Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
T3SS structural protein EscU |
NC_013716 (Citrobacter rodentium ICC168) |
2e-151 |
92 |
|
T3SS structure protein EscU |
NC_013364 (Escherichia coli 11128) |
1e-148 |
98 |
|
secretion system apparatus protein SsaU |
NC_011601 (Escherichia coli E2348/69) |
1e-148 |
98 |
|
secretion system apparatus protein SsaU |
NC_013941 (Escherichia coli CB9615) |
2e-148 |
98 |
|
secretion system apparatus protein SsaU |
NC_011353 (Escherichia coli EC4115) |
2e-148 |
98 |
|
secretion system apparatus protein SsaU |
NC_002655 (Escherichia coli EDL933) |
2e-148 |
98 |
|
secretion system apparatus protein SsaU |
NC_017656 (Escherichia coli RM12579) |
2e-148 |
98 |
|
secretion system apparatus protein SsaU |
NC_002695 (Escherichia coli Sakai) |
2e-148 |
98 |
|
secretion system apparatus protein SsaU |
NC_013008 (Escherichia coli TW14359) |
2e-148 |
98 |
|
secretion system apparatus protein SsaU |
NC_017906 (Escherichia coli Xuzhou21) |
2e-148 |
98 |
|
secretion system apparatus protein SsaU |
NC_013361 (Escherichia coli 11368) |
5e-144 |
100 |
|
T3SS structure protein EscU |
NC_013353 (Escherichia coli 12009) |
1e-143 |
99 |
|
secretion system apparatus protein SsaU |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
4e-70 |
42 |
|
type III secretion protein, YscU/HrpY family |
NC_017571 (Shewanella baltica BA175) |
5e-68 |
42 |
|
secretion system apparatus protein SsaU |
NC_009997 (Shewanella baltica OS195) |
6e-68 |
42 |
|
type III secretion protein, YscU/HrpY family |
NC_016901 (Shewanella baltica OS678) |
6e-68 |
42 |
|
type III secretion system EscU protein |
NC_014012 (Shewanella violacea DSS12) |
7e-68 |
42 |
|
type III secretion protein, YscU/HrpY family |
NC_017579 (Shewanella baltica OS117) |
9e-68 |
42 |
|
secretion system apparatus protein SsaU |
NC_009052 (Shewanella baltica OS155) |
9e-68 |
42 |
|
type III secretion protein, YscU/HrpY family |
NC_015224 (Yersinia enterocolitica 105.5R(r)) |
8e-65 |
41 |
|
type III secretion inner membrane protein |
NC_017564 (Yersinia enterocolitica Y11) |
8e-65 |
41 |
|
secretion system apparatus protein SsaU |
NC_006155 (Yersinia pseudotuberculosis IP 32953) |
6e-63 |
42 |
|
secretion system apparatus protein SsaU |
NC_010634 (Yersinia pseudotuberculosis PB1/+) |
6e-63 |
42 |
|
secretion system apparatus protein SsaU |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
7e-63 |
42 |
|
secretion system apparatus protein SsaU |
NC_010465 (Yersinia pseudotuberculosis YPIII) |
7e-63 |
42 |
|
secretion system apparatus protein SsaU |
NC_005810 (Yersinia pestis 91001) |
3e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_017168 (Yersinia pestis A1122) |
3e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_010159 (Yersinia pestis Angola) |
3e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_008150 (Yersinia pestis Antiqua) |
3e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_003143 (Yersinia pestis CO92) |
3e-62 |
42 |
|
putative type III secretion apparatus protein |
NC_017160 (Yersinia pestis D182038) |
3e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_004088 (Yersinia pestis KIM) |
3e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_008149 (Yersinia pestis Nepal516) |
3e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_009381 (Yersinia pestis Pestoides F) |
3e-62 |
42 |
|
putative type III secretion apparatus protein |
NC_014029 (Yersinia pestis Z176003) |
3e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_011274 (Salmonella enterica 287/91) |
2e-50 |
41 |
|
putative type III secretion protein |
NC_022221 (Salmonella enterica CDC1983-67) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_011294 (Salmonella enterica P125109) |
2e-50 |
41 |
|
putative type III secretion protein |
NC_016831 (Salmonella enterica RKS5078) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_021984 (Salmonella enterica S06004) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_021820 (Salmonella enterica 08-1736) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_016856 (Salmonella enterica 14028S) |
2e-50 |
41 |
|
type III secretion protein |
NC_017046 (Salmonella enterica 798) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_021844 (Salmonella enterica CFSAN000189) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_021814 (Salmonella enterica CFSAN001921) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_021818 (Salmonella enterica CFSAN002050) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_003197 (Salmonella enterica LT2) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
2e-50 |
41 |
|
putative type III secretion protein |
NC_016810 (Salmonella enterica SL1344) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_016857 (Salmonella enterica ST4/74) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_016860 (Salmonella enterica T000240) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_021151 (Salmonella enterica U288) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_016863 (Salmonella enterica UK-1) |
2e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_021810 (Salmonella enterica 41578) |
3e-50 |
41 |
|
Type III secretion inner membrane protein |
NC_017623 (Salmonella enterica B182) |
3e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_021812 (Salmonella enterica CFSAN002069) |
3e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_011205 (Salmonella enterica CT_02021853) |
3e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_012125 (Salmonella enterica RKS4594) |
3e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_011080 (Salmonella enterica SL254) |
3e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_011083 (Salmonella enterica SL476) |
3e-50 |
41 |
|
Secretion system apparatus protein ssaU |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
3e-50 |
41 |
|
putative type III secretion protein |
NC_022241 (Salmonella enterica 3114) |
4e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_011147 (Salmonella enterica AKU12601) |
4e-50 |
41 |
|
type III secretion protein |
NC_006511 (Salmonella enterica ATCC 9150) |
4e-50 |
41 |
|
putative type III secretion protein |
NC_003198 (Salmonella enterica CT18) |
4e-50 |
41 |
|
Secretion system apparatus protein ssaU |
NC_016832 (Salmonella enterica P-stx-12) |
4e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_011149 (Salmonella enterica SL483) |
4e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_004631 (Salmonella enterica Ty2) |
4e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_021176 (Salmonella enterica Ty21a) |
4e-50 |
41 |
|
putative type III secretion protein |
NC_016854 (Salmonella enterica D23580) |
1e-49 |
41 |
|
type III secretion protein, YscU/HrpY family |
NC_012779 (Edwardsiella ictaluri 93-146) |
4e-48 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_013361_P1' AND ph.id_pai_orf='14' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc