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Homologs of nrdI-2 gene of NC_002976_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) nrdI-2
( YP_189080.1 )

nrdI protein

NC_002976
(Staphylococcus epidermidis RP62A)

6e-60

100

2) nrdI
( YP_005732026.1 )

phage protein NrdI

NC_017331
(Staphylococcus aureus TW20)

5e-59

3) nrdI
( YP_005959418.1 )

protein nrdI

NC_017542
(Paenibacillus polymyxa M1)

2e-17

4) PPSC2_c1971
( YP_003946184.1 )

ribonucleotide reductase stimulatory protein

NC_014622
(Paenibacillus polymyxa SC2)

2e-17

5) nrdI
( YP_003870148.1 )

NrdI protein

NC_014483
(Paenibacillus polymyxa E681)

8e-17

6) nrdI
( YP_005076438.1 )

ribonucleotide reductase stimulatory protein

NC_016641
(Paenibacillus terrae HPL-003)

1e-16

7) nrdI
( YP_002772617.1 )

ribonucleotide reductase stimulatory protein

NC_012491
(Brevibacillus brevis NBRC 100599)

2e-16

8) nrdI
( YP_001374394.1 )

ribonucleotide reductase stimulatory protein

NC_009674
(Bacillus cytotoxicus NVH 391-98)

4e-15

9) nrdI
( YP_612515.1 )

ribonucleotide reductase stimulatory protein

NC_008044
(Ruegeria sp. TM1040)

5e-15

10) nrdI
( YP_002559885.1 )

ribonucleotide reductase stimulatory protein

NC_011999
(Macrococcus caseolyticus JCSC5402)

7e-15

11) nrdI
( NP_831134.1 )

ribonucleotide reductase stimulatory protein

NC_004722
(Bacillus cereus ATCC 14579 )

1e-14

12) nrdI
( YP_002366133.1 )

ribonucleotide reductase stimulatory protein

NC_011725
(Bacillus cereus B4264)

1e-14

13) nrdI
( YP_002444794.1 )

ribonucleotide reductase stimulatory protein

NC_011772
(Bacillus cereus G9842)

1e-14

14) HD73_1582
( YP_007420681.1 )

ribonucleotide reductase stimulatory protein

NC_020238
(Bacillus cereus HD73)

1e-14

15) nrdI
( YP_003663731.1 )

ribonucleotide reductase stimulatory protein

NC_014171
(Bacillus thuringiensis BMB171)

1e-14

16) nrdI
( YP_006926026.1 )

protein NrdI

NC_018877
(Bacillus thuringiensis Bt407)

1e-14

17) nrdI
( YP_005571261.1 )

ribonucleotide reductase stimulatory protein

NC_017208
(Bacillus thuringiensis CT-43)

1e-14

18) nrdI
( YP_006604281.1 )

ribonucleotide reductase stimulatory protein

NC_018500
(Bacillus thuringiensis HD-771)

1e-14

19) nrdI
( YP_006609034.1 )

ribonucleotide reductase stimulatory protein

NC_018508
(Bacillus thuringiensis HD-789)

1e-14

20) H175_ch1298
( YP_007477759.1 )

Ribonucleotide reduction protein NrdI

NC_020376
(Bacillus thuringiensis IS5056)

1e-14

21) nrdI
( YP_035574.1 )

ribonucleotide reductase stimulatory protein

NC_005957
(Bacillus thuringiensis 97-27)

1e-14

22) SAMSHR1132_06750
( YP_005325199.1 )

protein NrdI

NC_016941
(Staphylococcus aureus MSHR1132)

3e-14

23) nrdI
( YP_254078.1 )

ribonucleotide reductase stimulatory protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

4e-14

24) nrdI
( YP_007385691.1 )

ribonucleotide reductase stimulatory protein

NC_020164
(Staphylococcus warneri SG1)

6e-14

25) nrdI
( YP_005175562.1 )

ribonucleotide reductase stimulatory protein

NC_016807
(Mycoplasma pneumoniae 309)

1e-12

26) nrdI
( YP_005881341.1 )

