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PAthogenisity Island DataBase (PAI DB)

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Homologs of virD2-1 gene of NC_011498_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) virD2-1
( YP_002301087.1 )

relaxase

NC_011498
(Helicobacter pylori P12)

0.0

100

2) HPAKL117_06620
( YP_007017844.1 )

hypothetical protein

NC_019560
(Helicobacter pylori Aklavik117)

0.0

3) HPB8_501
( YP_003728522.1 )

hypothetical protein

NC_014256
(Helicobacter pylori B8)

0.0

4) HPSNT_00380
( YP_005786242.1 )

relaxase

NC_017376
(Helicobacter pylori Santal49)

0.0

5) K751_06590
( YP_007984276.1 )

relaxase

NC_021218
(Helicobacter pylori UM066)

0.0

6) virD2-1
( YP_006331082.1 )

relaxase

NC_017919
(Helicobacter pylori XZ274)

0.0

7) virD2-1
( YP_006338262.1 )

relaxase

NC_017926
(Helicobacter pylori XZ274)

0.0

8) HPG27_976
( YP_002266595.1 )

hypothetical protein

NC_011333
(Helicobacter pylori G27)

0.0

9) HPSA_04645
( YP_005771518.1 )

hypothetical protein

NC_017361
(Helicobacter pylori SouthAfrica7)

0.0

10) virD2-1
( YP_005777013.1 )

hypothetical protein

NC_017367
(Helicobacter pylori F57)

0.0

11) HPPC_07770
( YP_003927808.1 )

hypothetical protein

NC_014555
(Helicobacter pylori PeCan4)

0.0

12) HPSH112_07005
( YP_006228079.1 )

hypothetical protein

NC_017741
(Helicobacter pylori Shi112)

0.0

13) HPSH169_01150
( YP_006225428.1 )

hypothetical protein

NC_017740
(Helicobacter pylori Shi169)

0.0

14) HPCU_01285
( YP_005766349.1 )

hypothetical protein

NC_017358
(Helicobacter pylori Cuz20)

0.0

15) HPSH_04530
( YP_001910371.1 )

hypothetical protein

NC_010698
(Helicobacter pylori Shi470)

0.0

16) HPSH417_05615
( YP_006224745.1 )

hypothetical protein

NC_017739
(Helicobacter pylori Shi417)

0.0

• Sequence Alignments

1) virD2-1 in NC_011498


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score = 1003 bits (3800),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 637/637 (100%), Positives = 637/637 (100%), Gaps = 0/637 (0%)

Query  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60
            MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120
            REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180
            KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240
            VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300
            ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360
            EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420
            ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480
            EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540
            KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600
            TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637
            TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

2) HPAKL117_06620 in NC_019560


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  930 bits (3525),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 594/637 (94%), Positives = 620/637 (98%), Gaps = 1/637 (0%)

Query  1    MALEKSYSKNFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLKQEEFMRL  60
            MALEKSYSK+FESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQL QEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  61   REPQKQVIIKNIGNMTRLHSKMAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE  120
            REPQKQV+IKNIGNMTRLHSK AMDY AKHGELVRDEFFNEVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  121  NKSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  180
            ++SRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  181  VIINKTNRITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKVIKDI  240
            VIINKTN+ITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+ IK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  241  ETELDTLEKQARNNKSFRHENYFYKVLGSATSQIESLKKKENAlsdhldslksllEKTHW  300
            ETELD+LEKQARNNKSFRHENYFYKVLGSATSQIESLKK+ENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  301  EKEKFTPPINEKELNQQLKEIKWLNKESLTPKNSYKKTQKLVVCKSPLIKDYLYTTKKLF  360
            EKE+FTPP NEKELN+QLKEIKWLNKESLTPK++YKKTQKLVVCKSPLIKD LYTTKKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEADLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420
            ATQKKIIDLEKDYKDLKVLKEEFSKDLE +LSHSKKRFELYTRLKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  421  EKIALDFKSDRHSISQRAFEFFRYMNYQNLSLTDKDNMFLAAKFFKDSALLVNIARFEMK  480
            EKIALDFKSDRHSI+QRAFEFFRYMNYQNLSLT+K NMFL AKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  481  KIDNSVKNSNPQGNLLDKQAWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540
            KID+SVKNS+PQGNLLDKQ WLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLVKSASIALENLQSNHQITAV  600
            TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQ+NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  601  TQTAQENTNALKNTT-QDFNKTTNEPINPNNNHEMDF  636
            TQ  QENTNALK+   +DFNKTTNEPINPNNN EMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

