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Homologs of tcpD gene of AF325734

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) tcpD in NC_012578


> AF325734|16|G16|13377555|AAK20790.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21852..22673|tcpD|-|toxin-coregulated 
pilus 
biosynthesis protein D
Length=273

 Score =  406 bits (1529),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  6    MKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  65
            MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK
Sbjct  1    MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60

Query  66   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  125
            IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA
Sbjct  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120

Query  126  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  185
            FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI
Sbjct  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180

Query  186  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  245
            IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN
Sbjct  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240

Query  246  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278
            LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273

2) VCD_003495 in NC_012668


> AF325734|16|G16|13377555|AAK20790.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21852..22673|tcpD|-|toxin-coregulated 
pilus 
biosynthesis protein D
Length=273

 Score =  406 bits (1529),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  6    MKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  65
            MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK
Sbjct  1    MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60

Query  66   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  125
            IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA
Sbjct  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120

Query  126  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  185
            FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI
Sbjct  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180

Query  186  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  245
            IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN
Sbjct  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240

Query  246  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278
            LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273

3) VC0833 in NC_002505


> AF325734|16|G16|13377555|AAK20790.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21852..22673|tcpD|-|toxin-coregulated 
pilus 
biosynthesis protein D
Length=273

 Score =  406 bits (1529),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  6    MKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  65
            MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK
Sbjct  1    MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60

Query  66   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  125
            IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA
Sbjct  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120

Query  126  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  185
            FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI
Sbjct  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180

Query  186  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  245
            IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN
Sbjct  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240

Query  246  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278
            LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273

4) tcpD in NC_012582


> AF325734|16|G16|13377555|AAK20790.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21852..22673|tcpD|-|toxin-coregulated 
pilus 
biosynthesis protein D
Length=273

 Score =  406 bits (1529),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  6    MKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  65
            MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK
Sbjct  1    MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60

Query  66   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  125
            IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA
Sbjct  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120

Query  126  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  185
            FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI
Sbjct  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180

Query  186  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  245
            IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN
Sbjct  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240

Query  246  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278
            LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273

5) tcpD in NC_009457


> AF325734|16|G16|13377555|AAK20790.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21852..22673|tcpD|-|toxin-coregulated 
pilus 
biosynthesis protein D
Length=273

 Score =  406 bits (1529),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  6    MKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  65
            MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK
Sbjct  1    MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60

Query  66   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  125
            IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA
Sbjct  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120

Query  126  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  185
            FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI
Sbjct  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180

Query  186  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  245
            IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN
Sbjct  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240

Query  246  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  278
            LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273

6) O3Y_03875 in NC_016944


> AF325734|16|G16|13377555|AAK20790.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21852..22673|tcpD|-|toxin-coregulated 
pilus 
biosynthesis protein D
Length=273

 Score =  406 bits (1527),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  1    MKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60
            MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK
Sbjct  1    MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60

Query  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120
            IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA
Sbjct  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120

Query  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180
            FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI
Sbjct  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180

Query  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240
            IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN
Sbjct  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240

Query  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273
            LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273

7) tcpD in NC_016445


> AF325734|16|G16|13377555|AAK20790.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|21852..22673|tcpD|-|toxin-coregulated 
pilus 
biosynthesis protein D
Length=273

 Score =  406 bits (1527),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  1    MKISSLKKGSNFSiniknikldkkllVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60
            MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK
Sbjct  1    MKISSLKKGSNFSINIKNIKLDKKLLVAIIFLVLSILGGGAYLYYENEKTKKLEQARLQK  60

Query  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120
            IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA
Sbjct  61   IQKENSDKQTYLSDFKSAFEGLDYQALTGFYDVLRSDIDFFRVNNWLLDVMDCNVNCNLA  120

Query  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180
            FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI
Sbjct  121  FKRGSFDTFTYLEMNRNGAVIKPQFDQNKLQFANVDYISGFRSIYLKDLTEQERDKSENI  180

Query  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240
            IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN
Sbjct  181  IEQCSTKLSELYNLQLLMKEQVKFKINLPRNVTSISGYDWVKNSDIKFGSIEIENMPEKN  240

Query  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273
            LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY
Sbjct  241  LGLMKNIMNNSMMITSISLQNSSFKSKLNYYCY  273