Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of papB gene of DQ095216

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECP_0292
( YP_668226.1 )

major pilu subunit operon regulatory protein PapB

NC_008253
(Escherichia coli 536)

7e-38

2) sfaB
( YP_006105223.1 )

F1C and S fimbrial switch regulatory protein SfaB

NC_017631
(Escherichia coli ABU 83972)

7e-38

3) sfaB
( NP_753152.1 )

F1C and S fimbrial switch regulatory protein

NC_004431
(Escherichia coli CFT073)

7e-38

4) sfaB
( YP_006153257.1 )

putative F1C and S fimbrial switch regulatory protein

NC_017652
(Escherichia coli clone D i14)

7e-38

5) sfaB
( YP_006148338.1 )

putative F1C and S fimbrial switch regulatory protein

NC_017651
(Escherichia coli clone D i2)

7e-38

6) ECOK1_1097
( YP_006100305.1 )

S fimbrial adhesin

NC_017628
(Escherichia coli IHE3034)

7e-38

7) papB
( YP_008570954.1 )

Major pilu subunit operon regulatory protein papB

NC_022370
(Escherichia coli PMV-1)

7e-38

8) UM146_12365
( YP_006111354.1 )

major pilu subunit operon regulatory protein PapB

NC_017632
(Escherichia coli UM146)

7e-38

9) sfaB
( YP_540123.1 )

S fimbrial switch regulatory protein

NC_007946
(Escherichia coli UTI89)

7e-38

10) papB
( YP_006108765.1 )

pap operon regulatory protein PapB

NC_017631
(Escherichia coli ABU 83972)

2e-37

100

11) APECO1_3518
( YP_854257.1 )

PapB-like protein

NC_008563
(Escherichia coli APEC O1)

2e-37

100

12) papB
( YP_002410450.1 )

pap operon regulatory protein PapB

NC_011750
(Escherichia coli IAI39)

2e-37

100

13) papB
( YP_002392885.1 )

pap operon regulatory protein PapB

NC_011742
(Escherichia coli S88)

2e-37

100

14) UM146_21690
( YP_006113178.1 )

pap operon regulatory protein PapB

NC_017632
(Escherichia coli UM146)

2e-37

100

15) papB
( YP_002414018.1 )

pap operon regulatory protein PapB

NC_011751
(Escherichia coli UMN026)

2e-37

100

16) papB
( YP_543830.1 )

pap operon regulatory protein PapB

NC_007946
(Escherichia coli UTI89)

2e-37

100

17) ECP_4542
( YP_672379.1 )

major pilu subunit operon regulatory protein PapB

NC_008253
(Escherichia coli 536)

2e-36

18) pefB
( YP_005235550.1 )

plasmid-encoded fimbriae;regulation

NC_016855
(Salmonella enterica 14028S)

6e-21

19) SBOV47791
( YP_008519260.1 )

hypothetical protein

NC_022248
(Salmonella enterica 3114)

6e-21

20) pefB
( YP_005412516.1 )

regulatory protein

NC_017054
(Salmonella enterica 798)

6e-21

21) pefB
( NP_490511.1 )

regulatory protein

NC_003277
(Salmonella enterica LT2)

6e-21

22) pefB
( YP_002635599.1 )

PefB

NC_012124
(Salmonella enterica RKS4594)

6e-21

23) pefB
( YP_209277.1 )

major pilu subunit operon regulatory protein PapB

NC_006855
(Salmonella enterica SC-B67)

6e-21

24) pefB
( YP_006203718.1 )

fimbrial regulator

NC_017720
(Salmonella enterica SL1344)

6e-21

25) pefB
( YP_005245668.1 )

fimbrial regulator

NC_016858
(Salmonella enterica ST4/74)

6e-21

26) STMDT12_L00200
( YP_005250439.1 )

fimbrial regulator

NC_016861
(Salmonella enterica T000240)

6e-21

27) STU288_1p00205
( YP_007905775.1 )

fimbriae biosynthesis regulatory protein

NC_021155
(Salmonella enterica U288)

6e-21

28) pefB
( YP_005255121.1 )

plasmid-encoded fimbriae;regulation

NC_016864
(Salmonella enterica UK-1)

6e-21

29) CFSAN002050_04840
( YP_008258922.1 )

fimbriae biosynthesis regulatory protein

NC_021818
(Salmonella enterica CFSAN002050)

1e-16

30) SeSA_A4577
( YP_002117254.1 )

PefB

NC_011094
(Salmonella enterica CVM19633)

1e-16

31) ETAC_14640
( YP_007630409.1 )

fimbriae biosynthesis regulatory protein

NC_020796
(Edwardsiella tarda C07-087)

3e-16

32) ETAE_1255
( YP_003295309.1 )

hypothetical protein

NC_013508
(Edwardsiella tarda EIB202)

2e-15

33) EKO11_4758
( YP_005280371.1 )

P pili regulatory PapB protein

NC_016904
(Escherichia coli KO11FL)

1e-14

34) ECW_P1m0081
( YP_006127365.1 )

hypothetical protein

NC_017637
(Escherichia coli W)

1e-14

35) WFL_23765
( YP_006176131.1 )

fimbriae biosynthesis regulatory protein

NC_017665
(Escherichia coli W)

1e-14

36) ETAC_10655
( YP_007629612.1 )

major pilu subunit operon regulatory protein PapB

NC_020796
(Edwardsiella tarda C07-087)

1e-11

37) ETAE_2247
( YP_003296293.1 )

major pilu subunit operon regulatory protein PapB

NC_013508
(Edwardsiella tarda EIB202)

1e-11

• Sequence Alignments

1) ECP_0292 in NC_008253


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 84/104 (81%), Positives = 95/104 (92%), Gaps = 0/104 (0%)

Query  1    MAQHEVITRGGDAFLLKLRESALSSGSMSEEQFFLLIGISSIHSDRVILAMKDYLVSGHS  60
            MA+HEVI+R+G+AFLL++RES L +GSMSE +FFLLIGISSIHSDRVILAMKDYLV+GHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKDVCEKYQMNNGYFSTTLGRLTRLNVLVARLAPYYTDSVSAIA  104
            RK+VCEKYQMNNGYFSTTLGRL RLN L ARLAPYYTD  SA+ 
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

2) sfaB in NC_017631


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 84/104 (81%), Positives = 95/104 (92%), Gaps = 0/104 (0%)

Query  1    MAQHEVITRGGDAFLLKLRESALSSGSMSEEQFFLLIGISSIHSDRVILAMKDYLVSGHS  60
            MA+HEVI+R+G+AFLL++RES L +GSMSE +FFLLIGISSIHSDRVILAMKDYLV+GHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKDVCEKYQMNNGYFSTTLGRLTRLNVLVARLAPYYTDSVSAIA  104
            RK+VCEKYQMNNGYFSTTLGRL RLN L ARLAPYYTD  SA+ 
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

3) sfaB in NC_004431


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 84/104 (81%), Positives = 95/104 (92%), Gaps = 0/104 (0%)

Query  1    MAQHEVITRGGDAFLLKLRESALSSGSMSEEQFFLLIGISSIHSDRVILAMKDYLVSGHS  60
            MA+HEVI+R+G+AFLL++RES L +GSMSE +FFLLIGISSIHSDRVILAMKDYLV+GHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKDVCEKYQMNNGYFSTTLGRLTRLNVLVARLAPYYTDSVSAIA  104
            RK+VCEKYQMNNGYFSTTLGRL RLN L ARLAPYYTD  SA+ 
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

4) sfaB in NC_017652


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 84/104 (81%), Positives = 95/104 (92%), Gaps = 0/104 (0%)

Query  1    MAQHEVITRGGDAFLLKLRESALSSGSMSEEQFFLLIGISSIHSDRVILAMKDYLVSGHS  60
            MA+HEVI+R+G+AFLL++RES L +GSMSE +FFLLIGISSIHSDRVILAMKDYLV+GHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKDVCEKYQMNNGYFSTTLGRLTRLNVLVARLAPYYTDSVSAIA  104
            RK+VCEKYQMNNGYFSTTLGRL RLN L ARLAPYYTD  SA+ 
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

5) sfaB in NC_017651


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 84/104 (81%), Positives = 95/104 (92%), Gaps = 0/104 (0%)

Query  1    MAQHEVITRGGDAFLLKLRESALSSGSMSEEQFFLLIGISSIHSDRVILAMKDYLVSGHS  60
            MA+HEVI+R+G+AFLL++RES L +GSMSE +FFLLIGISSIHSDRVILAMKDYLV+GHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKDVCEKYQMNNGYFSTTLGRLTRLNVLVARLAPYYTDSVSAIA  104
            RK+VCEKYQMNNGYFSTTLGRL RLN L ARLAPYYTD  SA+ 
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

6) ECOK1_1097 in NC_017628


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 84/104 (81%), Positives = 95/104 (92%), Gaps = 0/104 (0%)

Query  1    MAQHEVITRGGDAFLLKLRESALSSGSMSEEQFFLLIGISSIHSDRVILAMKDYLVSGHS  60
            MA+HEVI+R+G+AFLL++RES L +GSMSE +FFLLIGISSIHSDRVILAMKDYLV+GHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKDVCEKYQMNNGYFSTTLGRLTRLNVLVARLAPYYTDSVSAIA  104
            RK+VCEKYQMNNGYFSTTLGRL RLN L ARLAPYYTD  SA+ 
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

7) papB in NC_022370


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 84/104 (81%), Positives = 95/104 (92%), Gaps = 0/104 (0%)

Query  1    MAQHEVITRGGDAFLLKLRESALSSGSMSEEQFFLLIGISSIHSDRVILAMKDYLVSGHS  60
            MA+HEVI+R+G+AFLL++RES L +GSMSE +FFLLIGISSIHSDRVILAMKDYLV+GHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKDVCEKYQMNNGYFSTTLGRLTRLNVLVARLAPYYTDSVSAIA  104
            RK+VCEKYQMNNGYFSTTLGRL RLN L ARLAPYYTD  SA+ 
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

8) UM146_12365 in NC_017632


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 84/104 (81%), Positives = 95/104 (92%), Gaps = 0/104 (0%)

Query  1    MAQHEVITRGGDAFLLKLRESALSSGSMSEEQFFLLIGISSIHSDRVILAMKDYLVSGHS  60
            MA+HEVI+R+G+AFLL++RES L +GSMSE +FFLLIGISSIHSDRVILAMKDYLV+GHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKDVCEKYQMNNGYFSTTLGRLTRLNVLVARLAPYYTDSVSAIA  104
            RK+VCEKYQMNNGYFSTTLGRL RLN L ARLAPYYTD  SA+ 
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

9) sfaB in NC_007946


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 84/104 (81%), Positives = 95/104 (92%), Gaps = 0/104 (0%)

Query  1    MAQHEVITRGGDAFLLKLRESALSSGSMSEEQFFLLIGISSIHSDRVILAMKDYLVSGHS  60
            MA+HEVI+R+G+AFLL++RES L +GSMSE +FFLLIGISSIHSDRVILAMKDYLV+GHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKDVCEKYQMNNGYFSTTLGRLTRLNVLVARLAPYYTDSVSAIA  104
            RK+VCEKYQMNNGYFSTTLGRL RLN L ARLAPYYTD  SA+ 
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

10) papB in NC_017631


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60
            MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKEVCEKYQMNNGYFSTTLGrlirlnalaarlaPYYTDESSAFD  104
            RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

11) APECO1_3518 in NC_008563


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60
            MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKEVCEKYQMNNGYFSTTLGrlirlnalaarlaPYYTDESSAFD  104
            RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

12) papB in NC_011750


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60
            MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKEVCEKYQMNNGYFSTTLGrlirlnalaarlaPYYTDESSAFD  104
            RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

13) papB in NC_011742


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60
            MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKEVCEKYQMNNGYFSTTLGrlirlnalaarlaPYYTDESSAFD  104
            RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

14) UM146_21690 in NC_017632


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60
            MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKEVCEKYQMNNGYFSTTLGrlirlnalaarlaPYYTDESSAFD  104
            RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

15) papB in NC_011751


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60
            MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKEVCEKYQMNNGYFSTTLGrlirlnalaarlaPYYTDESSAFD  104
            RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

16) papB in NC_007946


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60
            MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKEVCEKYQMNNGYFSTTLGrlirlnalaarlaPYYTDESSAFD  104
            RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

17) ECP_4542 in NC_008253


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score =  144 bits (531),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 100/104 (97%), Positives = 103/104 (99%), Gaps = 0/104 (0%)

Query  1    MAHHEIISRAGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHT  60
            MAHHE+ISR+GNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGH+
Sbjct  1    MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS  60

Query  61   RKEVCEKHQMNNGYFSTTLGrlirlnalaarlaPYYTDESSAFD  104
            RKEVCEK QMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD
Sbjct  61   RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD  104

18) SBOV47791 in NC_022248


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

19) pefB in NC_006855


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

20) pefB in NC_012124


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

21) pefB in NC_016855


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

22) pefB in NC_017054


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

23) pefB in NC_003277


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

24) pefB in NC_017720


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

25) pefB in NC_016858


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

26) STMDT12_L00200 in NC_016861


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

27) STU288_1p00205 in NC_021155


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

28) pefB in NC_016864


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 48/88 (55%), Positives = 71/88 (81%), Gaps = 1/88 (1%)

Query  13  GKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYE  72
           G+ ++L  IR + L+P+ ++E HF LLIGISSIHS+++I A++DYLV G SRK+VCE+Y+
Sbjct  11  GNAFLLN-IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQ  69

Query  73  VNNGYFSTSLNRLSRISQAAAQMVVYYS  100
           +NNGYFST+L RL R++  AA++  YY+
Sbjct  70  MNNGYFSTTLGRLIRLNALAARLAPYYT  97

29) CFSAN002050_04840 in NC_021818


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 79.2 bits (281),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 39/83 (47%), Positives = 64/83 (78%), Gaps = 0/83 (0%)

Query  14  VRAGELEPGAVSEEQFWLLVDISPIHSEKIILALKDYFVSGYSRKVVCERHGMSGGYLST  73
           +R + L PG++SE +F LL++IS+IHS+++ILA+KDY+V+G SRK VCE+  M+ GY+ST
Sbjct  18  IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQMNNGYFST  77

Query  74  SVNRLNFISRNVHKLAGYYSHHE  96
           ++ RL  ++    +LA YY+++ 
Sbjct  78  TLGRLIRLNALAARLAPYYTDES  100

30) SeSA_A4577 in NC_011094


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 79.2 bits (281),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 39/83 (47%), Positives = 64/83 (78%), Gaps = 0/83 (0%)

Query  14  VRAGELEPGAVSEEQFWLLVDISPIHSEKIILALKDYFVSGYSRKVVCERHGMSGGYLST  73
           +R + L PG++SE +F LL++IS+IHS+++ILA+KDY+V+G SRK VCE+  M+ GY+ST
Sbjct  18  IRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQMNNGYFST  77

Query  74  SVNRLNFISRNVHKLAGYYSHHE  96
           ++ RL  ++    +LA YY+++ 
Sbjct  78  TLGRLIRLNALAARLAPYYTDES  100

31) ETAC_14640 in NC_020796


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 78.1 bits (277),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 41/81 (51%), Positives = 64/81 (80%), Gaps = 0/81 (0%)

Query  19  RKQMLVAGALTDEWFDLLIDISPIHSPKAINALRDHLVGGDSRKAVCERYGVNAGYLSTC  78
           R  +L++G++++  F LLI+IS+IHS + I A++D LVGG+SRK VCE+Y +N GY+ST 
Sbjct  19  RESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQMNNGYFSTT  78

Query  79  MGRLFHTNQLAGQLAFYYRGD  99
           +GRL++ N LA++LA YY ++
Sbjct  79  LGRLIRLNALAARLAPYYTDE  99

32) ETAE_1255 in NC_013508


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 75.2 bits (266),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 35/79 (45%), Positives = 61/79 (78%), Gaps = 0/79 (0%)

Query  20  KQNRLCSGELSENQFWLLVEISPISSEKIIDAMWEYLILGRTRKEICERIGVSNGYLSTS  79
           +++ L +G +SE +F LL+ IS+I S+++I AM +YL+ G++RKE+CE+  ++NGY+ST+
Sbjct  19  RESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQMNNGYFSTT  78

Query  80  LGRLSHIHHIVSCLACYYK  98
           LGRL +++ + + LA YY 
Sbjct  79  LGRLIRLNALAARLAPYYT  97

33) EKO11_4758 in NC_016904


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 72.9 bits (257),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 36/86 (42%), Positives = 61/86 (71%), Gaps = 2/86 (2%)

Query  16  RTTSNF--RAKNMALIPGKVSEDLFDILIELSAIHSKKIINALRDYLVSGETRKTSCERY  73
           R+ + F    ++  L+PG +SE  F +LI +S+IHS ++I A++DYLV+G++RK  CE+Y
Sbjct  9   RSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKY  68

Query  74  GASVSYFSVALGRLFHVAQLVSQLVP  99
             + +YFS +LGRL+++  L ++L P
Sbjct  69  QMNNGYFSTTLGRLIRLNALAARLAP  94

34) ECW_P1m0081 in NC_017637


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 72.9 bits (257),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 36/86 (42%), Positives = 61/86 (71%), Gaps = 2/86 (2%)

Query  16  RTTSNF--RAKNMALIPGKVSEDLFDILIELSAIHSKKIINALRDYLVSGETRKTSCERY  73
           R+ + F    ++  L+PG +SE  F +LI +S+IHS ++I A++DYLV+G++RK  CE+Y
Sbjct  9   RSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKY  68

Query  74  GASVSYFSVALGRLFHVAQLVSQLVP  99
             + +YFS +LGRL+++  L ++L P
Sbjct  69  QMNNGYFSTTLGRLIRLNALAARLAP  94

35) WFL_23765 in NC_017665


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 72.9 bits (257),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 36/86 (42%), Positives = 61/86 (71%), Gaps = 2/86 (2%)

Query  16  RTTSNF--RAKNMALIPGKVSEDLFDILIELSAIHSKKIINALRDYLVSGETRKTSCERY  73
           R+ + F    ++  L+PG +SE  F +LI +S+IHS ++I A++DYLV+G++RK  CE+Y
Sbjct  9   RSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKY  68

Query  74  GASVSYFSVALGRLFHVAQLVSQLVP  99
             + +YFS +LGRL+++  L ++L P
Sbjct  69  QMNNGYFSTTLGRLIRLNALAARLAP  94

36) ETAC_10655 in NC_020796


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 62.6 bits (218),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 34/77 (45%), Positives = 50/77 (65%), Gaps = 0/77 (0%)

Query  13  DRFLYPGKVSIEHFEMLIELSGIRSKRVIMALERYLVGGEKRKTLCEANSVSLSYFSVKL  72
           +  L PG +S  HF +LI +S+I+S RVI+A+  YLVGG+ RK +CE   ++ +YFS  L
Sbjct  20  ESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQMNNGYFSTTL  79

Query  73  KQLHNCSVLVMKLCPYY  89
            +L   + L  +L PYY
Sbjct  80  GRLIRLNALAARLAPYY  96

37) ETAE_2247 in NC_013508


> DQ095216|16|G16|70608401|AAZ04473.1|Escherichia_coli_APEC_O1|-|19098..19412|papB|ORF_16|P 
pilus protein
Length=104

 Score = 62.6 bits (218),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 32/78 (42%), Positives = 50/78 (65%), Gaps = 0/78 (0%)

Query  13  DRFLYPGKVPIEHFEMLVELSGIRSKRVIMALERYLVGGEKRKTLCETNAVSLSYFSVKL  72
           +  L PG ++  HF +L+ +S+I+S RVI+A+  YLVGG+ RK +CE   ++ +YFS  L
Sbjct  20  ESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHSRKEVCEKYQMNNGYFSTTL  79

Query  73  KQLHNCSVLVMKLCPYYD  90
            +L   + L  +L PYY 
Sbjct  80  GRLIRLNALAARLAPYYT  97