Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
reverse transcriptase |
NC_018028 (Pseudomonas stutzeri CCUG 29243) |
0.0 |
99 |
|
reverse transcriptase |
NC_017986 (Pseudomonas putida ND6) |
8e-178 |
85 |
|
reverse transcriptase |
NC_015733 (Pseudomonas putida S16) |
8e-178 |
85 |
|
reverse transcriptase |
NC_015733 (Pseudomonas putida S16) |
8e-178 |
85 |
|
reverse transcriptase |
NC_015733 (Pseudomonas putida S16) |
1e-169 |
86 |
|
reverse transcriptase |
NC_009434 (Pseudomonas stutzeri A1501) |
8e-149 |
88 |
|
Retron-type reverse transcriptase |
NC_021183 (Clostridium pasteurianum BC1) |
1e-126 |
55 |
|
RNA-directed DNA polymerase |
NC_013216 (Desulfotomaculum acetoxidans DSM 771) |
2e-125 |
56 |
|
RNA-directed DNA polymerase |
NC_016888 (Sulfobacillus acidophilus DSM 10332) |
5e-124 |
59 |
|
RNA-directed DNA polymerase |
NC_015757 (Sulfobacillus acidophilus TPY) |
5e-124 |
59 |
|
reverse transcriptase |
NC_003552 (Methanosarcina acetivorans C2A) |
4e-123 |
55 |
|
reverse transcriptase |
NC_003552 (Methanosarcina acetivorans C2A) |
4e-123 |
55 |
|
reverse transcriptase |
NC_003552 (Methanosarcina acetivorans C2A) |
3e-121 |
55 |
|
RNA-directed DNA polymerase |
NC_021171 (Bacillus sp. 1NLA3E) |
8e-119 |
52 |
|
reverse transcriptasematurase |
NC_003078 (Sinorhizobium meliloti 1021) |
2e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_020560 (Sinorhizobium meliloti 2011) |
2e-118 |
55 |
|
putative reverse transcriptasematurase protein |
NC_017325 (Sinorhizobium meliloti SM11) |
2e-118 |
55 |
|
putative reverse transcriptasematurase protein |
NC_017325 (Sinorhizobium meliloti SM11) |
2e-118 |
55 |
|
putative reverse transcriptasematurase protein |
NC_017326 (Sinorhizobium meliloti SM11) |
2e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_017327 (Sinorhizobium meliloti SM11) |
2e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_017327 (Sinorhizobium meliloti SM11) |
2e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_017327 (Sinorhizobium meliloti SM11) |
2e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019892 (Singulisphaera acidiphila DSM 18658) |
2e-118 |
54 |
|
Retron-type reverse transcriptase |
NC_019892 (Singulisphaera acidiphila DSM 18658) |
2e-118 |
54 |
|
Retron-type reverse transcriptase |
NC_019892 (Singulisphaera acidiphila DSM 18658) |
2e-118 |
54 |
|
Retron-type reverse transcriptase |
NC_019892 (Singulisphaera acidiphila DSM 18658) |
2e-118 |
54 |
|
Retron-type reverse transcriptase |
NC_019892 (Singulisphaera acidiphila DSM 18658) |
2e-118 |
54 |
|
RNA-directed DNA polymerase |
NC_017322 (Sinorhizobium meliloti BL225C) |
3e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_017322 (Sinorhizobium meliloti BL225C) |
3e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_017323 (Sinorhizobium meliloti BL225C) |
3e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_017323 (Sinorhizobium meliloti BL225C) |
3e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_017324 (Sinorhizobium meliloti BL225C) |
3e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019845 (Sinorhizobium meliloti GR4) |
3e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019845 (Sinorhizobium meliloti GR4) |
3e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019845 (Sinorhizobium meliloti GR4) |
3e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019845 (Sinorhizobium meliloti GR4) |
3e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019847 (Sinorhizobium meliloti GR4) |
3e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019848 (Sinorhizobium meliloti GR4) |
3e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019848 (Sinorhizobium meliloti GR4) |
3e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019848 (Sinorhizobium meliloti GR4) |
3e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019848 (Sinorhizobium meliloti GR4) |
3e-118 |
55 |
|
Retron-type reverse transcriptase |
NC_019848 (Sinorhizobium meliloti GR4) |
3e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_018701 (Sinorhizobium meliloti Rm41) |
3e-118 |
55 |
|
Reverse transcriptase, maturase |
NC_003037 (Sinorhizobium meliloti 1021) |
5e-118 |
55 |
|
reverse transcriptasematurase of intron RmInt1 protein |
NC_003078 (Sinorhizobium meliloti 1021) |
5e-118 |
55 |
|
Reverse transcriptase,maturase |
NC_020527 (Sinorhizobium meliloti 2011) |
5e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_020560 (Sinorhizobium meliloti 2011) |
5e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_013792 (Bacillus pseudofirmus OF4) |
5e-118 |
52 |
|
RNA-directed DNA polymerase |
NC_011060 (Pelodictyon phaeoclathratiforme BU-1) |
8e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_011060 (Pelodictyon phaeoclathratiforme BU-1) |
8e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_011060 (Pelodictyon phaeoclathratiforme BU-1) |
8e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_011060 (Pelodictyon phaeoclathratiforme BU-1) |
8e-118 |
55 |
|
RNA-directed DNA polymerase |
NC_011060 (Pelodictyon phaeoclathratiforme BU-1) |
8e-118 |
55 |
|
putative RNA-directed DNA polymerase |
NC_014311 (Ralstonia solanacearum PSI07) |
3e-117 |
54 |
|
reverse transcriptase/maturase |
NC_012586 (Sinorhizobium fredii NGR234) |
7e-117 |
55 |
|
RNA-directed DNA polymerase |
NC_011059 (Prosthecochloris aestuarii DSM 271) |
8e-117 |
54 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
2e-116 |
53 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
2e-116 |
53 |
|
Retron-type reverse transcriptase |
NC_019697 (Chamaesiphon minutus PCC 6605) |
3e-116 |
53 |
|
Retron-type reverse transcriptase |
NC_019697 (Chamaesiphon minutus PCC 6605) |
3e-116 |
53 |
|
Retron-type reverse transcriptase |
NC_019697 (Chamaesiphon minutus PCC 6605) |
3e-116 |
53 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
4e-116 |
53 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
5e-116 |
52 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
8e-116 |
53 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
8e-116 |
53 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
2e-115 |
52 |
|
RNA-directed DNA polymerase (Reverse transcriptase) |
NC_008688 (Paracoccus denitrificans PD1222) |
3e-115 |
53 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
5e-115 |
52 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
2e-114 |
52 |
|
hypothetical protein |
NC_005126 (Photorhabdus luminescens TTO1) |
3e-114 |
55 |
|
RNA-directed DNA polymerase |
NC_009620 (Sinorhizobium medicae WSM419) |
2e-113 |
55 |
|
RNA-directed DNA polymerase |
NC_009621 (Sinorhizobium medicae WSM419) |
2e-113 |
55 |
|
RNA-directed DNA polymerase |
NC_009621 (Sinorhizobium medicae WSM419) |
2e-113 |
55 |
|
RNA-directed DNA polymerase |
NC_009636 (Sinorhizobium medicae WSM419) |
2e-113 |
55 |
|
reverse transcriptase |
NC_009494 (Legionella pneumophila Corby) |
7e-112 |
51 |
|
Retron-type reverse transcriptase |
NC_019848 (Sinorhizobium meliloti GR4) |
2e-111 |
56 |
|
Retron-type reverse transcriptase |
NC_019848 (Sinorhizobium meliloti GR4) |
2e-111 |
56 |
|
Retron-type reverse transcriptase |
NC_019848 (Sinorhizobium meliloti GR4) |
2e-111 |
56 |
|
Retron-type reverse transcriptase |
NC_019848 (Sinorhizobium meliloti GR4) |
2e-111 |
56 |
|
Retron-type reverse transcriptase |
NC_019849 (Sinorhizobium meliloti GR4) |
2e-111 |
56 |
|
Retron-type reverse transcriptase |
NC_019849 (Sinorhizobium meliloti GR4) |
2e-111 |
56 |
|
Retron-type reverse transcriptase |
NC_019849 (Sinorhizobium meliloti GR4) |
2e-111 |
56 |
|
RNA-directed DNA polymerase |
NC_011059 (Prosthecochloris aestuarii DSM 271) |
2e-111 |
55 |
|
hypothetical protein |
NC_017249 (Bradyrhizobium japonicum USDA 6) |
1e-110 |
53 |
|
Reverse transcriptase/maturase protein |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
9e-111 |
54 |
|
maturase; reverse transcriptase |
NC_004463 (Bradyrhizobium japonicum USDA 110) |
5e-110 |
53 |
|
RNA-directed DNA polymerase |
NC_009337 (Chlorobium phaeovibrioides DSM 265) |
6e-110 |
56 |
|
reverse transcriptase |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
7e-110 |
55 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
1e-109 |
53 |
|
reverse transcriptase |
NC_004663 (Bacteroides thetaiotaomicron VPI-5482) |
2e-109 |
50 |
|
RNA-directed DNA polymerase |
NC_008639 (Chlorobium phaeobacteroides DSM 266) |
5e-109 |
53 |
|
Retron-type reverse transcriptase |
NC_017934 (Mesotoga prima MesG1.Ag.4.2) |
6e-109 |
53 |
|
Putative reverse transcriptase |
NC_021084 (Wolbachia endosymbiont of Drosophila simulans wNo) |
3e-108 |
48 |
|
RNA-directed DNA polymerase |
NC_015848 (Mycobacterium canettii CIPT 140010059) |
1e-107 |
52 |
|
RNA-directed DNA polymerase (Reverse transcriptase) |
NC_021177 (Streptomyces fulvissimus DSM 40593) |
7e-107 |
53 |
|
RNA-directed DNA polymerase |
NC_008576 (Magnetococcus marinus MC-1) |
2e-106 |
50 |
|
RNA-directed DNA polymerase |
NC_008576 (Magnetococcus marinus MC-1) |
2e-106 |
50 |
|
RNA-directed DNA polymerase |
NC_013223 (Desulfohalobium retbaense DSM 5692) |
4e-106 |
51 |
|
Putative reverse transcriptase |
NC_010981 (Wolbachia endosymbiont wPip) |
1e-104 |
49 |
|
Putative reverse transcriptase |
NC_010981 (Wolbachia endosymbiont wPip) |
1e-104 |
49 |
|
putative reverse transcriptase-Group II intron |
NC_017626 (Escherichia coli 042) |
3e-104 |
50 |
|
putative reverse transcriptase |
NC_011751 (Escherichia coli UMN026) |
3e-104 |
50 |
|
RNA-directed DNA polymerase |
NC_015914 (Cyclobacterium marinum DSM 745) |
7e-104 |
47 |
|
RNA-directed DNA polymerase |
NC_015914 (Cyclobacterium marinum DSM 745) |
1e-103 |
47 |
|
RNA-directed DNA polymerase |
NC_015914 (Cyclobacterium marinum DSM 745) |
2e-103 |
47 |
|
reverse transcriptase |
NC_016112 (Methylomicrobium alcaliphilum 20Z) |
4e-103 |
52 |
|
reverse transcriptase |
NC_014041 (Zunongwangia profunda SMA-87) |
1e-101 |
47 |
|
RNA-directed DNA polymerase |
NC_018140 (Legionella pneumophila HL06041035) |
2e-101 |
53 |
|
reverse transcriptase |
NC_018140 (Legionella pneumophila HL06041035) |
2e-101 |
53 |
|
reverse transcriptase |
NC_018140 (Legionella pneumophila HL06041035) |
2e-101 |
53 |
|
RNA-directed DNA polymerase |
NC_009633 (Alkaliphilus metalliredigens QYMF) |
4e-100 |
46 |
|
retron-type reverse transcriptase |
NC_018721 (Psychroflexus torquis ATCC 700755) |
9e-100 |
47 |
|
retron-type reverse transcriptase |
NC_018721 (Psychroflexus torquis ATCC 700755) |
9e-100 |
47 |
|
putative reverse transcriptase, fragment |
NC_007385 (Shigella sonnei Ss046) |
2e-99 |
58 |
|
RNA-directed DNA polymerase |
NC_015597 (Sinorhizobium meliloti AK83) |
4e-99 |
59 |
|
group 2 retron-type reverse transcriptase |
NC_018721 (Psychroflexus torquis ATCC 700755) |
4e-99 |
47 |
|
Retron-type reverse transcriptase |
NC_016627 (Clostridium clariflavum DSM 19732) |
1e-98 |
46 |
|
reverse transcriptase/maturase |
NC_020061 (Rhizobium tropici CIAT 899) |
2e-98 |
51 |
|
retron-type reverse transcriptase |
NC_018721 (Psychroflexus torquis ATCC 700755) |
2e-98 |
46 |
|
RNA-directed DNA polymerase |
NC_018509 (Bacillus thuringiensis HD-789) |
7e-98 |
49 |
|
RNA-directed DNA polymerase |
NC_015656 (Frankia sp. 4085684) |
2e-96 |
47 |
|
RNA-directed DNA polymerase |
NC_015656 (Frankia sp. 4085684) |
2e-96 |
47 |
|
RNA-directed DNA polymerase |
NC_015656 (Frankia sp. 4085684) |
2e-96 |
47 |
|
RNA-directed DNA polymerase |
NC_015656 (Frankia sp. 4085684) |
3e-96 |
49 |
|
RNA-directed DNA polymerase |
NC_009921 (Frankia sp. EAN1.pec) |
8e-95 |
50 |
|
RNA-directed DNA polymerase |
NC_009921 (Frankia sp. EAN1.pec) |
8e-95 |
50 |
|
RNA-directed DNA polymerase |
NC_017455 (Halanaerobium praevalens DSM 2228) |
7e-94 |
49 |
|
Retron-type reverse transcriptase |
NC_021182 (Clostridium pasteurianum BC1) |
1e-93 |
45 |
|
retron-type reverse transcriptase |
NC_018721 (Psychroflexus torquis ATCC 700755) |
2e-92 |
46 |
|
RNA-directed DNA polymerase (reverse transcriptase) |
NC_014934 (Cellulophaga algicola DSM 14237) |
1e-91 |
46 |
|
RNA-directed DNA polymerase (reverse transcriptase) |
NC_014934 (Cellulophaga algicola DSM 14237) |
1e-91 |
46 |
|
RNA-directed DNA polymerase (reverse transcriptase) |
NC_014934 (Cellulophaga algicola DSM 14237) |
1e-91 |
46 |
|
RNA-directed DNA polymerase (reverse transcriptase) |
NC_014934 (Cellulophaga algicola DSM 14237) |
4e-91 |
45 |
|
RNA-directed DNA polymerase (reverse transcriptase) |
NC_014934 (Cellulophaga algicola DSM 14237) |
4e-91 |
45 |
|
RNA-directed DNA polymerase |
NC_009438 (Shewanella putrefaciens CN-32) |
3e-90 |
51 |
|
putative maturase |
NC_010995 (Cellvibrio japonicus Ueda107) |
3e-89 |
47 |
|
Retron-type reverse transcriptase |
NC_016627 (Clostridium clariflavum DSM 19732) |
3e-89 |
46 |
|
Reverse transcriptase |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
3e-89 |
56 |
|
putative reverse transcriptase |
NC_011745 (Escherichia coli ED1a) |
2e-88 |
44 |
|
putative reverse transcriptase |
NC_011745 (Escherichia coli ED1a) |
2e-88 |
44 |
|
reverse transcriptase |
NC_008253 (Escherichia coli 536) |
3e-87 |
43 |
|
RNA-directed DNA polymerase |
NC_007777 (Frankia sp. CcI3) |
1e-85 |
51 |
|
RNA-directed DNA polymerase |
NC_009633 (Alkaliphilus metalliredigens QYMF) |
5e-84 |
46 |
|
RNA-directed DNA polymerase |
NC_010468 (Escherichia coli ATCC 8739) |
4e-83 |
48 |
|
RNA-directed DNA polymerase |
NC_008576 (Magnetococcus marinus MC-1) |
2e-82 |
49 |
|
RNA-directed DNA polymerase (reverse transcriptase) |
NC_014655 (Leadbetterella byssophila DSM 17132) |
3e-82 |
48 |
|
RNA-directed DNA polymerase |
NC_014655 (Leadbetterella byssophila DSM 17132) |
3e-82 |
48 |
|
RNA-directed DNA polymerase (reverse transcriptase) |
NC_014655 (Leadbetterella byssophila DSM 17132) |
3e-82 |
48 |
|
reverse transcriptase |
NC_010660 (Shigella boydii CDC 3083-94) |
6e-82 |
43 |
|
RNA-directed DNA polymerase |
NC_015276 (Marinomonas mediterranea MMB-1) |
3e-80 |
43 |
|
RNA-directed DNA polymerase |
NC_014041 (Zunongwangia profunda SMA-87) |
2e-79 |
44 |
|
putative reverse transcriptase |
NC_017319 (Shigella flexneri 2002017) |
2e-79 |
43 |
|
putative reverse transcriptase |
NC_007607 (Shigella dysenteriae Sd197) |
3e-79 |
43 |
|
RNA-directed DNA polymerase |
NC_009142 (Saccharopolyspora erythraea NRRL 2338) |
6e-79 |
52 |
|
Retron-type reverse transcriptase |
NC_021047 (Clostridium saccharolyticum K10) |
2e-76 |
45 |
|
reverse transcriptase |
NC_014041 (Zunongwangia profunda SMA-87) |
4e-73 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='EF611303' AND ph.id_pai_orf='17' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc