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Homologs of SE0037 gene of NC_004461_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ccrA
( YP_039531.1 )

site-specific recombinase

NC_002952
(Staphylococcus aureus MRSA252)

0.0

2) SERP2498
( YP_190040.1 )

cassette chromosome recombinase A

NC_002976
(Staphylococcus epidermidis RP62A)

0.0

3) SE0037
( NP_763592.1 )

cassette chromosome recombinase A

NC_004461
(Staphylococcus epidermidis ATCC 12228)

0.0

100

4) ccrA
( YP_006236414.1 )

site-specific recombinase

NC_017763
(Staphylococcus aureus HO 5096 0412)

0.0

5) BN843_710
( YP_007867150.1 )

Cassette chromosome recombinase A

NC_021059
(Staphylococcus aureus M1)

0.0

6) ccrA
( YP_005746509.1 )

site-specific recombinase

NC_017342
(Staphylococcus aureus TCH60)

0.0

7) MS7_0070
( YP_005756537.1 )

resolvase, N terminal domain protein

NC_017351
(Staphylococcus aureus 11819-97)

0.0

8) ccrA
( YP_492758.1 )

cassette chromosome recombinase A

NC_007793
(Staphylococcus aureus FPR3757)

0.0

9) ccrA
( YP_005738213.1 )

cassette chromosome recombinase A1

NC_017338
(Staphylococcus aureus JKD6159)

0.0

10) SAMSHR1132_00410
( YP_005324564.1 )

site-specific recombinase

NC_016941
(Staphylococcus aureus MSHR1132)

0.0

11) ccrA
( YP_001573964.1 )

cassette chromosome recombinase A

NC_010079
(Staphylococcus aureus TCH1516)

0.0

12) ccrA
( YP_005740812.1 )

Cassette chromosome recombinase A

NC_017340
(Staphylococcus aureus 04-02981)

0.0

13) CA347_59
( YP_008126943.1 )

recombinase family protein

NC_021554
(Staphylococcus aureus CA-347)

0.0

14) SaurJH1_0050
( YP_001315203.1 )

resolvase domain-containing protein

NC_009632
(Staphylococcus aureus JH1)

0.0

15) SaurJH9_0049
( YP_001245437.1 )

resolvase

NC_009487
(Staphylococcus aureus JH9)

0.0

16) ccrA
( YP_001440651.1 )

cassette chromosome recombinase A

NC_009782
(Staphylococcus aureus Mu3)

0.0

17) ccrA
( NP_370586.1 )

cassette chromosome recombinase A

NC_002758
(Staphylococcus aureus Mu50)

0.0

18) ccrA
( NP_373298.1 )

cassette chromosome recombinase A

NC_002745
(Staphylococcus aureus N315)

0.0

19) ccrA
( YP_008586688.1 )

cassette chromosome recombinase A

NC_022443
(Staphylococcus aureus SA40)

0.0

20) ccrA
( NP_644854.1 )

cassette chromosome recombinase A

NC_003923
(Staphylococcus aureus MW2)

0.0

21) SAKOR_00048
( YP_008490232.1 )

Site-specific recombinase

NC_022226
(Staphylococcus aureus CN1)

0.0

22) ccrA1
( YP_005754052.1 )

site-specific recombinase CcrA1

NC_017349
(Staphylococcus aureus LGA251)

5e-175

23) ccrA1
( YP_184952.1 )

cassette chromosome recombinase A1

NC_002951
(Staphylococcus aureus COL)

7e-173

24) ccrA1
( YP_007582643.1 )

Cassette chromosome recombinase A1

NC_020536
(Staphylococcus aureus ST228)

7e-173

25) ccrA1
( YP_007620358.1 )

Cassette chromosome recombinase A1

NC_020566
(Staphylococcus aureus ST228)

7e-173

26) ccrA1
( YP_007622344.1 )

Cassette chromosome recombinase A1

NC_020568
(Staphylococcus aureus ST228)

7e-173

27) ccrA1
( YP_007576656.1 )

Cassette chromosome recombinase A1

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

7e-173

28) ccrA1
( YP_007618371.1 )

Cassette chromosome recombinase A1

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

7e-173

29) ccrA1
( YP_007578664.1 )

Cassette chromosome recombinase A1

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

7e-173

30) ccrA1
( YP_007580628.1 )

Cassette chromosome recombinase A1

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

7e-173

31) ccrA1
( YP_007584607.1 )

Cassette chromosome recombinase A1

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

7e-173

32) SSP0036
( YP_300126.1 )

cassette chromosome recombinase A

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

9e-173

33) ccrA1
( YP_042166.1 )

site-specific recombinase

NC_002953
(Staphylococcus aureus MSSA476)

1e-171

34) ccrA
( YP_008167248.1 )

cassette chromosome recombinase A

NC_021670
(Staphylococcus aureus Bmb9393)

6e-164

35) ccrA
( YP_005743457.1 )

cassette chromosome recombinase A1

NC_017341
(Staphylococcus aureus JKD6008)

6e-164

36) SAT0131_00056
( YP_005751354.1 )

Cassette chromosome recombinase A3

NC_017347
(Staphylococcus aureus T0131)

6e-164

37) ccrA
( YP_005730116.1 )

site-specific recombinase CcrA

NC_017331
(Staphylococcus aureus TW20)

6e-164

38) BN843_350
( YP_007867114.1 )

Cassette chromosome recombinase A

NC_021059
(Staphylococcus aureus M1)

