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Homologs of ccrB2 gene of AB096217

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) MS7_0069
( YP_005756536.1 )

resolvase, N terminal domain protein

NC_017351
(Staphylococcus aureus 11819-97)

0.0

100

2) SAKOR_00047
( YP_008490231.1 )

Site-specific recombinase

NC_022226
(Staphylococcus aureus CN1)

0.0

100

3) ccrB
( YP_492757.1 )

cassette chromosome recombinase B

NC_007793
(Staphylococcus aureus FPR3757)

0.0

100

4) ccrB
( YP_006236413.1 )

site-specific recombinase

NC_017763
(Staphylococcus aureus HO 5096 0412)

0.0

100

5) ccrB
( YP_005738212.1 )

cassette chromosome recombinase B

NC_017338
(Staphylococcus aureus JKD6159)

0.0

100

6) SAMSHR1132_00400
( YP_005324563.1 )

site-specific recombinase

NC_016941
(Staphylococcus aureus MSHR1132)

0.0

100

7) ccrB
( YP_001573963.1 )

cassette chromosome recombinase B

NC_010079
(Staphylococcus aureus TCH1516)

0.0

100

8) ccrB
( YP_005746510.1 )

site-specific recombinase

NC_017342
(Staphylococcus aureus TCH60)

0.0

100

9) ccrB
( YP_008586687.1 )

cassette chromosome recombinase B

NC_022443
(Staphylococcus aureus SA40)

0.0

10) ccrB
( YP_005740811.1 )

Cassette chromosome recombinase B

NC_017340
(Staphylococcus aureus 04-02981)

0.0

11) SaurJH1_0049
( YP_001315202.1 )

resolvase domain-containing protein

NC_009632
(Staphylococcus aureus JH1)

0.0

12) SaurJH9_0048
( YP_001245436.1 )

resolvase

NC_009487
(Staphylococcus aureus JH9)

0.0

13) ccrB
( YP_039530.1 )

site-specific recombinase

NC_002952
(Staphylococcus aureus MRSA252)

0.0

14) ccrB
( YP_001440650.1 )

cassette chromosome recombinase B

NC_009782
(Staphylococcus aureus Mu3)

0.0

15) ccrB
( NP_370585.1 )

cassette chromosome recombinase B

NC_002758
(Staphylococcus aureus Mu50)

0.0

16) ccrB
( NP_373297.1 )

cassette chromosome recombinase B

NC_002745
(Staphylococcus aureus N315)

0.0

17) SERP2499
( YP_190041.1 )

cassette chromosome recombinase B

NC_002976
(Staphylococcus epidermidis RP62A)

0.0

18) BN843_700
( YP_007867149.1 )

Cassette chromosome recombinase B

NC_021059
(Staphylococcus aureus M1)

0.0

19) CA347_58
( YP_008126942.1 )

ogr/Delta-like zinc finger family protein

NC_021554
(Staphylococcus aureus CA-347)

0.0

20) ccrB
( NP_644853.1 )

cassette chromosome recombinase B

NC_003923
(Staphylococcus aureus MW2)

0.0

21) SE0036
( NP_763591.1 )

cassette chromosome recombinase B

NC_004461
(Staphylococcus epidermidis ATCC 12228)

0.0

22) ccrB
( YP_008167247.1 )

cassette chromosome recombinase B

NC_021670
(Staphylococcus aureus Bmb9393)

0.0

23) ccrB
( YP_005743456.1 )

cassette chromosome recombinase B

NC_017341
(Staphylococcus aureus JKD6008)

0.0

24) dnaC
( YP_005751353.1 )

Cassette chromosome recombinase B3

NC_017347
(Staphylococcus aureus T0131)

0.0

25) ccrB
( YP_005730115.1 )

site-specific recombinase CcrB

NC_017331
(Staphylococcus aureus TW20)

0.0

26) ccrB3
( YP_005754051.1 )

site-specific recombinase CcrB3

NC_017349
(Staphylococcus aureus LGA251)

0.0

27) SSP0035
( YP_300125.1 )

cassette chromosome recombinase B

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

0.0

28) ccrB
( YP_042165.1 )

site-specific recombinase

NC_002953
(Staphylococcus aureus MSSA476)

0.0

29) BN843_340
( YP_007867113.1 )