3) HPB8_501 in NC_014256


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  929 bits (3521),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 595/630 (95%), Positives = 618/630 (99%), Gaps = 0/630 (0%)

Query  2    GKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRLREPQKQV  61
            +KDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRLREPQKQV
Sbjct  8    SKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRLREPQKQV  67

Query  62   VIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLENKSRVKN  121
            VIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFE++LE++SRVKN
Sbjct  68   VIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILEKNSRVKN  127

Query  122  CALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAHVIINKTN  181
            CALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAHVIINKTN
Sbjct  128  CALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAHVIINKTN  187

Query  182  KITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYTAIKNIETELDAL  241
            KITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY AIKNIETELDAL
Sbjct  188  KITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNIETELDAL  247

Query  242  EKQARNNKSFRHENYFYKVFGSATSQIDSLKKRENAlldhldslknllEKTHWEKENFTP  301
            EKQARNNKSFRHENYFYKV+GSATSQI+SLKKRENAL DHLD+LK+LLEKTHWEKENFTP
Sbjct  248  EKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHWEKENFTP  307

Query  302  PINEKELNRQLKEIKWLNKESLTPKNTYKKTQKLVVCKSRLIKDYLYTTKKLFTTQKKII  361
            P NEKELNRQLKEIKWLNKESLTPK+TYKKTQKLVVCKS LIKD LYTTKKLF+TQKKII
Sbjct  308  PTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLFATQKKII  367

Query  362  DLEKDYKNLKVLKEEFSKDLETDLSHSKKRFELYTKLKSMSKVFTSKNIVKNLEKIALDF  421
            DLEKDYK+LKVLKEEFSKDLE +LSHSKKRFELYT+LKSMSKVF SK+IVKNLEKIALDF
Sbjct  368  DLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNLEKIALDF  427

Query  422  KSDRHSISQRAFEFFRYMNYQNLSLIDKGNMFLVAKFFKDSALLVNIARFEMKKIDDSVK  481
            KSDRHSI+QRAFEFFRYMNYQNLSL +K+NMFLVAKFFKDSALLVNIARFEMKKIDDSVK
Sbjct  428  KSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMKKIDDSVK  487

Query  482  NSNPQDNLLDKQAWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFLTQANEND  541
            NS+PQ+NLLDKQ WLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFLTQANEND
Sbjct  488  NSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFLTQANEND  547

Query  542  LPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIALENLQNNHQITAVTQDTQEN  601
            LPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQNNHQITAVTQD QEN
Sbjct  548  LPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAVTQDKQEN  607

Query  602  TNALKKIPLKDFNKTTNELISPNNNYEMDF  631
            TNALKKIPLKDFNKTTNE I+PNNNYEMDF
Sbjct  608  TNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

4) HPSNT_00380 in NC_017376


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  929 bits (3521),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 597/637 (94%), Positives = 624/637 (98%), Gaps = 1/637 (0%)

Query  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIRYTYAKRYYKEVEKFAKNSTQLTQEEFMRL  60
            MALEKSYSKDFESDELFDYEIIKPKKTLKI+YTYAKRYYKEVEKFAKN TQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  61   RDPQKQVVIKNIGNMTRLHSKRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE  120
            R+PQKQVVIKNIGNMTRLHSKRAMDY AKHGELVRDEFFNEVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  121  NNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  180
            +NSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  181  VIINKTNKITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKDI  240
            VIINKTNKITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+AIK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  241  ETELDTLEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENAlsdhldslksllEKTHW  300
            ETELD+LEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  301  EKENFTPPTNEKEFNQQLKEIKWLNKESLTPKNTYKKIQKLAVCKSPLIKDYLYTTKKLF  360
            EKENFTPPTNEKE+N+QLKEIKWLNKESLTPK+TYKK QKL VCKSPLIKD LYTTKKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  361  ATQKKIRDLEKDYKDLKVLKEEFSKDLETDLSHSKKRFELYAKLKSMSKVFISKSIVKNL  420
            ATQKKI DLEKDYKDLKVLKEEFSKDLE +LSHSKKRFELY++LKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  421  EKIALDFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  480
            EKIALDFKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  481  KIDDSVKNSNPQDNLLDKQAWLSLLEHLKRLEEENYCFAKKRKEFLETRSMELSKDLKFL  540
            KIDDSVKNS+PQ+NLLDKQ WL+LLEHLKRLEEENYCFAKKRKEFLETR+MELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIALENLQRNHQITAV  600
            TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQ NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  601  TQDTQENTNALKNTA-QDFNKTTNEPINPNNNYEMDF  636
            TQD QENTNALK+ + +DFNKTTNEPINPNNNYEMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