9e-111

39) SE0057
( NP_763612.1 )

cassette chromosome recombinase A

NC_004461
(Staphylococcus epidermidis ATCC 12228)

9e-111

• Sequence Alignments

1) ccrA in NC_002952


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  689 bits (2606),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 429/449 (96%), Positives = 441/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAITEKHHIQHINFYSDKQSGRKDNRSGYRQITQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAI+EKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYRVHILSVHDGYFDMDQAFDRFKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTY+VHILSVHDGYFDMDQAFDR+KLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLR QKQTKQT+SDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQKQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIK+AIDKRIKRQRNIEKHH LTQ QLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHqiqntiqniiqKRFTLNMLYPYIDEIL  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQ+TIQNIIQKRFTLN+LYPYI+ I 
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKSKTLMGIYFKNEPLNIVNQTTQSSIA  449
            ITK K L+GIYFKNEPLNIVNQ+ QSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

2) SERP2498 in NC_002976


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  689 bits (2606),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 429/449 (96%), Positives = 441/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAITEKHHIQHINFYSDKQSGRKDNRSGYRQITQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAI+EKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYRVHILSVHDGYFDMDQAFDRFKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTY+VHILSVHDGYFDMDQAFDR+KLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLR QKQTKQT+SDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQKQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIK+AIDKRIKRQRNIEKHH LTQ QLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHqiqntiqniiqKRFTLNMLYPYIDEIL  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQ+TIQNIIQKRFTLN+LYPYI+ I 
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKSKTLMGIYFKNEPLNIVNQTTQSSIA  449
            ITK K L+GIYFKNEPLNIVNQ+ QSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

3) SE0037 in NC_004461


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 449/449 (100%), Positives = 449/449 (100%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQAMQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

4) ccrA in NC_017763


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  678 bits (2565),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 443/449 (99%), Positives = 447/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQITQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHHGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYH+GTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIK+AIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhiiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQH IQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

5) BN843_710 in NC_021059


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  677 bits (2559),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 446/449 (99%), Positives = 448/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQMTQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYRVHILSVHDGYFDMDQAFDRLKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTY+VHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRLQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLR QKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQAMQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

6) ccrA in NC_017342


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  677 bits (2558),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 445/449 (99%), Positives = 448/449 (99%), Gaps = 0/449 (0%)

Query  7    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQMTQL  66
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  67   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYRVHILSVHDGYFDMDQAFDRLKLNIF  126
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTY+VHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  127  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  186
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  187  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  246
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  247  YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  306
            YEQAQRLR QKQTKQT+SDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  307  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  366
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  367  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  426
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  427  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  455
            ITKDKNLIGIYFKNEPLNIVNQAMQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

7) MS7_0070 in NC_017351


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  676 bits (2556),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 441/449 (99%), Positives = 446/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQITQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLR QKQTKQT+SDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIK+AIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhiiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQH IQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

8) ccrA in NC_017338


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  676 bits (2556),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 441/449 (99%), Positives = 446/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQITQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLR QKQTKQT+SDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIK+AIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhiiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQH IQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

9) SAMSHR1132_00410 in NC_016941


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  676 bits (2556),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 441/449 (99%), Positives = 446/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQITQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLR QKQTKQT+SDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIK+AIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhiiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQH IQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

10) ccrA in NC_007793


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  676 bits (2556),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 441/449 (99%), Positives = 446/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQITQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLR QKQTKQT+SDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIK+AIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhiiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQH IQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

11) ccrA in NC_010079


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  676 bits (2556),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 441/449 (99%), Positives = 446/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQITQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLR QKQTKQT+SDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIK+AIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhiiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQH IQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

12) ccrA in NC_017340


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  674 bits (2547),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 439/449 (98%), Positives = 447/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQMTQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDR+KLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNG+FIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLRSQKQ KQTSSDNQLKQKIKCPCCN+TLTNMT+RKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVC+DFYQNQRIYTKIKGAIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

13) CA347_59 in NC_021554


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  674 bits (2547),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 439/449 (98%), Positives = 447/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQMTQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDR+KLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNG+FIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLRSQKQ KQTSSDNQLKQKIKCPCCN+TLTNMT+RKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVC+DFYQNQRIYTKIKGAIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

14) SaurJH1_0050 in NC_009632


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  674 bits (2547),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 439/449 (98%), Positives = 447/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQMTQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDR+KLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNG+FIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLRSQKQ KQTSSDNQLKQKIKCPCCN+TLTNMT+RKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVC+DFYQNQRIYTKIKGAIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

15) SaurJH9_0049 in NC_009487


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  674 bits (2547),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 439/449 (98%), Positives = 447/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQMTQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDR+KLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNG+FIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLRSQKQ KQTSSDNQLKQKIKCPCCN+TLTNMT+RKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVC+DFYQNQRIYTKIKGAIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

16) ccrA in NC_009782


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  674 bits (2547),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 439/449 (98%), Positives = 447/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQMTQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDR+KLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNG+FIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLRSQKQ KQTSSDNQLKQKIKCPCCN+TLTNMT+RKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVC+DFYQNQRIYTKIKGAIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

17) ccrA in NC_002758


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  674 bits (2547),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 439/449 (98%), Positives = 447/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQMTQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDR+KLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNG+FIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLRSQKQ KQTSSDNQLKQKIKCPCCN+TLTNMT+RKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVC+DFYQNQRIYTKIKGAIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

18) ccrA in NC_002745


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  674 bits (2547),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 439/449 (98%), Positives = 447/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQMTQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDR+KLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNG+FIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLRSQKQ KQTSSDNQLKQKIKCPCCN+TLTNMT+RKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVC+DFYQNQRIYTKIKGAIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

19) ccrA in NC_022443


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  672 bits (2540),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 441/449 (99%), Positives = 446/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDR+KLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRLQKQTKQTSSDNQLKQKIKCPCCNATLTNMTVRKKNHILRYYVCPKNMNASR  300
            YEQAQRLR QKQTKQTSSDNQLKQKIKCPCCNATLTNMT+RKKNH LRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLI  360
            FVCDFKGINAQTLEDKVLEVC+DFYQNQRIYTKIKGAIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLHQQPQRTTSinghqiqhtiqniiqKRFTLNILYPYIETIH  420
            EKLAQGIIDAETFREQTQSL+QQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKDKNLIGIYFKNEPLNIVNQTMQSSIA  449
            ITKDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

20) ccrA in NC_003923


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  672 bits (2542),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 432/449 (97%), Positives = 441/449 (99%), Gaps = 0/449 (0%)

Query  1    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQITQL  60
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGTFIINQNESPTVKAVFNY  180
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY+YHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300
            YEQAQRLR QKQTKQT+SDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQKQLI  360
            FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIK+AIDKRIKRQRNIEKHH LTQ QLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHqiqntiqniiqKRFTLNMLYPYIDEIL  420
            EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQ+TIQNIIQKRFTLN+LYPYI+ I 
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKSKTLMGIYFKNEPLNIVNQTTQSSIA  449
            ITK K L+GIYFKNEPLNIVNQ+ QSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

21) SAKOR_00048 in NC_022226


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  667 bits (2523),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 431/449 (96%), Positives = 440/449 (98%), Gaps = 0/449 (0%)

Query  7    MKQVIGYLRQSTMKQQSLaaqkqaieaiaekHHIQHINFYSDKQSGRKDNRSGYRQLTQL  66
            MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQ+TQL
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  67   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  126
            IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  127  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  186
            ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  187  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  246
            YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  247  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTVRKKNHILRYYVCPKNMNASR  306
            YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMT+RKKNH LRYYVCPKNMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  307  FVCDFKGINAQTLEDKVLKVCQDFYQDQHIYVKIKNAIDKRIKRQRNIEKHHTLTQEQLI  366
            FVCDFKGINAQTLEDKVL VC+DFYQ+Q+IY KIK AIDKRIKRQRNIEKHH LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  367  EKLAQGIIDAETFRKQMQSLHQQPQRITSISEhqiqhtiqniiqKRFTLNILYPYIETIH  426
            EKLAQGIIDAETFR Q QSL+QQPQR TSI+ HQIQHTIQNIIQKRFTLNILYPYIETIH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  427  IAKDKNLIGIYFKNEPLNIVNQTMQSSIA  455
            I+KDKNLIGIYFKNEPLNIVNQ+MQSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

22) ccrA1 in NC_017349


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  607 bits (2293),  Expect = 5e-175, Method: Compositional matrix adjust.
 Identities = 349/449 (78%), Positives = 414/449 (93%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTLKQQSLSAQKQTIKTLAEKHNIQHIIFYSDKQSGRTENRTGYQQITEL  60
            MKQ IGYLRQST+KQQSL+AQKQ+I ++AEKH+IQHI FYSDKQSGR +NR+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQTYHVHILSVHDGYFDMNKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQTYHVHILSVHDGYFDM++AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGLREKAKQGKLITTHAPFGYHYHNGTFMINNIEAPTVKAVFSY  180
            ISLAELESDNIGEQV+NGL+EKAKQG+LITTHAPFGY+YHNGTF+IN+ E+PTVKAVF+Y
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEDDEKFINRKPYQVRNIIMNPNYCGRVINQYGRYDNMCPSIVSTSI  240
            Y++G GYKKIAQ LE+D+ +INR+PYQVRNII+NPNYCGRV NQYG++DNM PSIVSTSI
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEQAQAIRSQKQLKRTSSANQLKQKIKCPYCGSTLTNITIRKKHRTLRYYVCPQNMNASR  300
            YEQAQ +RSQKQ K+TSS NQLKQKIKCP C +TLTN+TIRKK++TLRYYVCP+NMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQSLEASVLVTCQDFFQNQHLYSKINHTIQKRLKKQKDIEAKSTVTQEQLI  360
            FVC+FKGINAQ+LE  VL  C+DF+QNQ++Y+KI+ +I+KR+K+Q++IE    +TQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGKIDAETFREQTQSFRQQSKPITSIHTHQIQKALQNVIQQSFTLNMLYPYIDEIH  420
            EKLAQG IDAETFREQTQS+RQQ++  TSI+ HQIQ ++QN+IQ+ FTLN+LYPYI+ IH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ITKSKTLTGIYFKNEPLNIVNQTAQSSIA  449
            ITK K L GIYFKNEPLNIVNQ+ QSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

23) ccrA1 in NC_002951


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  600 bits (2266),  Expect = 7e-173, Method: Compositional matrix adjust.
 Identities = 337/449 (76%), Positives = 406/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ IGYLRQST KQQSLAAQKQ+IEA+A KH+IQ I FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYHNGTFTIDTVKAPTVKAVFNY  180
            ISLAELESDNIGEQV+NG++EKAKQG++ITTHAPFGY+YHNGTF I+   +PTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE D+ +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASR  300
            YE+AQ  R+QK  K+ +S+NQLKQKIKCP C++TLTNMTIRKK+HTLRYYVCP+NMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+KRQR+IE    L +EQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQDKIDAETFREQTQSLRQQSKPISSISTYQIRKAFQNIIQQRFTLNMLYPYIDEIN  420
            EKLAQ+ IDAETFREQTQSLRQQ++  +SI+  QI+ ++QNIIQ+RFTLN+LYPYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ISKNKSLAGIYFKNEPLNIVKQTMELSIV  449
            I+K+K+L GIYFKNEPLNIV+Q+M+ SI 
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

24) ccrA1 in NC_020529


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  600 bits (2266),  Expect = 7e-173, Method: Compositional matrix adjust.
 Identities = 337/449 (76%), Positives = 406/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ IGYLRQST KQQSLAAQKQ+IEA+A KH+IQ I FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYHNGTFTIDTVKAPTVKAVFNY  180
            ISLAELESDNIGEQV+NG++EKAKQG++ITTHAPFGY+YHNGTF I+   +PTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE D+ +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASR  300
            YE+AQ  R+QK  K+ +S+NQLKQKIKCP C++TLTNMTIRKK+HTLRYYVCP+NMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+KRQR+IE    L +EQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQDKIDAETFREQTQSLRQQSKPISSISTYQIRKAFQNIIQQRFTLNMLYPYIDEIN  420
            EKLAQ+ IDAETFREQTQSLRQQ++  +SI+  QI+ ++QNIIQ+RFTLN+LYPYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ISKNKSLAGIYFKNEPLNIVKQTMELSIV  449
            I+K+K+L GIYFKNEPLNIV+Q+M+ SI 
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

25) ccrA1 in NC_020564


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  600 bits (2266),  Expect = 7e-173, Method: Compositional matrix adjust.
 Identities = 337/449 (76%), Positives = 406/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ IGYLRQST KQQSLAAQKQ+IEA+A KH+IQ I FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYHNGTFTIDTVKAPTVKAVFNY  180
            ISLAELESDNIGEQV+NG++EKAKQG++ITTHAPFGY+YHNGTF I+   +PTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE D+ +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASR  300
            YE+AQ  R+QK  K+ +S+NQLKQKIKCP C++TLTNMTIRKK+HTLRYYVCP+NMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+KRQR+IE    L +EQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQDKIDAETFREQTQSLRQQSKPISSISTYQIRKAFQNIIQQRFTLNMLYPYIDEIN  420
            EKLAQ+ IDAETFREQTQSLRQQ++  +SI+  QI+ ++QNIIQ+RFTLN+LYPYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ISKNKSLAGIYFKNEPLNIVKQTMELSIV  449
            I+K+K+L GIYFKNEPLNIV+Q+M+ SI 
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

26) ccrA1 in NC_020532


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  600 bits (2266),  Expect = 7e-173, Method: Compositional matrix adjust.
 Identities = 337/449 (76%), Positives = 406/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ IGYLRQST KQQSLAAQKQ+IEA+A KH+IQ I FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYHNGTFTIDTVKAPTVKAVFNY  180
            ISLAELESDNIGEQV+NG++EKAKQG++ITTHAPFGY+YHNGTF I+   +PTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE D+ +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASR  300
            YE+AQ  R+QK  K+ +S+NQLKQKIKCP C++TLTNMTIRKK+HTLRYYVCP+NMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+KRQR+IE    L +EQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQDKIDAETFREQTQSLRQQSKPISSISTYQIRKAFQNIIQQRFTLNMLYPYIDEIN  420
            EKLAQ+ IDAETFREQTQSLRQQ++  +SI+  QI+ ++QNIIQ+RFTLN+LYPYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ISKNKSLAGIYFKNEPLNIVKQTMELSIV  449
            I+K+K+L GIYFKNEPLNIV+Q+M+ SI 
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

27) ccrA1 in NC_020533


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  600 bits (2266),  Expect = 7e-173, Method: Compositional matrix adjust.
 Identities = 337/449 (76%), Positives = 406/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ IGYLRQST KQQSLAAQKQ+IEA+A KH+IQ I FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYHNGTFTIDTVKAPTVKAVFNY  180
            ISLAELESDNIGEQV+NG++EKAKQG++ITTHAPFGY+YHNGTF I+   +PTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE D+ +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASR  300
            YE+AQ  R+QK  K+ +S+NQLKQKIKCP C++TLTNMTIRKK+HTLRYYVCP+NMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+KRQR+IE    L +EQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQDKIDAETFREQTQSLRQQSKPISSISTYQIRKAFQNIIQQRFTLNMLYPYIDEIN  420
            EKLAQ+ IDAETFREQTQSLRQQ++  +SI+  QI+ ++QNIIQ+RFTLN+LYPYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ISKNKSLAGIYFKNEPLNIVKQTMELSIV  449
            I+K+K+L GIYFKNEPLNIV+Q+M+ SI 
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

28) ccrA1 in NC_020537


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  600 bits (2266),  Expect = 7e-173, Method: Compositional matrix adjust.
 Identities = 337/449 (76%), Positives = 406/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ IGYLRQST KQQSLAAQKQ+IEA+A KH+IQ I FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYHNGTFTIDTVKAPTVKAVFNY  180
            ISLAELESDNIGEQV+NG++EKAKQG++ITTHAPFGY+YHNGTF I+   +PTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE D+ +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASR  300
            YE+AQ  R+QK  K+ +S+NQLKQKIKCP C++TLTNMTIRKK+HTLRYYVCP+NMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+KRQR+IE    L +EQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQDKIDAETFREQTQSLRQQSKPISSISTYQIRKAFQNIIQQRFTLNMLYPYIDEIN  420
            EKLAQ+ IDAETFREQTQSLRQQ++  +SI+  QI+ ++QNIIQ+RFTLN+LYPYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ISKNKSLAGIYFKNEPLNIVKQTMELSIV  449
            I+K+K+L GIYFKNEPLNIV+Q+M+ SI 
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

29) ccrA1 in NC_020566


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  600 bits (2266),  Expect = 7e-173, Method: Compositional matrix adjust.
 Identities = 337/449 (76%), Positives = 406/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ IGYLRQST KQQSLAAQKQ+IEA+A KH+IQ I FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYHNGTFTIDTVKAPTVKAVFNY  180
            ISLAELESDNIGEQV+NG++EKAKQG++ITTHAPFGY+YHNGTF I+   +PTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE D+ +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASR  300
            YE+AQ  R+QK  K+ +S+NQLKQKIKCP C++TLTNMTIRKK+HTLRYYVCP+NMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+KRQR+IE    L +EQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQDKIDAETFREQTQSLRQQSKPISSISTYQIRKAFQNIIQQRFTLNMLYPYIDEIN  420
            EKLAQ+ IDAETFREQTQSLRQQ++  +SI+  QI+ ++QNIIQ+RFTLN+LYPYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ISKNKSLAGIYFKNEPLNIVKQTMELSIV  449
            I+K+K+L GIYFKNEPLNIV+Q+M+ SI 
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

30) ccrA1 in NC_020536


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  600 bits (2266),  Expect = 7e-173, Method: Compositional matrix adjust.
 Identities = 337/449 (76%), Positives = 406/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ IGYLRQST KQQSLAAQKQ+IEA+A KH+IQ I FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYHNGTFTIDTVKAPTVKAVFNY  180
            ISLAELESDNIGEQV+NG++EKAKQG++ITTHAPFGY+YHNGTF I+   +PTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE D+ +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASR  300
            YE+AQ  R+QK  K+ +S+NQLKQKIKCP C++TLTNMTIRKK+HTLRYYVCP+NMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+KRQR+IE    L +EQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQDKIDAETFREQTQSLRQQSKPISSISTYQIRKAFQNIIQQRFTLNMLYPYIDEIN  420
            EKLAQ+ IDAETFREQTQSLRQQ++  +SI+  QI+ ++QNIIQ+RFTLN+LYPYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ISKNKSLAGIYFKNEPLNIVKQTMELSIV  449
            I+K+K+L GIYFKNEPLNIV+Q+M+ SI 
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

31) ccrA1 in NC_020568


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  600 bits (2266),  Expect = 7e-173, Method: Compositional matrix adjust.
 Identities = 337/449 (76%), Positives = 406/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ IGYLRQST KQQSLAAQKQ+IEA+A KH+IQ I FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYHNGTFTIDTVKAPTVKAVFNY  180
            ISLAELESDNIGEQV+NG++EKAKQG++ITTHAPFGY+YHNGTF I+   +PTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE D+ +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASR  300
            YE+AQ  R+QK  K+ +S+NQLKQKIKCP C++TLTNMTIRKK+HTLRYYVCP+NMNASR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+KRQR+IE    L +EQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQDKIDAETFREQTQSLRQQSKPISSISTYQIRKAFQNIIQQRFTLNMLYPYIDEIN  420
            EKLAQ+ IDAETFREQTQSLRQQ++  +SI+  QI+ ++QNIIQ+RFTLN+LYPYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ISKNKSLAGIYFKNEPLNIVKQTMELSIV  449
            I+K+K+L GIYFKNEPLNIV+Q+M+ SI 
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

32) SSP0036 in NC_007350


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  600 bits (2265),  Expect = 9e-173, Method: Compositional matrix adjust.
 Identities = 337/449 (76%), Positives = 405/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAMGYLRQSTTKQQSLAAQKQTIKVLAEKHNIQHITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ +GYLRQST KQQSLAAQKQ+I  +AEKH+IQHI FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQTYHVHILSVRDGYFDMNKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQTYHVHILSV+DGYFDM++AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGLREKAKQGKLITTHAPFGYHYHNGTFTIDTVKSPTVKAVFNY  180
            ISLAELESDNIGEQV+NGL+EKAKQG+LITTHAPFGY+YHNGTF I+   SPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADNKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE DN +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKQVKRKPSENQLKQKIKCPYCHSTLTNMTVRKPDHSLRYYVCPQNMNNAR  300
            YE+AQ  R+QKQ K+ +S+NQLKQKIKCP C++TLTNMT+RK +H+LRYYVCP+NMN +R
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKKQKDIEAKNTLTQEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+K+Q++IE  + LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGKIDAESFRKQTQSSRQHSKPILSINAYQIQKAFQNIIQQRFTLNMLYPYIDEIH  420
            EKLAQG IDAE+FR QTQS RQ+++   SIN+ QIQ ++QNIIQ+RFTLN+LYPYI+ IH
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  INKNKTLTGIYFKNEPLNIVNQTTQSTIA  449
            I K+K L GIYFKNEPLNIVNQ+ QS+IA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

