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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of GQ338312

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SFxv_5036
( YP_005712085.1 )

IS600 ORF2

NC_017319
(Shigella flexneri 2002017)

2e-14

2) CP0189
( NP_858322.1 )

IS600 ORF2

NC_004851
(Shigella flexneri 301)

2e-14

3) SSON_P152
( YP_313407.1 )

IS600 ORF2

NC_007385
(Shigella sonnei Ss046)

2e-14

4) B932_2983
( YP_006985459.1 )

transposase

NC_019396
(Gluconobacter oxydans H24)

2e-05

5) B932_3076
( YP_006985552.1 )

transposase

NC_019396
(Gluconobacter oxydans H24)

2e-05

6) B5T_02079
( YP_006820696.1 )

integrase catalytic subunit

NC_018691
(Alcanivorax dieselolei B5)

0.16

• Sequence Alignments

1) SFxv_5036 in NC_017319


> GQ338312|17|G16|255348343|ACU09485.1|Escherichia_coli_71074|+|8231..8386|-|-|hypothetical 
protein
Length=51

 Score = 72.1 bits (254),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 37/50 (74%), Positives = 45/50 (90%), Gaps = 0/50 (0%)

Query  6   QRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESF  55
           QRPP GLIHHS+RGSQYC+ DYR IQE+FGLKTSM+RKGN YDN++M ++
Sbjct  2   QRPPVGLIHHSNRGSQYCTHDYRAIQERFGLKTSMPRKGNRYDNTSMKNL  51

2) CP0189 in NC_004851


> GQ338312|17|G16|255348343|ACU09485.1|Escherichia_coli_71074|+|8231..8386|-|-|hypothetical 
protein
Length=51

 Score = 72.1 bits (254),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 37/50 (74%), Positives = 45/50 (90%), Gaps = 0/50 (0%)

Query  6   QRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESF  55
           QRPP GLIHHS+RGSQYC+ DYR IQE+FGLKTSM+RKGN YDN++M ++
Sbjct  2   QRPPVGLIHHSNRGSQYCTHDYRAIQERFGLKTSMPRKGNRYDNTSMKNL  51

3) SSON_P152 in NC_007385


> GQ338312|17|G16|255348343|ACU09485.1|Escherichia_coli_71074|+|8231..8386|-|-|hypothetical 
protein
Length=51

 Score = 72.1 bits (254),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 37/50 (74%), Positives = 45/50 (90%), Gaps = 0/50 (0%)

Query  6   QRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESF  55
           QRPP GLIHHS+RGSQYC+ DYR IQE+FGLKTSM+RKGN YDN++M ++
Sbjct  2   QRPPVGLIHHSNRGSQYCTHDYRAIQERFGLKTSMPRKGNRYDNTSMKNL  51

4) B932_2983 in NC_019396


> GQ338312|17|G16|255348343|ACU09485.1|Escherichia_coli_71074|+|8231..8386|-|-|hypothetical 
protein
Length=51

 Score = 42.4 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 20/41 (49%), Positives = 31/41 (76%), Gaps = 0/41 (0%)

Query  1   MRQPPPGCVHHADRGSQYCSEAYRQLLSAHGFLVSMSRKGK  41
           M++PP G +HH++RGSQYC++ YR +    G+  SM+RKG+
Sbjct  1   MQRPPVGLIHHSNRGSQYCTHDYRAIQERFGLKTSMPRKGN  41

5) B932_3076 in NC_019396


> GQ338312|17|G16|255348343|ACU09485.1|Escherichia_coli_71074|+|8231..8386|-|-|hypothetical 
protein
Length=51

 Score = 42.4 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 20/41 (49%), Positives = 31/41 (76%), Gaps = 0/41 (0%)

Query  1   MRQPPPGCVHHADRGSQYCSEAYRQLLSAHGFLVSMSRKGK  41
           M++PP G +HH++RGSQYC++ YR +    G+  SM+RKG+
Sbjct  1   MQRPPVGLIHHSNRGSQYCTHDYRAIQERFGLKTSMPRKGN  41

6) B5T_02079 in NC_018691


> GQ338312|17|G16|255348343|ACU09485.1|Escherichia_coli_71074|+|8231..8386|-|-|hypothetical 
protein
Length=51

 Score = 29.0 bits (90),  Expect = 0.16, Method: Compositional matrix adjust.
 Identities = 16/39 (42%), Positives = 24/39 (62%), Gaps = 0/39 (0%)

Query  1   MIHHSDRGSQYLSIRYTERMADEGIDASVGTTGDSYDNA  39
           +IHHS+RGSQY +  Y       G+ +S+   G+ YDN+
Sbjct  8   LIHHSNRGSQYCTHDYRAIQERFGLKTSMPRKGNRYDNT  46