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Homologs of HP0536 gene of AB120424

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HMPREF4655_21066
( YP_005770153.1 )

cag pathogenicity island protein

NC_017360
(Helicobacter pylori 35A)

3e-33

2) HPSH_04210
( YP_001910307.1 )

cag pathogenicity island protein CagP

NC_010698
(Helicobacter pylori Shi470)

1e-32

3) HPV225_0539
( YP_005763470.1 )

cag pathogenicity island protein (cagP)

NC_017355
(Helicobacter pylori v225d)

1e-32

4) HMPREF0462_0881
( YP_005785448.1 )

cag pathogenicity island protein

NC_017375
(Helicobacter pylori 83)

9e-33

5) cagP
( YP_005793176.1 )

cag pathogenicity island protein P

NC_017382
(Helicobacter pylori 51)

2e-32

6) HPKB_0807
( YP_005762315.1 )

cag island protein

NC_017354
(Helicobacter pylori 52)

2e-32

7) HP0536
( NP_207332.1 )

cag pathogenicity island protein (cag15)

NC_000915
(Helicobacter pylori 26695)

2e-32

8) cagP
( NP_223202.1 )

cag island protein

NC_000921
(Helicobacter pylori J99)

4e-32

9) cagP
( YP_002301177.1 )

cag pathogenicity island protein P

NC_011498
(Helicobacter pylori P12)

1e-30

• Sequence Alignments

1) HMPREF4655_21066 in NC_017360


> AB120424|16|G16|46091568|BAD14007.1|Helicobacter_pylori_OK109|-|21380..21724|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  134 bits (492),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 113/114 (99%), Positives = 114/114 (100%), Gaps = 0/114 (0%)

Query  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALIIKPsffyyttyllllvslsviskyyllNHANFTMKLIILMTQWQNWFL  114
            FLFALIIKPSFFYYTTYLLLLVSLSVISKYYLL+HANFTMKLIILMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL  114

2) HPSH_04210 in NC_010698


> AB120424|16|G16|46091568|BAD14007.1|Helicobacter_pylori_OK109|-|21380..21724|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  132 bits (484),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 113/114 (99%), Positives = 113/114 (99%), Gaps = 0/114 (0%)

Query  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALITKPsffyyttyllllvslsviskyyllsHANFTMKLIILMTQWQNWFL  114
            FLFALI KPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL  114

3) HPV225_0539 in NC_017355


> AB120424|16|G16|46091568|BAD14007.1|Helicobacter_pylori_OK109|-|21380..21724|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  132 bits (484),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 113/114 (99%), Positives = 113/114 (99%), Gaps = 0/114 (0%)

Query  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALITKPsffyyttyllllvslsviskyyllsHANFTMKLIILMTQWQNWFL  114
            FLFALI KPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL  114

4) HMPREF0462_0881 in NC_017375


> AB120424|16|G16|46091568|BAD14007.1|Helicobacter_pylori_OK109|-|21380..21724|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  132 bits (485),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 112/114 (99%), Positives = 114/114 (100%), Gaps = 0/114 (0%)

Query  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALIIKPsffyyttyllllvslsiiskyyllsHANFTMKLIMLMTQWQNWFL  114
            FLFALIIKPSFFYYTTYLLLLVSLS+ISKYYLLSHANFTMKLI+LMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL  114

5) cagP in NC_017382


> AB120424|16|G16|46091568|BAD14007.1|Helicobacter_pylori_OK109|-|21380..21724|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  131 bits (480),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 112/114 (99%), Positives = 113/114 (99%), Gaps = 0/114 (0%)

Query  1    MEQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            M QPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALIIKPsffyyttyllllvslsviskyyllsHANFTMKLIMLMTQWQNWFL  114
            FLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLI+LMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL  114

6) HPKB_0807 in NC_017354


> AB120424|16|G16|46091568|BAD14007.1|Helicobacter_pylori_OK109|-|21380..21724|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  131 bits (481),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 112/114 (99%), Positives = 113/114 (99%), Gaps = 0/114 (0%)

Query  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALITKPsffyyttyllllvslsviskyyllsHANFTMKLIMLMTQWQNWFL  114
            FLFALI KPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLI+LMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL  114

7) HP0536 in NC_000915


> AB120424|16|G16|46091568|BAD14007.1|Helicobacter_pylori_OK109|-|21380..21724|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  131 bits (480),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 110/114 (97%), Positives = 114/114 (100%), Gaps = 0/114 (0%)

Query  1    MKRPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLVALFSYGAGVILVYPIL  60
            MK+PISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFL++LFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALIIKPsffyyttyllllvslsiiskyyllsHANFTMKLIILMTQWQNWFL  114
            FLFALIIKPSFFYYTTYLLLLVSLS+ISKYYLLSHANFTMKLIILMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL  114

8) cagP in NC_000921


> AB120424|16|G16|46091568|BAD14007.1|Helicobacter_pylori_OK109|-|21380..21724|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 110/114 (97%), Positives = 114/114 (100%), Gaps = 0/114 (0%)

Query  1    MKRPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIALFSYGAGVILVYPIL  60
            MK+PISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLI+LFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALIIKPsffyyttyllllvslsiiskyyllsHANFTMKLIMLMTQWQNWFL  114
            FLFALIIKPSFFYYTTYLLLLVSLS+ISKYYLLSHANFTMKLI+LMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL  114

9) cagP in NC_011498


> AB120424|16|G16|46091568|BAD14007.1|Helicobacter_pylori_OK109|-|21380..21724|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  125 bits (459),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 110/117 (95%), Positives = 114/117 (98%), Gaps = 3/117 (2%)

Query  1    MKRPISKLSKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIALFSYGAGVILVY  60
            MK+PISKL   KQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLI+LFSYGAGVILVY
Sbjct  1    MKQPISKL---KQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVY  57

Query  61   PILFLFALIIKPsffyyttyllllvslsiiskyyllsHAKFTMKLIILMTQWQNWFL  117
            PILFLFALIIKPSFFYYTTYLLLLVSLS+ISKYYLLSHA+FTMKLIILMTQWQNWFL
Sbjct  58   PILFLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIILMTQWQNWFL  114