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Homologs of cag23 gene of AY330637

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) cag23
( YP_005793168.1 )

cag pathogenicity island protein E

NC_017382
(Helicobacter pylori 51)

0.0

2) cagE
( YP_002266131.1 )

cag pathogenicity island protein E

NC_011333
(Helicobacter pylori G27)

0.0

3) cagE
( YP_005779049.1 )

DNA transfer protein

NC_017368
(Helicobacter pylori F16)

0.0

4) HPPC_02695
( YP_003926827.1 )

cag pathogenicity island protein E

NC_014555
(Helicobacter pylori PeCan4)

0.0

5) cagE
( YP_006338469.1 )

cag pathogenicity island protein E VirB4-like protein

NC_017926
(Helicobacter pylori XZ274)

0.0

6) HPKB_0799
( YP_005762307.1 )

cag pathogenicity island protein E

NC_017354
(Helicobacter pylori 52)

0.0

7) cag23
( YP_005783514.1 )

CAG pathogenicity island protein

NC_017374
(Helicobacter pylori 2017)

0.0

8) picB
( YP_005791358.1 )

cag pathogenicity island protein 23

NC_017381
(Helicobacter pylori 2018)

0.0

9) cag23
( YP_005765049.1 )

cag pathogenicity island protein

NC_017357
(Helicobacter pylori 908)

0.0

10) cagE
( NP_223210.1 )

DNA transfer protein

NC_000921
(Helicobacter pylori J99)

0.0

11) HPELS_04050
( YP_005424930.1 )

cag pathogenicity island protein E VirB4-like protein

NC_017063
(Helicobacter pylori ELS37)

0.0

12) cagE
( YP_002301185.1 )

cag pathogenicity island protein E VirB4-like protein

NC_011498
(Helicobacter pylori P12)

0.0

13) HMPREF4655_21058
( YP_005770145.1 )

CAG pathogenicity island protein 23

NC_017360
(Helicobacter pylori 35A)

0.0

14) HPB14_04150
( YP_006219543.1 )

cag pathogenicity island protein E VirB4-like protein

NC_017733
(Helicobacter pylori HUP-B14)

0.0

15) HPLT_02685
( YP_005772680.1 )

cag pathogenicity island protein E VirB4-like protein

NC_017362
(Helicobacter pylori Lithuania75)

0.0

16) cagE
( YP_007536676.1 )

DNA transfer protein

NC_020508
(Helicobacter pylori OK113)

0.0

17) K750_04055
( YP_007982167.1 )

transporter

NC_021217
(Helicobacter pylori UM037)

0.0

18) cagE
( YP_005785440.1 )

cag pathogenicity island protein E VirB4 family protein

NC_017375
(Helicobacter pylori 83)

0.0

19) cagE
( YP_005777285.1 )

DNA transfer protein

NC_017367
(Helicobacter pylori F57)

0.0

20) HPPC18_02600
( YP_006228786.1 )

cag pathogenicity island protein CagE

NC_017742
(Helicobacter pylori PeCan18)

0.0

21) HPPN135_02685
( YP_005789754.1 )

cag pathogenicity island protein E

NC_017379
(Helicobacter pylori Puno135)

0.0

22) HPCU_02975
( YP_005766669.1 )

cag pathogenicity island protein (cagE, cag23)

NC_017358
(Helicobacter pylori Cuz20)

0.0

23) HPSNT_02800
( YP_005786700.1 )

cag pathogenicity island protein E

NC_017376
(Helicobacter pylori Santal49)

0.0

24) HPSH169_02795
( YP_006225751.1 )

cag pathogenicity island protein CagE

NC_017740
(Helicobacter pylori Shi169)

0.0

25) HPSH417_02600
( YP_006224167.1 )

cag pathogenicity island protein CagE

NC_017739
(Helicobacter pylori Shi417)

0.0

26) K747_06790
( YP_007979545.1 )

transporter

NC_021215
(Helicobacter pylori UM032)

0.0

27) K748_08030
( YP_008337460.1 )

transporter

NC_021882
(Helicobacter pylori UM298)

0.0

28) K749_01425
( YP_007980082.1 )

transporter

NC_021216
(Helicobacter pylori UM299)

0.0

29) HP0544
( NP_207340.1 )

cag pathogenicity island protein (cag23)

NC_000915
(Helicobacter pylori 26695)

0.0

30) C694_02805
( YP_006934467.1 )

cag pathogenicity island protein (cag23)

NC_018939
(Helicobacter pylori 26695)

0.0

31) cagE
( YP_003728720.1 )

cag pathogenicity island protein E

NC_014256
(Helicobacter pylori B8)

0.0

32) cagE
( YP_005775744.1 )

DNA transfer protein

NC_017366
(Helicobacter pylori F32)

0.0

33) HPGAM_02770
( YP_005780277.1 )

DNA transfer protein

NC_017371
(Helicobacter pylori Gambia94/24)

0.0

34) C695_02805
( YP_006893032.1 )

cag pathogenicity island protein (cag23)

NC_018937
(Helicobacter pylori Rif1)

0.0

35) C730_02805
( YP_006936073.1 )

cag pathogenicity island protein (cag23)

NC_018938
(Helicobacter pylori Rif2)

0.0

36) cagE
( YP_007538422.1 )

DNA transfer protein

NC_020509
(Helicobacter pylori OK310)

0.0

37) HPSJM_02570
( YP_003928427.1 )

cag pathogenicity island protein E

NC_014560
(Helicobacter pylori SJM180)

0.0

38) K751_03350
( YP_007983650.1 )

transporter

NC_021218
(Helicobacter pylori UM066)

0.0

39) HPIN_04165
( YP_005782144.1 )

cag pathogenicity island protein E VirB4-like protein

NC_017372
(Helicobacter pylori India7)

0.0

40) HPSH112_04315
( YP_006227557.1 )

cag pathogenicity island protein CagE

NC_017741
(Helicobacter pylori Shi112)

0.0

41) cagE
( YP_005774527.1 )

cag pathogenicity island protein

NC_017365
(Helicobacter pylori F30)

0.0

42) HPSH_04165
( YP_001910298.1 )

cag pathogenicity island protein CagE

NC_010698
(Helicobacter pylori Shi470)

0.0

43) HPV225_0548
( YP_005763479.1 )

type IV secretion/conjugal transfer ATPase

NC_017355
(Helicobacter pylori v225d)

0.0

• Sequence Alignments

1) cag23 in NC_017382


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1551 bits (5887),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 974/983 (99%), Positives = 981/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDKIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKD+IELIEELLSKYHPTRLKEYTKDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLVPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARL PFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIEEY  983
            IQNHSIIDKYQALRQMYQQIEEY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

2) cagE in NC_011333


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1551 bits (5887),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 977/983 (99%), Positives = 981/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLAFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGL FSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQDNNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQ+NNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIEEY  983
            IQNHSIIDKYQALRQMYQQIEEY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

3) cagE in NC_017368


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1550 bits (5884),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 975/983 (99%), Positives = 981/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNQA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDN+A
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

4) HPPC_02695 in NC_014555


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1550 bits (5886),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 976/983 (99%), Positives = 980/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTVVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVT+VLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGL FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIEEY  983
            IQNHSIIDKYQALRQMYQQIEEY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

5) cagE in NC_017926


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1550 bits (5885),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 977/983 (99%), Positives = 981/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIEEY  983
            IQNHSIIDKYQALRQMYQQIEEY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

6) HPKB_0799 in NC_017354


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1549 bits (5880),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 976/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG+IYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSTTFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNS +FSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIEEY  983
            IQNHSIIDKYQALRQMYQQIEEY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

7) cag23 in NC_017374


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1548 bits (5878),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 973/983 (99%), Positives = 981/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGINPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQFQKIEELKADMQKG+NPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGKEENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDG++ENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTDATMEQKQTAISVVKELVKNLATKSDEKDENGNSVSFSLADSN  720
            TDTGLNPFAWAACVQKT+ATMEQKQTAISVVKELVKNLATKSDEKDENGNS+SFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

8) picB in NC_017381


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1548 bits (5878),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 973/983 (99%), Positives = 981/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGINPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQFQKIEELKADMQKG+NPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGKEENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDG++ENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTDATMEQKQTAISVVKELVKNLATKSDEKDENGNSVSFSLADSN  720
            TDTGLNPFAWAACVQKT+ATMEQKQTAISVVKELVKNLATKSDEKDENGNS+SFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

9) cag23 in NC_017357


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1548 bits (5878),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 973/983 (99%), Positives = 981/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGINPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQFQKIEELKADMQKG+NPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGKEENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDG++ENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTDATMEQKQTAISVVKELVKNLATKSDEKDENGNSVSFSLADSN  720
            TDTGLNPFAWAACVQKT+ATMEQKQTAISVVKELVKNLATKSDEKDENGNS+SFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

10) cagE in NC_000921


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1548 bits (5878),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 973/983 (99%), Positives = 981/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGKEDNNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDG+++NNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANISKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPAN+SKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

11) HPELS_04050 in NC_017063


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1547 bits (5873),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 978/983 (99%), Positives = 980/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMLAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFM AYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

12) cagE in NC_011498


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1547 bits (5873),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 977/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

13) HMPREF4655_21058 in NC_017360


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1546 bits (5869),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 973/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

14) HPB14_04150 in NC_017733


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1546 bits (5870),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 974/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+LIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPIRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHP RLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQDNNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQ+NNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSVSFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNS+SFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

15) HPLT_02685 in NC_017362


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1546 bits (5869),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 974/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG+IYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGNMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITG+MNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

16) cagE in NC_020508


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1546 bits (5871),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 972/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKSVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FK+VKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGL FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDRQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKD+QKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

17) K750_04055 in NC_021217


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1546 bits (5868),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 973/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YNLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG+IYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQDNNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQ+NNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSLSFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNS+SFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIEEY  983
            IQNHSIIDKYQALRQMYQQIEEY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

18) cagE in NC_017375


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1545 bits (5867),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 972/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+LIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATIEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQK+NAT+EQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

19) cagE in NC_017367


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1545 bits (5864),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 969/983 (99%), Positives = 980/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKTDMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELK+DMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADNFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFAD+FEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDRQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKD+QKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATIEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQK+NAT+EQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNQA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDN+A
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

20) HPPC18_02600 in NC_017742


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1545 bits (5864),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 973/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

21) HPPN135_02685 in NC_017379


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1545 bits (5864),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 971/983 (99%), Positives = 977/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivialvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVI LVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQDHSIIDKYQALRQMYQQIKEY  983
            IQ+HSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

22) HPCU_02975 in NC_017358


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1544 bits (5863),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 972/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

23) HPSH169_02795 in NC_017740


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1544 bits (5861),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 970/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANSYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLAN+YECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  VQNHSIIDKYQALRQMYQQIKEY  983
            +QNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

24) HPSH417_02600 in NC_017739


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1544 bits (5862),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 970/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivavvivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVA+VIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  VQNHSIIDKYQALRQMYQQIKEY  983
            +QNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

25) HPSNT_02800 in NC_017376


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1544 bits (5860),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 971/982 (99%), Positives = 978/982 (99%), Gaps = 0/982 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YNLAFSNDFMQAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y L FSNDFM+AYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG+IYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSTIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFSGNQDNNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSF GNQ+NNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIEE  982
            IQNHSIIDKYQALRQMYQQIEE
Sbjct  961  IQNHSIIDKYQALRQMYQQIEE  982

26) K747_06790 in NC_021215


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1544 bits (5860),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 968/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivvvlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIV+VLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLVFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L+FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSTTFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNS +FSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNQA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDN+A
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQK  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQ+
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

27) K748_08030 in NC_021882


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1544 bits (5860),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 968/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivvvlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIV+VLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLVFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L+FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSTTFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNS +FSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNQA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDN+A
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQK  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQ+
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

28) K749_01425 in NC_021216


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1544 bits (5860),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 968/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivvvlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIV+VLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLVFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L+FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSTTFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNS +FSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNQA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDN+A
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQK  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQ+
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

29) C694_02805 in NC_018939


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1543 bits (5857),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 971/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFKKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQF+KIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+LIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPIRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHP RLKEYTKDG+IYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

30) HP0544 in NC_000915


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1543 bits (5857),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 971/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFKKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQF+KIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+LIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPIRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHP RLKEYTKDG+IYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

31) cagE in NC_014256


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1543 bits (5857),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 972/981 (99%), Positives = 977/981 (99%), Gaps = 0/981 (0%)

Query  1    MASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIY  60
            +ASKQADEQKKL+IEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIY
Sbjct  3    VASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIY  62

Query  61   SSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFLFK  120
            SSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFLFK
Sbjct  63   SSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFLFK  122

Query  121  GVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYS  180
            GVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYS
Sbjct  123  GVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYS  182

Query  181  LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRDYG  240
            LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRDYG
Sbjct  183  LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRDYG  242

Query  241  LIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR  300
            LIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR
Sbjct  243  LIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR  302

Query  301  AKLENFKDRIELIEELLSKYHPIRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRKDL  360
            AKLENFKDRIELIEELLSKYHP RLKEYTKDG+IYSKQCEFYNFLVGMNEAPFICNRKDL
Sbjct  303  AKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRKDL  362

Query  361  YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSEFI  420
            YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSEFI
Sbjct  363  YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSEFI  422

Query  421  FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL  480
            FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL
Sbjct  423  FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL  482

Query  481  FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD  540
            FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD
Sbjct  483  FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD  542

Query  541  FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG  600
            FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG
Sbjct  543  FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG  602

Query  601  KTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD  660
            KTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD
Sbjct  603  KTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD  662

Query  661  TGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL  720
            TGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL
Sbjct  663  TGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL  722

Query  721  AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD  780
            AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD
Sbjct  723  AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD  782

Query  781  RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVA  840
            RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVA
Sbjct  783  RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVA  842

Query  841  YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA  900
            YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA
Sbjct  843  YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA  902

Query  901  NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ  960
            NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ
Sbjct  903  NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ  962

Query  961  NHSIIDKYQALRQMYQQIEEY  981
            NHSIIDKYQALRQMYQQIEEY
Sbjct  963  NHSIIDKYQALRQMYQQIEEY  983

32) cagE in NC_017366


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1543 bits (5858),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 970/983 (99%), Positives = 977/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSTIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGNMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITG+MNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  IDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
             DRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

33) HPGAM_02770 in NC_017371


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1543 bits (5859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 970/983 (99%), Positives = 979/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGINPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQFQKIEELKADMQKG+NPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDG+IYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGREENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDG +ENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYHFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAY+FPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAAYVQKTDATMEQKQTAISVVKELVKNLATKSDEKDENGNSVSFSLADSN  720
            TDTGLNPFAWAA VQKT+ATMEQKQTAISVVKELVKNLATKSDEKDENGNS+SFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

34) C695_02805 in NC_018937


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1543 bits (5857),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 971/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFKKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQF+KIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+LIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPIRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHP RLKEYTKDG+IYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

35) C730_02805 in NC_018938


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1543 bits (5857),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 971/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFKKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQF+KIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+LIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPIRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHP RLKEYTKDG+IYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

36) cagE in NC_020509


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1542 bits (5854),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 966/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLVIEQEVQKRQFQKIEELKTDMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKL+IEQEVQKRQFQKIEELK+DMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLTFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDKIELIEELLSKYHPTRLKEYTKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKD+IELIEELLSKYHPTRLKEYTKDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSTTFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNS +FSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGNMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNQA  780
            TLAAAVTNLITG+MNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDN+A
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

37) HPSJM_02570 in NC_014560


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1542 bits (5856),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 974/983 (99%), Positives = 980/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYElvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYE VLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+LIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQDNNAWGNSVITLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQ+NNAWGNSV+TLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720
            TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLSDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYL+DPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNYSIIDKYQALRQMYQQIEEY  983
            IQN SIIDKYQALRQMYQQIEEY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

38) K751_03350 in NC_021218


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1542 bits (5853),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 968/983 (99%), Positives = 977/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVVDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIV+DETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSTTFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNS +FSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNQA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDN+A
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIKEY  983
            IQNHSIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

39) HPIN_04165 in NC_017372


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1540 bits (5848),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 969/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            YGLIFSNDFMRAYNEKQKRESFYDISF+LTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDCE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALD E
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKIKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEK+KQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNEENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGN+ENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQF  NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKSNATMEQKQTAISVVKELVKNLATKSDEKDENGNSLSFSLADSN  720
            TDTGLNPFAWAACVQK+NATMEQKQTAISVVKELVKNLATKSDEKDENGNS+SFSLADSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNHSIIDKYQALRQMYQQIEEY  983
            IQNHSIIDKYQALRQMYQQIEEY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

40) HPSH112_04315 in NC_017741


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1540 bits (5847),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 968/983 (99%), Positives = 978/983 (99%), Gaps = 0/983 (0%)

Query  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60
            MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF
Sbjct  1    MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETF  60

Query  61   IYSSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFL  120
            IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL
Sbjct  61   IYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFL  120

Query  121  FKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANSYECFLDDGVILTNN  180
            FKGVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLAN+YECFLDDGVILTNN
Sbjct  121  FKGVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNN  180

Query  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD  240
            YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRD
Sbjct  181  YSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD  240

Query  241  YSLAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300
            Y+L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI
Sbjct  241  YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRI  300

Query  301  IRAKLENFKDKIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRK  360
            IRAKLENFKD+IELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRK
Sbjct  301  IRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRK  360

Query  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSE  420
            DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSE
Sbjct  361  DLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSE  420

Query  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480
            FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
Sbjct  421  FIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL  480

Query  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540
            VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF
Sbjct  481  VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNF  540

Query  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600
            ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG
Sbjct  541  ADFIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTG  600

Query  601  SGKTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660
            SGKTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG
Sbjct  601  SGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELG  660

Query  661  TDTGLNPFAWAACVQKTNTTMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLTDSN  720
            TDTGLNPFAWAACVQKTN+TMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSL+DSN
Sbjct  661  TDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN  720

Query  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780
            TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA
Sbjct  721  TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKA  780

Query  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840
            TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK
Sbjct  781  TDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPK  840

Query  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900
            VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR
Sbjct  841  VAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQR  900

Query  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960
            LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
Sbjct  901  LANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI  960

Query  961  IQNRSIIDKYQALRQMYQQIKEY  983
            IQN+SIIDKYQALRQMYQQI EY
Sbjct  961  IQNHSIIDKYQALRQMYQQIEEY  983

41) cagE in NC_017365


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1538 bits (5837),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 967/981 (99%), Positives = 976/981 (99%), Gaps = 0/981 (0%)

Query  1    MASKQADEQKKLIIEQEVQKRQFQKIEELKTDMQKGVNPFFKVLFDGGNRLFGFPETFIY  60
            +ASKQADEQKKLIIEQEVQKRQFQKIEELK+DMQKGVNPFFKVLFDGGNRLFGFPETFIY
Sbjct  3    VASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIY  62

Query  61   SSIFILFVTIVLSVILFQAYEPilivaivivlvalGFKKDYRLYQRMERAMKFKKPFLFK  120
            SSIFILFVTIVLSVILFQAYEP+LIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFLFK
Sbjct  63   SSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFLFK  122

Query  121  GVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYS  180
            GVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYS
Sbjct  123  GVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYS  182

Query  181  LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRDYS  240
            LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRDY+
Sbjct  183  LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRDYG  242

Query  241  LAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR  300
            L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR
Sbjct  243  LIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR  302

Query  301  AKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRKDL  360
            AKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRKDL
Sbjct  303  AKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRKDL  362

Query  361  YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSEFI  420
            YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSEFI
Sbjct  363  YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSEFI  422

Query  421  FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL  480
            FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL
Sbjct  423  FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL  482

Query  481  FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD  540
            FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD
Sbjct  483  FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD  542

Query  541  FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG  600
            FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG
Sbjct  543  FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG  602

Query  601  KTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD  660
            KTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD
Sbjct  603  KTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD  662

Query  661  TGLNPFAWAACVQKTNATIEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL  720
            TGLNPFAWAACVQKTNAT+EQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL
Sbjct  663  TGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL  722

Query  721  AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD  780
            AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD
Sbjct  723  AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD  782

Query  781  RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVA  840
            RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVA
Sbjct  783  RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVA  842

Query  841  YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA  900
            YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA
Sbjct  843  YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA  902

Query  901  NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ  960
            NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ
Sbjct  903  NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ  962

Query  961  NHSIIDKYQALRQMYQQIKEY  981
            NHSIIDKYQALRQMYQQI EY
Sbjct  963  NHSIIDKYQALRQMYQQIEEY  983

42) HPSH_04165 in NC_010698


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1537 bits (5835),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 968/981 (99%), Positives = 975/981 (99%), Gaps = 0/981 (0%)

Query  1    MASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIY  60
            +ASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIY
Sbjct  3    VASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIY  62

Query  61   SSIFILFVTIVLSVILFQAYEPvlivaivialvalGFKKDYRLYQRMERAMKFKKPFLFK  120
            SSIFILFVTIVLSVILFQAYEPVLIVAIVI LVALGFKKDYRLYQRMERAMKFKKPFLFK
Sbjct  63   SSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFLFK  122

Query  121  GVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYS  180
            GVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYS
Sbjct  123  GVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYS  182

Query  181  LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRDYS  240
            LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRDY+
Sbjct  183  LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRDYG  242

Query  241  LAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR  300
            L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR
Sbjct  243  LIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR  302

Query  301  AKLENFKDRIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRKDL  360
            AKLENFKDRIELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRKDL
Sbjct  303  AKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRKDL  362

Query  361  YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSEFI  420
            YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSEFI
Sbjct  363  YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSEFI  422

Query  421  FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL  480
            FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL
Sbjct  423  FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL  482

Query  481  FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD  540
            FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD
Sbjct  483  FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD  542

Query  541  FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG  600
            FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG
Sbjct  543  FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG  602

Query  601  KTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD  660
            KTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD
Sbjct  603  KTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD  662

Query  661  TGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL  720
            TGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL
Sbjct  663  TGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL  722

Query  721  AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD  780
            AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD
Sbjct  723  AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD  782

Query  781  RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVA  840
            RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVA
Sbjct  783  RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVA  842

Query  841  YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA  900
            YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA
Sbjct  843  YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA  902

Query  901  NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ  960
            NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ
Sbjct  903  NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ  962

Query  961  NRSIIDKYQALRQMYQQIKEY  981
            N+SIIDKYQALRQMYQQI EY
Sbjct  963  NHSIIDKYQALRQMYQQIEEY  983

43) HPV225_0548 in NC_017355


> AY330637|17|G17|37811803|AAR03878.1|Helicobacter_pylori_Ca52|-|17178..20129|cag23|HP0544|Cag23
Length=983

 Score = 1537 bits (5834),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 967/981 (99%), Positives = 976/981 (99%), Gaps = 0/981 (0%)

Query  1    MASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIY  60
            +ASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIY
Sbjct  3    VASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIY  62

Query  61   SSIFILFVTIVLSVILFQAYEPvlivaivivlvalGFKKDYRLYQRMERAMKFKKPFLFK  120
            SSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFLFK
Sbjct  63   SSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFLFK  122

Query  121  GVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANSYECFLDDGVILTNNYS  180
            GVKNKAFMSIFSMKP+KEMANDIHLNPNREDRLVSAANSYLAN+YECFLDDGVILTNNYS
Sbjct  123  GVKNKAFMSIFSMKPNKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYS  182

Query  181  LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRDYS  240
            LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHT+KKKIVIDETNRDY+
Sbjct  183  LLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRDYG  242

Query  241  LAFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR  300
            L FSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR
Sbjct  243  LIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIR  302

Query  301  AKLENFKDKIELIEELLSKYHPTRLKEYIKDGVVYSKQCEFYNFLVGMNEAPFICNRKDL  360
            AKLENFKD+IELIEELLSKYHPTRLKEY KDG++YSKQCEFYNFLVGMNEAPFICNRKDL
Sbjct  303  AKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRKDL  362

Query  361  YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSEFI  420
            YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFS IEISEYAPKSQSDLFDKINALDSEFI
Sbjct  363  YLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSVIEISEYAPKSQSDLFDKINALDSEFI  422

Query  421  FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL  480
            FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL
Sbjct  423  FMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVL  482

Query  481  FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD  540
            FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD
Sbjct  483  FADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFAD  542

Query  541  FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG  600
            FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG
Sbjct  543  FIAMRAMSFDGNQENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSG  602

Query  601  KTVFMSMTLNAMGQFAHNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD  660
            KTVFMSMTLNAMGQFA NFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD
Sbjct  603  KTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTD  662

Query  661  TGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL  720
            TGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL
Sbjct  663  TGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTL  722

Query  721  AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD  780
            AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD
Sbjct  723  AAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATD  782

Query  781  RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLSDPKVA  840
            RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYL+DPKVA
Sbjct  783  RLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVA  842

Query  841  YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA  900
            YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA
Sbjct  843  YFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLA  902

Query  901  NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ  960
            NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ
Sbjct  903  NVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQ  962

Query  961  NHSIIDKYQALRQMYQQIKEY  981
            NHSIIDKYQALRQMYQQI EY
Sbjct  963  NHSIIDKYQALRQMYQQIEEY  983