> NC_016800_R1|16|G16|376287443|YP_005160009.1|Corynebacterium_diphtheriae_BH8|+|14994..16829|traC|CDBH8_0917|DNA
primase traC
Length=611
Score = 313 bits (1175), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 237/528 (45%), Positives = 344/528 (66%), Gaps = 61/528 (11%)
Query 48 GREPTHWRVFVQCQNGKYEWLETCTTKAAADTLVDRLAVIDVYSKEQEHERVAAFVRTHE 107
GREP W V+ Q ++G EWL T+ A+ + RL ID + V + R HE
Sbjct 13 GREPEFWGVYAQREEGLHEWLADFDTQEQAEEVALRLQAIDA------QAEVNKLARVHE 66
Query 108 KQPRHDKDTLAAKTTVADNTVqeqqqqqDVALPSITVSEKIWLDLPYKQKEAAKHAAGNL 167
+Q ++++ + + + +E+ +++PYK+K+ AK L
Sbjct 67 NQHDQEQQQTQQAMAAP----------------AQQSAEREYINVPYKEKNEAK----GL 106
Query 168 ADGNCAISWDKEEKRWYARPGADLEKIKQWLPSHEAKPTN----------LATKKTWLAV 217
+ WD++++ WY +G D + +W +EA +T+ + ++ LAV
Sbjct 107 G-----ARWDRQQQSWYVPAGVDSAPFAKW--KQEAAATEGQQTQQTQQPQPQQREYLAV 159
Query 218 TFEQRHAVKEIGGKPPNGNNAVDWDNAAKCWYANPGADLDKLKPWIATEIMSRQVPALSP 277
+EQR+ K G++ WD+ AK WY P AD L W + ++ + Q PA++P
Sbjct 160 PYEQRNEAKAAGAR---------WDKVAKSWYVGPNADRAALERWKPENV-TEQGPAMTP 209
Query 278 EKEFAETLRSLGCLVS----GEHPIMDAKKHRIEVEGDKKGEKAGFYVAYLDGHPSGYIK 333
EFAE+++S G +V+ G+HPIMD+K HR+ V+G+K G GFYV+ LDGHP+G I
Sbjct 210 REEFAEAMKSAGLFVGKRNDGDHPIMDGKPHRVPVDGGKAGAVDGFYVGHLDGHPAGRII 269
Query 334 NNRTGIELKWKSKGYLLDaeqkaamqaeaaaklaaraeqqqqeqeaVTQRVVKQMDDLVT 393
NN+TG ++ WKSKGY L E++A MQAEAA+KLA RA +Q ++QEA +QRV +QM LV
Sbjct 270 NNKTGTDVTWKSKGYALSDEERAKMQAEAATKLAERAAEQAKQQEATAQRVTNQMSALVP 329
Query 394 VIEPTPYLKAKGITPQAGIYTDSDGQKTYIPAIDSDGKQWTMQYIQEDGTKRFAKGGRKE 453
+ +PTPYL AKG+ P+AG+ TD +GQKT+IPA+DSDGKQWTMQYIQEDGTKRFAK ++KE
Sbjct 330 IEQPTPYLAAKGVQPKAGVMTDQEGQKTFIPAFDSDGKQWTMQYIQEDGTKRFAKNSKKE 389
Query 454 GCFHPigglaaivaapvivigegYATVAQVSQALGYGTVVAFDAGNLEGVAKALHKSFPD 513
GCFHP+GG+ A+ AAP +VI+EGYAT AQ+++A+G +TV +FD+GNLE VAKALH +PD
Sbjct 390 GCFHPVGGMDALAAAPALVIAEGYATAAQLAEAVGHATVASFDSGNLENVAKALHEKYPD 449
Query 514 KPILIAGDDDQSL----PNNPGKTKAQEAARAVDGTAFFPIFAPGEQA 557
KP+++AGDDD+ L NNPG+ KA+ AA+AV+G A+FP+FAP+E++
Sbjct 450 KPVIVAGDDDRHLVMTHGNNPGREKAEAAAQAVGGKAIFPVFAPSENT 497
Score = 33.7 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/31 (71%), Positives = 25/31 (81%), Gaps = 0/31 (0%)
Query 564 TDFNDLATKSALGIEAVERQVHAAVSKAIDN 594
TDFNDLA KS LG E+V RQV AAVSKA ++
Sbjct 558 TDFNDLAQKSELGREGVKRQVVAAVSKAQQD 588 |