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Homologs of papD gene of NC_008563_P4

318

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECP_4538
( YP_672375.1 )

chaperone protein PapD

NC_008253
(Escherichia coli 536)

3e-112

100

2) papD
( YP_006108761.1 )

periplasmid chaperone PapD protein

NC_017631
(Escherichia coli ABU 83972)

3e-112

100

3) papD
( YP_854253.1 )

pilus assembly protein chaperone PapD

NC_008563
(Escherichia coli APEC O1)

3e-112

100

4) papD
( YP_002392881.1 )

Chaperone protein PapD precursor

NC_011742
(Escherichia coli S88)

3e-112

100

5) UM146_21670
( YP_006113174.1 )

Chaperone protein PapD precursor

NC_017632
(Escherichia coli UM146)

3e-112

100

6) papD_2
( NP_757033.1 )

PapD protein

NC_004431
(Escherichia coli CFT073)

5e-112

7) papD
( YP_002410454.1 )

Chaperone protein PapD

NC_011750
(Escherichia coli IAI39)

5e-112

8) papD
( YP_006141785.1 )

PapD protein

NC_017644
(Escherichia coli NA114)

5e-112

9) papD
( YP_002414014.1 )

Chaperone protein PapD

NC_011751
(Escherichia coli UMN026)

5e-112

10) papD
( YP_543826.1 )

periplasmid chaperone PapD protein

NC_007946
(Escherichia coli UTI89)

1e-109

100

11) papD
( YP_006146819.1 )

Chaperone protein PapD

NC_017646
(Escherichia coli CE10)

2e-109

12) ECP_2969
( YP_670853.1 )

PixD protein

NC_008253
(Escherichia coli 536)

8e-94

13) papD
( NP_755464.1 )

PapD protein

NC_004431
(Escherichia coli CFT073)

1e-91

14) ETAC_10675
( YP_007629616.1 )

chaperone PapD

NC_020796
(Edwardsiella tarda C07-087)

9e-90

15) ETAE_2251
( YP_003296297.1 )

chaperone protein PapD

NC_013508
(Edwardsiella tarda EIB202)

8e-89

16) papD
( YP_005699635.1 )

chaperone PapD

NC_017309
(Edwardsiella tarda FL6-60)

8e-89

17) SMWW4_v1c06200
( YP_007404446.1 )

pili assembly chaperone

NC_020211
(Serratia marcescens WW4)

9e-79

18) BB2000_2353
( YP_008398878.1 )

fimbrial chaperone protein

NC_022000
(Proteus mirabilis BB2000)

1e-75

19) PMI2220
( YP_002151938.1 )

fimbrial chaperone protein

NC_010554
(Proteus mirabilis HI4320)

1e-75

20) YPTS_3499
( YP_001873909.1 )

Pili assembly chaperone, N-terminal

NC_010634
(Yersinia pseudotuberculosis PB1/+)

8e-75

21) papD
( YP_001399607.1 )

chaperone protein PapD

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-74

22) fimC6
( NP_994311.1 )

fimbrial chaperone protein

NC_005810
(Yersinia pestis 91001)

2e-74

23) A1122_01560
( YP_005520011.1 )

fimbrial chaperone protein

NC_017168
(Yersinia pestis A1122)

2e-74

24) papD
( YP_001604871.1 )

fimbrial chaperone protein

NC_010159
(Yersinia pestis Angola)

2e-74

25) YPA_3094
( YP_653001.1 )

fimbrial chaperone protein

NC_008150
(Yersinia pestis Antiqua)

2e-74

26) YPO0699
( YP_002345763.1 )

fimbrial chaperone protein

NC_003143
(Yersinia pestis CO92)

2e-74

27) YPD4_0609
( YP_005503821.1 )

fimbrial chaperone protein

NC_017154
(Yersinia pestis D106004)

2e-74

28) YPD8_0609
( YP_005507692.1 )

fimbrial chaperone protein

NC_017160
(Yersinia pestis D182038)

2e-74

29) YPC_3875
( YP_005625597.1 )

fimbrial chaperone protein

NC_017265
(Yersinia pestis Harbin 35)

2e-74

30) y3479
( NP_670776.1 )

fimbrial chaperone protein

NC_004088
(Yersinia pestis KIM)

2e-74

31) YPN_0556
( YP_646488.1 )

fimbrial chaperone protein

NC_008149
(Yersinia pestis Nepal516)