NrdI protein

NC_017504
(Mycoplasma pneumoniae FH)

1e-12

27) nrdI
( NP_110011.1 )

ribonucleotide reductase stimulatory protein

NC_000912
(Mycoplasma pneumoniae M129)

1e-12

28) C985_0329
( YP_007347929.1 )

Ribonucleoside-diphosphate reductase, flavodoxin-like subunit

NC_020076
(Mycoplasma pneumoniae M129-B7)

1e-12

29) nrdI
( YP_008292201.1 )

ribonucleotide reductase

NC_021833
(Spiroplasma diminutum CUAS-1)

6e-12

30) nrdI
( YP_004560452.1 )

ribonucleotide reductase stimulatory protein

NC_015601
(Erysipelothrix rhusiopathiae Fujisawa)

1e-09

31) K210_08980
( YP_008074307.1 )

ribonucleotide reductase stimulatory protein

NC_021354
(Erysipelothrix rhusiopathiae SY1027)

1e-09

• Sequence Alignments

1) nrdI-2 in NC_002976


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score =  223 bits (831),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)

Query  1    MDKRESISVPSKLSLAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTY  60
            MDKRESISVPSKLSLAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTY
Sbjct  1    MDKRESISVPSKLSLAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTY  60

Query  61   DFGEVPAPVETFLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAG  120
            DFGEVPAPVETFLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAG
Sbjct  61   DFGEVPAPVETFLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAG  120

Query  121  NMVDVNKLVDYIKGRVM  137
            NMVDVNKLVDYIKGRVM
Sbjct  121  NMVDVNKLVDYIKGRVM  137

2) nrdI in NC_017331


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score =  220 bits (819),  Expect = 5e-59, Method: Compositional matrix adjust.
 Identities = 134/137 (98%), Positives = 136/137 (99%), Gaps = 0/137 (0%)

Query  5    VDKRENISVPSKLSLAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTY  64
            +DKRE+ISVPSKLSLAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTY
Sbjct  1    MDKRESISVPSKLSLAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTY  60

Query  65   DFGEVPAPVETFLENETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAG  124
            DFGEVPAPVETFL NETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAG
Sbjct  61   DFGEVPAPVETFLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAG  120

Query  125  NMVDVNKLVDYIKGRVM  141
            NMVDVNKLVDYIKGRVM
Sbjct  121  NMVDVNKLVDYIKGRVM  137

3) nrdI in NC_017542


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 82.8 bits (295),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 48/115 (42%), Positives = 84/115 (74%), Gaps = 9/115 (7%)

Query  3    IAYDSKTGNVKRFINKLKLPAVQIE------EQMTIEEPYVLITYTTGFGQIPERVSSFL  56
            +AY S+T +  RF++K+ L  +QI+      E + I+++YVLIT T +FG++P  V +FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   KKNAQ--NLVGVAASGNRNWGDKFAKSADLIADHYNVPVISKFELSGTFGDVERF  109
            K++++  NL++V +SGNRNWG +FA ++D I+ ++NV +I+K+EL+G   DV+++
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKL  128

4) PPSC2_c1971 in NC_014622


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 82.8 bits (295),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 48/115 (42%), Positives = 84/115 (74%), Gaps = 9/115 (7%)

Query  3    IAYDSKTGNVKRFINKLKLPAVQIE------EQMTIEEPYVLITYTTGFGQIPERVSSFL  56
            +AY S+T +  RF++K+ L  +QI+      E + I+++YVLIT T +FG++P  V +FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   KKNAQ--NLVGVAASGNRNWGDKFAKSADLIADHYNVPVISKFELSGTFGDVERF  109
            K++++  NL++V +SGNRNWG +FA ++D I+ ++NV +I+K+EL+G   DV+++
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKL  128

5) nrdI in NC_014483


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 80.5 bits (286),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 48/115 (42%), Positives = 84/115 (74%), Gaps = 9/115 (7%)

Query  3    IAYDSKTGNVKRFINKLKLPAVQIE------EQMTIEEPYVLITYTTGFGQIPERVSSFL  56
            +AY S+T +  RF++K+ L  +QI+      E + I+++YVLIT T +FG++P  V +FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   KKNAQ--NLVGVAASGNRNWGEKFAKSADLIAYHYNVPVISKFELSGTSGDVERF  109
            K++++  NL++V +SGNRNWG +FA ++D I+ ++NV +I+K+EL+G   DV+++
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKL  128

6) nrdI in NC_016641


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 80.0 bits (284),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 48/115 (42%), Positives = 83/115 (73%), Gaps = 9/115 (7%)

Query  3    IAYDSKTGNVKRFIGKLKLPAVQIQ------EQMTIEEPYVLITYTTGFGQIPEKVSSFL  56
            +AY S+T +  RF+ K+ L  +QI+      E + I+++YVLIT T +FG++P  V +FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   QKNSK--NLVGVAASGNRNWGECFAKSADLISNHYNVPVISKFELSGTFGDVERF  109
            +++++  NL++V +SGNRNWG  FA ++D IS+++NV +I+K+EL+G   DV+++
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKL  128

7) nrdI in NC_012491


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 78.9 bits (280),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 50/117 (43%), Positives = 82/117 (71%), Gaps = 9/117 (7%)

Query  3    IAYDSKTGNVRRFVNKINLPHVEIDQDMVLDEP------FILITYTTGFGQVPEKVATFL  56
            +AY S+T +  RF++K+ L +++ID + + DEP      ++LIT T +FG+VP  V TFL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   KR--NHVHLRGVSASGNRNWGTSFAKSADTIASQYGVPVISKFELSGTGRDVEQFTS  111
            K   N+ +L +V +SGNRNWGT+FA ++DTI+ ++ V +I+K+EL+G   DV+++  
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVD  130

8) nrdI in NC_009674


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 74.7 bits (264),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 51/122 (42%), Positives = 81/122 (67%), Gaps = 11/122 (9%)

Query  3    IAYDSMTGNVKRFINK-LNMLAVQI----SEDLVIDEEFVLITYTTGFGNVPERVLEFL-  56
            +AY S T +  RF++K L+ + +++     E L I++ +VLIT T +FG+VP  V  FL 
Sbjct  15   LAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFLK  74

Query  57   -ERNNANLKGVSASGNRNWGDMFGASADKISMKYEVPIVSKFELSGT----NKDVEYFKE  111
             E N+ NL +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G     NK V+Y+K 
Sbjct  75   NETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIKG  134

Query  112  RV  113
            RV
Sbjct  135  RV  136

9) nrdI in NC_008044


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 49/122 (41%), Positives = 82/122 (68%), Gaps = 9/122 (7%)

Query  2    VGLVYYSSRSGNTARLMERLGLEALRL---PQTEPSPEVDAPYVLVTPTFADGEGRGAVP  58
            ++L YYS R+ +T R+ME++ LE +++      + + E++ +YVL+TPT+  GE    VP
Sbjct  13   LSLAYYS-RTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGE----VP  66

Query  59   KPVIKFLNNSRNRALLRGVIAGGNRNFGDTFALAGDVIAKKCNVPVLYRFELAGTETDIA  118
             PV  FL+N  N+  L +V+++GNRN G  FA+AGD I+K+ NV ++ ++ELAG   D+ 
Sbjct  67   APVETFLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVN  126

Query  119  RM  120
            ++
Sbjct  127  KL  128

10) nrdI in NC_011999


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.9 bits (261),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 48/114 (43%), Positives = 74/114 (65%), Gaps = 6/114 (5%)

Query  3    IVYYSLTGNVKRFIQKTKYTNTLTL----DQAEGINEPYIIVTGTIGFGEIPDPVRQFL-  57
            + YYS T +  RF++K      + +    D++  IN++Y+++T T +FGE+P PV  FL 
Sbjct  15   LAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFLK  74

Query  58   -DRHSANLLAVAASGNRNWGQNYARAGDLISSTYHVPLLMKFELHGNDNDVKEF  110
             + +  NL+AV +SGNRNWG N+A AGD IS  ++V L+ K+EL GN  DV+ +
Sbjct  75   NETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKL  128

11) nrdI in NC_004722


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    VAYDSMTGNVKRFIHKLNMPAVQID------EDLVIDEDFILITYTTGFGNVPERVLDFL  56
            +AY S T +  RF++K+ +  +QID      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

12) nrdI in NC_011725


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    VAYDSMTGNVKRFIHKLNMPAVQID------EDLVIDEDFILITYTTGFGNVPERVLDFL  56
            +AY S T +  RF++K+ +  +QID      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

13) nrdI in NC_011772


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    VAYDSMTGNVKRFIHKLNMPAVQID------EDLVIDEDFILITYTTGFGNVPERVLDFL  56
            +AY S T +  RF++K+ +  +QID      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

14) nrdI in NC_014171


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    VAYDSMTGNVKRFIHKLNMPAVQID------EDLVIDEDFILITYTTGFGNVPERVLDFL  56
            +AY S T +  RF++K+ +  +QID      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

15) nrdI in NC_018877


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    VAYDSMTGNVKRFIHKLNMPAVQID------EDLVIDEDFILITYTTGFGNVPERVLDFL  56
            +AY S T +  RF++K+ +  +QID      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

16) nrdI in NC_018500


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    VAYDSMTGNVKRFIHKLNMPAVQID------EDLVIDEDFILITYTTGFGNVPERVLDFL  56
            +AY S T +  RF++K+ +  +QID      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

17) nrdI in NC_018508


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    VAYDSMTGNVKRFIHKLNMPAVQID------EDLVIDEDFILITYTTGFGNVPERVLDFL  56
            +AY S T +  RF++K+ +  +QID      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

18) nrdI in NC_017208


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    VAYDSMTGNVKRFIHKLNMPAVQID------EDLVIDEDFILITYTTGFGNVPERVLDFL  56
            +AY S T +  RF++K+ +  +QID      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

19) H175_ch1298 in NC_020376


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    VAYDSMTGNVKRFIHKLNMPAVQID------EDLVIDEDFILITYTTGFGNVPERVLDFL  56
            +AY S T +  RF++K+ +  +QID      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

20) HD73_1582 in NC_020238


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    VAYDSMTGNVKRFIHKLNMPAVQID------EDLVIDEDFILITYTTGFGNVPERVLDFL  56
            +AY S T +  RF++K+ +  +QID      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

21) nrdI in NC_005957


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 73.1 bits (258),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 81/123 (66%), Gaps = 13/123 (10%)

Query  3    LAYDSMTGNVKRFIHKLNMPAVQIG------EDLVIDEDFILITYTTGFGNVPERVLEFL  56
            LAY S T +  RF++K+ +  +QI+      E L I++ ++LIT T +FG+VP  V  FL
Sbjct  15   LAYYSRTRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFL  73

Query  57   --ERNNEKLKGVSASGNRNWGDMFGASADKISAKYEVPIVSKFELSGTNND----VEYFK  110
              E N+++L +V +SGNRNWG  F+ ++D IS +++V +++K+EL+G   D    V+Y+K
Sbjct  74   KNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKLVDYIK  133

Query  111  ERV  113
             RV
Sbjct  134  GRV  136

22) SAMSHR1132_06750 in NC_016941


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 71.8 bits (253),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 46/114 (41%), Positives = 78/114 (69%), Gaps = 5/114 (4%)

Query  1    MKIIYFSFTGNVRRFIKRT--ELENTLEITADNCMEPVNEPFIIVTGTIGFGEVPKPVQS  58
            + + Y+S T +  RF+ +   +++  ++   D+ +E +N++++++T T +FGEVP PV++
Sbjct  13   LSLAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLE-INNSYVLITPTYDFGEVPAPVET  71

Query  59   FL--EVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFELHGKNKDV  110
            FL  E N++ + +V +SGNRNWG NFA AG TIS  +NV L+ K+EL G+  DV
Sbjct  72   FLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDV  125

23) nrdI in NC_007168


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 71.5 bits (252),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 47/114 (42%), Positives = 77/114 (68%), Gaps = 5/114 (4%)

Query  1    MKVVYFSFSGNVRRFIKR--SEISDVMEITKDNCTDPFEEPYILVTGTIGFGEVPKEVQS  58
            + + Y+S + +  RF+ +   +I   ++  KD+  + ++++Y+L+T T +FGEVP  V++
Sbjct  13   LSLAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLE-INNSYVLITPTYDFGEVPAPVET  71

Query  59   FL--EINHHNLRAVAASGNRNWGQNFAKAGRTISEEYHVPLLMKFEVQGSNKDV  110
            FL  E N++NL AV +SGNRNWG NFA AG TIS  ++V L+ K+E+ G+  DV
Sbjct  72   FLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDV  125

24) nrdI in NC_020164


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 70.8 bits (249),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 46/114 (41%), Positives = 75/114 (66%), Gaps = 5/114 (4%)

Query  1    MKVVYFSFSGNVRRFIKRA--EIENVMEITSDNCTDPINEPYILVTGTIGFGEVPQQVQS  58
            + + Y+S + +  RF+ +   +I+  ++   D+  + IN++Y+L+T T +FGEVP  V++
Sbjct  13   LSLAYYSRTRQTERFMEKVLEQIQIDVHRIKDEPLE-INNSYVLITPTYDFGEVPAPVET  71

Query  59   FL--DVNHSYLRAVAASGNRNWGQNFAKAGRSISEDYNVPLLMKFEVQGTNKDV  110
            FL  + N++ L AV +SGNRNWG NFA AG +IS  +NV L+ K+E+ G   DV
Sbjct  72   FLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDV  125

25) nrdI in NC_016807


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 66.6 bits (233),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 50/122 (41%), Positives = 81/122 (67%), Gaps = 10/122 (8%)

Query  22   VVYFSSISNNTHRFIEKLGFEHTRIPVNL--DEQIEVNQEYVLFCPTYSGGGEYTSGAVP  79
            + Y+S  + +T+RF+EK+ +E+ +I V+   DE +E+N+ YVL+ PTY    ++  G VP
Sbjct  15   LAYYSR-TRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTY----DF--GEVP  66

Query  80   KQVIHFLNNKHNRDLCRGVISSGNTNFGNTFAIAGPILSKKLNVPLLYQFELLGTKNDVE  139
              V  FL+N  N++   +V+SSGN N G  FAIAG  +SK++NV L+ ++EL G   DV+
Sbjct  67   APVETFLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVN  126

Query  140  QV  141
            ++
Sbjct  127  KL  128

26) nrdI in NC_017504


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 66.6 bits (233),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 50/122 (41%), Positives = 81/122 (67%), Gaps = 10/122 (8%)

Query  22   VVYFSSISNNTHRFIEKLGFEHTRIPVNL--DEQIEVNQEYVLFCPTYSGGGEYTSGAVP  79
            + Y+S  + +T+RF+EK+ +E+ +I V+   DE +E+N+ YVL+ PTY    ++  G VP
Sbjct  15   LAYYSR-TRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTY----DF--GEVP  66

Query  80   KQVIHFLNNKHNRDLCRGVISSGNTNFGNTFAIAGPILSKKLNVPLLYQFELLGTKNDVE  139
              V  FL+N  N++   +V+SSGN N G  FAIAG  +SK++NV L+ ++EL G   DV+
Sbjct  67   APVETFLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVN  126

Query  140  QV  141
            ++
Sbjct  127  KL  128

27) C985_0329 in NC_020076


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 66.6 bits (233),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 50/122 (41%), Positives = 81/122 (67%), Gaps = 10/122 (8%)

Query  22   VVYFSSISNNTHRFIEKLEFEHTRIPVN--LDEQIEVNQEYVLFCPTYSGGGEYTSGAVP  79
            + Y+S  + +T+RF+EK+ +E+ +I V+   DE +E+N+ YVL+ PTY    ++  G VP
Sbjct  15   LAYYSR-TRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTY----DF--GEVP  66