5) K751_06590 in NC_021218


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  923 bits (3496),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 593/637 (94%), Positives = 621/637 (98%), Gaps = 1/637 (0%)

Query  1    MALEESYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKHSTQLTQEEFMRL  60
            MALE SYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAK+ TQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  61   RDPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE  120
            R+PQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  121  NNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  180
            +NSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  181  VIINKTNKITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKDI  240
            VIINKTNKITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+AIK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  241  ETELDTLEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENAlsdhldslksllEKTHW  300
            ETELD+LEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  301  EKENFTPPTNEKEFNQQLKEIKWLNKESLTPKNTYKKIQKLAVCKSPLIKDYLYTTKKLF  360
            EKENFTPPTNEKE+N+QLKEIKWLNKESLTPK+TYKK QKL VCKSPLIKD LYTTKKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  361  ATQKKIRDLEKDYKDLKILKEEFSKDLEADLSHSKKRFGLYTKLKSMSKVFISKSIVKNL  420
            ATQKKI DLEKDYKDLK+LKEEFSKDLE +LSHSKKRF LYT+LKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  421  EKIALDFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDNALLVNIARFEMK  480
            EKIALDFKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKD+ALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  481  KIDDSVKNSNPQDNLSDKQAWLNLLEHLKRLEEKNYCFAKKRKEFLETRSMELSKDLKFL  540
            KIDDSVKNS+PQ+NL DKQ WLNLLEHLKRLEE NYCFAKKRKEFLETR+MELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIALENLQRNHQITAV  600
            TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQ NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  601  TQDTQENTNAFKNTA-QDFNKTTNEPINPNNNYEMDF  636
            TQD QENTNA+K+ + +DFNKTTNEPINPNNNYEMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

6) virD2-1 in NC_017919


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  918 bits (3476),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 593/637 (94%), Positives = 620/637 (98%), Gaps = 1/637 (0%)

Query  1    MALEKSYSKNFEGDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60
            MALEKSYSK+FE+DELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  61   REPQKQVVIKNIGNMTRLHLKRAMDYIAKHGDLVRDEFFTEVNYNDIAEQWNEQFEKLLE  120
            REPQKQVVIKNIGNMTRLH KRAMDY AKHG+LVRDEFF EVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  121  NKSRVKNCALHLVFSIDENCNEKNLKVLELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  180
            ++SRVKNCALHLVFSIDENCNEKNLK LELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  181  VIINKTNRITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKDI  240
            VIINKTN+ITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+AIK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  241  ETELDTLEKQARNNKGFRHENYFYKVLGSATSQIESLKKRENAlsdhldslksllEKTHW  300
            ETELD+LEKQARNNK+FRHENYFYKVLGSATSQIESLKKRENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  301  EKEKFTPPINEKELNQQLKEIKWLNKESLTPKNTYKKTQKLVVCKNPLIKDYLYTTEKLF  360
            EKE+FTPP NEKELN+QLKEIKWLNKESLTPK+TYKKTQKLVVCK+PLIKD LYTT KLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  361  ATQKKIIDLEKNYKDLKVLKEEFSKDLEADLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420
            ATQKKIIDLEK+YKDLKVLKEEFSKDLE +LSHSKKRFELYTRLKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  421  EKIALDFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  480
            EKIALDFKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  481  KIDDSVKNSSPQGNLLDKQAWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540
            KIDDSVKNSSPQGNLLDKQ WLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASITLENLQSNHQITAV  600
            TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASI+LENLQ+NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  601  TQDMQENTNALknttkdf-nkttnEPINPNNNYEMDF  636
            TQD QENTNALK+      NKTTNEPINPNNNYEMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

7) virD2-1 in NC_017926


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  918 bits (3476),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 593/637 (94%), Positives = 620/637 (98%), Gaps = 1/637 (0%)

Query  1    MALEKSYSKNFEGDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60
            MALEKSYSK+FE+DELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  61   REPQKQVVIKNIGNMTRLHLKRAMDYIAKHGDLVRDEFFTEVNYNDIAEQWNEQFEKLLE  120
            REPQKQVVIKNIGNMTRLH KRAMDY AKHG+LVRDEFF EVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  121  NKSRVKNCALHLVFSIDENCNEKNLKVLELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  180
            ++SRVKNCALHLVFSIDENCNEKNLK LELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  181  VIINKTNRITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKDI  240
            VIINKTN+ITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+AIK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  241  ETELDTLEKQARNNKGFRHENYFYKVLGSATSQIESLKKRENAlsdhldslksllEKTHW  300
            ETELD+LEKQARNNK+FRHENYFYKVLGSATSQIESLKKRENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  301  EKEKFTPPINEKELNQQLKEIKWLNKESLTPKNTYKKTQKLVVCKNPLIKDYLYTTEKLF  360
            EKE+FTPP NEKELN+QLKEIKWLNKESLTPK+TYKKTQKLVVCK+PLIKD LYTT KLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  361  ATQKKIIDLEKNYKDLKVLKEEFSKDLEADLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420
            ATQKKIIDLEK+YKDLKVLKEEFSKDLE +LSHSKKRFELYTRLKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  421  EKIALDFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  480
            EKIALDFKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  481  KIDDSVKNSSPQGNLLDKQAWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540
            KIDDSVKNSSPQGNLLDKQ WLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASITLENLQSNHQITAV  600
            TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASI+LENLQ+NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  601  TQDMQENTNALknttkdf-nkttnEPINPNNNYEMDF  636
            TQD QENTNALK+      NKTTNEPINPNNNYEMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

8) HPG27_976 in NC_011333


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  917 bits (3472),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 571/611 (94%), Positives = 596/611 (98%), Gaps = 0/611 (0%)

Query  1    MALEKSYSKDFESDELFDYEIIKPKKTLRIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60
            MALEKSYSKDFESDELFDYEIIKPKKTL+IQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  61   REPQKQVVIKNIGNMTRLHSKRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE  120
            REPQKQVVIKNIGNMTRLHSKRAMDY AKHGELVRDEFFNEVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  121  NKSRVKNCALHLVFSIDENCNEKNLKVLELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  180
            ++SRVKNCALHLVFSIDENCNEKNLK LELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKDI  240
            VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  241  ETELDALETQARNNKSFRHENYFYKVLGSAASQIESLKKRENALSDHLDSLKNLLEKTHW  300
            ETELDALE QARNNKSFRHENYFYKVLGSA+SQIESLKKRENALSDHLD+LK+LLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  301  EKENFTPPTNEKELNRQLKKVKWFNKETPTSKNTYKKIQKLAVYKSPLIKDYLYTIKKLF  360
            EKENFTPPTNEKELNRQLK +KW+NKE+ T+K+TYKK QKL V KSPLIKD LYT KKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEADLSHSKKRFELYTRLKSMSKVFTSKNIVKNL  420
            ATQKKIIDLEKDYKDLKVLKEEFSKDLE +LSHSKKRFELYTRLKSMSKVF SK+IVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  421  EKIALDFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  480
            EKIALDFKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  481  KIDDNIRNSSPQDNLLDKQVWLNLLKHLKRLEEENYYFAKKRKEFLETRAMELSKDLKFL  540
            KIDD+++NSSPQ+NLLDKQVWLNLL HLKRLEEENY FAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  541  TQANENDLPIYERGQKDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600
            TQANENDLPIYERGQ+DKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  601  TQDTQENTNAL  611
            TQD QENTNAL
Sbjct  601  TQDKQENTNAL  611

9) HPSA_04645 in NC_017361


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  914 bits (3461),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 584/637 (92%), Positives = 617/637 (97%), Gaps = 1/637 (0%)

Query  1    MALEKSYSKDLESDELFDYEVIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLIQEESMRL  60
            MALEKSYSKD+ESDELFDYE+IKPKKTLKIQYTYAKRYYKEVEKFAKNLTQL QEE MRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  61   REPQKQVVIKNIGNMTRLHSKRAMDYIAKHGELVRDEFFSGVNYNDIAEQWNEQFEKLLE  120
            REPQKQVVIKNIGNMTRLHSKRAMDY AKHGELVRDEFF+ VNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  121  NKSRVKNCALHLVFSIDENCNEKNLKALELSAYQTLTNTLGYDYPFIMKLHTHQNNPHVH  180
            ++SRVKNCALHLVFSIDENCNEKNLKALELS YQTLTNTLGYDYPFIMKLH+HQNNPH H
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  181  VIINKTNKITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIHKAIKDI  240
            VIINKTNKITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNI +AIK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  241  ETELDTLETQARNNKSFRHENYFYKVLGSATSQIESLKKRENAlsdhldslksllEKTHW  300
            ETELD+LE QARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  301  EKEKFTPPTNEKEFNRQLKEIKWLNKESLTPKNTYKKIQKLAVCKSPLIKDYLYTTKKLF  360
            EKE+FTPPTNEKE+NRQLKEIKWLNKESLTPK+TYKK QKL VCKSPLIKD LYTTKKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEADLFHSKKRFELYTKLKSMSKVFTSKNIVKNL  420
            ATQKKIIDLEKDYKDLKVLKEEFSKDLE +L HSKKRFELYT+LKSMSKVF SK+IVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  421  EKIALDFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  480
            EKIALDFKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  481  KIDDNIRNSSPQDNLLDKQVWLNLLKHLKRLEEENYCFAKKRKEFLETRAIELSKDLKFL  540
            KIDD+++NSSPQ+NLLDKQVWLNLL HLKRLEEENYCFAKKRKEFLETRA+ELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  541  TQANENDLPIYERGQKDKIIKRCEKSLNFLKKELQCFKTLSKSASIALENLQNNHQTTAI  600
            TQANENDLPIYERGQ+DKIIKRCEKSLNFL+KELQCFKTLSKSASIALENLQNNHQ TA+
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  601  AQDTQENTNALKNAT-QDFNKTTNEPINPNNNYEMDF  636
            +QD QENTNALK+   +DFNKTTNEPINPNNNYEMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

10) virD2-1 in NC_017367


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  911 bits (3452),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 585/637 (92%), Positives = 616/637 (97%), Gaps = 1/637 (0%)

Query  1    MALEKSYSKNFESDELFDYEIIKPKKTIKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60
            MALEKSYSK+FESDELFDYEIIKPKKT+KIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  61   REPQKQVVIKNIGNMTCLHSKRAMDYIAKHGELVRDEFFSRVNYNDIAEQWNEQFEKLLE  120
            REPQKQVVIKNIGNMT LHSKRAMDY AKHGELVRDEFF+ VNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  121  NKSRVKNCALHLVFSINENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHVH  180
            ++SRVKNCALHLVFSI+ENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLH+HQNNPH H
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  181  VIINKTNKITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKGI  240
            VIINKTNKITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+AIK I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  241  ETELDTLEKQARNNKSFRHENYFYKVLGSATSQIEILKKREdalsdhldslksllEKTHW  300
            ETELD+LEKQARNNKSFRHENYFYKVLGSATSQIE LKKRE+ALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  301  EKEKFTHPTNEKEFNQQLKEIRWLNKESLTPKNTYKKIQKLAVCKSPLIKDYLYTIKKLF  360
            EKE+FT PTNEKE+N+QLKEI+WLNKESLTPK+TYKK QKL VCKSPLIKD LYT KKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVDLSHSKKRFELYTKLKSMSKVFTSKSIVKNL  420
            ATQKKIIDLEKDYKDLKVLKEEFSKDLEV+LSHSKKRFELYT+LKSMSKVF SKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  421  EKIALDFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  480
            EKIALDFKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  481  KIDDSVKNSNPQDNLLGKQVWLNLLEHLKRLEEENYCFAKKRKGFLETRAMELSKDLKFL  540
            KIDDSVKNS+PQ+NLL+KQVWLNLLEHLKRLEEENYCFAKKRK FLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  541  KQAHENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIALENLQSNHQITAV  600
             QA+ENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQ+NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  601  TQTAQENTNALKNTT-QDFNKTTNEPINPNNNHEMDF  636
            TQ  QENTNALK+   +DFNKTTNEPINPNNN EMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

11) HPPC_07770 in NC_014555


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  910 bits (3448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 586/637 (92%), Positives = 610/637 (96%), Gaps = 1/637 (0%)

Query  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYEEAEKFAKNLTQLTQEECMRL  60
            MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYY E EKFAKNLTQLTQEE MRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  61   REPQKQVVIKNIGNMTRLHSKRAMDYIAKHGELVRDEFFSRVNYNDIAEQWNEQFENLLE  120
            REPQKQVVIKNIGNMTRLHSKRAMDY AKHGELVRDEFF+ VNYNDIAEQWNEQFE +LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  121  NKSRVKNCALHLVFSIDENCNEKILKALELSVYQTLTDTLGYDYPFIIKLHAHQNNPHAH  180
            ++SRVKNCALHLVFSIDENCNEK LKALELSVYQTLT+TLGYDYPFI+KLHAHQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIHKAIKNI  240
            VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNI +AIKNI
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  241  EIELDTLETQARNNKSFRHENYFYKVLGSATFQIESLKKRENALSDHLDSLKNLLEKTHW  300
            E ELD+LE QARNNKSFRHENYFYKVLGSAT QIESLKKRENALSDHLD+LK+LLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  301  EKENFTPPTNEKELNRQLKEIKWLNKETPTSKNTYKKIQKLAVCKSPLIKDYLYTIKKLF  360
            EKENFTPPTNEKELNRQLKEIKWLNKE+ T+K+TYKK QKL VCKSPLIKD LYT KKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  361  ATQKKIIDLEKDYKDLRALKEEFSKDLEADLSHSKKRFELYTKLKSMSKVFISKSIVKNL  420
            ATQKKIIDLEKDYKDL+ LKEEFSKDLE +LSHSKKRFELYT+LKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  421  EKIALNFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLAAKFFKDSALLVNIARFEMK  480
            EKIAL+FKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFL AKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  481  KIDDSVKNSNPQGNLLDKQAWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540
            KIDDSVKNS+PQGNLLDKQ WLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIALENLQSNYQITAV  600
            TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQ+N QITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  601  TQDTQENTNALKNTT-QDFnkttneptnpnnnYEMDF  636
            TQD QENTNALK+   +DFNKTTNEP NPNNNYEMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

12) HPSH112_07005 in NC_017741


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  905 bits (3428),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 595/637 (94%), Positives = 620/637 (98%), Gaps = 2/637 (0%)

Query  1    MALEKSY-KDFESDELFDYEIIKPKKTLKVQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  59
            MALEKSY KDFESDELFDYEIIKPKKTLK+QYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  60   RDPQKQVVIKNIGNMTRLHSKRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE  119
            R+PQKQVVIKNIGNMTRLHSKRAMDY AKHGELVRDEFFNEVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  120  NKSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  179
            ++SRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  180  VIINKTNRITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKVIKDI  239
            VIINKTN+ITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+ IK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  240  ETELDTLEKQARNNKSFRYENYFYKVLGSATSQIESLKKRENAlsdhldslksllEKTHW  299
            ETELD+LEKQARNNKSFR ENYFYKVLGSATSQIESLKKRENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  300  EKEKFTPPINEKELNQQLKEIKWLNKESLTPKNTYKKTQKLVVCKSPLIKDYLYTTKKLF  359
            EKE+FTPP NEKELN+QLKEIKWLNKESLTPK+TYKKTQKLVVCKSPLIKD LYTTKKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  360  ATQKKIIALEKDYKDLKVLKEEFSKDLEADLSHSKKRFELYTRLKSMSKVFISKSIVKNL  419
            ATQKKII LEKDYKDLKVLKEEFSKDLE +LSHSKKRFELYTRLKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  420  EKIALNFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  479
            EKIAL+FKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  480  KIDDSVKNSNPQGNLLDKQAWLNLLEHLKRLEEKNYCFAKKRKEFLETRAMELSKDLKFL  539
            KIDDSVKNS+PQGNLLDKQ WLNLLEHLKRLEE NYCFAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  540  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIALENLQSNHQITAV  599
            TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQ+NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  600  TQDTQENTNALKNTT-QDFnkttneptnpnnnHEMDF  635
            TQD QENTNALK+   +DFNKTTNEP NPNNN EMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

13) HPSH169_01150 in NC_017740


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  905 bits (3428),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 595/637 (94%), Positives = 620/637 (98%), Gaps = 2/637 (0%)

Query  1    MALEKSY-KDFESDELFDYEIIKPKKTLKVQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  59
            MALEKSY KDFESDELFDYEIIKPKKTLK+QYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  60   RDPQKQVVIKNIGNMTRLHSKRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE  119
            R+PQKQVVIKNIGNMTRLHSKRAMDY AKHGELVRDEFFNEVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  120  NKSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  179
            ++SRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  180  VIINKTNRITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKVIKDI  239
            VIINKTN+ITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+ IK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  240  ETELDTLEKQARNNKSFRYENYFYKVLGSATSQIESLKKRENAlsdhldslksllEKTHW  299
            ETELD+LEKQARNNKSFR ENYFYKVLGSATSQIESLKKRENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  300  EKEKFTPPINEKELNQQLKEIKWLNKESLTPKNTYKKTQKLVVCKSPLIKDYLYTTKKLF  359
            EKE+FTPP NEKELN+QLKEIKWLNKESLTPK+TYKKTQKLVVCKSPLIKD LYTTKKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  360  ATQKKIIALEKDYKDLKVLKEEFSKDLEADLSHSKKRFELYTRLKSMSKVFISKSIVKNL  419
            ATQKKII LEKDYKDLKVLKEEFSKDLE +LSHSKKRFELYTRLKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  420  EKIALNFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  479
            EKIAL+FKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  480  KIDDSVKNSNPQGNLLDKQAWLNLLEHLKRLEEKNYCFAKKRKEFLETRAMELSKDLKFL  539
            KIDDSVKNS+PQGNLLDKQ WLNLLEHLKRLEE NYCFAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  540  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIALENLQSNHQITAV  599
            TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQ+NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  600  TQDTQENTNALKNTT-QDFnkttneptnpnnnHEMDF  635
            TQD QENTNALK+   +DFNKTTNEP NPNNN EMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

14) HPCU_01285 in NC_017358


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  904 bits (3426),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 595/637 (94%), Positives = 620/637 (98%), Gaps = 2/637 (0%)

Query  1    MALEKSY-KDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  59
            MALEKSY KDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  60   RDPQKQVVIKNIGNMTRLHSKRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE  119
            R+PQKQVVIKNIGNMTRLHSKRAMDY AKHGELVRDEFFNEVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  120  NKSRVKNCTLHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  179
            ++SRVKNC+LHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  180  VIINKTNRITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKVIKDI  239
            VIINKTN+ITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+ IK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  240  ETELDTLEKQARNNKSFRYENYFYKVLGSATSQIESLKKRENAlsdhldslksllEKTHW  299
            ETELD+LEKQARNNKSFR ENYFYKVLGSATSQIESLKKRENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  300  EKEKFTPPINEKELNQQLKEIKWLNKESLTPKNTYKKTQKLVVCKSPLIKDYLYTTKKLF  359
            EKE+FTPP NEKELN+QLKEIKWLNKESLTPK+TYKKTQKLVVCKSPLIKD LYTTKKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  360  ATQKKIIALEKDYKDLKVLKEEFSKDLEADLSHSKKRFELYTRLKSMSKVFISKSIVKNL  419
            ATQKKII LEKDYKDLKVLKEEFSKDLE +LSHSKKRFELYTRLKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  420  EKIALNFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  479
            EKIAL+FKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  480  KIDDSVKNSNPQGNLLDKQAWLNLLEHLKRLEEKNYCFAKKRKEFLETRAMELSKDLKFL  539
            KIDDSVKNS+PQGNLLDKQ WLNLLEHLKRLEE NYCFAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  540  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIALENLQSNHQITAV  599
            TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQ+NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  600  TQDTQENTNALKNTT-QDFnkttneptnpnnnHEMDF  635
            TQD QENTNALK+   +DFNKTTNEP NPNNN EMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

15) HPSH_04530 in NC_010698


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  904 bits (3425),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 593/637 (94%), Positives = 620/637 (98%), Gaps = 2/637 (0%)