33) ccrA1 in NC_002953


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  595 bits (2249),  Expect = 1e-171, Method: Compositional matrix adjust.
 Identities = 334/449 (75%), Positives = 407/449 (91%), Gaps = 0/449 (0%)

Query  1    MKQAIGYLRQSTTKQQSLAAQKQTIKALAEKHNIQHITFYSDKQSGRTDKRNGYQQITEL  60
            MKQ IGYLRQST KQQSLAAQKQ+I A+AEKH+IQHI FYSDKQSGR D+R+GY+Q+T+L
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQGQCDVLCCYRLNRLHRNLKNALKLMKLCQTYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQGQCD+LCCYRLNRLHRNLKNALKL+KLCQTYHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  ISLAELESDNIGEQVKNGIKEKARQGKLITTHAPFGYHYHNGTFTIDTVKSPTVKAVFNY  180
            ISLAELESDNIGEQV+NG++EKA+QG+LITTHAPFGY+YHNGTF I+   SPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEADDNFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI  240
            Y++G GYKKIAQ LE D+ +INR+PYQVRNII+NPNYCGRV NQYGQ++NMFP+IVST+I
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEEAQVTRTQKQVKCKPSENQLKQKIKCPYCHSTLTNMTVRKPDHSLRYYVCPQNMNNAR  300
            YE+AQ  R+QKQ K  +S+NQLKQKIKCP C++TLTNMT+RK +H+LRYYVCP+NMN +R
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  FVCEFKGINAQELETSVLATCQDFFQNQQLYSKINHTIQQRLKRQRDIEIKTTLNHEQLI  360
            FVC+FKGINAQ LE  VL  C+DF+QNQ++Y+KI+ +I++R+KRQR+IE    L +EQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQGKIDAETFKEQTHSLHQQSKPISSISAYQIRKAFQNIIQQRFTLNMLYPYIDEIN  420
            EKLAQG IDAETF+EQT+SL+QQ++  +SI++ QI+ ++QNIIQ+RFTLN+LYPYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  421  ISKNKSLAGIYFKNEPLNIVKQTMKLSIV  449
            I+K+K+L GIYFKNEPLNIV+Q+M+ SI 
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

34) ccrA in NC_021670


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  570 bits (2152),  Expect = 6e-164, Method: Compositional matrix adjust.
 Identities = 327/449 (73%), Positives = 402/449 (90%), Gaps = 1/449 (0%)

Query  1    MKRAIGYLRQSTTKQQSLPAQKQAIELLAPKHNIQNIQYISDKQSGRTDNRTGYQQVTER  60
            MK+ IGYLRQST KQQSL+AQKQAIE +A KH+IQ+I++ SDKQSGR DNR+GY+QVT+ 
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQRQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQ QCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  MSLAELESDNIGEQVKNGLREKAKQGKLITTHAPFGYHYQNGTFIINNDESPTVKAVFNY  180
            +SLAELESDNIGEQV+NGL+EKAKQG+LITTHAPFGY+Y+NGTFIIN++ESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEDDNKLITRKPYQVRNIIMNPNYCGRVINQYGQYNNMVPPIVSATK  240
            Y++G GYKKIAQ LE+DN  I R+PYQVRNII+NPNYCGRV NQYGQ++NM P+IVS++ 
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEHAQAIRNKKQLHCIPSENQLKQKIKCPCCDSTLTNMTIRKK-HTLRYYICPKNMNESR  299
            YE+AQ +R++KQ    +S+NQLKQKIKCPCC++TLTNMTIRKK HTLRYY+CPKNMN SR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  300  FVCSFKGINAQKLEVQVLATCQNFFQNQQLYSKINNAIHQRLKKQRVIEAKSTLTQEQLI  359
            FVC FKGINAQ LE +VL  C++F+QNQ++Y+KI+ AI++R+K+QR IE    LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  360  DKLAKGMIDAESFRKQTHLMNQKHKTISSISDNQLQTSLQKVIQKSFTLNMLHPYIDEIR  419
            +KLA+G+IDAE+FR QT+ + Q+ +  +SI+++Q+Q ++Q++IQK FTLN+L PYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  420  ITKNKALVGIYFKNEPLNIVNQTSQSSIA  448
            ITK+K L+GIYFKNEPLNIVNQ+ QSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

35) ccrA in NC_017341


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  570 bits (2152),  Expect = 6e-164, Method: Compositional matrix adjust.
 Identities = 327/449 (73%), Positives = 402/449 (90%), Gaps = 1/449 (0%)