Cassette chromosome recombinase B

NC_021059
(Staphylococcus aureus M1)

0.0

30) SE0056
( NP_763611.1 )

cassette chromosome recombinase B

NC_004461
(Staphylococcus epidermidis ATCC 12228)

0.0

31) BACI_c54540
( YP_003795137.1 )

DNA integration/recombination/invertion protein

NC_014335
(Bacillus cereus CI)

2e-81

32) Bsph_4747
( YP_001700321.1 )

DNA recombinase

NC_010382
(Lysinibacillus sphaericus C3-41)

5e-79

33) CLOST_2517
( YP_003937537.1 )

site-specific DNA recombinase (modular protein)

NC_014614
(Clostridium sticklandii DSM 519)

1e-77

• Sequence Alignments

1) MS7_0069 in NC_017351


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  886 bits (3354),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

2) SAKOR_00047 in NC_022226


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  886 bits (3354),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

3) ccrB in NC_017763


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  886 bits (3354),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

4) ccrB in NC_017338


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  886 bits (3354),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

5) SAMSHR1132_00400 in NC_016941


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  886 bits (3354),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

6) ccrB in NC_007793


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  886 bits (3354),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

7) ccrB in NC_010079


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  886 bits (3354),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

8) ccrB in NC_017342


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  885 bits (3352),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%)

Query  8    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  67
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  68   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  127
            RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  128  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  187
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  188  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  247
            EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  248  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  307
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  308  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  367
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  368  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  427
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  428  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  487
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  488  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  547
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  548  TI  549
            TI
Sbjct  541  TI  542

9) ccrB in NC_022443


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  880 bits (3333),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 538/542 (99%), Positives = 541/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDIMNQINQFKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDI NQINQ+KNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLTVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

10) ccrB in NC_017340


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  876 bits (3318),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 536/542 (99%), Positives = 539/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDAKEG IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIK+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDK LFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

11) SaurJH1_0049 in NC_009632


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  876 bits (3317),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 535/542 (99%), Positives = 539/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEINTS  120
            RPELQR+LKDAKEG IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERME+NTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIK+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDK LFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

12) SaurJH9_0048 in NC_009487


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  876 bits (3317),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 535/542 (99%), Positives = 539/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEINTS  120
            RPELQR+LKDAKEG IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERME+NTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIK+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDK LFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

13) ccrB in NC_002952


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  876 bits (3317),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 535/542 (99%), Positives = 539/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKDGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDAK+G IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIK+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDK LFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

14) ccrB in NC_009782


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  876 bits (3318),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 536/542 (99%), Positives = 539/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDAKEG IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIK+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDK LFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

15) ccrB in NC_002758


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  876 bits (3318),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 536/542 (99%), Positives = 539/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDAKEG IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIK+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDK LFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

16) ccrB in NC_002745


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  876 bits (3318),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 536/542 (99%), Positives = 539/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDAKEG IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIK+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDK LFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

17) SERP2499 in NC_002976


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  876 bits (3317),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 535/542 (99%), Positives = 539/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKDGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDAK+G IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIK+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDK LFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

18) BN843_700 in NC_021059


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  873 bits (3307),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 529/542 (98%), Positives = 540/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMIYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQRMLKDAKEGNIDCVM+YKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVARVNQENKVDGAALHHDIAYKQQQYDEVQTKLNNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVV++VNQEN+VDGAALHHDIAYKQQQYDEVQ K+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKSLFDAKQISKLLQHIFQDIKHMEKSRLK  480
            SVIRPSIQKYEKQLNDITNQINQLKNQQNEDK+LFDAK+ISKLLQHIF+DIKH+EKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRINIRKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRI+I+KDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

19) CA347_58 in NC_021554


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  867 bits (3285),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 533/543 (99%), Positives = 537/543 (99%), Gaps = 1/543 (0%)

Query  1    MQQLKTKRVGIYVRVSTKMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVST MQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDAKEG IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHIVVAYKQQQYDEVQIKLNNLIKTIEDNPDL  420
            LEIVKSDKVIQRVVTHVNQENQVDGAALHH  +AYKQQQYDEVQIK+NNLIKTIEDNPDL
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHH-DIAYKQQQYDEVQIKINNLIKTIEDNPDL  419

