Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of tcpS gene of AF325733

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) tcpS in NC_012582


> AF325733|17|G17|13377525|AAK20761.1|Vibrio_cholerae_395|+|22706..23164|tcpS|-|toxin-coregulated 
pilus biosynthesis protein 
S
Length=152

 Score =  181 bits (671),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 135/135 (100%), Positives = 135/135 (100%), Gaps = 0/135 (0%)

Query  18   NVAANEFEKSQEHYKSVTDlknkieilelekkitelSGEIRNARMPKIDKSAPVLSPQPV  77
            NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV
Sbjct  18   NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV  77

Query  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137
            VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ
Sbjct  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137

Query  138  NKIQFFKGNKVIDVN  152
            NKIQFFKGNKVIDVN
Sbjct  138  NKIQFFKGNKVIDVN  152

2) tcpS in NC_009457


> AF325733|17|G17|13377525|AAK20761.1|Vibrio_cholerae_395|+|22706..23164|tcpS|-|toxin-coregulated 
pilus biosynthesis protein 
S
Length=152

 Score =  181 bits (671),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 135/135 (100%), Positives = 135/135 (100%), Gaps = 0/135 (0%)

Query  18   NVAANEFEKSQEHYKSVTDlknkieilelekkitelSGEIRNARMPKIDKSAPVLSPQPV  77
            NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV
Sbjct  18   NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV  77

Query  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137
            VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ
Sbjct  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137

Query  138  NKIQFFKGNKVIDVN  152
            NKIQFFKGNKVIDVN
Sbjct  138  NKIQFFKGNKVIDVN  152

3) O3Y_03880 in NC_016944


> AF325733|17|G17|13377525|AAK20761.1|Vibrio_cholerae_395|+|22706..23164|tcpS|-|toxin-coregulated 
pilus biosynthesis protein 
S
Length=152

 Score =  178 bits (659),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 134/135 (99%), Positives = 134/135 (99%), Gaps = 0/135 (0%)

Query  18   NVAANEFEKSQEHYKSVTDlknkieilelekkitelSGEIRNARMPKIDKSAPVLSPQPV  77
            NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV
Sbjct  18   NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV  77

Query  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137
            VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ
Sbjct  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137

Query  138  NKIQFSKGNKVIDVN  152
            NKIQF KGNKVIDVN
Sbjct  138  NKIQFFKGNKVIDVN  152

4) tcpS in NC_012578


> AF325733|17|G17|13377525|AAK20761.1|Vibrio_cholerae_395|+|22706..23164|tcpS|-|toxin-coregulated 
pilus biosynthesis protein 
S
Length=152

 Score =  178 bits (659),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 134/135 (99%), Positives = 134/135 (99%), Gaps = 0/135 (0%)

Query  18   NVAANEFEKSQEHYKSVTDlknkieilelekkitelSGEIRNARMPKIDKSAPVLSPQPV  77
            NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV
Sbjct  18   NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV  77

Query  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137
            VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ
Sbjct  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137

Query  138  NKIQFSKGNKVIDVN  152
            NKIQF KGNKVIDVN
Sbjct  138  NKIQFFKGNKVIDVN  152

5) VCD_003494 in NC_012668


> AF325733|17|G17|13377525|AAK20761.1|Vibrio_cholerae_395|+|22706..23164|tcpS|-|toxin-coregulated 
pilus biosynthesis protein 
S
Length=152

 Score =  178 bits (659),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 134/135 (99%), Positives = 134/135 (99%), Gaps = 0/135 (0%)

Query  18   NVAANEFEKSQEHYKSVTDlknkieilelekkitelSGEIRNARMPKIDKSAPVLSPQPV  77
            NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV
Sbjct  18   NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV  77

Query  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137
            VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ
Sbjct  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137

Query  138  NKIQFSKGNKVIDVN  152
            NKIQF KGNKVIDVN
Sbjct  138  NKIQFFKGNKVIDVN  152

6) tcpS in NC_016445


> AF325733|17|G17|13377525|AAK20761.1|Vibrio_cholerae_395|+|22706..23164|tcpS|-|toxin-coregulated 
pilus biosynthesis protein 
S
Length=152

 Score =  178 bits (659),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 134/135 (99%), Positives = 134/135 (99%), Gaps = 0/135 (0%)

Query  18   NVAANEFEKSQEHYKSVTDlknkieilelekkitelSGEIRNARMPKIDKSAPVLSPQPV  77
            NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV
Sbjct  18   NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV  77

Query  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137
            VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ
Sbjct  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137

Query  138  NKIQFSKGNKVIDVN  152
            NKIQF KGNKVIDVN
Sbjct  138  NKIQFFKGNKVIDVN  152

7) VC0834 in NC_002505


> AF325733|17|G17|13377525|AAK20761.1|Vibrio_cholerae_395|+|22706..23164|tcpS|-|toxin-coregulated 
pilus biosynthesis protein 
S
Length=152

 Score =  178 bits (659),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 134/135 (99%), Positives = 134/135 (99%), Gaps = 0/135 (0%)

Query  18   NVAANEFEKSQEHYKSVTDlknkieilelekkitelSGEIRNARMPKIDKSAPVLSPQPV  77
            NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV
Sbjct  18   NVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPV  77

Query  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137
            VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ
Sbjct  78   VKSSEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQ  137

Query  138  NKIQFSKGNKVIDVN  152
            NKIQF KGNKVIDVN
Sbjct  138  NKIQFFKGNKVIDVN  152