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Homologs of HP0535 gene of AB120416

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPSH_04240
( YP_001910313.1 )

cag pathogenicity island protein CagQ

NC_010698
(Helicobacter pylori Shi470)

8e-27

2) HPSAT_04095
( YP_005768463.1 )

cag pathogenicity island protein (cagQ, cag14)

NC_017359
(Helicobacter pylori Sat464)

1e-26

3) K751_08785
( YP_008357882.1 )

cag pathogenicity island protein

NC_021218
(Helicobacter pylori UM066)

2e-26

4) HPPN120_02610
( YP_005788198.1 )

cag pathogenicity island protein (cagQ, cag14)

NC_017378
(Helicobacter pylori Puno120)

7e-26

5) HPPC_02640
( YP_003926816.1 )

cag pathogenicity island protein (cagQ, cag14)

NC_014555
(Helicobacter pylori PeCan4)

2e-25

• Sequence Alignments

1) HPSH_04240 in NC_010698


> AB120416|15|G15|46091340|BAD13787.1|Helicobacter_pylori_F16|+|20055..20366|HP0535|-|cag 
pathogenicity island protein
Length=103

 Score =  113 bits (410),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 98/101 (98%), Positives = 100/101 (99%), Gaps = 0/101 (0%)

Query  1    MGKILASLLGGGTNLFMGLSSDlfsmilnflfflmlmmglNEILEKKFNLPMDNIKNFMT  60
            MGKILASLLGGGTNLF GLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMT
Sbjct  3    MGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMT  62

Query  61   EVLKNGFGSMKNMGSALIGNGFSSSKSDKTANKMGVPQVKL  101
            EVLKNGFGSMKNMGSALIGNGFSSSKS+KTANKM+VPQVKL
Sbjct  63   EVLKNGFGSMKNMGSALIGNGFSSSKSEKTANKMSVPQVKL  103

2) HPSAT_04095 in NC_017359


> AB120416|15|G15|46091340|BAD13787.1|Helicobacter_pylori_F16|+|20055..20366|HP0535|-|cag 
pathogenicity island protein
Length=103

 Score =  112 bits (408),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 97/101 (97%), Positives = 100/101 (99%), Gaps = 0/101 (0%)

Query  1    MGKILASLLGGGTNLFMGLSSDlfsmilnflfflmlmmglNEILEKKFNLPMDNIKNFMT  60
            MGKILASLLGGGTNLF GLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMT
Sbjct  3    MGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMT  62

Query  61   EVLKNGFGSMKNMGSALIGNGFGSSKSDKTANKMGVPQVKL  101
            EVLKNGFGSMKNMGSALIGNGF+SSKS+KTANKM+VPQVKL
Sbjct  63   EVLKNGFGSMKNMGSALIGNGFSSSKSEKTANKMSVPQVKL  103

3) K751_08785 in NC_021218


> AB120416|15|G15|46091340|BAD13787.1|Helicobacter_pylori_F16|+|20055..20366|HP0535|-|cag 
pathogenicity island protein
Length=103

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 99/101 (99%), Positives = 99/101 (99%), Gaps = 0/101 (0%)

Query  1    MGKILASLLGGGINLFTGLSSDlfsmilnflfflmlmmglNEILEKKFNLPMDNIKNFMT  60
            MGKILASLLGGG NLFTGLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMT
Sbjct  3    MGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMT  62

Query  61   EVLKNGFGSMKNMGSALIGNGFSSSKLEKTANKMSVPQVKL  101
            EVLKNGFGSMKNMGSALIGNGFSSSK EKTANKMSVPQVKL
Sbjct  63   EVLKNGFGSMKNMGSALIGNGFSSSKSEKTANKMSVPQVKL  103

4) HPPN120_02610 in NC_017378


> AB120416|15|G15|46091340|BAD13787.1|Helicobacter_pylori_F16|+|20055..20366|HP0535|-|cag 
pathogenicity island protein
Length=103

 Score =  109 bits (398),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 96/101 (96%), Positives = 99/101 (99%), Gaps = 0/101 (0%)

Query  1    MGKILASLLGGGTNLFMGLSSDlfsmilnflfflmlmmglNEILEKKFNLPMDNIKNFMA  60
            MGKILASLLGGGTNLF GLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFM+
Sbjct  3    MGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMT  62

Query  61   EVLKNGFGSMKNMGSALIGNGFSSSKSDKTANIMGVPQVKL  101
            EVLKNGFGSMKNMGSALIGNGFSSSKS+KTAN M+VPQVKL
Sbjct  63   EVLKNGFGSMKNMGSALIGNGFSSSKSEKTANKMSVPQVKL  103

5) HPPC_02640 in NC_014555


> AB120416|15|G15|46091340|BAD13787.1|Helicobacter_pylori_F16|+|20055..20366|HP0535|-|cag 
pathogenicity island protein
Length=103

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 96/101 (96%), Positives = 99/101 (99%), Gaps = 0/101 (0%)

Query  1    MGKILASLLGSGTNLFTGLSSDlfsmilnflfflmlmmglNEILEKKFNLPMDNIKNFMT  60
            MGKILASLLG+GTNLFTGLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMT
Sbjct  3    MGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMT  62

Query  61   EVLKNGFGSMKNMGSALIGNGFSSSKSDKTANKMGALQVKL  101
            EVLKNGFGSMKNMGSALIGNGFSSSKS+KTANKM+  QVKL
Sbjct  63   EVLKNGFGSMKNMGSALIGNGFSSSKSEKTANKMSVPQVKL  103