Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
putative membrane protein |
NC_003198 (Salmonella enterica CT18) |
4e-72 |
100 |
|
hypothetical protein |
NC_016832 (Salmonella enterica P-stx-12) |
4e-72 |
100 |
|
hypothetical protein |
NC_004631 (Salmonella enterica Ty2) |
4e-72 |
100 |
|
hypothetical protein |
NC_021176 (Salmonella enterica Ty21a) |
4e-72 |
100 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
3e-46 |
74 |
|
PilT protein |
NC_014121 (Enterobacter cloacae ATCC 13047) |
6e-46 |
74 |
|
PilT protein |
NC_011419 (Escherichia coli SE11) |
6e-45 |
68 |
|
PilT |
NC_021811 (Salmonella enterica 41578) |
6e-45 |
68 |
|
invasion protein IagB |
NC_021813 (Salmonella enterica CFSAN002069) |
6e-45 |
68 |
|
pilus protein |
NC_017718 (Salmonella enterica SL1344) |
6e-45 |
68 |
|
lytic transglycosylase PilT |
NC_011081 (Salmonella enterica SL476) |
6e-45 |
68 |
|
PilT |
NC_017675 (Salmonella enterica ST4/74) |
6e-45 |
68 |
|
putative conjugative transfer outer membrane protein PilT |
NC_016816 (Pantoea ananatis LMG 5342) |
7e-45 |
72 |
|
type IV prepilin cluster |
NC_018659 (Escherichia coli 2011C-3493) |
1e-44 |
66 |
|
lytic transglycosylase |
NC_016904 (Escherichia coli KO11FL) |
1e-44 |
66 |
|
IncI1 conjugal transfer lytic transglycosylase PilT |
NC_017642 (Escherichia coli UMNK88) |
1e-44 |
66 |
|
Type IVB thin prepilin peptidase |
NC_017637 (Escherichia coli W) |
1e-44 |
66 |
|
type IV prepilin cluster |
NC_017665 (Escherichia coli W) |
1e-44 |
66 |
|
Lytic transglycosylase catalytic |
NC_022268 (Serratia sp. ATCC 39006) |
2e-44 |
73 |
|
transglycosylase |
NC_017554 (Pantoea ananatis PA13) |
3e-44 |
66 |
|
hypothetical protein |
NC_017445 (Erwinia sp. Ejp617) |
7e-44 |
68 |
|
twitching motility protein PilT |
NC_012751 (Candidatus Hamiltonella defensa T5A) |
2e-35 |
55 |
|
PilT lytic transglycosylase, SLT domain protein |
NC_012752 (Candidatus Hamiltonella defensa T5A) |
2e-35 |
55 |
|
type IV pilus protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
8e-34 |
56 |
|
PilT lytic transglycosylase |
NC_012751 (Candidatus Hamiltonella defensa T5A) |
2e-33 |
57 |
|
Lytic transglycosylase PilT |
NC_017845 (Pectobacterium sp. SCC3193) |
2e-33 |
56 |
|
conjugal transfer protein |
NC_013973 (Erwinia amylovora ATCC 49946) |
7e-33 |
54 |
|
PilT lytic transglycosylase |
NC_012751 (Candidatus Hamiltonella defensa T5A) |
1e-32 |
55 |
|
lytic transglycosylase |
NC_013421 (Pectobacterium wasabiae WPP163) |
3e-32 |
54 |
|
invasion protein IagB |
NC_022371 (Escherichia coli PMV-1) |
1e-31 |
56 |
|
pilT protein, putative |
NC_004632 (Pseudomonas syringae DC3000) |
1e-31 |
49 |
|
pilT protein |
NC_004633 (Pseudomonas syringae DC3000) |
7e-32 |
47 |
|
putative peptidoglycan-binding-like protein |
NC_011750 (Escherichia coli IAI39) |
2e-31 |
46 |
|
Peptidoglycan-binding-like protein |
NC_011745 (Escherichia coli ED1a) |
3e-31 |
48 |
|
putative peptidoglycan-binding-like protein |
NC_011751 (Escherichia coli UMN026) |
4e-31 |
46 |
|
lytic transglycosylase PilT |
