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Homologs of EXA11 gene of DQ437742

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) NCGM2_1796
( YP_005980041.1 )

hypothetical protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

8e-35

100

2) PA14_28750
( YP_790453.1 )

hypothetical protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

3e-33

3) NCGM2_1843
( YP_005980088.1 )

putative transposase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

1e-27

4) NIDE0914
( YP_003796603.1 )

transposase (C-terminal fragment)

NC_014355
(Candidatus Nitrospira defluvii )

3e-19

5) XOO_2917
( YP_451946.1 )

ISXoo3 transposase orfB

NC_007705
(Xanthomonas oryzae MAFF 311018)

2e-17

6) KPN2242_01645
( YP_005952818.1 )

putative transposase-related protein

NC_017540
(Klebsiella pneumoniae KCTC 2242)

3e-17

7) CTU_24710
( YP_003210834.1 )

hypothetical protein

NC_013282
(Cronobacter turicensis z3032)

1e-16

8) Nmul_A1441
( YP_412136.1 )

putative transposase

NC_007614
(Nitrosospira multiformis ATCC 25196)

2e-16

9) Nmul_A2054
( YP_412740.1 )

putative transposase

NC_007614
(Nitrosospira multiformis ATCC 25196)

2e-16

10) Nmul_A1569
( YP_412262.1 )

putative transposase

NC_007614
(Nitrosospira multiformis ATCC 25196)

4e-16

11) Nmul_A1696
( YP_412386.1 )

putative transposase

NC_007614
(Nitrosospira multiformis ATCC 25196)

4e-16

12) LHK_00816
( YP_002794818.1 )

transposase

NC_012559
(Laribacter hongkongensis HLHK9)

1e-15

13) Nmul_A2009
( YP_412696.1 )

putative transposase

NC_007614
(Nitrosospira multiformis ATCC 25196)

2e-15

14) S70_13385
( YP_006217208.1 )

transposase

NC_017731
(Providencia stuartii MRSN 2154)

3e-15

15) A464_2194
( YP_008322789.1 )

Mobile element protein

NC_021870
(Salmonella bongori N268-08)

5e-14

16) wcw_1888
( YP_003710232.1 )

integrase

NC_014225
(Waddlia chondrophila WSU 86-1044)

3e-09

• Sequence Alignments

1) NCGM2_1796 in NC_017549


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score =  139 bits (511),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%)

Query  1   MAYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLaeaririaawrrDYNEH  60
           MAYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEH
Sbjct  1   MAYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEH  60

Query  61  RPHSAIGNLTPAKFAAKWRASQQQPRHEKLISTPGRTN  98
           RPHSAIGNLTPAKFAAKWRASQQQPRHEKLISTPGRTN
Sbjct  61  RPHSAIGNLTPAKFAAKWRASQQQPRHEKLISTPGRTN  98

2) PA14_28750 in NC_008463


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score =  134 bits (491),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 81/97 (84%), Positives = 86/97 (89%), Gaps = 0/97 (0%)

Query  28   AYQRDIKLKLIQPGKPTQNAFIKSVNGKFRDECLNEYWFCSLAESRIRVAAWRRDYNEHR  87
            AYQRDIKLKL Q GKPTQNAFI S +GKFRDEC NE WFCSLAE+RIR+AAWRRDYNEHR
Sbjct  2    AYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHR  61

Query  88   PHSAIGNLTPAEFAASWRARQQQLKQEKLISTPGPTN  124
            PHSAIGNLTPA FAA WRA QQQ ++EKLISTPG TN
Sbjct  62   PHSAIGNLTPAKFAAKWRASQQQPRHEKLISTPGRTN  98

3) NCGM2_1843 in NC_017549


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score =  115 bits (420),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 74/93 (80%), Positives = 83/93 (90%), Gaps = 3/93 (3%)

Query  28   ACQRDIKLKLIQPGQPTQSAFIESFNGKFRGECLNEH--CSLVEARIRIAAWR-DYNEHR  84
            A QRDIKLKL Q G+PTQ+AFIESF+GKFR+EC NEH  CSL EARIRIAAWR DYNEHR
Sbjct  2    AYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHR  61

Query  85   PHSAIGNLSPAEFAAKWRTNQQQLKREKLISTP  117
            PHSAIGNL+PA FAAKWR++QQQ ++EKLISTP
Sbjct  62   PHSAIGNLTPAKFAAKWRASQQQPRHEKLISTP  94

4) NIDE0914 in NC_014355


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 88.1 bits (315),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 46/90 (52%), Positives = 69/90 (77%), Gaps = 0/90 (0%)

