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Homologs of VC0833 gene of NC_002505_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) tcpD in NC_012578


> NC_002505_P3|16|G14|15640850|NP_230481.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21614..22450|-|VC0833|toxin 
co-regulated 
pilus biosynthesis protein D
Length=278

 Score =  414 bits (1559),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 278/278 (100%), Positives = 278/278 (100%), Gaps = 0/278 (0%)

Query  1    MVNVIMKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQ  60
            MVNVIMKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQ
Sbjct  1    MVNVIMKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQ  60

Query  61   ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV  120
            ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV
Sbjct  61   ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV  120

Query  121  NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD  180
            NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD
Sbjct  121  NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD  180

Query  181  KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN  240
            KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN
Sbjct  181  KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN  240

Query  241  MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278
            MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278

2) VCD_003495 in NC_012668


> NC_002505_P3|16|G14|15640850|NP_230481.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21614..22450|-|VC0833|toxin 
co-regulated 
pilus biosynthesis protein D
Length=278

 Score =  414 bits (1559),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 278/278 (100%), Positives = 278/278 (100%), Gaps = 0/278 (0%)

Query  1    MVNVIMKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQ  60
            MVNVIMKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQ
Sbjct  1    MVNVIMKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQ  60

Query  61   ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV  120
            ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV
Sbjct  61   ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV  120

Query  121  NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD  180
            NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD
Sbjct  121  NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD  180

Query  181  KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN  240
            KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN
Sbjct  181  KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN  240

Query  241  MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278
            MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278

3) VC0833 in NC_002505


> NC_002505_P3|16|G14|15640850|NP_230481.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21614..22450|-|VC0833|toxin 
co-regulated 
pilus biosynthesis protein D
Length=278

 Score =  414 bits (1559),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 278/278 (100%), Positives = 278/278 (100%), Gaps = 0/278 (0%)

Query  1    MVNVIMKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQ  60
            MVNVIMKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQ
Sbjct  1    MVNVIMKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQ  60

Query  61   ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV  120
            ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV
Sbjct  61   ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV  120

Query  121  NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD  180
            NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD
Sbjct  121  NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD  180

Query  181  KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN  240
            KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN
Sbjct  181  KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN  240

Query  241  MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278
            MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278

4) tcpD in NC_012582


> NC_002505_P3|16|G14|15640850|NP_230481.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21614..22450|-|VC0833|toxin 
co-regulated 
pilus biosynthesis protein D
Length=278

 Score =  414 bits (1559),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 278/278 (100%), Positives = 278/278 (100%), Gaps = 0/278 (0%)

Query  1    MVNVIMKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQ  60
            MVNVIMKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQ
Sbjct  1    MVNVIMKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQ  60

Query  61   ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV  120
            ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV
Sbjct  61   ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV  120

Query  121  NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD  180
            NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD
Sbjct  121  NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD  180

Query  181  KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN  240
            KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN
Sbjct  181  KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN  240

Query  241  MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278
            MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278

5) tcpD in NC_009457


> NC_002505_P3|16|G14|15640850|NP_230481.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21614..22450|-|VC0833|toxin 
co-regulated 
pilus biosynthesis protein D
Length=278

 Score =  414 bits (1559),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 278/278 (100%), Positives = 278/278 (100%), Gaps = 0/278 (0%)

Query  1    MVNVIMKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQ  60
            MVNVIMKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQ
Sbjct  1    MVNVIMKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQ  60

Query  61   ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV  120
            ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV
Sbjct  61   ARLQKIQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNV  120

Query  121  NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD  180
            NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD
Sbjct  121  NCNLAFKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERD  180

Query  181  KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN  240
            KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN
Sbjct  181  KSENIIEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIEN  240

Query  241  MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278
            MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  MPEKNLGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278

6) O3Y_03875 in NC_016944


> NC_002505_P3|16|G14|15640850|NP_230481.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21614..22450|-|VC0833|toxin 
co-regulated 
pilus biosynthesis protein D
Length=278

 Score =  406 bits (1529),  Expect = 5e-115, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  1    MKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60
            MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK
Sbjct  6    MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  65

Query  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120
            IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA
Sbjct  66   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  125

Query  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180
            FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI
Sbjct  126  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  185

Query  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240
            IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN
Sbjct  186  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  245

Query  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273
            LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  246  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278

7) tcpD in NC_016445


> NC_002505_P3|16|G14|15640850|NP_230481.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21614..22450|-|VC0833|toxin 
co-regulated 
pilus biosynthesis protein D
Length=278

 Score =  406 bits (1529),  Expect = 5e-115, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  1    MKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60
            MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK
Sbjct  6    MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  65

Query  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120
            IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA
Sbjct  66   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  125

Query  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180
            FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI
Sbjct  126  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  185

Query  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240
            IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN
Sbjct  186  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  245

Query  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273
            LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  246  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278