Query  1    MALEKSY-KDFESDELFDYEIIKPKKTLKVQYTYAKRYYKEVEKFAKNLTQLAQEEFMRL  59
            MALEKSY KDFESDELFDYEIIKPKKTLK+QYTYAKRYYKEVEKFAKNLTQL+QEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  60   RDPQKQVVIKNIGNMTRLHSKRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE  119
            R+PQKQVVIKNIGNMTRLHSKRAMDY AKHGELVRDEFFNEVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  120  NKSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  179
            ++SRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  180  VIINKTNRITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKVIKDI  239
            VIINKTN+ITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+ IK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  240  ETELDTLEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENAlsdhldslksllEKTHW  299
            ETELD+LEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  300  EKEKFTPLINEKELNQQLKEIKWLNKESLTPKNTYKKTQKLVVCKSPLIKDYLYTTKKLF  359
            EKE+FTP  NEKELN+QLKEIKWLNKESLTPK+TYKKTQKLVVCKSPLIKD LYTTKKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  360  ATQKKIIALEKDYKDLKVLKEEFSKDLEADLSHSKKRFELYTRLKSMSKVFISKSIVKNL  419
            ATQKKII LEKDYKDLKVLKEEFSKDLE +LSHSKKRFELYTRLKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  420  EKIALNFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  479
            EKIAL+FKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  480  KIDDSVKNSNAQGNLLDKQAWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  539
            KIDDSVKNS++QGNLLDKQ WLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  540  TQVNENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIALENLQSNHQITAV  599
            TQ NENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQ+NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  600  TQDTQENTNALKNTT-QDFnkttneptnpnnnHEMDF  635
            TQD QENTNALK+   +DFNKTTNEP NPNNN EMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637

16) HPSH417_05615 in NC_017739


> NC_011498_P1|15|G15|210134648|YP_002301087.1|Helicobacter_pylori_P12|-|20620..22533|virD2-1|HPP12_0451|relaxase
Length=637

 Score =  903 bits (3420),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 593/637 (94%), Positives = 620/637 (98%), Gaps = 2/637 (0%)

Query  1    MALEKSY-KDFESDELFDYEIIKPKKTLKVQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  59
            MALEKSY KDFESDELFDYEIIKPKKTLK+QYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
Sbjct  1    MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL  60

Query  60   RDPQKQVVIKNIGNMTRLHSKKAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE  119
            R+PQKQVVIKNIGNMTRLHSK+AMDY AKHGELVRDEFFNEVNYNDIAEQWNEQFE++LE
Sbjct  61   REPQKQVVIKNIGNMTRLHSKRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILE  120

Query  120  NKSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH  179
            ++SRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLH+HQNNPHAH
Sbjct  121  KNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHAHQNNPHAH  180

Query  180  VIINKTNRITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKVIKDI  239
            VIINKTN+ITNKQLRF+SKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIY+ IK+I
Sbjct  181  VIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI  240

Query  240  ETELDTLEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENAlsdhldslksllEKTHW  299
            ETELD+LEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLD+LKSLLEKTHW
Sbjct  241  ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHW  300

Query  300  EKEKFTPLINEKELNQQLKEIKWLNKESLTPKNTYKKTQKLVVCKSPLIKDYLYTTKKLF  359
            EKE+FTP  NEKELN+QLKEIKWLNKESLTPK+TYKKTQKLVVCKSPLIKD LYTTKKLF
Sbjct  301  EKENFTPPTNEKELNRQLKEIKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLF  360

Query  360  ATQKKIIALEKDYKDLKVLKEEFSKDLEADLSHSKKRFELYTRLKSMSKVFISKSIVKNL  419
            ATQKKII LEKDYKDLKVLKEEFSKDLE +LSHSKKRFELYTRLKSMSKVFISKSIVKNL
Sbjct  361  ATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFELYTRLKSMSKVFISKSIVKNL  420

Query  420  EKIALNFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK  479
            EKIAL+FKSDRHSI+QRAFEFFRYMNYQNLSLT+K+NMFLVAKFFKDSALLVNIARFEMK
Sbjct  421  EKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK  480

Query  480  KIDDSVKNSNAQGNLLDKQAWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  539
            KIDDSVKNS++QGNLLDKQ WLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL
Sbjct  481  KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFL  540

Query  540  TQVNENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIALENLQSNHQITAV  599
            TQ NENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTL KSASIALENLQ+NHQITAV
Sbjct  541  TQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAV  600

Query  600  TQDTQENTNALKNTT-QDFnkttneptnpnnnHEMDF  635
            TQD QENTNALK+   +DFNKTTNEP NPNNN EMDF
Sbjct  601  TQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF  637