVGFNCGADDYLTKPFSPVELALRVKALLRRSRQG  122
            L R  R  +D PIL+++A +D  ++  +F+  ADDY+TKPF    L  RV ALLRRS  G
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS--G  121

Query  123  RMDRSDRVEAAGLQIDAFQRRVWVEGREVELTPKEFDLLWFLARHPGRVFTREQIFAHVW  182
             + +  RV    L  + F  RV  +G E+ LT KEF++L +L ++ GR +T+E I++++W
Sbjct  122  ALAKEFRVGRLTLLPEDF--RVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GDDVLSDLSTVTVFMRRLREKIEADPRKPRYLKTIWGVGYKF  224
            G D  +D STV   ++ LR K+  +      +KTI+GVGY++
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRL  216

218) ROP_pROB01-01890 in NC_012520


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  118 bits (431),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 143/220 (65%), Gaps = 6/220 (2%)

Query  1    MRILLVEDEARLAETVRRGLTAEGFVVDVAREGCDGLEQAVTGDFDVVVLDIMLPGMHGY  60
            +RILLVED+ ++ +TVR  L+   + VD   +G ++  +     +++V+LDIMLPGM+G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   QILRELRARQVWTPVLMLSAKDGEYDQADAFDLGADDYLTKPFSFVIlvarlrallrrga  120
            ++LRE+RA++  TP+LM++A  ++ +Q  AFD  ADDY+TKPF   IL+ R+ ALLRR++
Sbjct  63   ELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  121  perpaILTAGNLALDPARRRVSRGEDVLALTPREYGVLEFLLRNKGDVVSKAEILRSVWD  180
            +     +  G L+L P   RV  +   L+LT +E+ +L +L++NKG  ++   IL  +W+
Sbjct  122  ALAKE-FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  SNYDGDDNVVEVYIGYLRRKIDAPFGMATIETVRGVGYRL  220
             ++DGD++ V+  I  LR K+        I T+RGVGYRL
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPE----NIIKTIRGVGYRL  216

219) Cbei_3359 in NC_009617


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  117 bits (428),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 153/222 (69%), Gaps = 8/222 (3%)

Query  1    MKINILIVEDDEAISNLIRISLGMAGYQCKQTFDGMEAFNLIKQESFDLILMDIMLPGID  60
            M I IL+VEDD+ I N +R  L+ A Y+     DG EA   + +++++L+++DIMLPG++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFELMKRIKSLN-VPVIFLTAKNGLADKITGLKSGAEDYIVKPFETVELLARIEIVLRRY  119
            G EL++ +++ N  P++ +TA ++  ++I ++ + A+DY+ KPF    LL R+E +LRR 
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  120  SKNNNCIEFK--RLKIYEDE-RIIKNGDETIDltlkefelilllVKNKNMALSREYLLEK  176
            +   +  EF+  RL +  ++ R++ +G E + LT KEFE++LLLV+NK  +L++E +L +
Sbjct  121  GALAK--EFRVGRLTLLPEDFRVLCDGTE-LPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  177  IWGYEYMGETRTIDTHIQKIRKKLDIAENIKTVYKIGYRLEE  218
            IWGY++ G+  T++THI+++R KL   + IKT+  +GYRLEE
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLP-ENIIKTIRGVGYRLEE  218

220) RTO_22740 in NC_021015


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 92/218 (43%), Positives = 142/218 (66%), Gaps = 7/218 (3%)

Query  5    VEDDDNIRELVIYTLETTGLEARGFADGTAFMEALAFDTPELVLLDIMLPGEDGLEILKK  64
            VEDDD+I + V   L  +  E  + +DG      +  +T +LV+LDIMLPG +G E+L+ 
Sbjct  8    VEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHELLRE  67

Query  65   LKNSSKTKDIPVIMVTAKGSEYDKVVGLDSGADDYVTKPFGMMELISRIKAVLRRSGKQQ  124
            ++  +   D P++M+TA + + +++ ++D+ ADDYVTKPF M  L+ R+ A+LRRSG   
Sbjct  68   FRAQN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGALA  124

Query  125  DKTKLSVGGISLDTKKHEVKVDGEQVVltlkefelleklMRNQGIVLTRDQLLTEIWGYD  184
                + VG ++L      V  DG ++ LT KEFE+L  L++N+G  LT++ +L+ IWGYD
Sbjct  125  --KEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  185  FDGETRTVDVHIRTLRQKLGEQGSLVKTVRGVGYRIGG  222
            FDG+  TV+ HI+ LR KL E  +++KT+RGVGYR+  
Sbjct  183  FDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

221) Tter_1435 in NC_013525


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 91/220 (42%), Positives = 141/220 (65%), Gaps = 7/220 (3%)

Query  7    RILVIEDEHQIADLLRRGLTFKGYLVDTAASGEEGLDKARDNPPDLVILDLMLPEMSGEE  66
            RIL++ED+++I + +R  L+   Y VD+ + G+E+  K  +N  +LVILD+MLP M+G+E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  67   VCRRLREGLDPDLPIIILTAKDATEDKIAGLDAGADDYITKPFNFEEllariraslrrrQ  126
            + R +R   + D PI+++TA    E++I ++DA ADDY+TKPF+   LL R+ A LRR  
Sbjct  64   LLREFRA--QNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  127  PQEKSIIRVGDLTLNLASREAMRGERKLDLTTREFDLLEFLARNEGHVVSKEAIFERVWG  186
            +  K + RVG LTL       + +   L LT +EF++L +L +N G+ ++ E I+ R+WG
Sbjct  122  ALAKEF-RVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  187  YSFDIDSDAVKVYISYLRSKLTAGGEPDMIHTIRGIGYML  226
            Y FD D+ +V   I  LR+KL      ++I TIRG+GY L
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPE----NIIKTIRGVGYRL  216

222) BCK_11070 in NC_018491


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 94/230 (41%), Positives = 149/230 (65%), Gaps = 11/230 (4%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++   +Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLL-ES  119
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  S
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  120  RKVTKQFLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYFMRNQGIVLTRE  179
              ++K+F     + L++  +  +F    V  D T++ LT+ EFEIL  +++N+G  LT+E
Sbjct  121  GALAKEF---RVGRLTL--LPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHE  172

Query  180  QLISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGSV  229
             ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E S+
Sbjct  173  IILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEESL  220

223) BCE_4969 in NC_003909


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 147/229 (65%), Gaps = 9/229 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYIVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++   +Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALL--R  118

Query  121  KVTKQLLENEDDTLSIHGIHVHFPSRTVMVDKTDINLTHTEFEILAYFMKNQGIVLTREQ  180
            +      E   + L++  +  +F    V+ D T++ LT+ EFEIL  +++N+G  LT+E 
Sbjct  119  RSGALAKEFRVGRLTL--LPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV  229
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E ++
Sbjct  174  ILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEESL  220

224) YBT020_23760 in NC_017200


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 146/229 (64%), Gaps = 9/229 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++   +Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALL--R  118

Query  121  KVTKQLLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYLMKNQGIVLTREQ  180
            +      E   + L++  +  +F    V  D T++ LT+ EFEIL  L++N+G  LT+E 
Sbjct  119  RSGALAKEFRVGRLTL--LPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV  229
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E ++
Sbjct  174  ILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEESL  220

225) BCAH187_A4952 in NC_011658


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  115 bits (419),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 146/229 (64%), Gaps = 9/229 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeevvdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++   +Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALL--R  118

Query  121  KITKQLLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYLMKNQGIVLTREQ  180
            +      E   + L++  +  +F    V  D T++ LT+ EFEIL  L++N+G  LT+E 
Sbjct  119  RSGALAKEFRVGRLTL--LPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV  229
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E ++
Sbjct  174  ILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEESL  220

226) BCN_4728 in NC_016771


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  115 bits (419),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 146/229 (64%), Gaps = 9/229 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeevvdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++   +Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALL--R  118

Query  121  KITKQLLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYLMKNQGIVLTREQ  180
            +      E   + L++  +  +F    V  D T++ LT+ EFEIL  L++N+G  LT+E 
Sbjct  119  RSGALAKEFRVGRLTL--LPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV  229
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E ++
Sbjct  174  ILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEESL  220

