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Homologs of ccrB3 gene of NC_017349_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ccrB3
( YP_005754051.1 )

site-specific recombinase CcrB3

NC_017349
(Staphylococcus aureus LGA251)

0.0

100

2) ccrB
( YP_008167247.1 )

cassette chromosome recombinase B

NC_021670
(Staphylococcus aureus Bmb9393)

0.0

3) ccrB
( YP_005743456.1 )

cassette chromosome recombinase B

NC_017341
(Staphylococcus aureus JKD6008)

0.0

4) dnaC
( YP_005751353.1 )

Cassette chromosome recombinase B3

NC_017347
(Staphylococcus aureus T0131)

0.0

5) ccrB
( YP_005730115.1 )

site-specific recombinase CcrB

NC_017331
(Staphylococcus aureus TW20)

0.0

6) BN843_700
( YP_007867149.1 )

Cassette chromosome recombinase B

NC_021059
(Staphylococcus aureus M1)

0.0

7) MS7_0069
( YP_005756536.1 )

resolvase, N terminal domain protein

NC_017351
(Staphylococcus aureus 11819-97)

0.0

8) SAKOR_00047
( YP_008490231.1 )

Site-specific recombinase

NC_022226
(Staphylococcus aureus CN1)

0.0

9) ccrB
( YP_492757.1 )

cassette chromosome recombinase B

NC_007793
(Staphylococcus aureus FPR3757)

0.0

10) ccrB
( YP_006236413.1 )

site-specific recombinase

NC_017763
(Staphylococcus aureus HO 5096 0412)

0.0

11) ccrB
( YP_005738212.1 )

cassette chromosome recombinase B

NC_017338
(Staphylococcus aureus JKD6159)

0.0

12) SAMSHR1132_00400
( YP_005324563.1 )

site-specific recombinase

NC_016941
(Staphylococcus aureus MSHR1132)

0.0

13) ccrB
( YP_001573963.1 )

cassette chromosome recombinase B

NC_010079
(Staphylococcus aureus TCH1516)

0.0

14) ccrB
( YP_005746510.1 )

site-specific recombinase

NC_017342
(Staphylococcus aureus TCH60)

0.0

15) ccrB
( YP_005740811.1 )

Cassette chromosome recombinase B

NC_017340
(Staphylococcus aureus 04-02981)

0.0

16) SaurJH1_0049
( YP_001315202.1 )

resolvase domain-containing protein

NC_009632
(Staphylococcus aureus JH1)

0.0

17) SaurJH9_0048
( YP_001245436.1 )

resolvase

NC_009487
(Staphylococcus aureus JH9)

0.0

18) ccrB
( YP_039530.1 )

site-specific recombinase

NC_002952
(Staphylococcus aureus MRSA252)

0.0

19) ccrB
( YP_001440650.1 )

cassette chromosome recombinase B

NC_009782
(Staphylococcus aureus Mu3)

0.0

20) ccrB
( NP_370585.1 )

cassette chromosome recombinase B

NC_002758
(Staphylococcus aureus Mu50)

0.0

21) ccrB
( NP_373297.1 )

cassette chromosome recombinase B

NC_002745
(Staphylococcus aureus N315)

0.0

22) SERP2499
( YP_190041.1 )

cassette chromosome recombinase B

NC_002976
(Staphylococcus epidermidis RP62A)

0.0

23) ccrB
( YP_008586687.1 )

cassette chromosome recombinase B

NC_022443
(Staphylococcus aureus SA40)

0.0

24) ccrB
( NP_644853.1 )

cassette chromosome recombinase B

NC_003923
(Staphylococcus aureus MW2)

0.0

25) SE0036
( NP_763591.1 )

cassette chromosome recombinase B

NC_004461
(Staphylococcus epidermidis ATCC 12228)

0.0

26) CA347_58
( YP_008126942.1 )

ogr/Delta-like zinc finger family protein

NC_021554
(Staphylococcus aureus CA-347)

0.0

27) SSP0035
( YP_300125.1 )

cassette chromosome recombinase B

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

0.0

28) ccrB
( YP_042165.1 )

site-specific recombinase

NC_002953
(Staphylococcus aureus MSSA476)

0.0

29) BN843_340
( YP_007867113.1 )

Cassette chromosome recombinase B

NC_021059
(Staphylococcus aureus M1)

0.0

30) SE0056
( NP_763611.1 )

cassette chromosome recombinase B

NC_004461
(Staphylococcus epidermidis ATCC 12228)

0.0

31) Lp16_0045
( YP_008119898.1 )

cassette chromosome recombinase B

NC_021514
(Lactobacillus plantarum 16)

5e-95

32) ccrB
( YP_006374886.1 )

cassette chromosome recombinase B

NC_017960
(Enterococcus faecium DO)

1e-84

33) BACI_c54540
( YP_003795137.1 )

DNA integration/recombination/invertion protein

NC_014335
(Bacillus cereus CI)

3e-84

34) BATR1942_18125
( YP_003975473.1 )

resolvase domain-containing protein

NC_014639
(Bacillus atrophaeus 1942)

1e-82

35) BCG9842_B5360
( YP_002449004.1 )

resolvase domain protein

NC_011772
(Bacillus cereus G9842)

7e-83

36) Bsph_4747
( YP_001700321.1 )

DNA recombinase

NC_010382
(Lysinibacillus sphaericus C3-41)

2e-80

37) BLi04323
( YP_006715586.1 )

phage resolvase

NC_006322
(Bacillus licheniformis DSM 13)

2e-65

38) spoIVCA
( YP_081392.1 )

site-specific DNA recombinase

NC_006270
(Bacillus licheniformis DSM 13)

2e-65

• Sequence Alignments

1) ccrB3 in NC_017349


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  852 bits (3228),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60
            MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120
            RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300
            YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  REIVKSDTviqqvvervnqenqvdvAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420
            REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480
            SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540
            ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  QI  542
            QI
Sbjct  541  QI  542

2) ccrB in NC_021670


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  818 bits (3097),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/542 (93%), Positives = 532/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEIQSTEGYSIDGQINQIREYCDFNNFVVVDVYADRGISGKSMN  60
            MQQLKQKRVGIYVRVSTE+QSTEGYSIDGQINQIREYC+FNNF VVDVYADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRLLKDANEGQIDSVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120
            RPELQRLLKDANEGQID VMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSIGSVTYILSNPFYVGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSI+S+TYILSNPFY+GKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWNEKRRKGLNDKPIIAEGKHSPIIIQDLWDKVQLRKKQVSQKPQVHGKGTNLLTGIV  300
            YKDWNEKRRKGLNDKPIIA+GKHSPII QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGIV
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIEKYVMDQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVINQVLERVNQENKVDIGALNHDIAYKQQQYDEVSGKLHNLVKTIEDNPDLT  420
             EIVKSD VI+QV+ERVNQEN+VD++ALNHDIAYKQQQ+DEV++K+ NLV+TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SALKATIHQYETQLNDITnqmnqlkqqqnqEKLSYDTKQIAALLQRIFQNIESMDKAQLK  480
            SA+K+TIHQYE+QLNDITNQMNQLK+QQNQEK SYD+KQIA LLQRIFQNI SMDK+QLK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLTVIDRIDIRKDGNHKKQFYVTLKLNNEIIKQLFNNTPLDEVLLSTSSLFLPQTLFL  540
            ALYLTVIDRIDIRKDG+HKKQFYVTLKLNNEIIKQLFNNT+LDEVLLSTSSLFLPQTL++
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  QI  542
            QI
Sbjct  541  QI  542

3) ccrB in NC_017341


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  818 bits (3097),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/542 (93%), Positives = 532/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEIQSTEGYSIDGQINQIREYCDFNNFVVVDVYADRGISGKSMN  60
            MQQLKQKRVGIYVRVSTE+QSTEGYSIDGQINQIREYC+FNNF VVDVYADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRLLKDANEGQIDSVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120
            RPELQRLLKDANEGQID VMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSIGSVTYILSNPFYVGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSI+S+TYILSNPFY+GKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWNEKRRKGLNDKPIIAEGKHSPIIIQDLWDKVQLRKKQVSQKPQVHGKGTNLLTGIV  300
            YKDWNEKRRKGLNDKPIIA+GKHSPII QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGIV
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIEKYVMDQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVINQVLERVNQENKVDIGALNHDIAYKQQQYDEVSGKLHNLVKTIEDNPDLT  420
             EIVKSD VI+QV+ERVNQEN+VD++ALNHDIAYKQQQ+DEV++K+ NLV+TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SALKATIHQYETQLNDITnqmnqlkqqqnqEKLSYDTKQIAALLQRIFQNIESMDKAQLK  480
            SA+K+TIHQYE+QLNDITNQMNQLK+QQNQEK SYD+KQIA LLQRIFQNI SMDK+QLK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLTVIDRIDIRKDGNHKKQFYVTLKLNNEIIKQLFNNTPLDEVLLSTSSLFLPQTLFL  540
            ALYLTVIDRIDIRKDG+HKKQFYVTLKLNNEIIKQLFNNT+LDEVLLSTSSLFLPQTL++
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  QI  542
            QI
Sbjct  541  QI  542

4) dnaC in NC_017347


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  818 bits (3097),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/542 (93%), Positives = 532/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEIQSTEGYSIDGQINQIREYCDFNNFVVVDVYADRGISGKSMN  60
            MQQLKQKRVGIYVRVSTE+QSTEGYSIDGQINQIREYC+FNNF VVDVYADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRLLKDANEGQIDSVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120
            RPELQRLLKDANEGQID VMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSIGSVTYILSNPFYVGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSI+S+TYILSNPFY+GKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWNEKRRKGLNDKPIIAEGKHSPIIIQDLWDKVQLRKKQVSQKPQVHGKGTNLLTGIV  300
            YKDWNEKRRKGLNDKPIIA+GKHSPII QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGIV
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIEKYVMDQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVINQVLERVNQENKVDIGALNHDIAYKQQQYDEVSGKLHNLVKTIEDNPDLT  420
             EIVKSD VI+QV+ERVNQEN+VD++ALNHDIAYKQQQ+DEV++K+ NLV+TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SALKATIHQYETQLNDITnqmnqlkqqqnqEKLSYDTKQIAALLQRIFQNIESMDKAQLK  480
            SA+K+TIHQYE+QLNDITNQMNQLK+QQNQEK SYD+KQIA LLQRIFQNI SMDK+QLK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLTVIDRIDIRKDGNHKKQFYVTLKLNNEIIKQLFNNTPLDEVLLSTSSLFLPQTLFL  540
            ALYLTVIDRIDIRKDG+HKKQFYVTLKLNNEIIKQLFNNT+LDEVLLSTSSLFLPQTL++
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  QI  542
            QI
Sbjct  541  QI  542

5) ccrB in NC_017331


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  818 bits (3097),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/542 (93%), Positives = 532/542 (99%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEIQSTEGYSIDGQINQIREYCDFNNFVVVDVYADRGISGKSMN  60
            MQQLKQKRVGIYVRVSTE+QSTEGYSIDGQINQIREYC+FNNF VVDVYADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRLLKDANEGQIDSVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120
            RPELQRLLKDANEGQID VMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSIGSVTYILSNPFYVGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSI+S+TYILSNPFY+GKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWNEKRRKGLNDKPIIAEGKHSPIIIQDLWDKVQLRKKQVSQKPQVHGKGTNLLTGIV  300
            YKDWNEKRRKGLNDKPIIA+GKHSPII QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGIV
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIEKYVMDQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVINQVLERVNQENKVDIGALNHDIAYKQQQYDEVSGKLHNLVKTIEDNPDLT  420
             EIVKSD VI+QV+ERVNQEN+VD++ALNHDIAYKQQQ+DEV++K+ NLV+TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SALKATIHQYETQLNDITnqmnqlkqqqnqEKLSYDTKQIAALLQRIFQNIESMDKAQLK  480
            SA+K+TIHQYE+QLNDITNQMNQLK+QQNQEK SYD+KQIA LLQRIFQNI SMDK+QLK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLTVIDRIDIRKDGNHKKQFYVTLKLNNEIIKQLFNNTPLDEVLLSTSSLFLPQTLFL  540
            ALYLTVIDRIDIRKDG+HKKQFYVTLKLNNEIIKQLFNNT+LDEVLLSTSSLFLPQTL++
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  QI  542
            QI
Sbjct  541  QI  542

6) BN843_700 in NC_021059


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  810 bits (3067),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 471/542 (87%), Positives = 522/542 (97%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMIYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVM+YKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVARVNQENKVDGAALHHDIAYKQQQYDEVQTKLNNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV RVNQEN+VD AAL+HDIAYKQQQ+DEV++K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKSLFDAKQISKLLQHIFQDIKHMEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++K+ +D+KQI+ LLQ+IFQ+I  M+K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRINIRKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRI+IRKDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

7) MS7_0069 in NC_017351


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  803 bits (3041),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ KI+NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

8) SAKOR_00047 in NC_022226


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  803 bits (3041),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ KI+NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

9) ccrB in NC_017763


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  803 bits (3041),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ KI+NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

10) ccrB in NC_017338


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  803 bits (3041),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ KI+NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

11) SAMSHR1132_00400 in NC_016941


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  803 bits (3041),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ KI+NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

12) ccrB in NC_017342


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  803 bits (3040),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  8    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  67
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  68   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  127
            RPELQR+LKDA+EG+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  128  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  187
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  188  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  247
            EANIVKYIFE YAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  248  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  307
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  308  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  367
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  368  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  427
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ KI+NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  428  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  487
            S I+P+I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  488  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  547
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  548  TI  549
             I
Sbjct  541  QI  542

13) ccrB in NC_007793


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  803 bits (3041),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ KI+NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

14) ccrB in NC_010079


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  803 bits (3041),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 519/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ KI+NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

15) ccrB in NC_017340


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  802 bits (3036),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 520/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++KP +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

16) SaurJH1_0049 in NC_009632


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  802 bits (3035),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/542 (87%), Positives = 520/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEINTS  120
            RPELQR+LKDA+EG IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERME+NTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++KP +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

17) SaurJH9_0048 in NC_009487


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  802 bits (3035),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/542 (87%), Positives = 520/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEINTS  120
            RPELQR+LKDA+EG IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERME+NTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++KP +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

18) ccrB in NC_002952


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  802 bits (3036),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/542 (87%), Positives = 520/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKDGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA++G IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++KP +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

19) ccrB in NC_009782


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  802 bits (3036),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 520/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++KP +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

20) ccrB in NC_002758


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  802 bits (3036),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 520/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++KP +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

21) ccrB in NC_002745


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  802 bits (3036),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/542 (87%), Positives = 520/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++KP +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

22) SERP2499 in NC_002976


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  802 bits (3036),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/542 (87%), Positives = 520/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKDGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA++G IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDITNQ+NQLK+QQN++KP +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

23) ccrB in NC_022443


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  799 bits (3026),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/542 (87%), Positives = 518/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFE YAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYDEVQIKINNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV +VNQENQVD AAL+HDIAYKQQQ+DEV+ KI+NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDIMNQINQFKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDI NQ+NQ+K+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLTVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYLTVIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

24) ccrB in NC_003923


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  797 bits (3015),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 463/542 (86%), Positives = 518/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKDGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA++G IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRANVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RA+VIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKIIERVVARVNQENQVDCASLHHDIAYKQQQYDEVQIKLNNLIKTIEDNPDLT  420
             EIVKSD +I++VV RVNQENQVD A+L+HDIAYKQQQ+DEV+ K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYEKQLNDITYQINQLKNQQNEDKTLFDAKEISKLLQHIFHDIKHIEKSRLK  480
            S I+P+I++YE QLNDIT Q+NQLK+QQN++K  +D+K+I+ LLQ+IF++I  ++K++LK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYL  540
            ALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

25) SE0036 in NC_004461


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  796 bits (3012),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 460/542 (85%), Positives = 517/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKFMN  60
            MQQLK KRVGIYVRVSTEMQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGK MN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRMLKDAKEGNIDCVMIYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG+IDCVM+YKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWNKVQIRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLW+KVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVARVNQENQVDCASLHHDIAYKQQQYDEVRIKLNNLIKTIEDNPDLT  420
             EIVKSD VIQ+VV RVNQENQVD A+L+HDIAYKQQQ+DEV  K++NL++TI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVIRPSIQKYDKQLNDIMSQINQLKKQQNEDKPSYNAKKIGKILRYVFHNIEKMKKSQLK  480
            S I+P+I++Y+ QLNDI +Q+NQLK QQN++KPSY++K+I+ +L+ +F+NI  M K+QLK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLAVIDRIDIRKDSNHKKQFYVTLKLDNEVIKQVFNDIPLDEVLLSTSSLFLPQPFYL  540
            ALYL+VIDRIDIRKD++HKKQFYVTLKL+NE+IKQ+FN+ +LDEVLLSTSSLFLPQ +Y+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  TI  542
             I
Sbjct  541  QI  542

26) CA347_58 in NC_021554


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  794 bits (3006),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 466/543 (86%), Positives = 518/543 (96%), Gaps = 1/543 (0%)

Query  1    MQQLKTKRVGIYVRVSTKMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMN  60
            MQQLK KRVGIYVRVST MQSTEGYSIDGQINQI+EYC+F++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RPELQR+LKDA+EG IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPNSKHELMINQH  180
            SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIP+SKHELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYIL+NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII  300
            YKDW+EKRRKGLNDKP+IA+GKHSPII+QDLWDKVQ RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQI  360
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIE YVM QI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIQRVVTHVNQENQVDGAALHHIVVAYKQQQYDEVQIKLNNLIKTIEDNPDL  420
             EIVKSD VIQ+VV +VNQENQVD AAL+H  +AYKQQQ+DEV+ K++NL++TI+DNPDL
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNH-DIAYKQQQFDEVNAKIKNLVQTIDDNPDL  419

Query  421  TSVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAKEISKLLQHIFHDIKHIEKSRL  480
            TS I+P+I++YE QLNDITNQ+NQLK+QQN++KP +D+K+I+ LLQ+IF++I  ++K++L
Sbjct  420  TSAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQL  479

Query  481  KALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLY  540
            KALYL+VIDRIDI+KDG+HKKQFYVTLKLNNEIIKQLFNN  LDEV LSTSSLFLPQTLY
Sbjct  480  KALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLY  539

Query  541  LTI  543
            + I
Sbjct  540  FQI  542

27) SSP0035 in NC_007350


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  778 bits (2945),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 461/542 (86%), Positives = 518/542 (96%), Gaps = 0/542 (0%)

Query  1    MQQLKQKRVGIYVRVSTEMQSAEGYSIDGQINQIKEYCNFHHFEVKDIYADRGISGKSMN  60
            MQQLKQKRVGIYVRVSTEMQS+EGYSIDGQINQI+EYCNF++F V D+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  61   RPALQRMLHDANKGHIDCVMVYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTS  120
            RP LQR+L DAN G+IDCVMVYKTNRLARNTSDLLKIVEDLH+QNVEFFSLSERMEVNTS
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  121  SGKLMLQILASFSEFERNTILENIYTGQHQRALEGYYQGNLPLGYNNIPDNKKDLMINQH  180
            SGKLMLQILASFSEFERN I+EN++ GQ +RA EGYYQGNLPLGY++IPD+K +LMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  181  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGNPFSISAVTYILSNPFYIGKIQFAK  240
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKG+PFSIS++TYILSNPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  241  YKDWNDKRRKGLNDKPVIAEGKHAPIIGKDLWDKVQARKKQVSEKPQVHGKGTNILTGLI  300
            YKDWN+KRRKGLNDKP+IA+GKH+PII++DLWDKVQARK+QVS+KPQVHGKGTN+LTG++
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  301  SCPQCSASMSASTTVNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  360
             CPQC+A+M+AS T NTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIEKYVMDQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  361  LEIVKSDKVIKQVVERVNQEHQIDMAALNHDIAYKQQQYDEVQIKLDNLIKTLEDNPDLT  420
             EIVKSD VI+QVVERVNQE+Q+D+AALNHDIAYKQQQ+DEV+ K+ NL++T++DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  421  SVLKNTIHQYEKQLNDittqinqlkqqqnqEKPSYDTKQIAALLQQIFQNVESMDKVQLK  480
            S +K TIHQYE QLNDIT Q+NQLK+QQNQEKPSYD+KQIA LLQ+IFQN+ SMDK QLK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  481  ALYLTVIDRIDIRKDGNHKKQFYVTLKLNNEIIKQLFNDTPLDEVLLSTSSLFLPQTLFL  540
            ALYLTVIDRIDIRKDG+HKKQFYVTLKLNNEIIKQLFN+T+LDEVLLSTSSLFLPQTL++
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  541  QI  542
            QI
Sbjct  541  QI  542

28) ccrB in NC_002953


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  751 bits (2843),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/542 (87%), Positives = 516/542 (96%), Gaps = 1/542 (0%)

Query  1    MDKMKKKLVGGYIRVSTERQ-VEGYSIEGQITQIEQYCQFNGYELVDIYADRGISGKSMN  59
            M+++K+K VG Y+RVSTE Q  EGYSI+GQI QI +YC+FN + +VD+YADRGISGKSMN
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  60   RPELQRMLNDAKNGKLDCVMVYKTNRLARNTSDLLTIVEELHRQNVEFFSLSERMEVKNS  119
            RPELQR+L+DA++G++DCVMVYKTNRLARNTSDLL IVE+LHRQNVEFFSLSERMEV+ S
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  120  TGKLMLQILASFSEFERNTILENIYNGQHQRALKGYYQGNLPLGYNNIPDNKKELMINQH  179
            +GKLMLQILASFSEFERN I+EN++ GQ +RA  GYYQGNLPLGY++IPD+K ELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  180  EANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGNPFSINSITYILVNPFYIGKIQFAK  239
            EANIVKYIFESYAKGHGYRKIANALNHKGY+TKKG+PFSI+SITYIL NPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  240  YKDWNEKRRKGLNDKPIIADGKHPPIISQELWDkvqsrkkqvsqkpqvHGKGTNLLTGII  299
            YKDWNEKRRKGLNDKPIIADGKH+PIISQ+LWDKVQ+RK+QVSQKPQVHGKGTNLLTGI+
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  300  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQI  359
            HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADVIEKYVMDQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  360  LEIVKSDKVLKQVVERVNQDNQVDVAALNHDIAYKQQQFDEVNIKLKNLVQTIEDNPDLT  419
             EIVKSD V++QVVERVNQ+NQVDVAALNHDIAYKQQQFDEVN K+KNLVQTI+DNPDLT
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  420  SALKPTIHQYETKLNDITnqmnqlkqqqnqEKPSYDTKQIAALLQRIFQNIESMDKSQLK  479
            SA+KPTIHQYE++LNDITNQMNQLK+QQNQEKPSYD+KQIA LLQRIFQNI SMDK+QLK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  480  ALYLTVIDRIDIRKDENHKKQFYVTLKLNNEIIKQLFNNNNLDEVLLSTSSLFLPQTLYF  539
            ALYLTVIDRIDIRKD +HKKQFYVTLKLNNEIIKQLFNN  LDEVLLSTSSLFLPQTLYF
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  540  QI  541
            QI
Sbjct  541  QI  542

29) BN843_340 in NC_021059


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  718 bits (2716),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/542 (75%), Positives = 492/542 (91%), Gaps = 1/542 (0%)

Query  1    MKQLKKKRIGLYARVSTEMQ-TDGYSIQGQLNQLTEYCQFQGYEVVNEYTDRGISGKTMQ  59
            M+QLK+KR+G+Y RVSTEMQ T+GYSI+GQ+NQ+ EYC+F+ + VV+ Y+DRGISGK+M+
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  60   RPELQRMLKDANEGKLDCIMVYKTNRLARNTSDLLNIVEELYKINVEFFSLTEKIEIASS  119
            RPELQR+LKDANEG++DC+MVYKTNRLARNTSDLL+IVE+L + NVEFFSL+E++E+ +S
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  120  TGKLMLQILASFAEFERNTIVENVYNGQRQRAIEGYYQGNLPLGYDKVPDSKKELMINQH  179
            +GKLMLQILASF+EFERN IVENV+ GQ +RA EGYYQGNLPLGYDK+PDSK ELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  180  EANIVKYIFDSYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYIISNPFYIGKIQFAK  239
            EANIVKYIF+SYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYI+SNPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  240  YRHWSDKRRKGLNEEPIIADGKHAPIIDRNLWDKVQFKRQESRKKPQVHGKGTNLLTGIV  299
            Y++W++KRRKGLN+ PIIADGKH+PII ++LWDKVQ ++Q+  +KPQVHGKGTNLLTGIV
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  300  KCPKCGAAMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVLEKYVMDQI  359
             CP+CGA+MAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADV+EKYVMDQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  360  LEIIKSKKVLKQLVEKVNEKSQIDVSSLNHDIAYKQSQCEEIKAKMHTLTKTIEDSPDLD  419
             EI+KS  V++Q+VE+VN+ +Q+DV++LNHDIAYKQ Q +E++AK+  L +TI+D+PDL 
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  420  SVLKPTILSYQDELNQINNQIYQLEQDKQAEAPHYDADMIANVLQAIFKDIDKLEKSQLK  479
            S +KPTI  Y+ +LN+I NQ+ QL ++++ E P YD+  IA +LQ IF++I  ++K+QLK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  480  SLYLTIIDRIDIRKDEHHKKQFYVTLKLNNDIIKQLFNNHPLDEVLPSTSSLFLPQTLYI  539
            +LYLT+IDRIDIRKD +HKKQFYVTLKLNN+IIKQLFNN +LDEVL STSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  540  TI  541
             I
Sbjct  541  QI  542

30) SE0056 in NC_004461


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  717 bits (2711),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/542 (74%), Positives = 491/542 (91%), Gaps = 1/542 (0%)

Query  1    MKQLKKKRIGLYARVSTEMQ-TDGYSIQGQLNQLTEYCQFQGYEVVNEYTDRGISGKTMQ  59
            M+QLK+KR+G+Y RVSTEMQ T+GYSI+GQ+NQ+ EYC+F+ + VV+ Y+DRGISGK+M+
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN  60

Query  60   RPELQRMLKDANEGKLDCIMVYKTNRLARNTSDLLNIVEELYKINVEFFSLTEKIEIASS  119
            RPELQR+LKDANEG++DC+MVYKTNRLARNTSDLL+IVE+L + NVEFFSL+E++E+ +S
Sbjct  61   RPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTS  120

Query  120  TGKLMLQILASFAEFERNTIVENVYNGQRQRAIEGYYQGNLPLGYDKVPDSKKELMINQH  179
            +GKLMLQILASF+EFERN IVENV+ GQ +RA EGYYQGNLPLGYDK+PDSK ELMINQH
Sbjct  121  SGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQH  180

Query  180  EANIVKYIFDSYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYIISNPFYIGKIQFAK  239
            EANIVKYIF+SYAKGHGYRKIANALNHKGY+TKKGKPFSISSITYI+SNPFYIGKIQFAK
Sbjct  181  EANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAK  240

Query  240  YRHWSDKRRKGLNEEPIIADGKHAPIIDRNLWDKVQFKRQESRKKPQVHGKGTNLLTGIV  299
            Y++W++KRRKGLN+ PIIADGKH+PII ++LWDKVQ ++Q+  +KPQVHGKGTNLLTGIV
Sbjct  241  YKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIV  300

Query  300  KCPKCGAAMEASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVLEKYVMDQI  359
             CP+CGA+M ASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANS+RADV+EKYVMDQI
Sbjct  301  HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQI  360

Query  360  LEIIKSKKVLKQLVEKVNEKSQIDVSSLNHDIAYKQSQCEEIKAKMHTLTKTIEDSPDLD  419
             EI+KS  V++Q+VE+VN+ +Q+DV++LNHDIAYKQ Q +E++AK+  L +TI+D+PDL 
Sbjct  361  REIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDLT  420

Query  420  SVLKPTILSYQDELNQINNQIYQLEQDKQAEAPHYDADMIANVLQAIFKDIDKLEKSQLK  479
            S +KPTI  Y+ +LN+I NQ+ QL ++++ E P YD+  IA +LQ IF++I  ++K+QLK
Sbjct  421  SAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQLK  480

Query  480  SLYLTIIDRIDIRKDEHHKKQFYVTLKLNNDIIKQLFNNHPLDEVLPSTSSLFLPQTLYI  539
            +LYLT+IDRIDIRKD +HKKQFYVTLKLNN+IIKQLFNN +LDEVL STSSLFLPQTLY+
Sbjct  481  ALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQLFNNTALDEVLLSTSSLFLPQTLYF  540

Query  540  TI  541
             I
Sbjct  541  QI  542

31) Lp16_0045 in NC_021514


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  341 bits (1282),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 210/517 (41%), Positives = 358/517 (70%), Gaps = 8/517 (1%)

Query  10   KAKRAVGYVRVSTAEQADEGFSVAAQGELIRQECTRYGNEMQFVKLYADEGISGKSIKRR  69
            K KR   YVRVST  Q+ EG+S+ +Q + IR+ C    N+   V +YAD GISGKS++R 
Sbjct  5    KQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCN--FNNFAVVDVYADRGISGKSMNR-  61

Query  70   PQMQQLLADVQAGEIDAVICWNISRIARNVANLLEIVDIFERNDVSFISINEKMDTQTPA  129
            P++Q+LL D + G+ID V+  + +R+ARN ++LL IV+ ++R++V F+S++E+M+ +T++
Sbjct  62   PELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTSS  121

Query  130  GRLMLQIMASMGEYERNNIAENVYMGSRRRAVEGWNNSGLVLGYDNVVDEDGNHTLQINP  189
            G+LMLQI+AS +E+ERNNI ENV+MG  RRA EG  ++ L LGYD++   D++H L IN 
Sbjct  122  GKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKI--PDSKHELMINQ  179

Query  190  DEAKIIRHIFDLAALGKGLRAIANELNQTGNRTKRGNAFSTTAVKAILTNPLYVGKVRYG  249
            +EA+I++ IF+  A G G R IAN LN+ G  TK+G++FS +++  IL+NP+Y+GK++++
Sbjct  180  HEANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFA  239

Query  250  QYRHWDKKRRHGKQADYVLVDGQHPAIIEPQQWSRVVSLMKQRHKLPAWTRQGSNVLTGL  309
            +Y++W+ KRR G +   ++ DG+H++II  + W +V +  +Q  + P    +G+N+LTG+
Sbjct  240  KYKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGI  299

Query  310  LRCPECGGPMAAANTTNRLANGTRKRIRYYSCANFRNKGAAVCHANSIRaeeaeqlvqek  369
            ++CP+CG+PMAA+NTTN L +GT+KRIRYYSC+NFRNKG+ VC ANSIRA+  E+ V ++
Sbjct  300  VHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQ  359

Query  370  llqvlGMPKIGQQVIKQMKDSRQERCQSLKRQQCTNQAEQTRLEENIQEYERLMTDNHEL  429
            + +++    + QQV+ ++++  Q    +L+++   +Q +   ++ +I++  + + DN +L
Sbjct  360  IREIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPDL  419

Query  430  QAAIRPRMEALENQLDQLHADSQQVAKQLAQVDQLPKPKSIDSLLALVVKLIKSAEKDTL  489
             +AI+P ++  E QL+++  + +Q+  Q  Q      +K I  LL  + + I S +K  L
Sbjct  420  TSAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMDKTQL  479

Query  490  KQLYQAFIRQITFNR---QQKLVWITVAFDDDVIQQL  523
            K LY + I +I + +   ++K   +T+ +++++I+QL
Sbjct  480  KALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQL  516

32) ccrB in NC_017960


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  307 bits (1151),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 218/527 (42%), Positives = 360/527 (69%), Gaps = 20/527 (3%)

Query  1    METTPTKRVALYIRVSTQEQALEGHSIQAQEQNGRQFAERMGYEVVEVYADEGISGKSTK  60
            M+    KRV++Y+RVST+ Q+ EG SI++Q ++ R++ +   + VV+VYAD GISGKS  
Sbjct  1    MQQLKQKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKS-M  59

Query  61   NRFAYQRMMNDARNHRFDLLVIWKLTRLGRNMLDVLQTVEELLRYDVGLHSISEQFDVTT  120
            NR   QR+++DA + ++D +++ K  RL+RN  D+L+ VE+L R +V + S+SE+ +V T
Sbjct  60   NRPELQRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNT  119

