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Homologs of unnamed gene of AF410775

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SACOL0891
( YP_185762.1 )

transcriptional regulator

NC_002951
(Staphylococcus aureus COL)

2e-26

100

2) M013TW_0812
( YP_005297254.1 )

Cro-like repressor, superantigen-encodingpathogenicity islands SaPI

NC_016928
(Staphylococcus aureus M013)

2e-26

100

3) SA40_0760
( YP_008587405.1 )

putative transcriptional regulator

NC_022443
(Staphylococcus aureus SA40)

2e-26

100

4) SA957_0775
( YP_008584873.1 )

putative transcriptional regulator

NC_022442
(Staphylococcus aureus SA957)

2e-26

100

5) scrB
( YP_005752140.1 )

Transcriptional regulator, putative

NC_017347
(Staphylococcus aureus T0131)

2e-26

100

6) SAUSA300_0804
( YP_493504.1 )

putative transcriptional regulator

NC_007793
(Staphylococcus aureus FPR3757)

2e-25

7) USA300HOU_0855
( YP_001574755.1 )

bacteriophage repressor

NC_010079
(Staphylococcus aureus TCH1516)

2e-25

8) pi356
( YP_005868362.1 )

Cro-like repressor

NC_017486
(Lactococcus lactis CV56)

6e-15

9) pi356
( NP_267585.1 )

Cro-like repressor

NC_002662
(Lactococcus lactis IL1403)

6e-15

10) cro
( YP_006993552.1 )

helix-turn-helix family protein

NC_019425
(Carnobacterium maltaromaticum LMA28)

1e-13

11) MGAS2096_Spy0556
( YP_600152.1 )

Cro family transcriptional regulator

NC_008023
(Streptococcus pyogenes MGAS2096)

6e-12

12) SPy_0658
( NP_268900.1 )

Cro-like protein

NC_002737
(Streptococcus pyogenes SF370)

6e-12

13) SAK_0611
( YP_329243.1 )

prophage LambdaSa03, Cro/CI family transcriptional regulator

NC_007432
(Streptococcus agalactiae A909)

2e-08

14) lin2421
( NP_471751.1 )

hypothetical protein

NC_003212
(Listeria innocua Clip11262)

0.009

15) M641_00150
( YP_008297603.1 )

hypothetical protein

NC_021838
(Listeria monocytogenes R2-502)

0.011

• Sequence Alignments

1) SACOL0891 in NC_002951


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 66/66 (100%), Positives = 66/66 (100%), Gaps = 0/66 (0%)

Query  22  MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  81
           MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  60

Query  82  GGELNV  87
           GGELNV
Sbjct  61  GGELNV  66

2) M013TW_0812 in NC_016928


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 66/66 (100%), Positives = 66/66 (100%), Gaps = 0/66 (0%)

Query  22  MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  81
           MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  60

Query  82  GGELNV  87
           GGELNV
Sbjct  61  GGELNV  66

3) SA40_0760 in NC_022443


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 66/66 (100%), Positives = 66/66 (100%), Gaps = 0/66 (0%)

Query  22  MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  81
           MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  60

Query  82  GGELNV  87
           GGELNV
Sbjct  61  GGELNV  66

4) SA957_0775 in NC_022442


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 66/66 (100%), Positives = 66/66 (100%), Gaps = 0/66 (0%)

Query  22  MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  81
           MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  60

Query  82  GGELNV  87
           GGELNV
Sbjct  61  GGELNV  66

5) scrB in NC_017347


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 66/66 (100%), Positives = 66/66 (100%), Gaps = 0/66 (0%)

Query  22  MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  81
           MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  60

Query  82  GGELNV  87
           GGELNV
Sbjct  61  GGELNV  66

6) SAUSA300_0804 in NC_007793


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 65/66 (99%), Positives = 65/66 (99%), Gaps = 0/66 (0%)

Query  15  MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPGKERKNILK  74
           MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVP KERKNILK
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  60

Query  75  GGELNV  80
           GGELNV
Sbjct  61  GGELNV  66

7) USA300HOU_0855 in NC_010079


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score =  108 bits (392),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 65/66 (99%), Positives = 65/66 (99%), Gaps = 0/66 (0%)

Query  22  MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPGKERKNILK  81
           MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVP KERKNILK
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  60

Query  82  GGELNV  87
           GGELNV
Sbjct  61  GGELNV  66

8) pi356 in NC_017486


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score = 73.6 bits (260),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 37/56 (67%), Positives = 49/56 (88%), Gaps = 0/56 (0%)

Query  22  VAKRMGWKTRAAYAKRENGIVSIGANELIKLASIFGYDKEDLGIFFKANVPEKERN  77
           +A +MGWKTR++YAKRENGIV IGANE+IK+A I+GY+ ++L+IFF  NVP KER+
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERK  56

9) pi356 in NC_002662


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score = 73.6 bits (260),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 37/56 (67%), Positives = 49/56 (88%), Gaps = 0/56 (0%)

Query  24  VAKRMGWKTRAAYAKRENGIVSIGANELIKLASIFGYDKEDLGIFFKANVPEKERN  79
           +A +MGWKTR++YAKRENGIV IGANE+IK+A I+GY+ ++L+IFF  NVP KER+
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERK  56

10) cro in NC_019425


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score = 69.2 bits (243),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 37/59 (63%), Positives = 49/59 (84%), Gaps = 0/59 (0%)

Query  22  MARLAGWETRTPYAKRENGIVSIGADELAKFAEILGYSSEELGIFFTKNVPEKEQLQLV  80
           MA+  GW TRTPYAKRENGIV IGA+E+ K A ILGY +++L+IFFT+NVP KE+ +++
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNIL  59

11) SPy_0658 in NC_002737


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score = 63.7 bits (222),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 32/55 (59%), Positives = 44/55 (80%), Gaps = 0/55 (0%)

Query  22  VAQSMGWKTRTPYAKRENGIVSIGADELAKITLIFGLPIEKIAIFFDKDVPVMER  76
           +A+ MGWKTRTPYAKRENGIV IGA+E+ K++ I+G   +++ IFF ++VP  ER
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKER  55

12) MGAS2096_Spy0556 in NC_008023


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score = 63.7 bits (222),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 32/55 (59%), Positives = 44/55 (80%), Gaps = 0/55 (0%)

Query  22  VAQSMGWKTRTPYAKRENGIVSIGADELAKITLIFGLPIEKIAIFFDKDVPVMER  76
           +A+ MGWKTRTPYAKRENGIV IGA+E+ K++ I+G   +++ IFF ++VP  ER
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKER  55

13) SAK_0611 in NC_007432


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score = 52.1 bits (178),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 27/51 (53%), Positives = 39/51 (77%), Gaps = 0/51 (0%)

Query  22  MASQLGWSDRARYAKRENGIVSFDADELARVAEILGISKDNIGIFFTYNVH  72
           MA ++GW  R+ YAKRENGIV ++A+E+ ++A ILG   +N++IFFT NV 
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVP  51

14) lin2421 in NC_003212


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score = 33.2 bits (106),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 37/62 (60%), Gaps = 3/62 (4%)

Query  24  MAIKLGFKNASTYLKYETGEYKIKAEMLPLLAKILKCNISN---FFTKNVAKTETKDFAK  80
           MA K+G K  + Y K E G   I A+ +  +AKIL  + +N   FFT+NV++ E K++ K
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  60

Query  81  IG  82
            G
Sbjct  61  GG  62

15) M641_00150 in NC_021838


> AF410775|18|G18|15625524|AAL04142.1|Staphylococcus_aureus_subsp._aureus_COL|-|11229..11429|-|-|unknown
Length=66

 Score = 33.0 bits (105),  Expect = 0.011, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 36/62 (59%), Gaps = 3/62 (4%)

Query  24  MAIKLGFKNASTYLKYETGEYKIKAEMLPLLAKILKCNIAN---FFTKNVAKTETKDFAK  80
           MA K+G K  + Y K E G   I A+ +  +AKIL  +  N   FFT+NV++ E K++ K
Sbjct  1   MAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILK  60

Query  81  IG  82
            G
Sbjct  61  GG  62