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Homologs of HP0538 gene of AB120418

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPIN_04195
( YP_005782150.1 )

cag pathogenicity island protein (cag17)

NC_017372
(Helicobacter pylori India7)

1e-123

2) HPKB_0805
( YP_005762313.1 )

cag pathogenicity island protein N

NC_017354
(Helicobacter pylori 52)

8e-123

3) HPLT_02655
( YP_005772674.1 )

cag pathogenicity island protein (cag17)

NC_017362
(Helicobacter pylori Lithuania75)

2e-122

4) cagN
( YP_002301179.1 )

cag pathogenicity island protein N

NC_011498
(Helicobacter pylori P12)

1e-120

5) HPAG1_0513
( YP_627254.1 )

cag pathogenicity island protein N

NC_008086
(Helicobacter pylori HPAG1)

1e-116

6) HP0538
( NP_207334.1 )

cag pathogenicity island protein (cag17)

NC_000915
(Helicobacter pylori 26695)

2e-116

7) C694_02775
( YP_006934461.1 )

cag pathogenicity island protein (cag17)

NC_018939
(Helicobacter pylori 26695)

2e-116

8) C695_02775
( YP_006893026.1 )

cag pathogenicity island protein (cag17)

NC_018937
(Helicobacter pylori Rif1)

2e-116

9) C730_02775
( YP_006936067.1 )

cag pathogenicity island protein (cag17)

NC_018938
(Helicobacter pylori Rif2)

2e-116

10) HPB14_04120
( YP_006219537.1 )

cag pathogenicity island protein CagN

NC_017733
(Helicobacter pylori HUP-B14)

3e-116

11) HMPREF0462_0879
( YP_005785446.1 )

cag pathogenicity island protein

NC_017375
(Helicobacter pylori 83)

9e-116

12) HPSJM_02605
( YP_003928434.1 )

cag island protein

NC_014560
(Helicobacter pylori SJM180)

8e-115

13) HPSNT_02770
( YP_005786694.1 )

cag pathogenicity island protein (cagN, cag17)

NC_017376
(Helicobacter pylori Santal49)

1e-114

14) cagN
( NP_223204.1 )

cag island protein

NC_000921
(Helicobacter pylori J99)

1e-114

15) HPELS_04020
( YP_005424924.1 )

cag pathogenicity island protein (cagN, cag17)

NC_017063
(Helicobacter pylori ELS37)

2e-114

16) HPGAM_02740
( YP_005780271.1 )

cag pathogenicity island protein (cagN, cag17)

NC_017371
(Helicobacter pylori Gambia94/24)

3e-114

17) cagN
( YP_005775738.1 )

cag pathogenicity island protein

NC_017366
(Helicobacter pylori F32)

7e-114

18) cag17
( YP_005783508.1 )

cag pathogenicity island protein N

NC_017374
(Helicobacter pylori 2017)

6e-113

19) cag17
( YP_005791352.1 )

cag pathogenicity island protein

NC_017381
(Helicobacter pylori 2018)

6e-113

20) hp908_0540
( YP_005765043.1 )

cag island protein

NC_017357
(Helicobacter pylori 908)

6e-113

21) K750_04085
( YP_007982173.1 )

sodium:calcium antiporter

NC_021217
(Helicobacter pylori UM037)

2e-112

22) cagN
( YP_005774533.1 )

cag pathogenicity island protein

NC_017365
(Helicobacter pylori F30)

3e-111

23) K748_08000
( YP_008337454.1 )

sodium:calcium antiporter

NC_021882
(Helicobacter pylori UM298)

3e-111

24) K749_01395
( YP_007980076.1 )

sodium:calcium antiporter

NC_021216
(Helicobacter pylori UM299)

3e-111

25) cagN
( YP_003728726.1 )

cag pathogenicity island protein N

NC_014256
(Helicobacter pylori B8)

5e-111

26) cagN
( YP_002266124.1 )

cag pathogenicity island protein N

NC_011333
(Helicobacter pylori G27)

5e-111

27) HPSH_04200
( YP_001910305.1 )

cag pathogenicity island protein CagN

NC_010698
(Helicobacter pylori Shi470)

1e-110

28) HMPREF4655_21064
( YP_005770151.1 )

cag pathogenicity island protein

NC_017360
(Helicobacter pylori 35A)

8e-111

29) HPSH112_04345
( YP_006227563.1 )

cag pathogenicity island protein CagN

NC_017741
(Helicobacter pylori Shi112)

8e-111

30) cagN
( YP_007536670.1 )

cag pathogenicity island protein

NC_020508
(Helicobacter pylori OK113)

9e-111

31) MWE_0983
( YP_006338475.1 )

cag pathogenicity island protein (CagN, cag17)

NC_017926
(Helicobacter pylori XZ274)

9e-111

32) HPCU_02945
( YP_005766663.1 )

cag pathogenicity island protein (cagN, cag17)

NC_017358
(Helicobacter pylori Cuz20)

2e-110

33) HPPC18_02565
( YP_006228779.1 )

cag pathogenicity island protein CagN

NC_017742
(Helicobacter pylori PeCan18)

2e-110

34) cagN
( YP_007538428.1 )

cag pathogenicity island protein

NC_020509
(Helicobacter pylori OK310)

3e-110

35) cagN
( YP_005777279.1 )

cag pathogenicity island protein

NC_017367
(Helicobacter pylori F57)

5e-110

36) HPV225_0542
( YP_005763473.1 )

cag pathogenicity island protein (cagN)

NC_017355
(Helicobacter pylori v225d)

9e-110

37) cagN
( YP_005779055.1 )

cag pathogenicity island protein

NC_017368
(Helicobacter pylori F16)

1e-109

38) HPSH417_02570
( YP_006224161.1 )

cag pathogenicity island protein CagN

NC_017739
(Helicobacter pylori Shi417)

1e-109

39) HPSH169_02765
( YP_006225745.1 )

cag pathogenicity island protein CagN

NC_017740
(Helicobacter pylori Shi169)

5e-109

40) K751_03320
( YP_007983644.1 )

sodium:calcium antiporter

NC_021218
(Helicobacter pylori UM066)

1e-108

41) cag17
( YP_005793174.1 )

cag pathogenicity island protein N

NC_017382
(Helicobacter pylori 51)

2e-108

42) HPPC_02660
( YP_003926820.1 )

cag pathogenicity island protein (cagN, cag17)

NC_014555
(Helicobacter pylori PeCan4)

2e-107

43) HPPN120_02625
( YP_005788201.1 )

cag pathogenicity island protein (cagN, cag17)

NC_017378
(Helicobacter pylori Puno120)

4e-107

44) HPPN135_02655
( YP_005789748.1 )

cag pathogenicity island protein

NC_017379
(Helicobacter pylori Puno135)

4e-106

• Sequence Alignments

1) HPIN_04195 in NC_017372


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  435 bits (1638),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 292/306 (96%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDDEEITKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHD+ E+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNEINATPLN  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NA PLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  DNPNSNSSAETKSNKDDNFDEMINKVNGAFVKPAAPLVPDEWRTPeieiiineciiSSND  180
            DNPNSNSS+ETKSNKDDNFDEMINKVN AFVKPAAPLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDTTFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTKENEAKD++FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

2) HPKB_0805 in NC_017354


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  432 bits (1628),  Expect = 8e-123, Method: Compositional matrix adjust.
 Identities = 292/306 (96%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDDEEITKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHD+ E+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNEINAHPLN  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NA+PLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  DNPNSNSSAETKSNKDDNFDEMINKVNGAFVKPAAPLVPDEWRTPeieiiineciiSSND  180
            DNPNSNSS+ETKSNKDDNFDEMINKVN AFVKPAAPLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

3) HPLT_02655 in NC_017362


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  431 bits (1624),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 290/306 (95%), Positives = 302/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKKLVALGFKKIKTLHQRHDDEEITKE  60
            MKSIFKKLGSVALYSLV+YGGLNAINTALLPSEYKKLVALGFKKIKT+HQRHD+ E+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNEINAHPLN  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NA+PLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  GNPNSNSSAETKSNKDDNFDEMINKVNEAFVKPAAPLVPDEWRTPeieiiineciiSSND  180
            +NPNSNSS+ETKSNKDDNFDEMINKVNEAFVKPAAPLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILTPLLEKIQEIETENNKFSRQRLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKIL+PLLEKIQEIETENNKFSRQ+LSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

4) cagN in NC_011498


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  425 bits (1601),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 288/306 (95%), Positives = 299/306 (98%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELAALGFKKIKTLHQRHGDEEITEE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK L ALGFKKIKT+HQRH++ E+TEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKAAKHKGLQELNEINATPLN  120
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSS+QKKAAKHKGLQELNE NA PLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  DNPNSNSSAETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSS+ETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  TICEKRKKEMEQENNYQDTTNASKFGTTDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            +ICEKRKKEMEQENNYQD+TNAS FG+TDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHEKK  306
            IAH KK
Sbjct  301  IAHGKK  306

5) HPAG1_0513 in NC_008086


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  412 bits (1551),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 288/306 (95%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDDEEITKE  60
            MKSIFKKLGSVALYSLV+YGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHD+ E+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARVEQIQKNIEAFEKKNNPSIQKKAAKHKGLQELNEINAHPLN  120
            EK FATNALREKLRNDRAR EQIQKNIEAFEKKNN+SIQKKAAKHKGLQELNE NA+PLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  GNPNSNSSAETKSNKDDNFDEMINKVNEAFVKPAAPLVPDKWRTPeieiiineciiSSND  180
            +NPNSNSS+ETKSNKDDNFDEMINKVNEAFVKPAAPLVP+ WRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILTPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKIL+PLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICekkkkemeqeNNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEK+KKEMEQENNYQD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

6) C694_02775 in NC_018939


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  411 bits (1548),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 293/306 (96%), Positives = 299/306 (98%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTLHQRHDDEEVTKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKIKT+HQRHD+ EVT E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNEINATPLN  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NA PLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  DnpnsnsstetksnkDDNFDEMINKVNGAFVKPATPLVPDEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVN AFVKPA+PLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

7) HP0538 in NC_000915


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  411 bits (1548),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 293/306 (96%), Positives = 299/306 (98%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTLHQRHDDEEVTKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKIKT+HQRHD+ EVT E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNEINATPLN  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NA PLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  DnpnsnsstetksnkDDNFDEMINKVNGAFVKPATPLVPDEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVN AFVKPA+PLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

8) C695_02775 in NC_018937


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  411 bits (1548),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 293/306 (96%), Positives = 299/306 (98%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTLHQRHDDEEVTKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKIKT+HQRHD+ EVT E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNEINATPLN  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NA PLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  DnpnsnsstetksnkDDNFDEMINKVNGAFVKPATPLVPDEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVN AFVKPA+PLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

9) C730_02775 in NC_018938


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  411 bits (1548),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 293/306 (96%), Positives = 299/306 (98%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTLHQRHDDEEVTKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKIKT+HQRHD+ EVT E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNEINATPLN  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NA PLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  DnpnsnsstetksnkDDNFDEMINKVNGAFVKPATPLVPDEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVN AFVKPA+PLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

10) HPB14_04120 in NC_017733


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  410 bits (1544),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 293/306 (96%), Positives = 304/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKELVALGFKKIKTFHQRHDDEEVTEE  60
            MKSIFKKLGSVALYSLV+YGGLNAINTALLPSEYK LVALGFKKIKTFHQRHD+ EVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKAAKHRGLQELnetnanpln  120
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSS+QKKAAKH+GLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpngnSSTETKSNKDDNFDEMINKVNEAFVKPTAPLVPNEWRTPeieiiineciiSSND  180
            DNPN+NSSTETKSNKDDNFDEMINKVNEAFVKP+APLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRRKEMEQENNYQDTTNASEFGATDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKR+KEMEQENNYQD+TNASEFGATDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

11) HMPREF0462_0879 in NC_017375


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  409 bits (1538),  Expect = 9e-116, Method: Compositional matrix adjust.
 Identities = 298/306 (98%), Positives = 303/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLK  120
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPL+
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  DnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGVTDTKESEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFG TDTKE+EAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

12) HPSJM_02605 in NC_014560


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  406 bits (1526),  Expect = 8e-115, Method: Compositional matrix adjust.
 Identities = 288/306 (95%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTLYQRHDDKEITKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKIKT+ QRHD+KE+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKATKHRGLQELneinanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSS+QKKA+KH+GLQELNE NANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpngnSSTETKSNKDDNFDEMINKVNESFVKPAAPLVPDEWRTPeieiiineciiSSND  180
            DNPN+NSSTETKSNKDDNFDEMINKVNE+FVKPAAPLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGTTDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFG+TDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

13) HPSNT_02770 in NC_017376


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  405 bits (1523),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 293/306 (96%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTLHQRHDDEEVTKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKIKT+HQRHD+ EVT E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKAAKHKGLQElneinanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSS+QKKAAKHKGLQELNE NANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnssaETKSNKDDNFDEMINKVNEAFVKPAAPLVPDEWRTPEIEIVINECIISSND  180
            DNPNSNSS+ETKSNKDDNFDEMINKVNEAFVKPAAPLVP+EWRTPEIEI+INECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

14) cagN in NC_000921


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  405 bits (1523),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 286/306 (94%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKELVALGFKKIKTLYQRHDDKEITKE  60
            MKSIFKKLGSVALYSLV+YGGLNAINTALLPSEYK LVALGFKKIKT+ QRHD+KE+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARVEQIQKNIEAFEKKNNSSVQKKAAKHRGLQELneinanpln  120
            EK FATNALREKLRNDRAR EQIQKNIEAFEKKNNSS+QKKAAKH+GLQELNE NANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpngnSSTETKSNKDDNFDEMINKVNESFVKPAAPLVPDEWRTPeieiiineciiSSND  180
            DNPN+NSSTETKSNKDDNFDEMINKVNE+FVKPAAPLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSDNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNS+NR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGTTDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFG+TDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

15) HPELS_04020 in NC_017063


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  404 bits (1521),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 288/306 (95%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKKLVALGFKKITTLYQRHDDKEITKE  60
            MKSIFKKLGSVALYSLV+YGGLNAINTALLPSEYKKLVALGFKKI T+ QRHD+KE+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKAAKHRGLQELnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSS+QKKAAKH+GLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpngnSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPDEWRTPEIEIVINKCIISSND  180
            DNPN+NSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVP+EWRTPEIEI+IN CIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

16) HPGAM_02740 in NC_017371


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  404 bits (1520),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 288/306 (95%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTLYQRHDDKEITKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKIKT+ QRHD+KE+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKAAKHRGLQELnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSS+QKKAAKH+GLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpngnSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPDEWRTPEIEIVINKCIISSND  180
            DNPN+NSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVP+EWRTPEIEI+IN CIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSDNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNS+NR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

17) cagN in NC_017366


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  402 bits (1514),  Expect = 7e-114, Method: Compositional matrix adjust.
 Identities = 295/306 (97%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTFHQRHDDKEITKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKIKTFHQRHD+KE+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsdsstETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNS+SSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALDNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLAL+NSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIKQS  300
            AICEKRKKEMEQENN QD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQI QS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

18) cag17 in NC_017374


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  399 bits (1502),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 287/306 (94%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVAFYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTFYQRHDDKEITKE  60
            MKSIFKKLGSVA+YSLVIYGGLNAINTALLPSEYK LVALGFKKIKTF QRHD+KE+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKAAKHRGLQELnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSS+QKKAAKH+GLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpngnspTETKSNKDDNFDEMINKVNEAFVKPAAPLVPDEWRTPEIEIVINKCIISSND  180
            DNPN+NS+TETKSNKDDNFDEMINKVNEAFVKPAAPLVP+EWRTPEIEI+IN CIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFRATDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEF ATDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

19) cag17 in NC_017381


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  399 bits (1502),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 287/306 (94%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVAFYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTFYQRHDDKEITKE  60
            MKSIFKKLGSVA+YSLVIYGGLNAINTALLPSEYK LVALGFKKIKTF QRHD+KE+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKAAKHRGLQELnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSS+QKKAAKH+GLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpngnspTETKSNKDDNFDEMINKVNEAFVKPAAPLVPDEWRTPEIEIVINKCIISSND  180
            DNPN+NS+TETKSNKDDNFDEMINKVNEAFVKPAAPLVP+EWRTPEIEI+IN CIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFRATDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEF ATDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

20) hp908_0540 in NC_017357


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  399 bits (1502),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 287/306 (94%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVAFYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTFYQRHDDKEITKE  60
            MKSIFKKLGSVA+YSLVIYGGLNAINTALLPSEYK LVALGFKKIKTF QRHD+KE+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKAAKHRGLQELnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSS+QKKAAKH+GLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpngnspTETKSNKDDNFDEMINKVNEAFVKPAAPLVPDEWRTPEIEIVINKCIISSND  180
            DNPN+NS+TETKSNKDDNFDEMINKVNEAFVKPAAPLVP+EWRTPEIEI+IN CIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFRATDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEF ATDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

21) K750_04085 in NC_021217


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  398 bits (1496),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 289/306 (95%), Positives = 299/306 (98%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKITTLHQRHDDEEVTKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKI T+HQRHD+ EVT E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKAAKHKGLQElneinanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSS+QKKAAKHKGLQELNE NANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnssaETKSNKDDNFDEMINKVNEAFVKPAAPLVPDEWRTPeieiiineciiSSND  180
            DNPNSNSS+ETKSNKDDNFDEMINKVNEAFVKPAAPLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGTTDTKENEAKDATSSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFG+TDTKENEAKDA+ SNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

22) cagN in NC_017365


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  394 bits (1481),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 297/306 (98%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDDEEITKE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHD+ E+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

23) K748_08000 in NC_021882


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  394 bits (1482),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 298/306 (98%), Positives = 302/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKELVALGFKKIKTFHQRHDDKEITEE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYK LVALGFKKIKTFHQRHD+KE+TEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELneinanpln  120
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

24) K749_01395 in NC_021216


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  394 bits (1482),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 298/306 (98%), Positives = 302/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKELVALGFKKIKTFHQRHDDKEITEE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYK LVALGFKKIKTFHQRHD+KE+TEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELneinanpln  120
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

25) cagN in NC_014256


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  393 bits (1478),  Expect = 5e-111, Method: Compositional matrix adjust.
 Identities = 291/306 (96%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  3    LKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKKLVALGFKKIKTLYQRHDDEEITKE  62
            +KSIFKKLGSVALYSLV+YGGLNAINTALLPSEYKKLVALGFKKIKT+ QRHD+ E+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  63   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELneinanpln  122
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  123  dnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  182
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  183  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  242
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  243  AICEKRKKEMEQENNYQDTTNTSEFGATDTKENEAKDATFSNNHSKSELPNSVINQIEQS  302
            AICEKRKKEMEQENNYQD+TN+SEFGATDTKENEAKDA+FSNN+SKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  303  IAHGKK  308
            IAHGKK
Sbjct  301  IAHGKK  306

26) cagN in NC_011333


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  393 bits (1479),  Expect = 5e-111, Method: Compositional matrix adjust.
 Identities = 291/306 (96%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKELVALGFKKIKTLHQRHDDeevtee  60
            MKSIFKKLGSVALYSLV+YGGLNAINTALLPSEYK LVALGFKKIKT+HQRHD+ EVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   ekeFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELneinanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNE NANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  gnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPDEWRTPeieiiineciiSSND  180
            +NPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVP+EWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLRLVLNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGL+L LNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

27) HPSH_04200 in NC_010698


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  392 bits (1473),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 293/306 (96%), Positives = 302/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLHQRHDDKEVTEE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKT+HQRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKA+KHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  gnpnsnsstetksnkDDNFDEMINKVNEAFVKPATPLVPNEWRTPEIETIINECILSSND  180
            +NPNSNSSTETKSNKDDNFDEMINKVNEAFVKPA+PLVPNEWRTPEIE IINECI+SSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTK NEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

28) HMPREF4655_21064 in NC_017360


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  392 bits (1476),  Expect = 8e-111, Method: Compositional matrix adjust.
 Identities = 301/306 (99%), Positives = 303/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDekevtee  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   ekeFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

29) HPSH112_04345 in NC_017741


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  392 bits (1476),  Expect = 8e-111, Method: Compositional matrix adjust.
 Identities = 296/306 (97%), Positives = 303/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLHQRHDDKEVTEE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKT+HQRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQElnetnanpln  120
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKA+KHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  gnpnsnsstetksnkDDNFDEMINKVNEAFVKPATPLVPNEWRTPEIEAIINECIISSND  180
            +NPNSNSSTETKSNKDDNFDEMINKVNEAFVKPA+PLVPNEWRTPEIE IINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTK NEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

30) cagN in NC_020508


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  392 bits (1475),  Expect = 9e-111, Method: Compositional matrix adjust.
 Identities = 300/306 (99%), Positives = 304/306 (99%), Gaps = 0/306 (0%)

Query  1    MKGIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60
            MK+IFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATKALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  120
            EKKFAT+ALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

31) MWE_0983 in NC_017926


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  392 bits (1475),  Expect = 9e-111, Method: Compositional matrix adjust.
 Identities = 296/306 (97%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTFHQRHDDKEITKE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKIKTFHQRHD+KE+T E
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLNKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCL KGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDAKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATD+KENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

32) HPCU_02945 in NC_017358


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  391 bits (1472),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 294/306 (97%), Positives = 302/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLHQRHDDKEVTEE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKT+HQRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKA+KHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  gnpnsnsstetksnkDDNFDEMINKVNEAFVKPATPLVPNEWRTPEIEAIINECILSSND  180
            +NPNSNSSTETKSNKDDNFDEMINKVNEAFVKPA+PLVPNEWRTPEIE IINECI+SSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTK NEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

33) HPPC18_02565 in NC_017742


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  391 bits (1470),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 295/306 (97%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTLYQRHDDKEVTEE  60
            MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYK LVALGFKKIKT+ QRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQElnetnanpln  120
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKA+KHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  gnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIETTINECIISSND  180
            +NPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIE  INECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTK NEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

34) cagN in NC_020509


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  390 bits (1468),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 298/306 (98%), Positives = 304/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDDKEVTEE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATKALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  120
            EKKFAT+ALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDAKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATD+KENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

35) cagN in NC_017367


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  390 bits (1466),  Expect = 5e-110, Method: Compositional matrix adjust.
 Identities = 299/306 (98%), Positives = 303/306 (99%), Gaps = 0/306 (0%)

Query  1    MKGIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDekevtee  60
            MK+IFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   ekeFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

36) HPV225_0542 in NC_017355


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  389 bits (1462),  Expect = 9e-110, Method: Compositional matrix adjust.
 Identities = 294/306 (97%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLYQRHDDKEVTEE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKT+ QRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKA+KHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  gnpnsnsstetksnkDDNFDEMINKVNEAFVKPATPLVPNEWRTPEIETIINECIISSND  180
            +NPNSNSSTETKSNKDDNFDEMINKVNEAFVKPA+PLVPNEWRTPEIE IINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTK NEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

37) cagN in NC_017368


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  388 bits (1460),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 298/306 (98%), Positives = 303/306 (99%), Gaps = 0/306 (0%)

Query  1    MKGIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDekevtee  60
            MK+IFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   ekeFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLLPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPL+PNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK+IKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

38) HPSH417_02570 in NC_017739


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  388 bits (1461),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 295/306 (97%), Positives = 302/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLYQRHDDKEVTEE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKT+ QRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQElnetnanpln  120
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKA+KHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  gnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIETIINECILSSND  180
            +NPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIE IINECI+SSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDAAFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTK NEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

39) HPSH169_02765 in NC_017740


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  386 bits (1453),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 293/306 (96%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLYQRHDDKEVTEE  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKT+ QRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQElnetnanpln  120
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKA+KHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  gnpnsnsstetksnkDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIETIINECILSRND  180
            +NPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIE IINECI+S ND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDAVFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENNYQD+TNASEFGATDTK NEAKDA FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

40) K751_03320 in NC_021218


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  385 bits (1447),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 297/306 (98%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDekevtee  60
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   ekeFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstenksnkddnFDEMINKVNGAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTE KSNKDDNFDEMINKVN AFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQGTTNASEFGATDTKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN Q++TNASEFGATDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

41) cag17 in NC_017382


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  385 bits (1446),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 295/306 (97%), Positives = 301/306 (99%), Gaps = 0/306 (0%)

Query  1    MKGIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDekevtee  60
            MK+IFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  61   ekeFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  120
            EK FATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  121  dnpnsnsstenksnkddnFDEMINKVNEAFVKPAAPLVPNEWRTPeieiiineciiSSND  180
            DNPNSNSSTE KSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  181  YDGLRKCLIKNIKNQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  240
            YDGLRKCLIK IK+QKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  241  AICEKRKKEMEQENNHQDTTNASEFGATDAKENEAKDATFSNNRSKSELPNSVINQIEQS  300
            AICEKRKKEMEQENN QD+TNASEFGATD+KENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  301  IAHGKK  306
            IAHGKK
Sbjct  301  IAHGKK  306

42) HPPC_02660 in NC_014555


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  381 bits (1433),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 291/306 (96%), Positives = 300/306 (99%), Gaps = 3/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKL---YQRHDDKEVTEE  57
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKK+    QRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  58   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQElnetnanpln  117
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKA+KHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  118  gnpnsnsstetksnkDDNFDEMINKVNEAFVKPATPLVPNEWRTPEIETIINECIISSND  177
            +NPNSNSSTETKSNKDDNFDEMINKVNEAFVKPA+PLVPNEWRTPEIE IINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  178  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  237
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  238  AICEKRKKEMEQENNYQDTTNTSEFGATDTKENEAKDATFSNNRSKSELPNSVINQIEQS  297
            AICEKRKKEMEQENNYQD+TN+SEFGATDTKENEAKDA+FSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  298  IAHGKK  303
            IAHGKK
Sbjct  301  IAHGKK  306

43) HPPN120_02625 in NC_017378


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  380 bits (1429),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 293/306 (96%), Positives = 299/306 (98%), Gaps = 3/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKL---YQRHDDKEVTEE  57
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKK+    QRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  58   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQElnetnanpln  117
            EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  118  gnpnsnsstetksnkDDNFDEMINKVNEAFVKPATPLVPNEWRTPEIETIINECIISSND  177
            +NPNSNSSTETKSNKDDNFDEMINKVNEAFVKPA+PLVPNEWRTPEIE IINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  178  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  237
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  238  AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDAAFSNNRSKSELPNSVINQIEQS  297
            AICEKRKKEMEQENNYQD+TNASEFGATDTK NEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  298  IAHGKK  303
            IAHGKK
Sbjct  301  IAHGKK  306

44) HPPN135_02655 in NC_017379


> AB120418|18|G18|46091399|BAD13844.1|Helicobacter_pylori_F28|+|23136..24056|HP0538|-|cag 
pathogenicity island protein
Length=306

 Score =  377 bits (1417),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 290/306 (95%), Positives = 297/306 (98%), Gaps = 3/306 (0%)

Query  1    MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKL---YQRHDDKEVTEE  57
            MKSIFKKLGSVALY LVIYGGLNAINTALLPSEYKKLVALGFKK+    QRHD+KEVTEE
Sbjct  1    MKSIFKKLGSVALYSLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEE  60

Query  58   EKKFAINALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQElnetnanpln  117
            EKKFA NALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKA+KHKGLQELNETNANPLN
Sbjct  61   EKKFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLN  120

Query  118  gnpnsnsstetksnkDDNFDEMINKVNKAFVKPATPLVPNEWRTPEIETIINECIISSND  177
            +NPNSNSSTETKSNKDDNFDEMINKVN AFVKPA+PLVPNEWRTPEIE IINECIISSND
Sbjct  121  DNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPNEWRTPEIEIIINECIISSND  180

Query  178  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC  237
            YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNR+FLIASC
Sbjct  181  YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRAFLIASC  240

Query  238  AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDAAFSNNRSKSELPNSVINQIEQS  297
            AICEKRKKEMEQENNYQD+TNASEFGATDTK NEAKDAAFSNNRSKSELPNSVINQIEQS
Sbjct  241  AICEKRKKEMEQENNYQDATNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS  300

Query  298  IAHGKK  303
            IAHGKK
Sbjct  301  IAHGKK  306