NC_011353 (Escherichia coli EC4115) |
6e-31 |
52 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
6e-31 |
52 |
|
lytic transglycosylase |
NC_013008 (Escherichia coli TW14359) |
6e-31 |
52 |
|
hypothetical protein |
NC_017906 (Escherichia coli Xuzhou21) |
6e-31 |
52 |
|
putative lytic transglycosylase |
NC_017626 (Escherichia coli 042) |
2e-30 |
49 |
|
lytic transglycosylase |
NC_017445 (Erwinia sp. Ejp617) |
7e-30 |
43 |
|
lytic transglycosylase |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
1e-29 |
43 |
|
putative peptidoglycan-binding-like protein |
NC_017646 (Escherichia coli CE10) |
6e-29 |
48 |
|
hypothetical protein |
NC_002695 (Escherichia coli Sakai) |
8e-28 |
53 |
|
transglycosylase PilT |
NC_011311 (Aliivibrio salmonicida LFI1238) |
6e-27 |
46 |
|
peptidoglycan-binding-like protein precursor |
NC_011748 (Escherichia coli 55989) |
3e-25 |
50 |
|
putative peptidoglycan binding protein |
NC_017633 (Escherichia coli ETEC H10407) |
3e-25 |
50 |
|
putative peptidoglycan-binding-like protein |
NC_011741 (Escherichia coli IAI1) |
3e-25 |
50 |
|
lytic transglycosylase |
NC_016902 (Escherichia coli KO11FL) |
3e-25 |
50 |
|
Peptidoglycan-binding-like protein precursor |
NC_017663 (Escherichia coli P12b) |
3e-25 |
50 |
|
lytic transglycosylase |
NC_010468 (Escherichia coli ATCC 8739) |
5e-25 |
52 |
|
hypothetical protein |
NC_013364 (Escherichia coli 11128) |
1e-23 |
51 |
|
peptidoglycan-binding like protein precursor |
NC_013361 (Escherichia coli 11368) |
1e-23 |
51 |
|
peptidoglycan-binding-like protein precursor |
NC_013353 (Escherichia coli 12009) |
2e-23 |
51 |
|
peptidoglycan-binding-like protein precursor |
NC_018650 (Escherichia coli 2009EL-2050) |
2e-23 |
51 |
|
peptidoglycan-binding-like protein precursor |
NC_018661 (Escherichia coli 2009EL-2071) |
2e-23 |
51 |
|
peptidoglycan-binding-like protein precursor |
NC_018658 (Escherichia coli 2011C-3493) |
2e-23 |
51 |
|
putative peptidoglycan binding protein |
NC_020163 (Escherichia coli APEC O78) |
2e-23 |
51 |
|
lytic transglycosylase |
NC_017625 (Escherichia coli DH1) |
2e-23 |
51 |
|
putative peptidoglycan-binding-like protein precursor |
NC_017638 (Escherichia coli DH1) |
2e-23 |
51 |
|
putative peptidoglycan-binding-like protein precursor |
NC_017660 (Escherichia coli KO11FL) |
2e-23 |
51 |
|
putative lytic transglycosylase |
NC_017635 (Escherichia coli W) |
2e-23 |
51 |
|
putative peptidoglycan-binding-like protein precursor |
NC_017664 (Escherichia coli W) |
2e-23 |
51 |
|
transglycosylase SLT domain-containing protein |
NC_009704 (Yersinia pseudotuberculosis IP 31758) |
3e-22 |
43 |
|
cell invasion protein |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
1e-19 |
41 |
|
cell invasion protein |
NC_019670 (Pseudomonas sp. UW4) |
3e-19 |
41 |
|
lytic transglycosylase |
NC_010529 (Cupriavidus taiwanensis LMG 19424) |
5e-10 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF000001' AND ph.id_pai_orf='16' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc