Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
LuxR family transcriptional regulator |
NC_011353 (Escherichia coli EC4115) |
3e-73 |
100 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
3e-73 |
100 |
|
transcriptional regulator |
NC_002695 (Escherichia coli Sakai) |
3e-73 |
100 |
|
hypothetical protein |
NC_013008 (Escherichia coli TW14359) |
3e-73 |
100 |
|
putative transcriptional regulator |
NC_017906 (Escherichia coli Xuzhou21) |
3e-73 |
100 |
|
transcriptional regulator |
NC_017626 (Escherichia coli 042) |
3e-72 |
98 |
|
putative response regulator |
NC_011751 (Escherichia coli UMN026) |
3e-72 |
98 |
|
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
NC_018650 (Escherichia coli 2009EL-2050) |
4e-72 |
97 |
|
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
NC_018661 (Escherichia coli 2009EL-2071) |
4e-72 |
97 |
|
putative type III secretion system regulator |
NC_018658 (Escherichia coli 2011C-3493) |
4e-72 |
97 |
|
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
NC_011748 (Escherichia coli 55989) |
4e-72 |
97 |
|
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
NC_020163 (Escherichia coli APEC O78) |
4e-72 |
97 |
|
hypothetical protein |
NC_011741 (Escherichia coli IAI1) |
4e-72 |
97 |
|
putative type III secretion system regulator |
NC_011415 (Escherichia coli SE11) |
4e-72 |
97 |
|
LuxR family transcriptional regulator |
NC_010468 (Escherichia coli ATCC 8739) |
6e-71 |
96 |
|
LuxR family transcriptional regulator |
NC_009800 (Escherichia coli HS) |
6e-71 |
96 |
|
transcriptional regulator |
NC_017633 (Escherichia coli ETEC H10407) |
1e-70 |
96 |
|
hypothetical protein |
NC_017663 (Escherichia coli P12b) |
1e-70 |
96 |
|
transcriptional regulator |
NC_013361 (Escherichia coli 11368) |
5e-61 |
98 |
|
regulatory protein LuxR |
NC_016902 (Escherichia coli KO11FL) |
5e-61 |
98 |
|
putative transcriptional regulator |
NC_017660 (Escherichia coli KO11FL) |
5e-61 |
98 |
|
LuxR family transcriptional regulator |
NC_022364 (Escherichia coli LY180) |
5e-61 |
98 |
|
transcriptional regulator |
NC_017635 (Escherichia coli W) |
5e-61 |
98 |
|
putative transcriptional regulator |
NC_017664 (Escherichia coli W) |
5e-61 |
98 |
|
transcriptional regulator EtrA |
NC_013353 (Escherichia coli 12009) |
4e-60 |
97 |
|
transcriptional regulator EtrA |
NC_013364 (Escherichia coli 11128) |
7e-60 |
98 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_002695_P1' AND ph.id_pai_orf='18' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc