Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of unnamed gene of U39068

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) smpA
( YP_004872292.1 )

SmpA/OmlA family protein

NC_016041
(Glaciecola nitratireducens FR1064)

1e-09

• Sequence Alignments

1) smpA in NC_016041


> U39068|14|G14|1100887|AAA82718.1|Vibrio_cholerae_Ogawa_395|-|14278..14490|-|-|-
Length=70

 Score = 55.8 bits (192),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 31/69 (45%), Positives = 49/69 (72%), Gaps = 6/69 (8%)

Query  1   MTKEQVIYVLGRP-VVEDSFDEDTWYYIYEMKRGMSKRGEDFKKDLIISFED-GKLITVE  58
           M+K+QV +VLG P +VE+++  DTWYYIY+  +G   + +  +K+LI+ F+D GKL+ V 
Sbjct  1   MSKDQVRFVLGSPMLVENGY-PDTWYYIYHHTQG---HNDPVQKNLIVKFNDGGKLVNVA  56

Query  59  GDFELSEDF  67
           GDF  ++ F
Sbjct  57  GDFPAGDSF  65