Query  421  TSVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRL  480
            TSVIRPSIQKYEKQLNDITNQINQLKNQQNEDK LFDAKEISKLLQHIFHDIKHIEKSRL
Sbjct  420  TSVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRL  479

Query  481  KALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLY  540
            KALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLY
Sbjct  480  KALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLY  539

Query  541  LTI  543
            LTI
Sbjct  540  LTI  542

20) ccrB in NC_003923


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  866 bits (3278),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 528/542 (98%), Positives = 538/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRILKDAKDGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDAK+G IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRANVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRA+VIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKIIERVVARVNQENQVDCASLHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
            LEIVKSDK+I+RVV++VNQENQVD A+LHHDIAYKQQQYDEVQIK+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITYQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            SVIRPSIQKYEKQLNDIT QINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

21) SE0036 in NC_004461


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  829 bits (3138),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 499/542 (93%), Positives = 527/542 (98%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKFMN  60
            MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGK MN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMIYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQRMLKDAKEGNIDCVM+YKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWNKVQIRKKQVSQKPQVHGKGTNLLTGII  300
            YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLW+KVQ+RKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIQRVVARVNQENQVDCASLHHDIAYKQQQYDEVRIKLNNLIKTIEDNPDLT  420
            LEIVKSDKVIQRVV++VNQENQVD A+LHHDIAYKQQQYDEV+IK+NNLIKTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVIRPSIQKYDKQLNDIMSQINQLKKQQNEDKPSYNAKKIGKILRYVFHNIEKMKKSQLK  480
            SVIRPSIQKY+KQLNDI +QINQLK+QQNEDK  ++AK I+K+L+ +FH+I  + KS+LK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLAVIDRIDIRKDSNHKKQFYVTLKLDNEVIKQVFNDIPLDEVLLSTSSLFLPQPFYL  540
            ALYL+VIDRIDI+KD+NHKKQFYVTLKL+NE+IKQ+FN+  LDEV LSTSSLFLPQ +YL
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  TI  542
            TI
Sbjct  541  TI  542

22) ccrB in NC_021670


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  780 bits (2953),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEIQSTEGYSIDGQINQIREYCDFNNFVVVDVYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTE+QSTEGYSIDGQINQI+EYCDF++F V D+YADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRLLKDANEGQIDSVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+ID VMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSIGSVTYILSNPFYVGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSI+S+TYIL+NPFY+GKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWNEKRRKGLNDKPIIAEGKHSPIIIQDLWDKVQLRKKQVSQKPQVHGKGTNLLTGIV  300
            YKDW+EKRRKGLNDKP+IAEGKHSPII QDLWDKVQ+RKKQVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVINQVLERVNQENKVDIGALNHDIAYKQQQYDEVSGKLHNLVKTIEDNPDLT  420
            LEIVKSDKVI++V+ +VNQEN+VD +AL+HDIAYKQQQYDEV  K++NL+KTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SALKATIHQYETQLNDITnqmnqlkqqqnqEKLSYDTKQIAALLQRIFQNIESMDKAQLK  480
            S ++++I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLTVIDRIDIRKDGNHKKQFYVTLKLNNEIIKQLFNNTPLDEVLLSTSSLFLPQTLFL  540
            ALYL+VIDRIDI+KDGNHKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTL+L
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  QI  542
             I
Sbjct  541  TI  542

23) ccrB in NC_017341


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  780 bits (2953),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEIQSTEGYSIDGQINQIREYCDFNNFVVVDVYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTE+QSTEGYSIDGQINQI+EYCDF++F V D+YADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRLLKDANEGQIDSVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+ID VMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSIGSVTYILSNPFYVGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSI+S+TYIL+NPFY+GKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWNEKRRKGLNDKPIIAEGKHSPIIIQDLWDKVQLRKKQVSQKPQVHGKGTNLLTGIV  300
            YKDW+EKRRKGLNDKP+IAEGKHSPII QDLWDKVQ+RKKQVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVINQVLERVNQENKVDIGALNHDIAYKQQQYDEVSGKLHNLVKTIEDNPDLT  420
            LEIVKSDKVI++V+ +VNQEN+VD +AL+HDIAYKQQQYDEV  K++NL+KTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SALKATIHQYETQLNDITnqmnqlkqqqnqEKLSYDTKQIAALLQRIFQNIESMDKAQLK  480
            S ++++I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLTVIDRIDIRKDGNHKKQFYVTLKLNNEIIKQLFNNTPLDEVLLSTSSLFLPQTLFL  540
            ALYL+VIDRIDI+KDGNHKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTL+L
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  QI  542
             I
Sbjct  541  TI  542

24) dnaC in NC_017347


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  780 bits (2953),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEIQSTEGYSIDGQINQIREYCDFNNFVVVDVYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTE+QSTEGYSIDGQINQI+EYCDF++F V D+YADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRLLKDANEGQIDSVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+ID VMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSIGSVTYILSNPFYVGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSI+S+TYIL+NPFY+GKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWNEKRRKGLNDKPIIAEGKHSPIIIQDLWDKVQLRKKQVSQKPQVHGKGTNLLTGIV  300
            YKDW+EKRRKGLNDKP+IAEGKHSPII QDLWDKVQ+RKKQVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVINQVLERVNQENKVDIGALNHDIAYKQQQYDEVSGKLHNLVKTIEDNPDLT  420
            LEIVKSDKVI++V+ +VNQEN+VD +AL+HDIAYKQQQYDEV  K++NL+KTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SALKATIHQYETQLNDITnqmnqlkqqqnqEKLSYDTKQIAALLQRIFQNIESMDKAQLK  480
            S ++++I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLTVIDRIDIRKDGNHKKQFYVTLKLNNEIIKQLFNNTPLDEVLLSTSSLFLPQTLFL  540
            ALYL+VIDRIDI+KDGNHKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTL+L
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  QI  542
             I
Sbjct  541  TI  542

25) ccrB in NC_017331


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  780 bits (2953),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEIQSTEGYSIDGQINQIREYCDFNNFVVVDVYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTE+QSTEGYSIDGQINQI+EYCDF++F V D+YADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRLLKDANEGQIDSVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+ID VMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSIGSVTYILSNPFYVGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKGKPFSI+S+TYIL+NPFY+GKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWNEKRRKGLNDKPIIAEGKHSPIIIQDLWDKVQLRKKQVSQKPQVHGKGTNLLTGIV  300
            YKDW+EKRRKGLNDKP+IAEGKHSPII QDLWDKVQ+RKKQVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVINQVLERVNQENKVDIGALNHDIAYKQQQYDEVSGKLHNLVKTIEDNPDLT  420
            LEIVKSDKVI++V+ +VNQEN+VD +AL+HDIAYKQQQYDEV  K++NL+KTIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SALKATIHQYETQLNDITnqmnqlkqqqnqEKLSYDTKQIAALLQRIFQNIESMDKAQLK  480
            S ++++I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLTVIDRIDIRKDGNHKKQFYVTLKLNNEIIKQLFNNTPLDEVLLSTSSLFLPQTLFL  540
            ALYL+VIDRIDI+KDGNHKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTL+L
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  QI  542
             I
Sbjct  541  TI  542

26) ccrB3 in NC_017349


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  779 bits (2949),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  REIVKSDTviqqvvervnqenqvdvAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ KI+NL++TI+DNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  QI  542
             I
Sbjct  541  TI  542

27) SSP0035 in NC_007350


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  766 bits (2897),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 453/542 (84%), Positives = 511/542 (95%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEMQSAEGYSIDGQINQIKEYCNFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQS+EGYSIDGQINQIKEYC+FHHFEVKDIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  61   RPALQRMLHDANKGHIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RP LQRML DA+ G+IDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNTILENIYTGQHQRALEGYYQGNLPLGYNNIPDNKKDLMINQH  180
            SGKLMLQILASFSEFERN I+EN++ GQ +RA EGYYQGNLPLGY++IPD+K +LMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGNPFSISAVTYILSNPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKG+PFSIS++TYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  241  YKDWNDKRRKGLNDKPVIAEGKHAPIIGKDLWDKVQARKKQVSEKPQVHGKGTNILTGLI  300
            YKDW++KRRKGLNDKPVIAEGKH+PII +DLWDKVQ RKKQVS+KPQVHGKGTN+LTG+I
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  301  SCPQCSASMSASTTVNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  360
             CPQC+A+M+AS T NTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  361  LEIVKSDKVIKQVVERVNQEHQIDMAALNHDIAYKQQQYDEVQIKLDNLIKTLEDNPDLT  420
            LEIVKSDKVI++VV +VNQE+Q+D AAL+HDIAYKQQQYDEVQIK++NLIKT+EDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  421  SVLKNTIHQYEKQLNDittqinqlkqqqnqEKPSYDTKQIAALLQQIFQNVESMDKVQLK  480
            SV++ +I++YEKQLNDIT QINQLK+QQN++K  +D+K+I+ LLQ+IF+++  ++K +LK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  481  ALYLTVIDRIDIRKDGNHKKQFYVTLKLNNEIIKQLFNDTPLDEVLLSTSSLFLPQTLFL  540
            ALYL+VIDRIDI+KDGNHKKQFYVTLKLNNEIIKQLFN+  LDEV LSTSSLFLPQTL+L
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  541  QI  542
             I
Sbjct  541  TI  542

28) ccrB in NC_002953


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  712 bits (2692),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 437/542 (81%), Positives = 507/542 (94%), Gaps = 1/542 (0%)

Query  1    MDKMKKKLVGGYIRVSTERQ-VEGYSIEGQITQIEQYCQFNGYELVDIYADRGISGKSMN  59
            M+++K K VG Y+RVSTE Q  EGYSI+GQI QI +YC+F+ +E+ DIYADRGISGKSMN
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  60   RPELQRMLNDAKNGKLDCVMVYKTNRLARNTSDLLTIVEELHRQNVEFFSLSERMEVKNS  119
            RPELQRML+DAK+G++DCVMVYKTNRLARNTSDLL IVE+LH+QNVEFFSLSERMEV+ S
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  120  TGKLMLQILASFSEFERNTILENIYNGQHQRALKGYYQGNLPLGYNNIPDNKKELMINQH  179
            +GKLMLQILASFSEFERN I+EN++ GQ +RA  GYYQGNLPLGY++IPD+K ELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  180  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGNPFSINSITYILVNPFYIGKIQFAK  239
            EANIVKYIFE YAKGHGYRKIANALNHKGYVTKKG+PFSI+SITYIL NPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  240  YKDWNEKRRKGLNDKPIIADGKHPPIISQELWDkvqsrkkqvsqkpqvHGKGTNLLTGII  299
            YKDW+EKRRKGLNDKP+IA+GKH+PII+Q+LWDKVQ RKKQVSQKPQVHGKGTNLLTGII
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  300  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  359
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  360  LEIVKSDKVLKQVVERVNQDNQVDVAALNHDIAYKQQQFDEVNIKLKNLVQTIEDNPDLT  419
            LEIVKSDKV+++VV +VNQ+NQVD AAL+HDIAYKQQQ+DEV+IK++NL++TIEDNPDLT
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  420  SALKPTIHQYETKLNDITnqmnqlkqqqnqEKPSYDTKQIAALLQRIFQNIESMDKSQLK  479
            S ++P+I++YE +LNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++KS+LK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  480  ALYLTVIDRIDIRKDENHKKQFYVTLKLNNEIIKQLFNNNNLDEVLLSTSSLFLPQTLYF  539
            ALYL+VIDRIDI+KD NHKKQFYVTLKLNNEIIKQLFNN++LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  540  QI  541
             I
Sbjct  541  TI  542

29) BN843_340 in NC_021059


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  706 bits (2669),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 394/542 (73%), Positives = 487/542 (90%), Gaps = 1/542 (0%)

Query  1    MKQLKKKRIGLYARVSTEMQ-TDGYSIQGQLNQLTEYCQFQGYEVVNEYTDRGISGKTMQ  59
            M+QLK KR+G+Y RVSTEMQ T+GYSI+GQ+NQ+ EYC+F+ +EV + Y+DRGISGK+M+
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  60   RPELQRMLKDANEGKLDCIMVYKTNRLARNTSDLLNIVEELYKINVEFFSLTEKIEIASS  119
            RPELQRMLKDA+EG++DC+MVYKTNRLARNTSDLL+IVE+L K NVEFFSL+E++E+ +S
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  120  TGKLMLQILASFAEFERNTIVENVYNGQRQRAIEGYYQGNLPLGYDKVPDSKKELMINQH  179
            +GKLMLQILASF+EFERN IVENV+ GQ +RA EGYYQGNLPLGYDK+PDSK ELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  180  EANIVKYIFDSYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYIISNPFYIGKIQFAK  239
            EANIVKYIF+ YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYI++NPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  240  YRHWSDKRRKGLNEEPIIADGKHAPIIDRNLWDKVQFKRQESRKKPQVHGKGTNLLTGIV  299
            Y++WS+KRRKGLN+ P+IA+GKH+PII+++LWDKVQ ++++  +KPQVHGKGTNLLTGI+
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  300  KCPKCGAAMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVLEKYVMDQI  359
             CP+CGA+MAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADV+E YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  360  LEIIKSKKVLKQLVEKVNEKSQIDVSSLNHDIAYKQSQCEEIKAKMHTLTKTIEDSPDLD  419
            LEI+KS KV++++V  VN+ +Q+D ++L+HDIAYKQ Q +E++ K++ L KTIED+PDL 
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  420  SVLKPTILSYQDELNQINNQIYQLEQDKQAEAPHYDADMIANVLQAIFKDIDKLEKSQLK  479
            SV++P+I  Y+ +LN+I NQI QL ++++ +   +DA  I+++LQ IF DI  +EKS+LK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  480  SLYLTIIDRIDIRKDEHHKKQFYVTLKLNNDIIKQLFNNHPLDEVLPSTSSLFLPQTLYI  539
            +LYL++IDRIDI+KD +HKKQFYVTLKLNN+IIKQLFNN  LDEV  STSSLFLPQTLY+
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  540  TI  541
            TI
Sbjct  541  TI  542

30) SE0056 in NC_004461


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  705 bits (2666),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/542 (73%), Positives = 486/542 (90%), Gaps = 1/542 (0%)

Query  1    MKQLKKKRIGLYARVSTEMQ-TDGYSIQGQLNQLTEYCQFQGYEVVNEYTDRGISGKTMQ  59
            M+QLK KR+G+Y RVSTEMQ T+GYSI+GQ+NQ+ EYC+F+ +EV + Y+DRGISGK+M+
Sbjct  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60

Query  60   RPELQRMLKDANEGKLDCIMVYKTNRLARNTSDLLNIVEELYKINVEFFSLTEKIEIASS  119
            RPELQRMLKDA+EG++DC+MVYKTNRLARNTSDLL+IVE+L K NVEFFSL+E++E+ +S
Sbjct  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120

Query  120  TGKLMLQILASFAEFERNTIVENVYNGQRQRAIEGYYQGNLPLGYDKVPDSKKELMINQH  179
            +GKLMLQILASF+EFERN IVENV+ GQ +RA EGYYQGNLPLGYDK+PDSK ELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  180  EANIVKYIFDSYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYIISNPFYIGKIQFAK  239
            EANIVKYIF+ YAKGHGYRKIANALNHKGYVTKKGKPFSISSITYI++NPFYIGKIQFAK
Sbjct  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240

Query  240  YRHWSDKRRKGLNEEPIIADGKHAPIIDRNLWDKVQFKRQESRKKPQVHGKGTNLLTGIV  299
            Y++WS+KRRKGLN+ P+IA+GKH+PII+++LWDKVQ ++++  +KPQVHGKGTNLLTGI+
Sbjct  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300

Query  300  KCPKCGAAMEASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVLEKYVMDQI  359
             CP+CGA+M ASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADV+E YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  360  LEIIKSKKVLKQLVEKVNEKSQIDVSSLNHDIAYKQSQCEEIKAKMHTLTKTIEDSPDLD  419
            LEI+KS KV++++V  VN+ +Q+D ++L+HDIAYKQ Q +E++ K++ L KTIED+PDL 
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420

Query  420  SVLKPTILSYQDELNQINNQIYQLEQDKQAEAPHYDADMIANVLQAIFKDIDKLEKSQLK  479
            SV++P+I  Y+ +LN+I NQI QL ++++ +   +DA  I+++LQ IF DI  +EKS+LK
Sbjct  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480

Query  480  SLYLTIIDRIDIRKDEHHKKQFYVTLKLNNDIIKQLFNNHPLDEVLPSTSSLFLPQTLYI  539
            +LYL++IDRIDI+KD +HKKQFYVTLKLNN+IIKQLFNN  LDEV  STSSLFLPQTLY+
Sbjct  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540

Query  540  TI  541
            TI
Sbjct  541  TI  542

31) BACI_c54540 in NC_014335


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  296 bits (1108),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 198/470 (43%), Positives = 319/470 (68%), Gaps = 7/470 (1%)

Query  3    QVVIYARVSTAEQAEEGYSIDAQLDVVKKRCEQEGRIVVDNYVDRGISGKAMGNRAELQR  62
            +V IY RVST  Q+ EGYSID+Q++ +K  C+ +   V D Y DRGISGK+M NR+ELQR
Sbjct  8    RVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSM-NRPELQR  66

Query  63   LLRDAGENKFQEIWVWKTNRLARNHLDLLKIVDELNKNNVGFKSCSEAFDTATPTGKLLM  122
            +L+DA E +++ + V KTNRLARN  DLLKIV++L+K+NV F S SE  +  T++GKL++
Sbjct  67   MLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTSSGKLML  126

Query  123  NVLASIGEFERESIVENVKMGMKQRAREGKWNGGIVLGYNTVKIDKTENKTKLEVEEKEA  182
            ++LAS++EFER++IVENV MG  +RA+EG  +G + LGY+ +     ++K  L +++ EA
Sbjct  127  QILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKI----PDSKHELMINQHEA  182

Query  183  YIVKEIFKLYAEGRGLKAITNLVNKLGYRTKRGNFFTPIAIRTILLNPIYIGKIRYNVRE  242
             IVK IF  YA G+G + I+N +N  GY TK+G+ F+  +I  IL NP+YIGKI++    
Sbjct  183  NIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAKYK  242

Query  243  NWSEKRRKGINENPIYTNGNHDPIISLDLWNRVQELYKKKSQKPKRLFDGTFPLTGLIKC  302
            +WSEKRRKG+N++P+ ++G+H PII+ DLW++VQ   K+ SQKP+    GT  LTG+I C
Sbjct  243  DWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGIIHC  302

Query  303  PMCGASMVAGRVKRKLKDGNINIIRYYQCGAWRNKGTAACRSNGVRADKIEKQVFKRINQ  362
            P CGA+M A+     LKDG  + IRYY C+  RNKG+  C +N+VRAD IE  V K+I +
Sbjct  303  PQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQILE  362

Query  363  IVLNDKILKDTVSKLNDNTHNKIKPLEEALNITNKKIQNFEKKKSRIFDLYEEGTIAKEV  422
            IV +DK+++  V+ +N++ +    +L++ +   +++ ++ + K + ++   E+      V
Sbjct  363  IVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLTSV  422

Query  423  LTSRLEHISNEIQMNFVQKISIEKELKQNTSNPIPVDTVKKLLIR-FHHL  471
            + + ++   ++++ ++ ++I+  K+ +++    +    + KLL + FH++
Sbjct  423  IRPSIQKYEKQLN-DITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDI  471

32) Bsph_4747 in NC_010382


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  288 bits (1078),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 208/503 (42%), Positives = 342/503 (68%), Gaps = 18/503 (3%)

Query  15   RRIAIYARVSTTEQAEEGYSIDEQIRVLKEYCEDNGYFVFEEYIDRGISGKNITGRPAVQ  74
            +R++IY RVST  Q+ EGYSID QI  +KEYC+ + + V + Y DRGISGK++  RP +Q
Sbjct  7    KRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSM-NRPELQ  65

Query  75   RMLQDAEQKKLDVVLVWKMNRLARKMVDLMNIVELLNSKNIAFRSHTERYETETPTGKLQ  134
            RML+DA + ++D V+V K NRLAR+  DL++IVE L+ +N+ F S +ER E +T++GKL 
Sbjct  66   RMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTSSGKLM  125

Query  135  FQMMAAIAEYERNNIAENVKMGMIARAKEGKWNGGQVLGYDIVQIPDANKKRKNTQLVIN  194
            +Q++A+++E+ERNNI ENV MG   RA+EG  +G   LGYD  +IPD++      +L+IN
Sbjct  126  LQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYD--KIPDSKH-----ELMIN  178

Query  195  EKEAEIVQYIFNMYTSGHGYKAIANHINkkgfltkkgktfSLNAIKTIVTNPVYTGYIRY  254
            + EA+IV+YIF+ Y+ GHGY+ IAN +N KG++TKKGK FS+++I  I++NP Y G I++
Sbjct  179  QHEANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQF  238

Query  255  NVRRDWNEKRRNNINPDPVIQKADHSPIITEEMWSIAKGIFERRSGLPNRVHD-GEFPLT  313
               +DW+EKRR+ +N  PVI  + HSPII +++W   + +  ++ +   +VH+ G   LT
Sbjct  239  AKYKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQ-MRKKQVSQKPQVHGKGTNLLT  297

Query  314  GIMRCPICDAGMVIGRTTNTLKDGTKKVLEYYVCGAWKNKGTLVCRSNGVRTDKADAYVF  373
            GI++CP C+A M  + TTNTLKDGTKK + YY C+  +NKG+ VC +N+VR+D  + YV 
Sbjct  298  GIIHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVM  357

Query  374  SKLQTLMQSDKLIQELVNNVNQRNEKLFAPIQKEHAFYQKQMQELEHKRGKTFDAYTEEL  433
             ++  +++SDK+IQ +V +VNQ N+   A+++ + A+ Q+Q +E++ K  + + +  ++ 
Sbjct  358  KQILEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNP  417

Query  434  IPKSLYIEKANALDKQIAELNERMKPLNRQMQGNSGETIAPEAIRKILKDFSKAFEQALT  493
               S+     +  +KQ+ ++ ++++ L+ Q Q +    + +  I K+L+++   F + + 
Sbjct  418  DLTSVIRPSIQKYEKQLNDITNQINQLKNQ-QNEDKTLFDAKEISKLLQHI---F-HDIK  472

Query  494  REQRKRLLHL---IINKITINED  513
            + ++ RL  L   +I++I I+ D
Sbjct  473  HIEKSRLKALYLSVIDRIDIKKD  495

33) CLOST_2517 in NC_014614


> AB096217|16|G14|29539365|BAC67561.1|Staphylococcus_aureus_81/108(MR108)|+|13952..15580|ccrB2|-|cassette 
chromosome recombinase 
B2
Length=542

 Score =  283 bits (1060),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 171/388 (45%), Positives = 275/388 (71%), Gaps = 5/388 (1%)

Query  13   LKQYRAGVYIRVSTHEQAEHGFSLEGQDEHTEKYADLFNMEIVEKYIDSGISGKSMEARP  72
            LK  R G+Y+RVST+ Q+ +G+S++GQ ++   Y D+ + E+ + Y D GISGKSM+ RP
Sbjct  4    LKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN-RP  62

Query  73   ALQRMIRDVKDGKLDKIITWKVSRIARNNRDLLNLLKILNDHEVALISISEGIDTSSMMG  132
             LQRM++D K+G++D ++  K +R+ARN  DLL+++  L+ ++V ++S+SE ++ ++  G
Sbjct  63   ELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTSSG  122

Query  133  KMMLQFLGIMAEFERYTIIENVKMGMERRTKLGLKNGGRMLGYRSVGEGRESKLVIDERE  192
            K+MLQ+L+  +EFER  I+ENV MG  RR++ G  +G   LGY  + ++++  L+I+++E
Sbjct  123  KLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHE-LMINQHE  181

Query  193  AEIVSLIFKLYISGKGYKAIANDLNKKGHKTVKGNNFSITAVKGILENPTYIGKIRYNQY  252
            A+IV  IF  Y  G GY+ IAN LN KG  T KG+ FSI+++  IL NP YIGKI++ +Y
Sbjct  182  ANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAKY  241

Query  253  VDYANKRRKGKNDDVLLVDGVHEAIIDEITWNQARYIQskktknstkntGKYP--LTGIL  310
             D ++KRRKG ND  ++ +G H +II++  W++ + ++ K+  +  +  GK    LTGI+
Sbjct  242  KDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQ-MRKKQVSQKPQVHGKGTNLLTGII  300

Query  311  RCPECGYGMVAAGTTNKLKDGTSKRIRYYSCGQFHNKGSAVCHANSVRAEYAEAYVFEQV  370
            +CP+CG  M A+ TTN LKDGT KRIRYYSC++F+NKGS VC ANSVRA+  E YV  Q+
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360

Query  371  SQFLNNDGLIKKIVKKLNHDRKAGIAPM  398
             +++++D +I+++V  +N++ + + A++
Sbjct  361  LEIVKSDKVIQRVVTHVNQENQVDGAAL  388