Query  80   KQVIHFLNNKHNRDLCRGVISSGNTNFGNTFAIAGPILSKKLNVPLLYQFELLGTKNDVE  139
              V  FL+N  N++   +V+SSGN N G  FAIAG  +SK++NV L+ ++EL G   DV+
Sbjct  67   APVETFLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVN  126

Query  140  QV  141
            ++
Sbjct  127  KL  128

28) nrdI in NC_000912


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 66.6 bits (233),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 50/122 (41%), Positives = 81/122 (67%), Gaps = 10/122 (8%)

Query  22   VVYFSSISNNTHRFIEKLEFEHTRIPVN--LDEQIEVNQEYVLFCPTYSGGGEYTSGAVP  79
            + Y+S  + +T+RF+EK+ +E+ +I V+   DE +E+N+ YVL+ PTY    ++  G VP
Sbjct  15   LAYYSR-TRQTERFMEKV-LEQIQIDVHRIKDEPLEINNSYVLITPTY----DF--GEVP  66

Query  80   KQVIHFLNNKHNRDLCRGVISSGNTNFGNTFAIAGPILSKKLNVPLLYQFELLGTKNDVE  139
              V  FL+N  N++   +V+SSGN N G  FAIAG  +SK++NV L+ ++EL G   DV+
Sbjct  67   APVETFLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVN  126

Query  140  QV  141
            ++
Sbjct  127  KL  128

29) nrdI in NC_021833


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 64.2 bits (224),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 49/119 (42%), Positives = 75/119 (64%), Gaps = 8/119 (6%)

Query  24   YFSSISNNTHRFMDK-LDVSDARIPYELNQELIVDKEYVLITPTYAGGGGDTKGAVPAQV  82
            Y+S  + +T+RFM+K L+  +  +    ++ L +++ YVLITPTY  G       VPA V
Sbjct  17   YYSR-TRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTYDFG------EVPAPV  69

Query  83   IKFLNNENNRHLCRGVIASGNTNFGDTFAIAGPIISKKLNVPLLYQFELLGTQNDVESI  141
              FL+NE N++   +V++SGN N G  FAIAG  ISK++NV L+ ++EL G   DV+ +
Sbjct  70   ETFLKNETNQNNLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVNKL  128

30) nrdI in NC_015601


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 43/106 (41%), Positives = 64/106 (61%), Gaps = 7/106 (6%)

Query  9    TGQCQRFAEK-LGVPCIDI--LDYEP--IDEDIFLVTRSWDFGKVTEETKVFLEHEAA--  61
            T Q +RF EK L    ID+  +  EP  I++   L+T + DFG V      FL +E+   
Sbjct  21   TRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFLKNETNQN  80

Query  62   KVIGLAVGGNRNWGTNFGAAGDKIHHEYNIELVLKFEGSGFTKDVE  107
            ++I++  +GNRNWGTNF+ AGD I   +N+EL+ K+E +G   DV+
Sbjct  81   NLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVN  126

31) K210_08980 in NC_021354


> NC_002976_P2|15|G15|57867422|YP_189080.1|Staphylococcus_epidermidis_RP62A|-|11321..11734|nrdI-2|SERP1515|nrdI 
protein
Length=137

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 43/106 (41%), Positives = 64/106 (61%), Gaps = 7/106 (6%)

Query  9    TGQCQRFAEK-LGVPCIDI--LDYEP--IDEDIFLVTRSWDFGKVTEETKVFLEHEAA--  61
            T Q +RF EK L    ID+  +  EP  I++   L+T + DFG V      FL +E+   
Sbjct  21   TRQTERFMEKVLEQIQIDVHRIKDEPLEINNSYVLITPTYDFGEVPAPVETFLKNETNQN  80

Query  62   KVIGLAVGGNRNWGTNFGAAGDKIHHEYNIELVLKFEGSGFTKDVE  107
            ++I++  +GNRNWGTNF+ AGD I   +N+EL+ K+E +G   DV+
Sbjct  81   NLIAVMSSGNRNWGTNFAIAGDTISKRFNVELIGKYELAGNMVDVN  126