Query  121  STGKLMLQLLGSFGEFERNQIAENVQMSMQSLVKDKKRYAGGRRLGYVSGIDTNGQKQLV  180
            S+GKLMLQ+L+SF+EFERN+I ENV M+ Q+   +   Y G   LGY  +   +++ +L+
Sbjct  120  SSGKLMLQILASFSEFERNNIVENVFMG-QTRRAQEGYYQGNLPLGY--DKIPDSKHELM  176

Query  181  IEPEEAKIVRLIYAKYLGGAGYRAIANFLNRQGYQTVKKNAFSTTAVKDILRNKIYAGYL  240
            I+ +EA+IV+ I+  Y  G GYR IAN LN++GY T K ++FS +++  IL N +Y G +
Sbjct  177  INQHEANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKI  236

Query  241  EYARYINWETKRRKGKNPKPILVKGTHEPIISEEDYQKVQERLALEGKQPKWNHTGENVL  300
            ++A+Y +W+ KRRKG N KPI+  G H PIIS++  +KVQ R    +++P+ +  G N+L
Sbjct  237  QFAKYKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLL  296

Query  301  TGLLRCPECGAPMAASNVTNTLKDGTKKRIRYYSCSVFRNKGASVCHANSIRAEQAETFV  360
            TG+++CP+CGAPMAASN TNTLKDGTKKRIRYYSCS FRNKG+ VC ANSIRA+  E +V
Sbjct  297  TGIVHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYV  356

Query  361  ADRLKEIVQLPEVLSRLVAALNEEIVRQSQPleqelvvllerkeelktkiekWEAALEDS  420
             D+++EIV+   V+ ++V  +N+E   +  +L++++    ++ +E+++KI +   +++D+
Sbjct  357  MDQIREIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDN  416

Query  421  PELFPMLK-------DRLDELTEKRRQLHIRENEILGIFQQQGEPIQVKDVQRILTSLDR  473
            P+L + +K        +L+++T++  QL  ++N       Q+  + + K++  +L  + +
Sbjct  417  PDLTSAIKPTIHQYEAQLNDITNQMNQLKHQQN-------QEKPSYDSKQIAVLLQRIFQ  469

Query  474  FLTQSEKKQVKALYRTFIEKITF--DPKQKEILEITMKFTPAVVQQL  518
             +T  +K Q+KALY T I++I +  D  +K  + +T+K+   +++QL
Sbjct  470  NITSMDKTQLKALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQL  516

33) BACI_c54540 in NC_014335


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  306 bits (1146),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 202/477 (43%), Positives = 322/477 (68%), Gaps = 12/477 (2%)

Query  3    QVVIYARVSTAEQAEEGYSIDAQLDVVKKRCEQEGRIVVDNYVDRGISGKAMGNRAELQR  62
            +V IY RVST  Q+ EGYSID+Q++ ++  C+ +   VVD Y DRGISGK+M NR+ELQR
Sbjct  8    RVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSM-NRPELQR  66

Query  63   LLRDAGENKFQEIWVWKTNRLARNHLDLLKIVDELNKNNVGFKSCSEAFDTATPTGKLLM  122
            LL+DA E +++ + V KTNRLARN  DLLKIV++L+++NV F S SE  +  T++GKL++
Sbjct  67   LLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTSSGKLML  126

Query  123  NVLASIGEFERESIVENVKMGMKQRAREGKWNGGIVLGYNTVKIDKTENKTKLEVEEKEA  182
            ++LAS++EFER++IVENV MG  +RA+EG  +G + LGY+ +     ++K  L +++ EA
Sbjct  127  QILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKI----PDSKHELMINQHEA  182

Query  183  YIVKEIFKLYAEGRGLKAITNLVNKLGYRTKRGNFFTPIAIRTILLNPIYIGKIRYNVRE  242
             IVK IF  YA G+G + I+N +N  GY TK+G+ F+  +I  IL NP+YIGKI++    
Sbjct  183  NIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAKYK  242

Query  243  NWSEKRRKGINENPIYTNGNHDPIISLDLWNRVQELYKKKSQKPKRLFDGTFPLTGLIKC  302
            +W+EKRRKG+N++PI ++G+H PIIS DLW++VQ   ++ SQKP+    GT  LTG++ C
Sbjct  243  DWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIVHC  302

Query  303  PMCGASMVAGRVKRKLKDGNINIIRYYQCGAWRNKGTAACRSNGVRADKIEKQVFKRINQ  362
            P CGA+M A+     LKDG  + IRYY C+  RNKG+  C +N++RAD IEK V  +I +
Sbjct  303  PQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQIRE  362

Query  363  IVLNDKILKDTVSKLNDNTHNKIKPLEEALNITNKKIQNFEKKKSRIFDLYEEGTIAKEV  422
            IV +D ++++ V ++N++ +  + +L++ +     K Q+F+  +++I +L  +    +  
Sbjct  363  IVKSDTVIQQVVERVNQENQVDVAALNHDIAY---KQQQFDEVNAKIKNL-VQTIDDNPD  418

Query  423  LTSRLEHISNEIQMNFVQKISIEKELKQNTSNPIPVDTVKK---LLIRFHHLIGIME  476
            LTS +    ++ + ++ +  +  ++LK++ ++  P    K+   LL R+ + I  M+
Sbjct  419  LTSAIKPTIHQYEAQLNDITNQMNQLKHQQNQEKPSYDSKQIAVLLQRIFQNITSMD  475

34) BATR1942_18125 in NC_014639


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  301 bits (1126),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 179/394 (46%), Positives = 272/394 (70%), Gaps = 8/394 (2%)

Query  21   QKRAAIYARVSTLEQAEEGYSIDEQVRVLREMCEREGYVVHKEYVDRGKSGKNIKGRPAL  80
            QKR +IY RVST  Q+ EGYSID Q+  +RE C+ + + V   Y DRG SGK+++ RP L
Sbjct  6    QKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN-RPEL  64

Query  81   QQLLHDAKGKDFNLVLVWKVNRFSRKTKDLLNIVEELEMRNIVFRSFTERYETETPAGKM  140
            Q+LL DA+  +++ V+V K NR++R+T DLL+IVE+L+ +N+ F S++ER E +T++GK+
Sbjct  65   QRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTSSGKL  124

Query  141  QFRMLAVIAEFERDNIAQNVKMGMLARAKEGSWNGGQVLGYDVISVPGENRKRKLSTLVV  200
             +++LA ++EFER+NI +NV MG   RA+EG  +G   LGYD   +P+ ++      L++
Sbjct  125  MLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYD--KIPDSKH-----ELMI  177

Query  201  NPTEAQTVRKVFDLYVEGNGYKSIANKLNKEGHRTKKNKDFSINGVKTILSNPLYAGFIR  260
            N  EA+ V+ +F+ Y  G+GY+ IAN LN  G  TKK K FSI+++  ILSNP+Y G I+
Sbjct  178  NQHEANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQ  237

Query  261  YNVRRDWNEKRRNNINPHPVIEKGHHEAIISEETWEKAKNIMASRSGKPNRIHDGEFPLT  320
            +   +DWNEKRR+ +N  P+I  G H +IIS++ W+K +      S KP+    G   LT
Sbjct  238  FAKYKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLT  297

Query  321  GIMKCPACGAGMVIGRTTNTLKDGTKKVLEYYVCGAWKNKGTAVCRSNGVRTDYADPYVL  380
            GI+ CP CGA M  + TTNTLKDGTKK + YY C+  +NKG+ VC +N++R+D  + YV+
Sbjct  298  GIVHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVM  357

Query  381  EKLSTIATSDVLIEQIVERINNKKERDSSPLQHE  414
            +++  I  SD +I+Q+VER+N+ ++ D ++L+H+
Sbjct  358  DQIREIVKSDTVIQQVVERVNQENQVDVAALNHD  391

35) BCG9842_B5360 in NC_011772


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  301 bits (1129),  Expect = 7e-83, Method: Compositional matrix adjust.
 Identities = 211/522 (41%), Positives = 347/522 (67%), Gaps = 17/522 (3%)

Query  8    KTVAIYARVSTIEQAEEGYSIDEQLRVLNEFCKSEGYLVYDEYVDRGISGKNISGRPAVQ  67
            K V+IY RVST  Q+ EGYSID Q+  + E+C+ + + V D Y DRGISGK+++ RP +Q
Sbjct  7    KRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN-RPELQ  65

Query  68   RMLNDAEQKKFEVVLVWKMNRLARKSLDLMNIVEKLNSKNIAFRSYTEKYETETPPGKLQ  127
            R+L+DA++ +++ V+V K NRLAR++ DL++IVE L+ +N+ F S +E+ E +T++GKL 
Sbjct  66   RLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTSSGKLM  125

Query  128  FQLMAAIAEYERNNIAENVKMGMIARAKEGRWNGGQVLGYDVVEISSDNRKRKDTHLVIN  187
            +Q++A+++E+ERNNI ENV MG   RA+EG  +G   LGYD +  S ++       L+IN
Sbjct  126  LQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHE-------LMIN  178

Query  188  EREANTVQLIFQMYGSGHGYKSIANCINKKGYRTKKGKTFSLNAIKIIVTNPVYAGYIRY  247
            ++EAN V+ IF+ Y+ GHGY+ IAN +N KGY TKKGK FS+++I  I++NP Y G I++
Sbjct  179  QHEANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQF  238

Query  248  NVRKDWNEKRRnninpnpiiQKGEHEPIISEEVWQVAQNVYQSRSCKPNRIHDGEFPLTG  307
               KDWNEKRR+ +N +PII  G H PIIS+++W+  Q   Q  S KP+    G   LTG
Sbjct  239  AKYKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTG  298

Query  308  IMRCPACGAGMVISPTTNTLKDGTKRVLEYYVCGSWKNKGTLVCRSNGVRTEYADAFTLD  367
            I++CP CGA M  S TTNTLKDGTK+ + YY C++ +NKG+ VC +N++R++  + + +D
Sbjct  299  IVHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMD  358

Query  368  KLQRLMHSDKLIKELVKSVNSRNGKKFAPLQKEFEMYAKQMNEAEQKLSKTFDAYTDELI  427
            +++ ++ SD +I+++V  VN  N    A+L+ ++    +Q +E + K+ +  ++  D+  
Sbjct  359  QIREIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTIDDNPD  418

Query  428  SKAMYVEKAKRLEGQIQELKELMEPLRKQIQGNTVKVVSYEMIKEVLLNFSKAFQN--AL  485
              +       + E+Q++++ + M+ L+ Q + +     SY+  K++ + + + FQN  ++
Sbjct  419  LTSAIKPTIHQYEAQLNDITNQMNQLKHQQNQEK---PSYD-SKQIAVLLQRIFQNITSM  474

Query  486  TREQRKRLLHLLIHKITI---NEDRKIESIQLKFNNEVLKEL  524
             + Q K L   +I++I I    +++K   + LK+NNE++K+L
Sbjct  475  DKTQLKALYLTVIDRIDIRKDGDHKKQFYVTLKLNNEIIKQL  516

36) Bsph_4747 in NC_010382


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  293 bits (1097),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 205/505 (41%), Positives = 344/505 (69%), Gaps = 20/505 (3%)

Query  14   RRRIAIYARVSTTEQAEEGYSIDEQIRVLKEYCEDNGYFVFEEYIDRGISGKNITGRPAV  73
            ++R++IY RVST  Q+ EGYSID QI  ++EYC+ N + V + Y DRGISGK++  RP +
Sbjct  6    QKRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSM-NRPEL  64

Query  74   QRMLQDAEQKKLDVVLVWKMNRLARKMVDLMNIVELLNSKNIAFRSHTERYETETPTGKL  133
            QR+L+DA++ ++D V+V K NRLAR+  DL++IVE L+ +N+ F S +ER E +T++GKL
Sbjct  65   QRLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTSSGKL  124

Query  134  QFQMMAAIAEYERNNIAENVKMGMIARAKEGKWNGGQVLGYDIVQIPDANKKRKNTQLVI  193
             +Q++A+++E+ERNNI ENV MG   RA+EG  +G   LGYD  +IPD++      +L+I
Sbjct  125  MLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYD--KIPDSKH-----ELMI  177

Query  194  NEKEAEIVQYIFNMYTSGHGYKAIANHINkkgfltkkgktfSLNAIKTIVTNPVYTGYIR  253
            N+ EA+IV+YIF+ Y+ GHGY+ IAN +N KG++TKKGK FS+++I  I++NP Y G I+
Sbjct  178  NQHEANIVKYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQ  237

Query  254  YNVRRDWNEKRRNNINPDPVIQKADHSPIITEEMWSIAKGIFERRSGLPNR--VHD-GEF  310
            +   +DWNEKRR+ +N  P+I  + HSPII++++W   ++   R+  ++++  VH+ G  
Sbjct  238  FAKYKDWNEKRRKGLNDKPIIADGKHSPIISQDLWDKVQA---RKQQVSQKPQVHGKGTN  294

Query  311  PLTGIMRCPICDAGMVIGRTTNTLKDGTKKVLEYYVCGAWKNKGTLVCRSNGVRTDKADA  370
             LTGI++CP C+A M  + TTNTLKDGTKK + YY C+  +NKG+ VC +N++R+D  + 
Sbjct  295  LLTGIVHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEK  354