Query  37   QHGVHLHFIQPGKPVQNAFIESFNGKFRDECLNEHWFMTLQEAQLVMEAWRREYNEERTH  96
            Q+++ L + Q GKP QNAFIESF+GKFRDEC NEHWF +L EA++ + AWRR+YNE+R H
Sbjct  4    QRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHRPH  63

Query  97   SAIGDVTPQQFIRNHQAGAHRTQDSTTLTV  126
            SAIG++TP +F  + +A+ ++ ++   ++ 
Sbjct  64   SAIGNLTPAKFAAKWRASQQQPRHEKLIST  93

5) XOO_2917 in NC_007705


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 82.1 bits (292),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 41/69 (60%), Positives = 54/69 (79%), Gaps = 0/69 (0%)

Query  1   MQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKAI  60
           ++L+  Q GKP QNA++ESF+G++RDEC NEHWF +L +AR  I  WRR+YNEHRP  AI
Sbjct  7   IKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHRPHSAI  66

Query  61  GAMTPATYA  69
           G +TPA +A
Sbjct  67  GNLTPAKFA  75

6) KPN2242_01645 in NC_017540


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 81.5 bits (290),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 38/82 (47%), Positives = 62/82 (76%), Gaps = 0/82 (0%)

Query  27   AYEHGVTMDLSRPGKPTDNPFIESFNGSLRDECLNIHWFLSLEDAQDKLDNWRREYNHER  86
            AY++++ + L++ GKPT+N+FIESF+G +RDEC N HWF SL +A+ ++  WRR+YN++R
Sbjct  2    AYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHR  61

Query  87   THSSLNDMTPAEFIRSLRKDED  108
             HS++ ++TPA F    R  ++
Sbjct  62   PHSAIGNLTPAKFAAKWRASQQ  83

7) CTU_24710 in NC_013282


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 79.4 bits (282),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 60/84 (72%), Gaps = 0/84 (0%)

Query  1   MRLIQPGKPTQNGFIESFNGRFRDECLNEHGFSDILHARKIINDWRQDYNESRPHSSLNY  60
           ++L Q GKPTQN+FIESF+G+FRDEC NEH F  + +AR  I  WR+DYNE RPHS++  
Sbjct  9   LKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGN  68

Query  61  QTLAEFSASWRNGKLEGKQTDITN  84
            T A F+A WR ++ + ++  + +
Sbjct  69  LTPAKFAAKWRASQQQPRHEKLIS  92

8) Nmul_A1441 in NC_007614


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 78.6 bits (279),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 40/76 (53%), Positives = 58/76 (77%), Gaps = 0/76 (0%)

Query  6   AYHHQARIDFSRPGKPTDNCHIETFNGSFRDECLNLHWFETLEEAKTIIEDWRRDYNESR  65
           AY+++ ++ +++ GKPT+N  IE+F+G FRDEC N HWF +L EA+  I  WRRDYNE R
Sbjct  2   AYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHR  61

Query  66  PHSTLNDLSPAEFAHR  81
           PHS++ +L+PA FA +
Sbjct  62  PHSAIGNLTPAKFAAK  77

9) Nmul_A2054 in NC_007614


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 78.6 bits (279),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 40/76 (53%), Positives = 58/76 (77%), Gaps = 0/76 (0%)

Query  6   AYHHQARIDFSRPGKPTDNCHIETFNGSFRDECLNLHWFETLEEAKTIIEDWRRDYNESR  65
           AY+++ ++ +++ GKPT+N  IE+F+G FRDEC N HWF +L EA+  I  WRRDYNE R
Sbjct  2   AYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHR  61

Query  66  PHSTLNDLSPAEFAHR  81
           PHS++ +L+PA FA +
Sbjct  62  PHSAIGNLTPAKFAAK  77

10) Nmul_A1569 in NC_007614


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 77.6 bits (275),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 39/76 (52%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  6   AYHHQARIDFSRPGKPTDNCHIETFNGSFRDECLNLHWFETLEEAKAIIEDWRRDYNESR  65
           AY+++ ++ +++ GKPT+N  IE+F+G FRDEC N HWF +L EA+  I  WRRDYNE R
Sbjct  2   AYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHR  61

Query  66  PHSTLNDLSPAEFVHR  81
           PHS++ +L+PA F  +
Sbjct  62  PHSAIGNLTPAKFAAK  77

11) Nmul_A1696 in NC_007614


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 77.6 bits (275),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 39/76 (52%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  6   AYHHQARIDFSRPGKPTDNCHIETFNGSFRDECLNLHWFETLEEAKAIIEDWRRDYNESR  65
           AY+++ ++ +++ GKPT+N  IE+F+G FRDEC N HWF +L EA+  I  WRRDYNE R
Sbjct  2   AYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHR  61

Query  66  PHSTLNDLSPAEFVHR  81
           PHS++ +L+PA F  +
Sbjct  62  PHSAIGNLTPAKFAAK  77

12) LHK_00816 in NC_012559


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 76.3 bits (270),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 41/71 (58%), Positives = 58/71 (82%), Gaps = 0/71 (0%)

Query  8   RGIQLFLIEPGKPNQNAYIESFNGRFRDECLNEHWFTSLRHAQVVIEARWREYNNERPKK  67
           R+I+L L + GKP QNA+IESF+G+FRDEC NEHWF SL +A++ I A++R+YN++RP  
Sbjct  5   RDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHRPHS  64

Query  68  GLGGLTPAAYA  78
           ++G LTPA +A
Sbjct  65  AIGNLTPAKFA  75

13) Nmul_A2009 in NC_007614


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 75.2 bits (266),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 39/76 (52%), Positives = 56/76 (74%), Gaps = 0/76 (0%)

Query  6   AYHPQARIDFSRPGKPTDNCHIETFNGSFRDECLNLHWFETLEEAKAIIEDWGRDYNESR  65
           AY+ + ++ +++ GKPT+N  IE+F+G FRDEC N HWF +L EA+  I  W RDYNE R
Sbjct  2   AYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHR  61

Query  66  PHSTLNDLSPAEFAHR  81
           PHS++ +L+PA FA +
Sbjct  62  PHSAIGNLTPAKFAAK  77

14) S70_13385 in NC_017731


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 74.4 bits (263),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 37/72 (52%), Positives = 54/72 (75%), Gaps = 0/72 (0%)

Query  7   ETGVTLGFIQPGKPTQNAFVESLNGKFRNECLNQHWFRTLDEARYEIELWREHYNHVRPH  66
           + ++ L + Q GKPTQNAF+ES++GKFR+EC N+HWF +L EAR  I  WR +YN+ RPH
Sbjct  4   QRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHRPH  63

Query  67  SSLNYMSPVAYA  78
           S++  ++P  +A
Sbjct  64  SAIGNLTPAKFA  75

15) BDL_4875 in NC_021877


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 73.4 bits (259),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 40/74 (55%), Positives = 57/74 (78%), Gaps = 0/74 (0%)

Query  5   AYEHGVELDFSRPGTPTDNAKVESFNGRFRQECLNAHWFLSLADAQSKIDDWRTYYNEVR  64
           AY++++ L +++ G PT+NA +ESF+G+FR+EC N HWF SLA+A+ +I  WR  YNE R
Sbjct  2   AYQRDIKLKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHR  61

Query  65  PHSALQWMTPAEFA  78
           PHSA+  +TPA FA
Sbjct  62  PHSAIGNLTPAKFA  75

16) A464_2194 in NC_021870


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 70.5 bits (248),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 54/75 (72%), Gaps = 0/75 (0%)

Query  1   MDVSRAGNPTDNPFTESFNGSLRDECLNIHWFLSLEDAQEKLDNWRREYNHERTHSSLNG  60
           + +++ G+PT+N+F ESF+G +RDEC N HWF SL +A+ ++  WRR+YN++R HS++  
Sbjct  9   LKLTQLGKPTQNAFIESFSGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGN  68

Query  61  MTPAEFIRSLRKDED  75
           +TPA F    R  ++
Sbjct  69  LTPAKFAAKWRASQQ  83

17) wcw_1888 in NC_014225


> DQ437742|16|G12|90569549|ABD94620.1|Pseudomonas_aeruginosa_6077|+|18421..18717|-|EXA11|IS407 
transposase OrfB
Length=98

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 29/72 (41%), Positives = 48/72 (67%), Gaps = 2/72 (2%)

Query  18  NGKLRDECLNENWFLNLSDARRIVGKWANEYNLYRPHSALGGLTPHELASQLSECLNSS-  76
           +GK+RDEC NE+WF +L++AR  ++ W  +YN  RPHSA+G LTP  +A++     + + 
Sbjct  27  SGKFRDECPNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGNLTPAKFAAKWRASQQQPR  86

Query  77  -EKMLQLTGTSS  87
            EK++   G ++
Sbjct  87  HEKLISTPGRTN  98