Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
Type III secretion component protein SctD |
NC_005126 (Photorhabdus luminescens TTO1) |
1e-172 |
91 |
|
type iii secretion component protein sctd |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
5e-147 |
84 |
|
type III export protein PscD |
NC_020912 (Pseudomonas aeruginosa B136-33) |
1e-101 |
49 |
|
type III export protein |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
1e-101 |
49 |
|
type III export protein PscD |
NC_002516 (Pseudomonas aeruginosa PAO1) |
2e-101 |
49 |
|
type III export protein PscD |
NC_017548 (Pseudomonas aeruginosa M18) |
4e-101 |
48 |
|
type III export protein PscD |
NC_008463 (Pseudomonas aeruginosa UCBPP-PA14) |
7e-101 |
49 |
|
type III export protein PscD |
NC_018080 (Pseudomonas aeruginosa DK2) |
9e-101 |
49 |
|
type III export protein PscD |
NC_011770 (Pseudomonas aeruginosa LESB58) |
1e-100 |
49 |
|
AscD protein |
NC_009350 (Aeromonas salmonicida A449) |
5e-95 |
50 |
|
Yop proteins translocation protein D |
NC_015475 (Yersinia enterocolitica 105.5R(r)) |
7e-83 |
45 |
|
putative type III secretion protein |
NC_008791 (Yersinia enterocolitica 8081) |
7e-83 |
45 |
|
putative type III secretion protein YscD |
NC_005813 (Yersinia pestis 91001) |
4e-82 |
45 |
|
type III secretion apparatus protein YscD |
NC_010157 (Yersinia pestis Angola) |
4e-82 |
45 |
|
type III secretion protein |
NC_008122 (Yersinia pestis Antiqua) |
4e-82 |
45 |
|
virulence protein |
NC_003131 (Yersinia pestis CO92) |
4e-82 |
45 |
|
type III secretion protein |
NC_009377 (Yersinia pestis Pestoides F) |
4e-82 |
45 |
|
yscD; type III secretion protein |
NC_006153 (Yersinia pseudotuberculosis IP 32953) |
4e-82 |
45 |
|
YscD/HrpQ family type III secretion apparatus protein |
NC_010635 (Yersinia pseudotuberculosis PB1/+) |
4e-82 |
45 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AY144116' AND ph.id_pai_orf='18' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc