Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of y2408 gene of NC_004088_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECUMN_2282
( YP_002413000.1 )

putative lambdoid prophage protein

NC_011751
(Escherichia coli UMN026)

5e-27

100

2) dksA2
( NP_992996.1 )

DnaK suppressor protein

NC_005810
(Yersinia pestis 91001)

5e-27

100

3) YPA_1278
( YP_651190.1 )

hypothetical protein

NC_008150
(Yersinia pestis Antiqua)

5e-27

100

4) y2408
( NP_669715.1 )

hypothetical protein

NC_004088
(Yersinia pestis KIM)

5e-27

100

5) YPDSF_1224
( YP_001162593.1 )

hypothetical protein

NC_009381
(Yersinia pestis Pestoides F)

5e-27

100

6) YPTB1587
( YP_070115.1 )

hypothetical protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

5e-27

100

7) YPTS_1703
( YP_001872129.1 )

TraR/DksA family transcriptional regulator

NC_010634
(Yersinia pseudotuberculosis PB1/+)

5e-27

100

8) ECED1_2258
( YP_002398197.1 )

putative lambdoid prophage protein from the DksA/TraR family with a zinc finger

NC_011745
(Escherichia coli ED1a)

2e-26

9) traR
( YP_049726.1 )

conjugal transfer protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

8e-21

10) W5S_1629
( YP_006282593.1 )

C4-type zinc finger protein, DksA/TraR family

NC_017845
(Pectobacterium sp. SCC3193)

2e-20

11) Dd586_1464
( YP_003333037.1 )

TraR/DksA family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

3e-20

12) Pecwa_1685
( YP_003259079.1 )

TraR/DksA family transcriptional regulator

NC_013421
(Pectobacterium wasabiae WPP163)

4e-20

13) Dd1591_1494
( YP_003003831.1 )

TraR/DksA family transcriptional regulator

NC_012912
(Dickeya zeae Ech1591)

8e-20

14) Q7S_09565
( YP_005401714.1 )

phage/conjugal plasmid C-4 type zinc finger protein, TraR family

NC_017047
(Rahnella aquatilis HX2)

1e-19

15) Dd586_2660
( YP_003334207.1 )

TraR/DksA family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

2e-19

16) KOX_24545
( YP_005020863.1 )

phage/conjugal plasmid C-4 type zinc finger protein, TraR family

NC_016612
(Klebsiella oxytoca KCTC 1686)

3e-19

17) Rahaq2_1735
( YP_005199748.1 )

phage/conjugal plasmid C-4 type zinc finger protein, TraR family

NC_016818
(Rahnella aquatilis CIP 78.65)

9e-19

18) KPK_1787
( YP_002237634.1 )

phage/conjugal plasmid C-4 type zinc finger protein, TraR family

NC_011283
(Klebsiella pneumoniae 342)

2e-18

19) GU3_08620
( YP_005092230.1 )

phage protein

NC_016745
(Oceanimonas sp. GK1)

5e-08

20) GM18_3337
( YP_004200049.1 )

phage/conjugal plasmid C-4 type zinc finger protein, TraR family

NC_014973
(Geobacter sp. M18)

1e-06

21) KPHS_12350
( YP_005225535.1 )

phage/conjugal plasmid C-4 type zinc finger protein, TraR family

NC_016845
(Klebsiella pneumoniae HS11286)

1e-06

22) MU9_2032
( YP_007505451.1 )

hypothetical protein

NC_020418
(Morganella morganii KT)

1e-06

23) K756_05650
( YP_008123872.1 )

DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR family

NC_021521
(Haemophilus parasuis ZJ0906)

5e-06

24) Dalk_3561
( YP_002432717.1 )

TraR/DksA family transcriptional regulator

NC_011768
(Desulfatibacillum alkenivorans AK-01)

5e-06

25) dnaK
( YP_002475146.1 )

DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR family

NC_011852
(Haemophilus parasuis SH0165)

6e-06

26) Psyc_0478
( YP_263775.1 )

phage TraR/DksA family protein

NC_007204
(Psychrobacter arcticus 273-4)

9e-06

27) PSPA7_0695
( YP_001346090.1 )

hypothetical protein

NC_009656
(Pseudomonas aeruginosa PA7)

2e-05

28) PSPA7_5061
( YP_001350397.1 )

hypothetical protein

NC_009656
(Pseudomonas aeruginosa PA7)

2e-05

29) plu1033
( NP_928362.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

7e-05

30) PSPPH_4962
( YP_277048.1 )

prophage PSPPH06, DksA/TraR family C4-type zinc finger protein

NC_005773
(Pseudomonas syringae 1448A)

1e-04

31) EbC_00980
( YP_003739489.1 )

hypothetical protein

NC_014306
(Erwinia billingiae Eb661)

3e-04

32) PAJ_2657
( YP_005935533.1 )

hypothetical protein

NC_017531
(Pantoea ananatis AJ13355)

4e-04

33) CP80
( YP_003521714.1 )

CP80

NC_013956
(Pantoea ananatis LMG 20103)

4e-04

34) PANA5342_0640
( YP_005194070.1 )

TraR/DksA family transcriptional regulator

NC_016816
(Pantoea ananatis LMG 5342)

4e-04

35) PAGR_g0616
( YP_005991372.1 )

TraR/DksA family transcriptional regulator

NC_017554
(Pantoea ananatis PA13)

4e-04

36) UMN179_00229
( YP_004419163.1 )

hypothetical protein

NC_015460
(Gallibacterium anatis UMN179)

7e-04

37) Psefu_1439
( YP_004473509.1 )

phage/conjugal plasmid C-4 type zinc finger protein, TraR family

NC_015556
(Pseudomonas fulva 12-X)

0.002

38) PSF113_4314
( YP_005209705.1 )

C4-type zinc finger protein, DksA/TraR family

NC_016830
(Pseudomonas fluorescens F113)

0.003

39) Dvul_1463
( YP_966908.1 )

TraR/DksA family transcriptional regulator

NC_008751
(Desulfovibrio vulgaris DP4)

0.003

40) Dvul_2758
( YP_968196.1 )

TraR/DksA family transcriptional regulator

NC_008751
(Desulfovibrio vulgaris DP4)

0.007

41) H650_08800
( YP_008107586.1 )

hypothetical protein

NC_021500
(Enterobacter sp. R4-368)

0.008

42) M621_04030
( YP_008157646.1 )

hypothetical protein

NC_021659
(Serratia plymuthica S13)

5.4

• Sequence Alignments

1) ECUMN_2282 in NC_011751


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60
           MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QSILEKRRR  69
           QSILEKRRR
Sbjct  61  QSILEKRRR  69

2) YPA_1278 in NC_008150


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60
           MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QSILEKRRR  69
           QSILEKRRR
Sbjct  61  QSILEKRRR  69

3) dksA2 in NC_005810


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60
           MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QSILEKRRR  69
           QSILEKRRR
Sbjct  61  QSILEKRRR  69

4) y2408 in NC_004088


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60
           MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QSILEKRRR  69
           QSILEKRRR
Sbjct  61  QSILEKRRR  69

5) YPDSF_1224 in NC_009381


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60
           MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QSILEKRRR  69
           QSILEKRRR
Sbjct  61  QSILEKRRR  69

6) YPTB1587 in NC_006155


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60
           MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QSILEKRRR  69
           QSILEKRRR
Sbjct  61  QSILEKRRR  69

7) YPTS_1703 in NC_010634


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60
           MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QSILEKRRR  69
           QSILEKRRR
Sbjct  61  QSILEKRRR  69

8) ECED1_2258 in NC_011745


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score =  112 bits (407),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 68/69 (99%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRLCGKAIPEKRRQTLPGVTTCTDC  60
           MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCR+CGKAIPEKRRQTLPGVTTCTDC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QSILEKRRR  69
           QSILEKRRR
Sbjct  61  QSILEKRRR  69

9) traR in NC_004547


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 93.6 bits (336),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 51/69 (74%), Positives = 64/69 (93%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQEFNEQRLEEMIEQNRFKPAITPSLFHCQFCGNPIPEKRRETLPGVSTCTEC  60
           MPDEIDRDQ FNE+ LE +IEQ+R++P+ TPSL HC+FCG++IPEKRR+TLPGV+TCT+C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QSILERRRR  69
           QSILE+RRR
Sbjct  61  QSILEKRRR  69

10) W5S_1629 in NC_017845


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 92.6 bits (332),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 50/69 (73%), Positives = 63/69 (92%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQEFNEQRLEEMIEQNRFKPATTPSLHYCRLCGEPIPEKRRQTLPGVTTCTEC  60
           MPDEIDRDQ FNE+ LE +IEQ+R++P+ TPSL+ CR+CG +IPEKRRQTLPGVTTCT+C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QTILERRQR  69
           Q+ILE+R+R
Sbjct  61  QSILEKRRR  69

11) Dd586_1464 in NC_013592


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 91.5 bits (328),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 49/69 (72%), Positives = 63/69 (92%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQEFNEQRLEEMIEQNRFKPATTPSLHYCRLCGEPIPEKRRQTLPGVTTCTEC  60
           MPDEIDRDQ FNE+ LE +IEQ+R++P+ TPSL+ CR+CG +IPEKRRQTLPGVTTCT+C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QAIIERRQR  69
           Q+I+E+R+R
Sbjct  61  QSILEKRRR  69

12) Pecwa_1685 in NC_013421


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 91.2 bits (327),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 49/69 (72%), Positives = 63/69 (92%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQEFNEQRLEEMIEQNRFKPATTPSLHYCRLCGEPIPEQRRQTLPGVTTCTEC  60
           MPDEIDRDQ FNE+ LE +IEQ+R++P+ TPSL+ CR+CG +IPE+RRQTLPGVTTCT+C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QTILERRQR  69
           Q+ILE+R+R
Sbjct  61  QSILEKRRR  69

13) Dd1591_1494 in NC_012912


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 90.2 bits (323),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 48/69 (70%), Positives = 63/69 (92%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQEFNEQRLEEMIEQNRFKPATTPSLHYCRLCGEPIPEQRRQTLPGVTTCTEC  60
           MPDEIDRDQ FNE+ LE +IEQ+R++P+ TPSL+ CR+CG +IPE+RRQTLPGVTTCT+C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QAIIERRQR  69
           Q+I+E+R+R
Sbjct  61  QSILEKRRR  69

14) Q7S_09565 in NC_017047


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 89.7 bits (321),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 51/69 (74%), Positives = 60/69 (87%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQEFNEQRLEEMIEQSRFKPGPTPSLFHCRVCGKPIPEKRRLALPGITTCTEC  60
           MPDEIDRDQ FNE+ LE +IEQSR++P PTPSL HCR CGK+IPEKRR +LPG+TTCT+C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QEKLERRRR  69
           Q  LE+RRR
Sbjct  61  QSILEKRRR  69

15) Dd586_2660 in NC_013592


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 89.4 bits (320),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 48/67 (72%), Positives = 61/67 (92%), Gaps = 0/67 (0%)

Query  1   MPDEIDRDQEFNEQRLEEMIEQSRFKPATTPSLHYCRLCGEPISEKRRETLPGVTTCTEC  60
           MPDEIDRDQ FNE+ LE +IEQSR++P+ TPSL+ CR+CG +I+EKRR+TLPGVTTCT+C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QTILERR  67
           Q+ILE+R
Sbjct  61  QSILEKR  67

16) KOX_24545 in NC_016612


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 88.6 bits (317),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 50/69 (73%), Positives = 60/69 (87%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQEFNEQRLVEMIEQSRFKPGSTPSLFHCRVCGKPIPEKRRQALPGITTCTEC  60
           MPDEIDRDQ FNE+ L  +IEQSR++P +TPSL HCR CGK+IPEKRRQ+LPG+TTCT+C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QEKLERRRR  69
           Q  LE+RRR
Sbjct  61  QSILEKRRR  69

17) Rahaq2_1735 in NC_016818


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 86.8 bits (310),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 49/69 (72%), Positives = 59/69 (86%), Gaps = 0/69 (0%)

Query  1   MPDEIDRDQEFNEQQLEEMIEQSRFKTGSTPSLFHCRVCGKPIPEKRRQALPGITTCTEC  60
           MPDEIDRDQ FNE+ LE +IEQSR++  +TPSL HCR CGK+IPEKRRQ+LPG+TTCT+C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QEKLERRTR  69
           Q  LE+R R
Sbjct  61  QSILEKRRR  69

18) KPK_1787 in NC_011283


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 85.7 bits (306),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 47/67 (71%), Positives = 58/67 (87%), Gaps = 0/67 (0%)

Query  1   MPDEIDRDQEFNEQRLEEMIEQSRFKPGSAPSLFHCRVCGKPIPEKRRQTLPGITTCKEC  60
           MPDEIDRDQ FNE+ LE +IEQSR++P ++PSL HCR CGK+IPEKRRQTLPG+TTC +C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QEKLERH  67
           Q  LE++
Sbjct  61  QSILEKR  67

19) GU3_08620 in NC_016745


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 51.3 bits (175),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 28/66 (43%), Positives = 45/66 (69%), Gaps = 0/66 (0%)

Query  2   DVIDHANNLNAWLLEKQLAAQTGHRSAAPSRHQCEECDDPIPEARRVALPGVTLCVNCQT  61
           D ID+ + +N + LE  +     + +++PS ++C  C+ +IPE RR +LPGVT C +CQ+
Sbjct  3   DEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDCQS  62

Query  62  LLEKRR  67
           +LEKRR
Sbjct  63  ILEKRR  68

20) GM18_3337 in NC_014973


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 46.9 bits (158),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 31/65 (48%), Positives = 42/65 (65%), Gaps = 0/65 (0%)

Query  1   MADEIDLAQEISERHLEAALAGHLDHKPAAESLTHCEECGRPIPEGRRQAQPGCTRCVRC  60
           M+DEID  Q ++ER LEA +     +  ++ SL HC  CG++IPE RRQ+ PG T C  C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  61  QSGIE  65
           QS +E
Sbjct  61  QSILE  65

21) KPHS_12350 in NC_016845


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 46.6 bits (157),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 40/62 (65%), Gaps = 1/62 (1%)

Query  1   MPEIIDQANELAERRLEMTIQNMRINHNAVSA-THCRDCGEEIPERRRELVAGCQRCADC  59
           MP+ ID+ + + ER LE  I++ R+   + ++  HCR CG  IPE+RR+ ++G   C+DC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  60  QE  61
           Q 
Sbjct  61  QS  62

22) MU9_2032 in NC_020418


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 46.3 bits (156),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 26/63 (42%), Positives = 41/63 (66%), Gaps = 1/63 (1%)

Query  1   MSDEIDRANDHAALVLESQIAAARITAVGVSAFE-CEGCGKPIPESRRRAVIGCTMCIDC  59
           M+DEIDR +      LE+ I  +R+ +   ++++ C  CGK+IPE RR+++ G T C DC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  60  QAI  62
           Q+I
Sbjct  61  QSI  63

23) K756_05650 in NC_021521


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 44.8 bits (150),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 30/70 (43%), Positives = 44/70 (63%), Gaps = 3/70 (4%)

Query  1   MKDQIDRANELAEK--EREFALAKLRNKPTAYSLTHCEDCDEPIPEARRQNVQGCTRCID  58
           M D+IDR + + E+  E  +  ++LR  PT+ SL HC  C+ +IPE RRQ + G T C D
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTP-SLQHCRFCGKAIPEKRRQTLPGVTTCTD  59

Query  59  CQQIYEYKQK  68
           CQ I E +++
Sbjct  60  CQSILEKRRR  69

24) Dalk_3561 in NC_011768


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 44.5 bits (149),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 29/68 (43%), Positives = 40/68 (59%), Gaps = 1/68 (1%)

Query  1   MPDPTDRAQEAAADYTRFSIEAARSRGSQS-TLADCQDCGDPIPEARRKAVPGCTRCLDC  59
           MPD  DR Q          IE +R R + + +L +C+ CG +IPE RR+++PG T C DC
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  60  QETYEQRR  67
           Q   E+RR
Sbjct  61  QSILEKRR  68

25) dnaK in NC_011852


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 44.2 bits (148),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 30/70 (43%), Positives = 44/70 (63%), Gaps = 3/70 (4%)

Query  1   MKDQIDRANELAEK--EREFALAKLRNKPTACSLIHCEDCDEPIPEARRQNVQGCTRCID  58
           M D+IDR + + E+  E  +  ++LR  PT+ SL HC  C+ +IPE RRQ + G T C D
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTP-SLQHCRFCGKAIPEKRRQTLPGVTTCTD  59

Query  59  CQQIYEYKQK  68
           CQ I E +++
Sbjct  60  CQSILEKRRR  69

26) Psyc_0478 in NC_007204


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 43.7 bits (146),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 30/73 (42%), Positives = 42/73 (58%), Gaps = 11/73 (15%)

Query  1   MADDADRANDYVDLTMAHCL------SRAPKFDKPSLTECMECGEDIPAKR-QAMGGVTL  53
           M+D+ DR + + +    +CL      SR      PSL +C  CG  IP KR Q++ GVT 
Sbjct  1   MPDEIDRDQAFNE----RCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTT  56

Query  54  CVDCQSVFEKRGK  66
           C DCQS++EKR +
Sbjct  57  CTDCQSILEKRRR  69

27) PSPA7_0695 in NC_009656


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 42.4 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 32/68 (48%), Positives = 45/68 (67%), Gaps = 4/68 (5%)

Query  1   MADCFDRAQARELQDRELALQAHQVRVRPS-GPSLTHCQECGEQIPEARR-ALGGIIRCT  58
           M+D +DR QA  +++R L    +Q R+RP+  PSL HC+ CG  IPE RR +L G+  CT
Sbjct  1   MPDEIDRDQA--FNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCT  58

Query  59  PCQARFEK  66
            CQ+ +EK
Sbjct  59  DCQSILEK  66

28) PSPA7_5061 in NC_009656


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 42.4 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 32/68 (48%), Positives = 45/68 (67%), Gaps = 4/68 (5%)

Query  1   MADCFDRAQARELQDRELALQAHQVRVRPS-GPSLTHCQECGEQIPEARR-ALGGIIRCT  58
           M+D +DR QA  +++R L    +Q R+RP+  PSL HC+ CG  IPE RR +L G+  CT
Sbjct  1   MPDEIDRDQA--FNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCT  58

Query  59  PCQARFEK  66
            CQ+ +EK
Sbjct  59  DCQSILEK  66

29) plu1033 in NC_005126


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 40.8 bits (135),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 30/70 (43%), Positives = 37/70 (53%), Gaps = 3/70 (4%)

Query  1   MSDDIDDTRAQAVTAMWLEEQIAVVRREMHTGRVSLKYCEGCGDRIDEQRRQILPGVQLC  60
           M+D+ID  R QA     LE  I   R    T   SL+ C  CG  I E+RRQ LPGV  C
Sbjct  1   MPDEID--RDQAFNERCLEALIEQSR-LRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTC  57

Query  61  VGCQEVAEHW  70
            +CQ + E +
Sbjct  58  TDCQSILEKR  67

30) PSPPH_4962 in NC_005773


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 40.3 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 28/66 (43%), Positives = 42/66 (64%), Gaps = 2/66 (3%)

Query  5   FDRAQALEQRQRDQAIAAQLAKPRASGPSLTHCQDCDKEIPPAR-QALGGMTRCVPCQTL  63
           +DR QA+++R  +  I     +P ++ PSL HC+ C+K IP  R Q+L G+T C  CQ++
Sbjct  5   IDRDQAFNERCLEALIEQSRLRP-TPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDCQSI  63

Query  64  TEKGRR  69
            EK RR
Sbjct  64  LEKRRR  69

31) EbC_00980 in NC_014306


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 38.5 bits (126),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 27/67 (41%), Positives = 42/67 (63%), Gaps = 1/67 (1%)

Query  1   MADAMDLEQERQAETLARQISNARQPPTQPSAF-FCLECDEPIPEVRRAAIFGVTTCVFC  59
           M+D +D +Q  +   L   I ++R  PT  +++  C  C+ +IPE RR ++ GVTTC  C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  60  QSLLERR  66
           QS+LE+R
Sbjct  61  QSILEKR  67

32) PAJ_2657 in NC_017531


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 38.2 bits (125),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 28/69 (41%), Positives = 37/69 (54%), Gaps = 1/69 (1%)

Query  1   MADAIDIAQQRSEEILAQNIAQVTQRPVAIGA-SLCEECDAPIPEARRRALQGVTRCLSC  59
           M+D ID  Q  +E  L   I Q   RP +  +   C  C+ +IPE RR++L GVT C  C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  60  QELSELRAR  68
           Q + E R R
Sbjct  61  QSILEKRRR  69

33) CP80 in NC_013956


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 38.2 bits (125),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 28/69 (41%), Positives = 37/69 (54%), Gaps = 1/69 (1%)

Query  1   MADAIDIAQQRSEEILAQNIAQVTQRPVAIGA-SFCEECDAPIPEARRRALQGVTRCLSC  59
           M+D ID  Q  +E  L   I Q   RP +  +   C  C+ +IPE RR++L GVT C  C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  60  QELSELRAR  68
           Q + E R R
Sbjct  61  QSILEKRRR  69

34) PAGR_g0616 in NC_017554


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 38.2 bits (125),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 28/69 (41%), Positives = 37/69 (54%), Gaps = 1/69 (1%)

Query  1   MADAIDIAQQRSEEILAQNIAQVTQRPVAIGA-SLCEECDAPIPEARRRALQGVTRCLSC  59
           M+D ID  Q  +E  L   I Q   RP +  +   C  C+ +IPE RR++L GVT C  C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  60  QELSELRAR  68
           Q + E R R
Sbjct  61  QSILEKRRR  69

35) PANA5342_0640 in NC_016816


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 38.2 bits (125),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 28/69 (41%), Positives = 37/69 (54%), Gaps = 1/69 (1%)

Query  1   MADAIDIAQQRSEEILAQNIAQVTQRPVAIGA-SLCEECDAPIPEARRRALQGVTRCLSC  59
           M+D ID  Q  +E  L   I Q   RP +  +   C  C+ +IPE RR++L GVT C  C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  60  QELSELRAR  68
           Q + E R R
Sbjct  61  QSILEKRRR  69

36) UMN179_00229 in NC_015460


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 37.4 bits (122),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 28/67 (42%), Positives = 42/67 (63%), Gaps = 2/67 (2%)

Query  2   DQIDRANELAQMERDAQI-KRRqqqqpqqSFTHCIDCEEPIPENRR-KLQGVTRCIECQT  59
           D+IDR + + +   +A I + R +  P  S+ HC  C  +IPE+RR  L GVT C +CQ+
Sbjct  3   DEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDCQS  62

Query  60  IYEQRQR  66
           I E+R+R
Sbjct  63  ILEKRRR  69

37) Psefu_1439 in NC_015556


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 36.4 bits (118),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 0/50 (0%)

Query  21  LAHRKAVAPAYTISAEHCESCGIEIPAARRLAVPGCQTCVDCQSRREVRR  70
           L ++  + P+ T S +HC  CG  IP  RR ++PG  TC DCQS  E RR
Sbjct  19  LIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDCQSILEKRR  68

38) PSF113_4314 in NC_016830


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 35.3 bits (114),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 35/57 (62%), Gaps = 1/57 (1%)

Query  13  QERIDQALAARSAFKPALPGHSLLFCESCDDPIPEARRLAQQGCTQCVNCQSIDEMR  69
           +ER  +AL  +S ++P+ P  SL  C  C+ +IPE RR +  G T C +CQSI E R
Sbjct  12  NERCLEALIEQSRLRPT-PTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDCQSILEKR  67

39) Dvul_1463 in NC_008751


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 35.1 bits (113),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 22/53 (42%), Positives = 31/53 (59%), Gaps = 2/53 (3%)

Query  16  LEALARNRASRPVHAAGPPPTRCEECGDPIPEARRAAVPGVRLCVTCQQEQER  68
           LEAL  +   RP  ++ P+  +C  CG +IPE RR ++PGV  C  CQ   E+
Sbjct  16  LEALIEQSRLRP--TPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDCQSILEK  66

40) Dvul_2758 in NC_008751


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 34.3 bits (110),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 22/53 (42%), Positives = 29/53 (55%), Gaps = 2/53 (3%)

Query  16  LEALARNRASRPVHRAGPRPTRCEECGDPIPEARRAAVPGVRLCVTCQQEQER  68
           LEAL  +   RP   + P   +C  CG +IPE RR ++PGV  C  CQ   E+
Sbjct  16  LEALIEQSRLRPT--PTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDCQSILEK  66

41) H650_08800 in NC_021500


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 34.0 bits (109),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 27/67 (41%), Positives = 42/67 (63%), Gaps = 5/67 (7%)

Query  1   MADEMDLAQQREMEER--ERHIQHARNRLLAPSRLT-CESCDAPIPQARRMALPGVTCCV  57
           M+DE+D  +++  +ER  E  I+++R R  + + L  C  C+ +IP+ RR +LPGVT C 
Sbjct  1   MPDEID--RDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCT  58

Query  58  CCQQIAE  64
            CQ I E
Sbjct  59  DCQSILE  65

42) M621_04030 in NC_021659


> NC_004088_P1|17|G16|22126292|NP_669715.1|Yersinia_pestis_KIM|+|33408..33617|-|y2408|hypothetical 
protein
Length=69

 Score = 24.5 bits (73),  Expect = 5.4, Method: Compositional matrix adjust.
 Identities = 28/69 (41%), Positives = 39/69 (57%), Gaps = 1/69 (1%)

Query  1   MADTIDMAQERQALMLEKQIAHARPAITQTSAL-FCIECEaaiptarriaipGVSRCVTC  59
           M+D ID  Q  +   LE  I ++R   T T++L  C  C  AIP  RR ++PGV+ C  C
Sbjct  1   MPDEIDRDQAFNERCLEALIEQSRLRPTPTPSLQHCRFCGKAIPEKRRQTLPGVTTCTDC  60

Query  60  QEIAEAQQR  68
           Q I E ++R
Sbjct  61  QSILEKRRR  69