Query  371  YVFSKLQTLMQSDKLIQELVNNVNQRNEKLFAPIQKEHAFYQKQMQELEHKRGKTFDAYT  430
            YV  +++ +++SD +IQ++V+ VNQ N+   A+++ + A+ Q+Q +E++ K  +  ++  
Sbjct  355  YVMDQIREIVKSDTVIQQVVERVNQENQVDVAALNHDIAYKQQQFDEVNAKIKNLVQTID  414

Query  431  EELIPKSLYIEKANALDKQIAELNERMKPLNRQMQGNSGETIAPEAIRKILKDFSKAFEQ  490
            ++    S      +  + Q+ ++ ++M+ L++Q Q +   +  +  I  +L+   + F++
Sbjct  415  DNPDLTSAIKPTIHQYEAQLNDITNQMNQLKHQ-QNQEKPSYDSKQIAVLLQ---RIFQN  470

Query  491  --ALTREQRKRLLHLIINKITINED  513
              ++ + Q K L   +I++I I  D
Sbjct  471  ITSMDKTQLKALYLTVIDRIDIRKD  495

37) spoIVCA in NC_006270


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  243 bits (905),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 163/385 (43%), Positives = 265/385 (69%), Gaps = 8/385 (2%)

Query  5    KRVAIYCRVSTEEQATEGYSISAqlqtlrqytqlyGWEIAEEYVDEGISGKNISGRPAMQ  64
            KRV+IY RVSTE Q+TEGYSI +Q++ +R+Y ++    + + Y D GISGK+++ RP +Q
Sbjct  7    KRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN-RPELQ  65

Query  65   KLISDVEKDKFQAVLVWKISRLSRNMLDTLTLLDKFEDYGVKFISYSENFDTGSPIGRLV  124
            +L+ D + ++++ V+V K +RL+RN  D L +++ ++   V F+S SE  +  ++ G+L+
Sbjct  66   RLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTSSGKLM  125

Query  125  VQLMASIAEMERNTLSENVKLGMKQRALEGSWNGGVVFGYDTIE---KELVINKKEAEIV  181
            +Q++AS++E ERN + ENV +G  +RA EG  +G + +GYD I     EL+IN+ EA+IV
Sbjct  126  LQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQHEANIV  185

Query  182  QQIYQLYANGKGLKSIANYLNKAGYRTKRNCYFSINGVAQILDNVIYNGKISWLKVENWD  241
            + I++ YA+G G + IAN LN  GY TK+   FSI++++ IL N +Y GKI   K  +W+
Sbjct  186  KYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAKYKDWN  245

Query  242  TKRRRGKNPNPILVEGQHEAIISDELWSMVQARRKSKSFKQR-QSNEPFLLSSLLRCPDC  300
             KRR+G N +PI+ +G+H +IIS++LW  VQAR++  S K + +++   LL+++++CP+C
Sbjct  246  EKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIVHCPQC  305

Query  301  GQGMVPAITTNKRKDGTKKKYRYYVCSNFHNKGSSACRANSIKAYDAEYEVINKIEKILS  360
            G  M ++ TTN  KDGTKK+ RYY CSNF+NKGS  C ANSI+A   E  V+++I  I+ 
Sbjct  306  GAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQIREIVK  365

Query  361  NQ---NQLFSKLQSINTTSIESLNQ  382
            ++   +Q+  +++  N   + +LN+
Sbjct  366  SDTVIQQVVERVNQENQVDVAALNH  390

38) BLi04323 in NC_006322


> NC_017349_R1|14|G12|387779253|YP_005754051.1|Staphylococcus_aureus_subsp._aureus_LGA251|-|9828..11456|ccrB3|SARLGA251_00360|site-specific 
recombinase CcrB3
Length=542

 Score =  243 bits (905),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 163/385 (43%), Positives = 265/385 (69%), Gaps = 8/385 (2%)

Query  5    KRVAIYCRVSTEEQATEGYSISAqlqtlrqytqlyGWEIAEEYVDEGISGKNISGRPAMQ  64
            KRV+IY RVSTE Q+TEGYSI +Q++ +R+Y ++    + + Y D GISGK+++ RP +Q
Sbjct  7    KRVGIYVRVSTEMQSTEGYSIDGQINQIREYCNFNNFAVVDVYADRGISGKSMN-RPELQ  65

Query  65   KLISDVEKDKFQAVLVWKISRLSRNMLDTLTLLDKFEDYGVKFISYSENFDTGSPIGRLV  124
            +L+ D + ++++ V+V K +RL+RN  D L +++ ++   V F+S SE  +  ++ G+L+
Sbjct  66   RLLKDANEGQIDCVMVYKTNRLARNTSDLLKIVEDLHRQNVEFFSLSERMEVNTSSGKLM  125

Query  125  VQLMASIAEMERNTLSENVKLGMKQRALEGSWNGGVVFGYDTIE---KELVINKKEAEIV  181
            +Q++AS++E ERN + ENV +G  +RA EG  +G + +GYD I     EL+IN+ EA+IV
Sbjct  126  LQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLGYDKIPDSKHELMINQHEANIV  185

Query  182  QQIYQLYANGKGLKSIANYLNKAGYRTKRNCYFSINGVAQILDNVIYNGKISWLKVENWD  241
            + I++ YA+G G + IAN LN  GY TK+   FSI++++ IL N +Y GKI   K  +W+
Sbjct  186  KYIFESYAKGHGYRKIANALNHKGYITKKGKPFSISSITYILSNPFYIGKIQFAKYKDWN  245

Query  242  TKRRRGKNPNPILVEGQHEAIISDELWSMVQARRKSKSFKQR-QSNEPFLLSSLLRCPDC  300
             KRR+G N +PI+ +G+H +IIS++LW  VQAR++  S K + +++   LL+++++CP+C
Sbjct  246  EKRRKGLNDKPIIADGKHSPIISQDLWDKVQARKQQVSQKPQVHGKGTNLLTGIVHCPQC  305

Query  301  GQGMVPAITTNKRKDGTKKKYRYYVCSNFHNKGSSACRANSIKAYDAEYEVINKIEKILS  360
            G  M ++ TTN  KDGTKK+ RYY CSNF+NKGS  C ANSI+A   E  V+++I  I+ 
Sbjct  306  GAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSIRADVIEKYVMDQIREIVK  365

Query  361  NQ---NQLFSKLQSINTTSIESLNQ  382
            ++   +Q+  +++  N   + +LN+
Sbjct  366  SDTVIQQVVERVNQENQVDVAALNH  390