Query  1    MKRAIGYLRQSTTKQQSLPAQKQAIELLAPKHNIQNIQYISDKQSGRTDNRTGYQQVTER  60
            MK+ IGYLRQST KQQSL+AQKQAIE +A KH+IQ+I++ SDKQSGR DNR+GY+QVT+ 
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQRQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQ QCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  MSLAELESDNIGEQVKNGLREKAKQGKLITTHAPFGYHYQNGTFIINNDESPTVKAVFNY  180
            +SLAELESDNIGEQV+NGL+EKAKQG+LITTHAPFGY+Y+NGTFIIN++ESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEDDNKLITRKPYQVRNIIMNPNYCGRVINQYGQYNNMVPPIVSATK  240
            Y++G GYKKIAQ LE+DN  I R+PYQVRNII+NPNYCGRV NQYGQ++NM P+IVS++ 
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEHAQAIRNKKQLHCIPSENQLKQKIKCPCCDSTLTNMTIRKK-HTLRYYICPKNMNESR  299
            YE+AQ +R++KQ    +S+NQLKQKIKCPCC++TLTNMTIRKK HTLRYY+CPKNMN SR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  300  FVCSFKGINAQKLEVQVLATCQNFFQNQQLYSKINNAIHQRLKKQRVIEAKSTLTQEQLI  359
            FVC FKGINAQ LE +VL  C++F+QNQ++Y+KI+ AI++R+K+QR IE    LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  360  DKLAKGMIDAESFRKQTHLMNQKHKTISSISDNQLQTSLQKVIQKSFTLNMLHPYIDEIR  419
            +KLA+G+IDAE+FR QT+ + Q+ +  +SI+++Q+Q ++Q++IQK FTLN+L PYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  420  ITKNKALVGIYFKNEPLNIVNQTSQSSIA  448
            ITK+K L+GIYFKNEPLNIVNQ+ QSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

36) SAT0131_00056 in NC_017347


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  570 bits (2152),  Expect = 6e-164, Method: Compositional matrix adjust.
 Identities = 327/449 (73%), Positives = 402/449 (90%), Gaps = 1/449 (0%)

Query  1    MKRAIGYLRQSTTKQQSLPAQKQAIELLAPKHNIQNIQYISDKQSGRTDNRTGYQQVTER  60
            MK+ IGYLRQST KQQSL+AQKQAIE +A KH+IQ+I++ SDKQSGR DNR+GY+QVT+ 
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQRQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQ QCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  MSLAELESDNIGEQVKNGLREKAKQGKLITTHAPFGYHYQNGTFIINNDESPTVKAVFNY  180
            +SLAELESDNIGEQV+NGL+EKAKQG+LITTHAPFGY+Y+NGTFIIN++ESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEDDNKLITRKPYQVRNIIMNPNYCGRVINQYGQYNNMVPPIVSATK  240
            Y++G GYKKIAQ LE+DN  I R+PYQVRNII+NPNYCGRV NQYGQ++NM P+IVS++ 
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEHAQAIRNKKQLHCIPSENQLKQKIKCPCCDSTLTNMTIRKK-HTLRYYICPKNMNESR  299
            YE+AQ +R++KQ    +S+NQLKQKIKCPCC++TLTNMTIRKK HTLRYY+CPKNMN SR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  300  FVCSFKGINAQKLEVQVLATCQNFFQNQQLYSKINNAIHQRLKKQRVIEAKSTLTQEQLI  359
            FVC FKGINAQ LE +VL  C++F+QNQ++Y+KI+ AI++R+K+QR IE    LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  360  DKLAKGMIDAESFRKQTHLMNQKHKTISSISDNQLQTSLQKVIQKSFTLNMLHPYIDEIR  419
            +KLA+G+IDAE+FR QT+ + Q+ +  +SI+++Q+Q ++Q++IQK FTLN+L PYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  420  ITKNKALVGIYFKNEPLNIVNQTSQSSIA  448
            ITK+K L+GIYFKNEPLNIVNQ+ QSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

37) ccrA in NC_017331


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  570 bits (2152),  Expect = 6e-164, Method: Compositional matrix adjust.
 Identities = 327/449 (73%), Positives = 402/449 (90%), Gaps = 1/449 (0%)

Query  1    MKRAIGYLRQSTTKQQSLPAQKQAIELLAPKHNIQNIQYISDKQSGRTDNRTGYQQVTER  60
            MK+ IGYLRQST KQQSL+AQKQAIE +A KH+IQ+I++ SDKQSGR DNR+GY+QVT+ 
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   IQQRQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIF  120
            IQQ QCD+LCCYRLNRLHRNLKNALKL+KLCQ YHVHILSVHDGYFDMD+AFDRLKLNIF
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  MSLAELESDNIGEQVKNGLREKAKQGKLITTHAPFGYHYQNGTFIINNDESPTVKAVFNY  180
            +SLAELESDNIGEQV+NGL+EKAKQG+LITTHAPFGY+Y+NGTFIIN++ESPTVKAVFNY
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGYGYKKIAQYLEDDNKLITRKPYQVRNIIMNPNYCGRVINQYGQYNNMVPPIVSATK  240
            Y++G GYKKIAQ LE+DN  I R+PYQVRNII+NPNYCGRV NQYGQ++NM P+IVS++ 
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  YEHAQAIRNKKQLHCIPSENQLKQKIKCPCCDSTLTNMTIRKK-HTLRYYICPKNMNESR  299
            YE+AQ +R++KQ    +S+NQLKQKIKCPCC++TLTNMTIRKK HTLRYY+CPKNMN SR
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  300  FVCSFKGINAQKLEVQVLATCQNFFQNQQLYSKINNAIHQRLKKQRVIEAKSTLTQEQLI  359
            FVC FKGINAQ LE +VL  C++F+QNQ++Y+KI+ AI++R+K+QR IE    LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  360  DKLAKGMIDAESFRKQTHLMNQKHKTISSISDNQLQTSLQKVIQKSFTLNMLHPYIDEIR  419
            +KLA+G+IDAE+FR QT+ + Q+ +  +SI+++Q+Q ++Q++IQK FTLN+L PYI+ I+
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  420  ITKNKALVGIYFKNEPLNIVNQTSQSSIA  448
            ITK+K L+GIYFKNEPLNIVNQ+ QSSIA
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQAMQSSIA  449

38) BN843_350 in NC_021059


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  393 bits (1480),  Expect = 9e-111, Method: Compositional matrix adjust.
 Identities = 221/443 (50%), Positives = 343/443 (78%), Gaps = 1/443 (0%)

Query  1    MEEAIAYVRQSTLKQQSLATQKSLIMDTAKQYGWSNVAFYDDKKTGRHTKRSGYQKMVEI  60
            M + I+Y+RQST+KQQSLA+QK  I   A +    ++ FY DK++GR  +RSGY+++ ++
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   ITSGKCKVLCCYRLNRLHRNLKNAIQFFEICKKHHITIISVNDGYFDLSKEFDCFRLNIL  120
            I  G+C +LCCYRLNRLHRNLKNA++++ +C+  H+ I+SV+DGYFD+ + FD ++LNI+
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  MSLAEMESNNISEQTKNGIREKAKQGKLITTHAPFGYRYRKGCFVVQEEEAYTVKSVYRW  180
            +SLAE+ES+NI+EQ +NG++EKAKQG+LITTHAPFGY Y++G F+++++E+ TVK+V+  
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGLGYKKISQHLDSNPNLIPRKPYQVRNILLNPNYCGRVINKYGTFNDIVPPIIDIDT  240
            Y++G GYKKI+Q L+ +   I R+PYQVRNI++NPNYCGRV N+YG F+++ P+I+    
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  FEEAQERRIHKQlnrsnsrnklkrrIKCPYCQSTLTNLTIKKENYSLRYYVCPKNMNDAY  300
            +E+AQ  R +KQ ++++S N+LK++IKCP C++TLTN+TI+K N +LRYYVCPKNMN + 
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  RTCPFKSINAPELESEVLDTCKKYFEEQSFHKRLNNTILKVLKQQQMKHKETHLTQEQLI  360
              C FK+INA  LE  VL+ C+ ++++Q +  +++ +I K +K+Q+  +K+  LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQNRIDVKTFKRLSASCKSE-ENYSTYSTYQIDDKLKYVIKNKITLQDIAPFIDCIK  419
            EKLAQ  ID  TF+  + S + + +  ++ +  QI++ ++ +I++++TL+ + P+I+ I 
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  420  ITQTKQLQGIYFKNSPLNIVEQS  442
            IT+ K+L GIYFKN PLNIV+Q+
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQA  443

39) SE0057 in NC_004461


> NC_004461_R1|15|G15|27466955|NP_763592.1|Staphylococcus_epidermidis_ATCC_12228|-|12061..13410|-|SE0037|cassette 
chromosome 
recombinase A
Length=449

 Score =  393 bits (1480),  Expect = 9e-111, Method: Compositional matrix adjust.
 Identities = 221/443 (50%), Positives = 343/443 (78%), Gaps = 1/443 (0%)

Query  1    MEEAIAYVRQSTLKQQSLATQKSLIMDTAKQYGWSNVAFYDDKKTGRHTKRSGYQKMVEI  60
            M + I+Y+RQST+KQQSLA+QK  I   A +    ++ FY DK++GR  +RSGY+++ ++
Sbjct  1    MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQVTQL  60

Query  61   ITSGKCKVLCCYRLNRLHRNLKNAIQFFEICKKHHITIISVNDGYFDLSKEFDCFRLNIL  120
            I  G+C +LCCYRLNRLHRNLKNA++++ +C+  H+ I+SV+DGYFD+ + FD ++LNI+
Sbjct  61   IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIF  120

Query  121  MSLAEMESNNISEQTKNGIREKAKQGKLITTHAPFGYRYRKGCFVVQEEEAYTVKSVYRW  180
            +SLAE+ES+NI+EQ +NG++EKAKQG+LITTHAPFGY Y++G F+++++E+ TVK+V+  
Sbjct  121  ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYHNGTFIINQNESPTVKAVFNY  180

Query  181  YLQGLGYKKISQHLDSNPNLIPRKPYQVRNILLNPNYCGRVINKYGTFNDIVPPIIDIDT  240
            Y++G GYKKI+Q L+ +   I R+PYQVRNI++NPNYCGRV N+YG F+++ P+I+    
Sbjct  181  YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI  240

Query  241  FEEAQERRIHKQlnrsnsrnklkrrIKCPYCQSTLTNLTIKKENYSLRYYVCPKNMNDAY  300
            +E+AQ  R +KQ ++++S N+LK++IKCP C++TLTN+TI+K N +LRYYVCPKNMN + 
Sbjct  241  YEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASR  300

Query  301  RTCPFKSINAPELESEVLDTCKKYFEEQSFHKRLNNTILKVLKQQQMKHKETHLTQEQLI  360
              C FK+INA  LE  VL+ C+ ++++Q +  +++ +I K +K+Q+  +K+  LTQEQLI
Sbjct  301  FVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHILTQEQLI  360

Query  361  EKLAQNRIDVKTFKRLSASCKSE-ENYSTYSTYQIDDKLKYVIKNKITLQDIAPFIDCIK  419
            EKLAQ  ID  TF+  + S + + +  ++ +  QI++ ++ +I++++TL+ + P+I+ I 
Sbjct  361  EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH  420

Query  420  ITQTKQLQGIYFKNSPLNIVEQS  442
            IT+ K+L GIYFKN PLNIV+Q+
Sbjct  421  ITKDKNLIGIYFKNEPLNIVNQA  443