227) BCQ_4626 in NC_011969


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  115 bits (419),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 146/229 (64%), Gaps = 9/229 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeevvdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++   +Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALL--R  118

Query  121  KITKQLLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYLMKNQGIVLTREQ  180
            +      E   + L++  +  +F    V  D T++ LT+ EFEIL  L++N+G  LT+E 
Sbjct  119  RSGALAKEFRVGRLTL--LPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV  229
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E ++
Sbjct  174  ILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEESL  220

228) AM1_4053 in NC_009925


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 95/232 (41%), Positives = 147/232 (64%), Gaps = 16/232 (6%)

Query  1    MKTRILVIDDDPAIAELVAINLEMAGYDVAQATDGIKGQALAVQllpdliildlmlpKVD  60
            M  RIL+++DD  I + V   L  A Y+V   TDG  +++   +   +L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GFTICQRLRRDQRT-ADIPILMLTALSQTQDKVEGFNAGADDYLTKPFELEEMLARVRAL  119
            G    + L R+ R+  D PILM+TALS+ ++++ +F+A ADDY+TKPF +  +L RV AL
Sbjct  61   G----HELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEAL  116

Query  120  LRRTDRIPQAARHSEILSYGPLTLVPERFEVLWVDKVIKLTRLEFELLHCLLQRHGQTVS  179
            LRR++ +++  R       G LTL+PE F VL  +  + LTR EFE+L  L+Q  G+T++
Sbjct  117  LRRSGALAKEFRV------GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  180  PSEILQEVWGYDPNDDIETIRVHVRHLRTKLEPDPRHPQYIKTVYGAGYCLE  231
               IL  +WGYD ++D  T++ H+++LR+KL  +      IKT+ G GY LE
Sbjct  171  HEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLE  217

229) SC8F4.07 in NC_003888


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 135/221 (62%), Gaps = 4/221 (1%)

Query  1    MRLLIVEDEKRLAVSLAKGLTAEGYAVDVVHDGLEGLHRAGEGVYDLVILDIMLPGLNGY  60
            +R+L+VED+ ++  ++   L+   Y VD   DG E+  +  E  Y+LVILDIMLPG+NG 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   RVCAALRAAGHDVPILMLTAKDGEYDEAEGLDTGADDYLTKPFSYvvlvarvkallrrrG  120
             +   +RA  +D PILM+TA  ++ ++  ++D+ ADDY+TKPF   +L+ RV ALLRR G
Sbjct  63   ELLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  121  QGAGASPVHVHGDLRVDTAARRVFLGEDEATLTAKEFAVLEQLVVRAGQVVSKAEILEHV  180
              A    V   G L +     RV+ +  E  LT KEF +L  LV   G+ ++   IL ++
Sbjct  122  ALAKEFRV---GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WDFAYDGDPNIVEVYVSALRRKLRAGLIRTVRGAGYRLETG  221
            W++ +DGD + V+  +  LR KL   +I+T+RG GYRLE +
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

230) Dtur_0537 in NC_011661


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  114 bits (414),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 95/226 (43%), Positives = 150/226 (67%), Gaps = 12/226 (5%)

Query  1    MKILIIEDEKKLGTALKKGLEKEGYVVDLAFDGEEAKYIIENNF--EGYDLVILDIMLPK  58
            ++IL++ED+  +  +++  L    Y VD   DG+EA    + +F  + Y+LVILDIMLP 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEA----HTKFYENTYQLVILDIMLPG  58

Query  59   IDGISLCKDLRAKNFQAPILMLTAKDKVEDKILGLESGADDYLVKPFSYEEllarirall  118
            ++G  L +++RA+N ++PILM+TA    E++I ++++ ADDY+ KPF    LL R+ ALL
Sbjct  59   MNGHELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALL  117

Query  119  rrPKNLMPTVLKVKDISLDTVSKRVFRGDIEILLTNKEFAILEYLMRNVNRIISKEQIIS  178
            RR+  L +  ++V  ++L     RV+ ++ E+ LT KEF IL  L++N  R ++ E I+S
Sbjct  118  RRSGAL-AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  179  HVWGYESDTLSNVVEAHIKNLRKKLERKRDENIIETIRGMGYRIKE  224
            ++WGY+ D  ++ V++HIKNLR KL     ENII TIRG+GYR+ E
Sbjct  177  RIWGYDFDGDGSTVHTHIKNLRAKLP----ENIIKTIRGVGYRLEE  218

231) Dacsa_1571 in NC_019780


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  114 bits (414),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 139/225 (62%), Gaps = 8/225 (3%)

Query  1    MVARILIVEDEAKLAQFIELELQYEGYEVTIATDGFTGLTQARELNPDLLILDWMLPGIS  60
            M  RIL+VED+  + + +   L    YEV   TDG  + T+  E   +L+ILD MLPG++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEICRRLRQTNNTIPVILLTAKDEISDRVEGLDAGADDYVVKPFSIEELFARVRAHLRR  120
            G E+ R +R  N+T P++++TA  +  +++ ++DA ADDYV KPF +  L+ RV A LRR
Sbjct  61   GHELLREFRAQNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  121  NHEEETDTFQFSDLKLNTST-REVCRRDRAIELTAKEFELLRYLLLHPRQVLTRDQILER  179
            +     + F+ + L L     R +C  +  + LT KEFE+L  L+ +  + LT++ IL R
Sbjct  120  SGALAKE-FRVGRLTLLPEDFRVLCD-GTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  180  VWGYDFMGDSNIIEVYIRYLRLKLEEKGEPRIIQTVRGVGYVLRE  224
            +WGYDF GD++ ++  I+ LR KL E+    II+T+RGVGY L E
Sbjct  178  IWGYDFDGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEE  218

232) CYA_1033 in NC_007775


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  114 bits (414),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 87/214 (41%), Positives = 136/214 (64%), Gaps = 13/214 (6%)

Query  37   ETVAVALEEQGYQVLQAADGRQALELVHTAERLDLMILDLMLPGLNGLDLCRLLRREGNT  96
            +TV   L E  Y+V   +DG +A       +  +L+ILD+MLPG+NG +L R +R + +T
Sbjct  16   NTVRAFLAEARYEVDACTDGNEAHTKFY-ENTYQLVILDIMLPGMNGHELLREFRAQNDT  74

Query  97   IPILMLTAKSSETDRVVGLELGADDYLTKPFGMRELIARCRSVLRRRQQSHASEATVLRY  156
             PILM+TA S + +++ +++  ADDY+TKPF MR L+ R  ++LRR     ++ A  +R 
Sbjct  75   -PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS----GALAKEFRV  129

Query  157  GDICMFTQECRVLVRGVEVSFSPKEFRLLELFMSNPRRVWTREQLLERIWGSDFMGDSKT  216
            G + ++ ++ RVL  G E++++ KEF +L L++ N  R  T+E +L RIWG DF GD+ T
Sbjct  130  GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFDGDGST  189

Query  217  VDVHIRWLREKLELDPSNPEYLV-TVRGFGYRFG  249
            V+ HI+ LR KL      PE ++ T+RG GYR+ 
Sbjct  190  VHTHIKNLRAKL------PENIIKTIRGVGYRLE  217

233) Cyagr_1052 in NC_019675


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  113 bits (411),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 95/231 (42%), Positives = 152/231 (66%), Gaps = 15/231 (6%)

Query  17   MHPPLLVVEDDDTIRETIRDVLVLEGFSVTACGNGTEALRTLQECPPGEEFSlvvldlml  76
            M   +L+VEDDD I +T+R  L    + V AC +G EA   + E    + + LV+LD+ML
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYE----NTYQLVILDIML  56

Query  77   pglggldlCRQLRSAGNQTPILVVSARDSETDRVLGLEVGADDYLIKPFGLRELVARCRA  136
            PG+ G +L R++R+  N+TPIL+++A   + +++ +++  ADDY+ KPF +R L+ R  A
Sbjct  57   PGMNGHELLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEA  115

Query  137  LMRRSRSVEVAAKVLQHANLSLYPEECRVTRDGLEVNLSPKEYRLLELFMQNPRRVWSRD  196
            L+RRS ++   AK ++ + L+L PE+ RV  DG E+ L+ KE+ +L L++QN  R  +++
Sbjct  116  LLRRSGAL---AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHE  172

Query  197  KLLERVWGYDYFGDSKTVDVHIRWLREKLEANPSAPEHLI-TVRGFGYRFG  246
             +L R+WGYD+ GD+ TV+ HI+ LR KL      PE++I T+RG GYR+ 
Sbjct  173  IILSRIWGYDFDGDGSTVHTHIKNLRAKL------PENIIKTIRGVGYRLE  217

234) BC4810 in NC_004722


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  113 bits (413),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 146/229 (64%), Gaps = 9/229 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++   +Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALL--R  118

Query  121  KVTKQLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHTEFEILAYFMKNQGIVLTREQ  180
            +      E   + L++  +  +F    V  D T++ LT+ EFEIL  +++N+G  LT+E 
Sbjct  119  RSGALAKEFRVGRLTL--LPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNI  229
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E ++
Sbjct  174  ILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEESL  220

235) BCB4264_A4937 in NC_011725


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  113 bits (413),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 146/229 (64%), Gaps = 9/229 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++   +Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALL--R  118

Query  121  KVTKQLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHTEFEILAYFMKNQGIVLTREQ  180
            +      E   + L++  +  +F    V  D T++ LT+ EFEIL  +++N+G  LT+E 
Sbjct  119  RSGALAKEFRVGRLTL--LPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV  229
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E ++
Sbjct  174  ILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEESL  220

236) ELI_1637 in NC_014624


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 150/227 (67%), Gaps = 10/227 (4%)

Query  3    KILIIEDELNIFELIKFNLEAQGFEVAGVHEGTGAVEKIVDIRPDLIILDLMLPGKDGLT  62
            +IL++ED+ +I + ++  L    +EV +  +G  A  K+ +   +L+ILD+MLPG +G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   ICREVRADKNLSYIPVIMLTAKSEEFDKVLGLEMGADDYMTKPFSVKELYARVKAVLRRT  122
            + RE RA+++    P++M+TA S++ +++ +++  ADDY+TKPF ++ L  RV A+LRR+
Sbjct  64   LLREFRAQND---TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  123  EMIKSSDTEEIAVGSLRILPGSFEVYKNGkklsltlkeyelllylannknkvlTRDQLLD  182
              +    + E+ VG L +LP  F V  +G  L+LT KE+E+LL L +NK + LT++ +L 
Sbjct  121  GAL----AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  EIWGYEYYGETRTVDVHIRYLRKKIEDDQEKYIETVRGVGYRLVENL  229
             IWGY++ G+  TV+ HI+ LR K+    E+ I T+RGVGYRL E+L
Sbjct  177  RIWGYDFDGDGSTVHTHIKNLRAKL---PENIIKTIRGVGYRLEESL  220

237) Athe_0280 in NC_012034


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 138/222 (63%), Gaps = 6/222 (2%)

Query  1    MRILVIEDQKSLANTIARRLQEVGYSVDMALDGQEGLNFIQTASYDLIILDIMLPKIDGI  60
            +RIL++ED+  + NT+   L E  Y VD   DG+E+   +   +Y+L+ILDIMLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   TLLKLVRNKGVQTPVLCLTAKDSIEDRVTGLDAGADDYLVKPFSFDEllarvrallrrYS  120
             LL+  R +  +TP+L +TA    E+++ ++DA ADDY+ KPF    LL RV ALLRR +
Sbjct  63   ELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  121  QIKDPIIQIKDLVIDTNSRKVTRAGKVIDLTSKEYSVLEYLARNKGRVLTRSQIAEHVWN  180
             +   + ++  L +  +  +V   G  + LT KE+ +L  L +NKGR LT+  I  ++W 
Sbjct  122  ALAKEF-RVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFEGTSNIVDVYIRYLRRKIDDGFPEKLIHTIRGVGYMLRD  222
            YDF+G ++ V+  I+ LR K+    PE++I TIRGVGY L +
Sbjct  181  YDFDGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEE  218

238) Marky_0243 in NC_015387


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  110 bits (399),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 96/222 (44%), Positives = 147/222 (67%), Gaps = 9/222 (4%)

Query  3    RVLVVDDDPAIREVLAAYLARERFEVLEAEDGLQALEQ--APGADLVILDLMLPGMDGWR  60
            R+L+V+DD  I + + A+LA  R+EV    DG +A  +      +LVILD+MLPGM+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   VAQELRRDWPDLPILMLTArgeeeervrgfelgADDYVTKPFSPREvvarvrallrrvG-  119
            + +E+R +  D PILM+TA +++E+++R+F+  ADDYVTKPF  R ++ RV ALLRR G 
Sbjct  64   LLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  120  LKDELVYGPLVIRPRAREVLLEGQPVALSRLEFDLLLTLARHPGMVFTRERLLERVWGPG  179
            L  E+  G L + P    VL +G  ++L+R EF++LL L ++ G  +T+E +L R+WG +
Sbjct  123  LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  180  FEGVDRVVDVHVALLRKKLGDDAEHPRFIETVRGVGYRFRES  221
            F+G +  V+ H+  LR KL ++     +I T+RGVGYR+ ES
Sbjct  183  FDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

239) TSC_c17350 in NC_014974


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  110 bits (399),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 87/217 (41%), Positives = 135/217 (63%), Gaps = 1/217 (0%)

Query  1    MRLLVVEDDPRVGALVQEALEADGYAVDWAKSAEEALGLVRAFPYDLVVLDVMLPGMDGF  60
            +R+L+VEDD ++   V+  L    Y VD    ++EA        Y+LV+LD+MLPGM+G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   TFLEALRRQHKLPVLMLTARDATEDKVRGLEQGADDYLTKPFHlrelrarvrallrraHG  120
             +L  +R Q+  P+LM+TA    E+++R+++  ADDY+TKPF +R L  RV ALLRR+ G
Sbjct  63   ELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS-G  121

Query  121  EAANLVRRGRLTLDLEGKRVYWEGKEVRLSGREYALLEFLALNAGGVFPREVLLEKVWAG  180
              A+  R GRLTL  E+ RV  +G E+ L+ +E+ +L +L  N G  + +E++L ++W+ 
Sbjct  122  ALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  181  EEGVDPKVVDVYIYRLRQKLGQGAIETERGLGYSFRE  217
            + + D   V+  I  LR KL +  I T RG+GY + E
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

240) Gura_2556 in NC_009483


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  109 bits (398),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 65/160 (41%), Positives = 103/160 (65%), Gaps = 5/160 (3%)

Query  66   LLKKNEKTAAIPIIMLTAKGEEIDRVVGFEVGADDYMVKPFSTRELLLRVKAVLRRTMPE  125
            LL+        PI+M+TA +++ +++ +F+  ADDY+ KPF  R LL RV A+LRR+   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS---  120

Query  126  KTAEKRITIGLVTIDTERHLVNVAGEEIILTTTEFKLLLNLAERLGRVQSRDILLQNVWG  185
             +  K + +G +T+  E   V   G E+ LT  EF +LL L +  GR  +++I+L  +WG
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  186  YNYVGDSRTVDTHVTRLRTKLGEAGEMIKTVRGFGYKMEE  225
            Y++ GD+ TV+TH+  LR+KL E  ++IKT+RG GY++EE
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

241) K649_01130 in NC_021081


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 89/218 (41%), Positives = 138/218 (64%), Gaps = 9/218 (4%)

Query  3    RVLLVDDDPAIREVLGVYLRQEGCEVLEATNGLEALQLLPQA--DVVILDLMLPQLTGWQ  60
            R+LLV+DD  I + +  +L +   EV   T+G EA   + +   ++VILD+MLP + G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   VAQELRRDYPDLPLLMLTARGEEAERIQGLELGADDYVTKPFSPREvvarvrallrrSG-  119
            + +E+R +  D P+LM+TA +++ ++I++++  ADDYVTKPF  R ++ RV ALLRRSG 
Sbjct  64   LLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  120  FKQELVFGDLILRPRQREALFKGQALNLSKLEFDLLLTLAQHPGLVWSRERLLERVWGSD  179
            + +E+  G L L P +   L  G  L L++ EF++LL L Q+ G   ++E +L R+WG D
Sbjct  123  LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  180  FPGVDRVVDVHVAGLRKKLGEDAENPLYIETVRGVGYR  217
            F G +  V+ H+  LR KL E+      I T+RGVGYR
Sbjct  183  FDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYR  215

242) Mrub_0302 in NC_013946


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 89/218 (41%), Positives = 138/218 (64%), Gaps = 9/218 (4%)

Query  3    RVLLVDDDPAIREVLGVYLRQEGCEVLEATNGLEALQLLPQA--DVVILDLMLPQLTGWQ  60
            R+LLV+DD  I + +  +L +   EV   T+G EA   + +   ++VILD+MLP + G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   VAQELRRDYPDLPLLMLTARGEEAERIQGLELGADDYVTKPFSPREvvarvrallrrSG-  119
            + +E+R +  D P+LM+TA +++ ++I++++  ADDYVTKPF  R ++ RV ALLRRSG 
Sbjct  64   LLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  120  FKQELVFGDLILRPRQREALFKGQALNLSKLEFDLLLTLAQHPGLVWSRERLLERVWGSD  179
            + +E+  G L L P +   L  G  L L++ EF++LL L Q+ G   ++E +L R+WG D
Sbjct  123  LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  180  FPGVDRVVDVHVAGLRKKLGEDAENPLYIETVRGVGYR  217
            F G +  V+ H+  LR KL E+      I T+RGVGYR
Sbjct  183  FDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYR  215

243) Gura_1572 in NC_009483


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 65/160 (41%), Positives = 103/160 (65%), Gaps = 5/160 (3%)

Query  66   LLKKNEKTAAIPIIMLTAKGEEIDRVVGFEVGADDYMVKPFSTRELLLRVKAVLRRTMPE  125
            LL+        PI+M+TA +++ +++ +F+  ADDY+ KPF  R LL RV A+LRR+   
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS---  120

Query  126  KAQGKCITIGLVTIDTERHMVSVAGEEIVLTTTEFKLLLNLAERLGRVQSRDLLLQNVWG  185
             A +K + +G +T+  E   V   G E+ LT  EF +LL L +  GR  +++++L  +WG
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  186  YNYVGDTRTVDTHVTRLRTKLGEAGEMIKTVRGFGYKMEE  225
            Y++ GD  TV+TH+  LR+KL E  ++IKT+RG GY++EE
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

244) COB47_0270 in NC_014392


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  108 bits (393),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 139/222 (63%), Gaps = 6/222 (2%)

Query  1    MRILIVEDQESLAHTIARRLQEVGYSTDITFDGQEGLHFATSTSYDLIILDIMLPKIDGI  60
            +RIL+VED++ + +T+   L E  Y  D   DG+E+       +Y+L+ILDIMLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   NLLKLIRLKGIQTPVLCLTAKDSIEDRVIGLDAGADDYLVKPFSFDEllarirallrrYA  120
            +LL+ +R +  +TP+L +TA    E+++ ++DA ADDY+ KPF    LL R+ ALLRR +
Sbjct  63   ELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR-S  120

Query  121  QTREPIIKVKDLVIDTNSHKVTRAGKLIELTSKEYSILEYLARNKGRVLTRSQIAEHVWN  180
             +    ++V  L +  +  +V   G  + LT KE+ IL  L +NKGR LT+  I  ++W 
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFEGTSNIVDVYIRYLRRKIDDGFPEKLIYTIRGVGYMLRD  222
            YDF+G ++ V+  I+ LR K+    PE++I TIRGVGY L +
Sbjct  181  YDFDGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEE  218

245) Desaf_0871 in NC_016629


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 149/222 (68%), Gaps = 8/222 (3%)

Query  6    ILIVEDDEDILQLIKFNVESAGYDAITASDGLEALNKARRHmpdlilldlmlpgmdgFEV  65
            IL+VEDD++I + ++  +  A Y+  + +DG EA  K   +  +L++LD+MLPGM+G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  66   CKELKRGSETGRIPILMLTARGEEVDRIVGLELGADDYVVKPFSPREIILRVRAVLRRNK  125
             +E++  ++T   PILM+TA +++ ++I +++  ADDYV KPF  R ++ RV A+LRR+ 
Sbjct  65   LREFRAQNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS-  120

Query  126  GEEDVRQSWRRERLSVDMEAHRAEIDDQELLLTATEFKLLSELIRNPGRVLTREQLLNTV  185
                + +  R  RL++  E  R   D+ EL LT  EF +L  L++N GR LT+E +L+ +
Sbjct  121  --GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  186  WGYEFEGYARTVDTHVRRLRQKLGDYAKFVETVRGVGYRFKE  227
            WGY+F+G + TV+TH++ LR KL +  +++ T+RGVGYR+ E
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

246) GAU_2013 in NC_012489


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 137/218 (63%), Gaps = 6/218 (2%)

Query  1    MKILVIEDDPTVGEFVRRGLEEQRWQTDLCNNGLEGERMALSQPYDLVILDMRLPGRNGL  60
            ++IL++EDD  + + VR  L E R + D C +G E++     + Y+LVILD+ LPG NG 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   DVLRTLRSSGFERPVLVLTAQDAVDAKVETLRAGADDYVTKpfafeellaraeallrrpr  120
            ++LR +R+   + P+L++TA    + ++ ++ A ADDYVTKPF    LL R EALLRR+ 
Sbjct  63   ELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  121  alaSPQLRVGDLELDQGTREVLRAGELIELTPKEFAVLEYLMRHAGRVMSRTLITEYAWG  180
            AL + ++RVG L L      VL  G  + LT KEF +L  L+++ GR +++ +I    WG
Sbjct  122  AL-AKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YHFDPGTNIVDVVINHLRKKIDARFDKKLITTVRGVGY  218
            Y+FD + + V+  I++LR K+      ++I T+RGVGY
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPE----NIIKTIRGVGY  214

247) Moth_1131 in NC_007644


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 151/227 (67%), Gaps = 13/227 (5%)

Query  1    MRARILVVDDDAKITSMLKRALTYEGYDVEIaanghqalalaannP-DLIILDIMLPGID  59
            M  RIL+V+DD  I + ++  L+   Y+V+  ++G++A +   +N  +L+ILDIMLPG++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60

Query  60   GLAVCRQIRSNSDIPILMLTARDDTADRVLGLDTGADDYLVKPFaleellarirallrrr  119
            G  + R++R+++D PILM+TA  D  +++ ++D+ ADDY+ KPF +  LL R+ ALLRR 
Sbjct  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120

Query  120  sreteaeVLQFSDLTLNTSTREGFR---GQRSFSLTAKEYELLLYFLQNPHRVLTRDELM  176
            +  +    ++ + LTL     E+FR   +   ++LT KE+E+LL ++QN  R LT++ ++
Sbjct  121  GALAKE--FRVGRLTL---LPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  177  TRIWGYDFSGESNVLEVYIGYLRAKLEAGGEPRLIQTVRGVGYVLKE  223
            +RIWGYDF G+++ ++  I  LRAKL       +I+T+RGVGY L E
Sbjct  176  SRIWGYDFDGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEE  218

248) Deipr_2674 in NC_015163


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  106 bits (386),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 95/222 (43%), Positives = 140/222 (64%), Gaps = 13/222 (5%)

Query  4    ILIVDDDPAILEILRAYLKAEGHTVLEAC-DGYSAREQL--PRADLAILDWMLPGVSGVD  60
            IL+V+DD  I + +RA+L AE++  ++AC DG  A+ ++     +L ILD MLPG++G +
Sbjct  5    ILLVEDDDHICNTVRAFL-AEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   LAREARASGLTLPILMLTARGEEEDKLRGLDFGVDDYVVKPFSPREvvarvrallrrvG-  119
            L RE RA   T PILM+TA +++E+++R++D   DDYV KPF  R ++ RV ALLRR G 
Sbjct  64   LLREFRAQNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  120  VQEEIAVGDLRIDLRGHSASLS-GERLELSKLEFDLLSALAQHPGMAWPRERLLERVWGS  178
            +  E+ VG L + L  +   L  G  L L++ EF++L  L Q+ G +  +E +L R+WG 
Sbjct  123  LAKEFRVGRLTL-LPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  179  DFPGTERVVDVHITGLRKKLGDTSDTPRFIETVRGVGYRFRE  220
            DF G    V+ HI  LR KL +      +I T+RGVGYR+ E
Sbjct  182  DFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

249) ECL_04562 in NC_014121


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 71/175 (41%), Positives = 111/175 (64%), Gaps = 2/175 (1%)

Query  43   GEYSLVILDLGLPDKDGATLLSQWRRRGVDNPVLILTARDAIEDRINGLDSGADDYLVKP  102
              Y LVILD+ LP+ +G  LL + R +  D P+L++TA    E++I ++D+ ADDY+ KP
Sbjct  45   NTYQLVILDIMLPGMNGHELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKP  103

Query  103  FALAELQARVRALIRRYQGHSDNLLTDGDITLNLQTQQVLCQSLPVEVTPKEFALLTRLI  162
            F +  L  RV AL+RR  G   + +  G +TL  +  +VLC++  + +T KEF +L  L+
Sbjct  104  FKMRILLKRVEALLRR-SGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLV  162

Query  163  MRSGQTVHRETLQQDIYSWQDDPGSNTLEVHIHNLRRKLGKDRIKTVRGVGYRLE  217
               G+T+ +E +   I + + D +++T++ HI NLR KL  + IKT+RGVGYRLE
Sbjct  163  QNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

250) phoB in NC_017576


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 74/178 (42%), Positives = 125/178 (71%), Gaps = 7/178 (3%)

Query  45   DLILLDIMLPGSDGLSILEELKGKMSTADIPVIMATAKGTEFDKVKGLDMGSDDYLVKPF  104
            +L++LDIMLPG +G  +L E++++    D P++M TA + + ++++++D  +DDY+ KPF
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQ---NDTPILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  105  GMMEMISRIKAVLRRSQKSQRKQILQVGNLSLDIQNYTVKKDGKDISltlkefellgllM  164
             M  ++ R+ A+LRRS    +   ++VG L+L  +++ V  DG +++LT KEFE+L LL+
Sbjct  105  KMRILLKRVEALLRRSGALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLV  162

Query  165  KYPNRVFTRQELLNQVWGEYFVGETRTVDVHIGTLRTKLGDASHLIKTIRGVGYRLEE  222
            +   R +T++ +L+++WG  F G+  TV+ HI  LR+KL +  ++IKTIRGVGYRLEE
Sbjct  163  QNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

251) phoB in NC_015215


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 74/178 (42%), Positives = 125/178 (71%), Gaps = 7/178 (3%)

Query  45   DLILLDIMLPGSDGLSILEELKGKMSTADIPVIMATAKGTEFDKVKGLDMGSDDYLVKPF  104
            +L++LDIMLPG +G  +L E++++    D P++M TA + + ++++++D  +DDY+ KPF
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQ---NDTPILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  105  GMMEMISRIKAVLRRSQKSQRKQILQVGNLSLDIQNYTVKKDGKDISltlkefellgllM  164
             M  ++ R+ A+LRRS    +   ++VG L+L  +++ V  DG +++LT KEFE+L LL+
Sbjct  105  KMRILLKRVEALLRRSGALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLV  162

Query  165  KYPNRVFTRQELLNQVWGEYFVGETRTVDVHIGTLRTKLGDASHLIKTIRGVGYRLEE  222
            +   R +T++ +L+++WG  F G+  TV+ HI  LR+KL +  ++IKTIRGVGYRLEE
Sbjct  163  QNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

252) phoB in NC_013798


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 74/178 (42%), Positives = 125/178 (71%), Gaps = 7/178 (3%)

Query  45   DLILLDIMLPGSDGLSILEELKGKMSTADIPVIMATAKGTEFDKVKGLDMGSDDYLVKPF  104
            +L++LDIMLPG +G  +L E++++    D P++M TA + + ++++++D  +DDY+ KPF
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQ---NDTPILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  105  GMMEMISRIKAVLRRSQKSQRKQILQVGNLSLDIQNYTVKKDGKDISltlkefellgllM  164
             M  ++ R+ A+LRRS    +   ++VG L+L  +++ V  DG +++LT KEFE+L LL+
Sbjct  105  KMRILLKRVEALLRRSGALAKE--FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLV  162

Query  165  KYPNRVFTRQELLNQVWGEYFVGETRTVDVHIGTLRTKLGDASHLIKTIRGVGYRLEE  222
            +   R +T++ +L+++WG  F G+  TV+ HI  LR+KL +  ++IKTIRGVGYRLEE
Sbjct  163  QNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

253) Shel_18040 in NC_013165


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 75/185 (41%), Positives = 120/185 (65%), Gaps = 15/185 (8%)

Query  45   DLVLLDIMLPGEDGLSILSWIRNNADMAEVPVMMLTAKGTEFDKVLGLDSGADDYLAKPF  104
            +LV+LDIMLPG +G  +L  +R + D    P++M+TA + + +++ ++D+ ADDY++KPF
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQND---TPILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  105  GMMELVSRCKALLRRPAMAHPADGRDGAVTIGPISLSVRDHEAFAGTAELDLTLKEFDLL  164
             M  L+ R  ALLRR++ A + + R G +T+ P  + V     + + +EL LT KEF++L
Sbjct  105  KMRILLKRVEALLRRSG-ALAKEFRVGRLTLLPEDFRV-----LCDGTELPLTRKEFEIL  158

Query  165  RKLMENPGRAFTRSQLLKDVWDVSFVGETRTVDTHIQTLRRKLNDAYPGAGNAIETIRGV  224
              L++N GR++T+  +L  +W+  F G+  TV+THI+ LR KL +      N I TIRGV
Sbjct  159  LLLVQNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPE------NIIKTIRGV  212

Query  225  GYRFS  229
            GYR+ 
Sbjct  213  GYRLE  217

254) Moth_1478 in NC_007644


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  103 bits (374),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 144/225 (64%), Gaps = 8/225 (3%)

Query  14   DMRILVVEDETTLANTLARCLREEGYATDIAYDGEEGVA-FAETVVYDLIILDLMLPRLD  72
             +RIL+VED+  + NT+   L E  Y  D   DG+E+ + F E   Y+L+ILD+MLP ++
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENT-YQLVILDIMLPGMN  60

Query  73   GMEVIRRLRNERIETPVLMLTARDTVADKVRGLDAGADDYLTKPFalaellarvrallrr  132
            G E++R +R +  +TP+LM+TA     +++R++DA ADDY+TKPF +  LL RV ALLRR
Sbjct  61   GHELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  133  eSDNKSTVLQVGDLVMDTVSRQVRRGDREINLTNKEYALLEYLMRNPNRVLTRTQIAEHV  192
             S+  +  ++VG L +     +V  ++ E+ LT KE+ +L  L++N  R LT+  I  ++
Sbjct  120  -SGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  193  WDYDFSGMSNIVDVYIRYLRRKIDDNFEPKLLYTIRGSGYCLREP  237
            W+YDF G ++ V+  I+ LR K+ +N    ++ TIRG GY L E+
Sbjct  179  WGYDFDGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

255) NH44784_033551 in NC_021285


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 88/217 (41%), Positives = 137/217 (64%), Gaps = 2/217 (0%)

Query  1    MRILVVEDEPTlaaqlaealrlaGYTVDTAADGADAHYMGEVETYDVVVLDLGLPVMDGL  60
            +RIL+VED+  +   +   L  A Y VD+ +DG +AH     +TY++V+LD+ LP M+G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGH  62

Query  61   TVLKQWRAAGRGMPVLILTARSNWHEKVAGIDAGADDYLTKPFHMEEllarvrallrrYS  120
             +L++ RA   + P+L++TA S+ ++++ ++DA ADDY+TKPF M  LL RV ALLRR S
Sbjct  63   ELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR-S  120

Query  121  NHASAQWRCGPLMLDTRLARATVDGQPLNLTSHEFKVLAVLMQHAGEVVSRGDLIEHIYA  180
               + + R G L L     R   DG  L LT  EF +L +L+Q+ G  +++  ++ +I +
Sbjct  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  QDHDRDSNTIDVFIGRLRKKLPADTIETVRGLGYRLA  217
             D D D++T++  I  LR KLP + I T+RG+GYRL 
Sbjct  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

256) Desku_2044 in NC_015573


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 92/224 (42%), Positives = 143/224 (64%), Gaps = 8/224 (3%)

Query  1    MRILVVEDETTLANTLARCLREEGYATDIAYDGEEGIA-FAETVDYDLIILDLMLPRLDG  59
            +RIL+VED+  + NT+   L E  Y  D   DG+E+ + F E   Y+L+ILD+MLP ++G
Sbjct  3    IRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENT-YQLVILDIMLPGMNG  61

Query  60   MEVIRRLRNERIDTPVLMLTARDTVADKVRGLDAGADDYLTKPFalaellarvrallrre  119
             E++R +R +  DTP+LM+TA     +++R++DA ADDY+TKPF +  LL RV ALLRR 
Sbjct  62   HELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR-  119

Query  120  SANKSTVLQVGDLVMDTVSRRVRRGDREINLTNKEHALLEYLMRNPNRVLTRTQIAEHVW  179
            S+  +  ++VG L +     RV  ++ E+ LT KE  +L  L++N  R LT+  I  ++W
Sbjct  120  SGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  180  DYDFSGMSNIVDVYIRYLRRKIDDNFEPKLLYTVRGSGYCLREP  223
            +YDF G ++ V+  I+ LR K+ +N    ++ T+RG GY L E+
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

257) SFUL_3754 in NC_021177


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  102 bits (368),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 71/175 (41%), Positives = 109/175 (63%), Gaps = 10/175 (5%)

Query  68   VVLDVMLPDMDGLAVLGRIRREYSDVPVLFLTARDAVEDRIAGLTAGGDDYVTKPFSLEE  127
            V+LD+MLP+M+G  +L  +R + +D P+L +TA    E++I ++ A +DDYVTKPF +  
Sbjct  50   VILDIMLPGMNGHELLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRI  108

Query  128  VVARLRGLIRRSGTALAAERSQSTLTVGDLVLDEDSHEVSRGGNAIHLTATEFELLRFLM  187
            ++ R+ +L+RRSG ALA E     + VG L L  +   V  +G  + LT  EFE+L +L+
Sbjct  109  LLKRVEALLRRSG-ALAKE-----FRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLV  162

Query  188  RNPRRVLSKAQILDRVWNYDFGGQANVVELYISYLRKKIDAGRTPMIHTRRGAGY  242
            +N  R L+   IL R+W YDF+G+++ V+  I  LR K+      +I T RG GY
Sbjct  163  QNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN---IIKTIRGVGY  214

258) Psed_5946 in NC_015312


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 83/206 (41%), Positives = 134/206 (66%), Gaps = 11/206 (5%)

Query  50   YLGAAGHDVELALDGPGALRAARTTPPDVVVLDLMLPGLGGLEVCRALRADGDRPPIIML  109
            +L+ A  +V+   DG  A         ++V+LD+MLPG+ G E+ R +RA+ D  PI+M+
Sbjct  21   FLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHELLREFRAQND-TPILMM  79

Query  110  TalgeeddrllglelgaddYVTKPFSPRELVLRVGSILRRTAAPATAPELVDGGLRVDPA  169
            TAL+++++++ +++  ADDYVTKPF  R L+ RV ++LRR++A A   E+  G L + P 
Sbjct  80   TALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGALAK--EFRVGRLTLLPE  137

Query  170  A-RVASLDGQPLALTTREFDLLAFLLAHPGQAFTREELLSRVWGWEF-GDRSTVTVHVRR  227
              RV   DG  L+LT +EF++L +L+ + G+++T+E +LSR+WG +F GD STV  H++ 
Sbjct  138  DFRVLC-DGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKN  196

Query  228  LREKVEADPTAPRRIATIWGTGYRYD  253
            LR K+  +      I TI+G GYR +
Sbjct  197  LRAKLPENI-----IKTIRGVGYRLE  217

259) Ethha_1035 in NC_014828


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 99.4 bits (358),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 90/221 (41%), Positives = 142/221 (65%), Gaps = 11/221 (4%)

Query  3    RLLVVEDDPALVTGLRYSMEKDGFQVRTAGSVREGWQAFSQDRPDLVVLDVGLPDGTGFD  62
            R+L+VEDD  +   +R  +    ++V +     E+   F ++  +LV+LD+ LP+  G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRQIRVENGTPILFLTACDEETQVVMGLDMGGDDYITKPFrlrellsrvrallrrSADK  122
            L R++R +N+TPIL +TA  ++ + + ++D  +DDY+TKPF++R LL RV ALLRRS+  
Sbjct  64   LLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGAL  123

Query  123  PVKTLVSGAVTLDTEEAHV-CRNGEEISLTPAEYRLLRLLMQNEGRTLTREQLLDTLWDS  181
            + K +  G +TL  E+ +V C +G E++LT  E+ +L LL+QN GRTLT+E +L  +W  
Sbjct  124  A-KEFRVGRLTLLPEDFRVLC-DGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW--  179

Query  182  GGDF-VDENTLSVYIRRLRAKIEDNPSSPVHIHTVRGVGYR  221
            G DF  D +T+   I+ LRAK+ +N      I T+RGVGYR
Sbjct  180  GYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYR  215

260) LMKG_02720 in NC_017546


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score =   99 bits (360),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 76/182 (42%), Positives = 113/182 (63%), Gaps = 13/182 (7%)

Query  11   LVILDIMMPEMNGLEVCRLMRDNGILTPILMLSAKAEDNDKIMGLLTGADDYMVKPFNPL  70
            LVILDIM+P MNG E+ R  R +   TPILM++A ++D+++I ++ + ADDY+ KPF+  
Sbjct  49   LVILDIMLPGMNGHELLREFRAQND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMR  107

Query  71   ELSVRVKAILRRMQQMSQAEPVSQDKVIIGPIVVDRGLHVVTVGGKELHLTTSEFDILFL  130
             L  RV A+LRR   +++   V++  ++   + V         +G EL LT  EF+IL+L
Sbjct  108  ILLKRVEALLRRSGALAKEFRVGRLTLLPEDFRV-------LCDGTELPLTRKEFEILLL  160

Query  131  LASEPGRVFSSEYIFEKIWQEKALGASKTVMVHISNLRDKLREAMGGENVIKTIWGVGYK  190
            L  + GR ++ E I+ +IW     G + TV  HI NLR KL      EN+IKTI+GVGY+
Sbjct  161  LVQNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKL-----PENIIKTIRGVGYR  215

Query  191  IE  192
            +E
Sbjct  216  LE  217

261) COB47_1067 in NC_014392


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 95.2 bits (342),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 152/227 (67%), Gaps = 14/227 (6%)

Query  4    ILIVDDEQHILELLKFNLRKEGYNTFEADSGVQALEILKNNKVDLVILDIMMSDKDGYEV  63
            IL+V+D++HI + ++  L    Y+      G +A   + +N  +LVILDIM+++ +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   LKEIRFNRDTKNLPVILLSAKSEEIDKILGLELGADDYITKPFSvkelvvrvkallrrve  123
            L+E+R + DT   P+++++A S++ ++I +++  ADDY+TKPF ++ L+ RV ALLRR  
Sbjct  65   LREFRAQNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  124  SLKPEVEDKV-KFGDVEVDFSKRTVKKNNQDVslsfkefellkllIENKGRVLDRDFILQ  182
            +L  E   +V ++  +  DF    V  +  +++L+ KEFE+L LL++NKGR L +++IL 
Sbjct  122  ALAKEF--RVGRLTLLPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  RVWGYEFDGDTRTVDVHIRFLRRKLEDDEKNPRYIETVRGVGYRFNE  229
            R+WGY+FDGD  TV+ HI+ LR KL ++      I T+RGVGYR++E
Sbjct  177  RIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

262) Ent638_3617 in NC_009436


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 93.6 bits (336),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 72/175 (42%), Positives = 111/175 (64%), Gaps = 2/175 (1%)

Query  43   GEYSLVILDLGLPDKDGATLLSQWRRRGVDNPVLILTARDAIEDRIHGLDSGADDYLVKP  102
              Y LVILD+ LP+ +G  LL + R +  D P+L++TA    E++I+++D+ ADDY+ KP
Sbjct  45   NTYQLVILDIMLPGMNGHELLREFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKP  103

Query  103  FalaelqararalirrYQGHSDNQVVDGDLTLNLQTQQVLCDSHPVEVTPKEFALLTRLI  162
            F +  L  R  AL+RR  G   ++   G LTL  +  +VLCD+  + +T KEF +L  L+
Sbjct  104  FKMRILLKRVEALLRR-SGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLV  162

Query  163  MRSGQTVHRETLQQDIYSWQDDPGSNTLEVHIHNLRRKLGKDRIKTVRGVGYRLE  217
               G+T+ +E +   I + + D +++T++ HI NLR KL  + IKT+RGVGYRLE
Sbjct  163  QNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

263) Calla_0857 in NC_015949


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 151/227 (67%), Gaps = 14/227 (6%)

Query  4    ILIVDDEQHILELLKFNLRKEGYNTFEADSGVLALEILKHNKVDLVILDIMMSDKDGYEV  63
            IL+V+D++HI + ++  L    Y+      G  A   + +N  +LVILDIM+++ +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   LKEIRFNRDTKNLPVILLSAKSEEIDKILGLELGADDYITKPFSvkelvvrvkallrrve  123
            L+E+R + DT   P+++++A S++ ++I +++  ADDY+TKPF ++ L+ RV ALLRR  
Sbjct  65   LREFRAQNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  124  SLKPEVEDKV-KFGDVEVDFSKRTVKKNNQDVslsfkefellkllIENKGRVLDRDFILQ  182
            +L  E   +V ++  +  DF    V  +  +++L+ KEFE+L LL++NKGR L +++IL 
Sbjct  122  ALAKEF--RVGRLTLLPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  RVWGYEFDGDTRTVDVHIRFLRRKLEDDEKNPRYIETVRGVGYRFNE  229
            R+WGY+FDGD  TV+ HI+ LR KL ++      I T+RGVGYR++E
Sbjct  177  RIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

264) Calkr_1472 in NC_014721


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 92.0 bits (330),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 151/227 (67%), Gaps = 14/227 (6%)

Query  4    ILIVDDEQHILELLKFNLRKEGYNTFEADSGVLALEILKHNKVDLVILDIMMSDKDGYEV  63
            IL+V+D++HI + ++  L    Y+      G  A   + +N  +LVILDIM+++ +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   LKEIRFNRDTKNLPVILLSAKSEEIDKILGLELGADDYITKPFSvkelvvrvkallrrve  123
            L+E+R + DT   P+++++A S++ ++I +++  ADDY+TKPF ++ L+ RV ALLRR  
Sbjct  65   LREFRAQNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSG  121

Query  124  SLKPEVEDKV-KFGDVEVDFSKRTVKKNNQDVslsfkefellkllIENKGRVLDRDFILQ  182
            +L  E   +V ++  +  DF    V  +  +++L+ KEFE+L LL++NKGR L +++IL 
Sbjct  122  ALAKEF--RVGRLTLLPEDFR---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  RVWGYEFDGDTRTVDVHIRFLRRKLEDDEKNPRYIETVRGVGYRFNE  229
            R+WGY+FDGD  TV+ HI+ LR KL ++      I T+RGVGYR++E
Sbjct  177  RIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

265) FMG_0591 in NC_010376


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 91.5 bits (328),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 72/169 (43%), Positives = 113/169 (67%), Gaps = 7/169 (4%)

Query  70   PGKSGLEILKEIRNNEKTKNIPVMMLTAKTTEYDKIVGLDSGADDYMIKPFSIMEllarv  129
            PG +G E+L+E+R ++ T   P++M+TA + + ++I ++D+ ADDY+ KPF +  LL RV
Sbjct  57   PGMNGHELLREFRAQNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRV  113

Query  130  rallrrsslsKTKSKIIYKNIELDYDKRTVSVDGENVELTYKEFELLYYLLSNVGKVLTR  189
             ALLRRS+      ++    + L  +   V  DG ++ LT KEFE+L  L+ N G+ LT+
Sbjct  114  EALLRRSGALAKEFRV--GRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTH  171

Query  190  ENIMTKIWGFDFEGESRTVDVHIATLRQKLKNASSIIKTIRNLGYKAGE  238
            E I+++IWG+DF+G++ TV+ HI  LR KL  + +IIKTIR +GY+  E
Sbjct  172  EIILSRIWGYDFDGDGSTVHTHIKNLRAKL--PENIIKTIRGVGYRLEE  218

266) CYB_0249 in NC_007776


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 91.2 bits (327),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 96/229 (42%), Positives = 148/229 (65%), Gaps = 16/229 (6%)

Query  3    RILIIEDDPSILDILRINLELAGYEVVKATDGVRGQALALQVlpdliildlmlpQVDGLT  62
            RIL++EDD  I + +R  L  A YEV   TDG  +++   +   +L+ILD+MLP ++G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNG--  61

Query  63   VCQRLRREERT-SEIPILMLTALGQTQDKIEGFNAGADDYLTKPFEVQEllvrvrallrr  121
              + L RE R+ ++ PILM+TAL++ +++I +F+A ADDY+TKPF ++ LL RV ALLRR
Sbjct  62   --HELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR  119

Query  122  SDRIPQAAKHGEILTYGPLTLVPERFEALWFGKTIKLTHLEFDLLHCLMQRHGQTVSPSE  181
            S+ +++  + G       LTL+PE F  L  G  + LT+ EF++L  L+Q  G+T++   
Sbjct  120  SGALAKEFRVG------RLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  182  ILQEVWGYEPDDDIETIRVHIRHLRTKLEPDPRHPQYIKTVYGAGYCLE  230
            IL  +WGY+ D+D  T++ HI++LR+KL  +      IKT+ G GY LE
Sbjct  174  ILSRIWGYDFDGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLE  217

267) phoB in NC_020555


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 85.7 bits (306),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 71/176 (41%), Positives = 113/176 (65%), Gaps = 7/176 (3%)

Query  47   VVLDVMLPQEDGLSVLHKMRQNHKSKNIPVIMLTALGSEFDKIKGLDSGADDYLTKPFSA  106
            V+LD+MLP  +G  +L+  R ++   + P++M+TAL+ + ++I+++D+ ADDY+TKPF  
Sbjct  50   VILDIMLPGMNGHELLREFRAQN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKM  106

Query  107  LELIARIKALLRRSHTQNDCEMSYGDLKYSKTIHSVSIGGESlhltlkefellgllMSST  166
              L+ R+ ALLRRS +    E   G L        V  +G  L LT KEFE+L LL+ + 
Sbjct  107  RILLKRVEALLRRSGALAK-EFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNK  165

Query  167  NRVFSREELLEIIWGYNISG-TRTIDIHINTLRSKLGKYGKHIKTIRGVGYQFNTN  221
             R +++E +L  IWGY++ G   T++ HI+ LR+KL    + IKTIRGVGY+++ +
Sbjct  166  GRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLP--ENIIKTIRGVGYRLEES  219

268) HCN_0446 in NC_017761


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 85.7 bits (306),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 71/176 (41%), Positives = 113/176 (65%), Gaps = 7/176 (3%)

Query  47   VVLDVMLPQEDGLSVLHKMRQNHKSKNIPVIMLTALGSEFDKIKGLDGGADDYLTKPFSA  106
            V+LD+MLP  +G  +L+  R ++   + P++M+TAL+ + ++I+++D+ ADDY+TKPF  
Sbjct  50   VILDIMLPGMNGHELLREFRAQN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKM  106

Query  107  LELIARIKALLRRSHTQNDCEMSYGDLKYSKTIHSVSIGGESlhltlkefellgllMSST  166
              L+ R+ ALLRRS +    E   G L        V  +G  L LT KEFE+L LL+ + 
Sbjct  107  RILLKRVEALLRRSGALAK-EFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNK  165

Query  167  NRVFSREELLEIIWGYNISG-TRTIDIHINTLRSKLGKYGKHIKTIRGVGYQFNTN  221
             R +++E +L  IWGY++ G   T++ HI+ LR+KL    + IKTIRGVGY+++ +
Sbjct  166  GRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLP--ENIIKTIRGVGYRLEES  219

269) Ocepr_0547 in NC_014761


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 84.2 bits (300),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 146/222 (66%), Gaps = 9/222 (4%)

Query  3    KILIVDDDPAIREILRAYLSHEGYELSEaadgvsalal--apaadlvvldlmlPEMDGLE  60
            +IL+V+DD  I + +RA+L++  YE+   +DG  A +     + +LV+LD+MLP M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   VARHLRRDFPELPILMLTArgeeeervrgfeegADDYVTKPFSPRElvarvrallrrSGI  120
            + R++R +  + PILM+TA +++E+++R+F+  ADDYVTKPF  R L+ RV ALLRRSG 
Sbjct  64   LLREFRAQ-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGA  122

Query  121  HDR-LVYGDLEIVPGSREVYLAGRPVELSKLEFDLLLTLAQHPGMVFSRERLLERVWGSD  179
              + +  G L ++P    V   G  + L++ EF++LL L Q+ G  +++E +L R+WG D
Sbjct  123  LAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  180  FFGVERVVDVHVASLRKRLGDEPDRPRFIETVRGVGYRFKET  221
            F G    V+ H+ +LR +L ++     +I T+RGVGYR+ E+
Sbjct  183  FDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

270) Ththe16_0241 in NC_017272


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 80.0 bits (284),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 74/179 (42%), Positives = 109/179 (61%), Gaps = 8/179 (4%)

Query  45   ELVVLDWMLPDEPGVRLLDRMRQGPYESLPVLMLTARAGVRDRVEGLSRGADDYLVKPFA  104
            +LV+LD MLP+  G  LL   R    +  P+LM+TA ++  +++ ++   ADDY+ KPF 
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQ--NDTPILMMTALSDDENQIRAFDAEADDYVTKPFK  105

Query  105  VeellarleallrraGK-RKVLRRGPLLLDLERMEARLEGNPLPLTRREFALLAYLAERP  163
            +  LL R+EALLRR+G   K +R G L L  E      +G  LPLTR+EF +L  L +  
Sbjct  106  MRILLKRVEALLRRSGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNK  165

Query  164  GRVCTREELLEAVWGPDYLGTPRTVDQHVLQLREKLGEDPKAPRFLETVRGVGYRFREG  222
            GR  T+E +L  +WG D+ G   TV+ H+ +LR KL E+     ++ T+RGVGYR+ E+
Sbjct  166  GRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

271) phoB in NC_005835


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 79.4 bits (282),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 74/178 (42%), Positives = 108/178 (61%), Gaps = 8/178 (4%)

Query  45   ELVVLDWMLPDEPGVRLLDRMRQGPYESLPVLMLTARAGVRDRVEGLSRGADDYLVKPFA  104
            +LV+LD MLP+  G  LL   R    +  P+LM+TA ++  +++ ++   ADDY+ KPF 
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQ--NDTPILMMTALSDDENQIRAFDAEADDYVTKPFK  105

Query  105  VeellarleallrraGK-RKVLRRGPLLLDLERMEARLEGNPLPLTRREFALLAYLAERP  163
            +  LL R+EALLRR+G   K +R G L L  E      +G  LPLTR+EF +L  L +  
Sbjct  106  MRILLKRVEALLRRSGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNK  165

Query  164  GRVCTREELLEAVWGPDYLGTPRTVDQHVLQLREKLGEDPKAPRFLETVRGVGYRFRE  221
            GR  T+E +L  +WG D+ G   TV+ H+ +LR KL E+     ++ T+RGVGYR+ E
Sbjct  166  GRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

272) TTHA0145 in NC_006461


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 79.4 bits (282),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 74/178 (42%), Positives = 108/178 (61%), Gaps = 8/178 (4%)

Query  45   ELVVLDWMLPDEPGVRLLDRMRQGPYESLPVLMLTARAGVRDRVEGLSRGADDYLVKPFA  104
            +LV+LD MLP+  G  LL   R    +  P+LM+TA ++  +++ ++   ADDY+ KPF 
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQ--NDTPILMMTALSDDENQIRAFDAEADDYVTKPFK  105

Query  105  VeellarleallrraGK-RKVLRRGPLLLDLERMEARLEGNPLPLTRREFALLAYLAERP  163
            +  LL R+EALLRR+G   K +R G L L  E      +G  LPLTR+EF +L  L +  
Sbjct  106  MRILLKRVEALLRRSGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNK  165

Query  164  GRVCTREELLEAVWGPDYLGTPRTVDQHVLQLREKLGEDPKAPRFLETVRGVGYRFRE  221
            GR  T+E +L  +WG D+ G   TV+ H+ +LR KL E+     ++ T+RGVGYR+ E
Sbjct  166  GRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

273) TtJL18_1857 in NC_017587


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 79.2 bits (281),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 74/178 (42%), Positives = 108/178 (61%), Gaps = 8/178 (4%)

Query  45   ELVVLDWMLPDEPGVRLLDRMRQGPYESLPVLMLTARAGVRDRVEGLSRGADDYLVKPFA  104
            +LV+LD MLP+  G  LL   R    +  P+LM+TA ++  +++ ++   ADDY+ KPF 
Sbjct  48   QLVILDIMLPGMNGHELLREFRAQ--NDTPILMMTALSDDENQIRAFDAEADDYVTKPFK  105

Query  105  VeellarleallrraGK-RKVLRRGPLLLDLERMEARLEGNPLPLTRREFALLAYLAERP  163
            +  LL R+EALLRR+G   K +R G L L  E      +G  LPLTR+EF +L  L +  
Sbjct  106  MRILLKRVEALLRRSGALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNK  165

Query  164  GRVCTREELLEAVWGPDYLGTPRTVDQHVLQLREKLGEDPKAPRFLETVRGVGYRFRE  221
            GR  T+E +L  +WG D+ G   TV+ H+ +LR KL E+     ++ T+RGVGYR+ E
Sbjct  166  GRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

274) O3I_005825 in NC_018681


> NC_004668_R1|18|G18|29376802|NP_815956.1|Enterococcus_faecalis_V583|-|14061..14723|vanRB|EF2299|DNA-binding 
response regulator 
VanRB
Length=220

 Score = 75.5 bits (267),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 65/159 (41%), Positives = 101/159 (64%), Gaps = 7/159 (4%)

Query  65   RQVRASGADIAVLMLTARTDEVDFVVGLDAGADDYVGKPFrlaellarvrallrrSGIGD  124
            R+ RA   D ++LM+TA +D+ + + ++DA ADDYV KPF++  LL RV ALLRRSG   
Sbjct  66   REFRAQN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRSGALA  124

Query  125  DTVEVGGIRLEPAARRVLVNGAEIGLANKEYELLKVLIDRAGQVVPRETILREVWGDAEL  184
                VG + L P   RVL +G+E+ L+ KE+E+L +L++  G+ + +E IL  +WG    
Sbjct  125  KEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFD  184

Query  185  RGSKTLDMHMSWLRRKIGDEGPMAERRIVTVRGVGFRLN  223
             ++ T++ H+  LR K      ++E  I T+RGVG+RL+
Sbjct  185  GDGSTVHTHIKNLRAK------LPENIIKTIRGVGYRLE  217