2e-74

32) YPDSF_0482
( YP_001161868.1 )

fimbrial chaperone protein

NC_009381
(Yersinia pestis Pestoides F)

2e-74

33) YPZ3_0655
( YP_003566827.1 )

fimbrial chaperone protein

NC_014029
(Yersinia pestis Z176003)

2e-74

34) YPTB3362
( YP_071852.1 )

fimbrial chaperone protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-74

35) YPK_0696
( YP_001719450.1 )

pili assembly chaperone

NC_010465
(Yersinia pseudotuberculosis YPIII)

2e-74

36) S70_12310
( YP_006217000.1 )

fimbrial chaperone protein

NC_017731
(Providencia stuartii MRSN 2154)

2e-65

37) S70_07575
( YP_006216075.1 )

Chaperone protein PapD precursor

NC_017731
(Providencia stuartii MRSN 2154)

4e-64

38) mrfD
( YP_003039565.1 )

hypothetical fimbrial chaperone yfcs

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

1e-62

39) PMI0300
( YP_002150079.1 )

fimbrial chaperone protein

NC_010554
(Proteus mirabilis HI4320)

2e-62

40) mrfD
( NP_928117.1 )

MrfD protein

NC_005126
(Photorhabdus luminescens TTO1)

3e-62

41) S70_16080
( YP_006217722.1 )

Pili assembly chaperone

NC_017731
(Providencia stuartii MRSN 2154)

1e-60

42) S70_08130
( YP_006216181.1 )

fimbrial chaperone protein

NC_017731
(Providencia stuartii MRSN 2154)

2e-60

43) yfcS1
( YP_008137398.1 )

putative fimbrial chaperone YfcS

NC_021591
(Serratia odorifera 4Rx13)

1e-59

44) PFLU1094
( YP_002870754.1 )

putative exported fimbrial chaperone

NC_012660
(Pseudomonas fluorescens SBW25)

7e-60

45) M621_05730
( YP_008157977.1 )

fimbrial protein StfD

NC_021659
(Serratia plymuthica S13)

9e-60

46) SerAS9_4768
( YP_004508123.1 )

Pili assembly chaperone

NC_015567
(Serratia plymuthica AS9)

1e-59

47) SerAS12_4769
( YP_004503171.1 )

Pili assembly chaperone

NC_015566
(Serratia sp. AS12)

1e-59

48) SerAS13_4769
( YP_006027585.1 )

Pili assembly chaperone

NC_017573
(Serratia sp. AS13)

1e-59

49) M621_06740
( YP_008158168.1 )

fimbrial protein StfD

NC_021659
(Serratia plymuthica S13)

1e-59

50) mrpD
( YP_008396993.1 )

fimbrial chaperone protein

NC_022000
(Proteus mirabilis BB2000)

1e-59

51) mrpD
( YP_002150046.1 )

fimbrial chaperone protein

NC_010554
(Proteus mirabilis HI4320)

1e-59

52) SMWW4_v1c46270
( YP_007408433.1 )

pili assembly chaperone

NC_020211
(Serratia marcescens WW4)

2e-59

53) Spro_4674
( YP_001480895.1 )

pili assembly chaperone

NC_009832
(Serratia proteamaculans 568)

6e-59

54) CSSP291_01040
( YP_007439097.1 )

fimbrial chaperone YfcS

NC_020260
(Cronobacter sakazakii Sp291)

7e-59

55) XBJ1_3536
( YP_003469418.1 )

chaperone

NC_013892
(Xenorhabdus bovienii SS-2004)

1e-58

56) mrxD
( YP_003713923.1 )

Periplasmic fimbrial chaperone , MrxD

NC_014228
(Xenorhabdus nematophila ATCC 19061)

1e-58

57) YE105_C0728
( YP_004296927.1 )

pili chaperone protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

2e-58

58) Y11_22641
( YP_006005763.1 )

periplasmic fimbrial chaperone

NC_017564
(Yersinia enterocolitica Y11)

2e-58

59) mrpD
( YP_008396983.1 )

fimbrial chaperone protein

NC_022000
(Proteus mirabilis BB2000)

9e-59

60) papD
( YP_008140621.1 )

chaperone protein PapD

NC_021591
(Serratia odorifera 4Rx13)

2e-58

61) mrfD
( YP_003611617.1 )

pili chaperone protein

NC_014121
(Enterobacter cloacae ATCC 13047)

2e-58

62) M621_24360
( YP_008161617.1 )

molecular chaperone

NC_021659
(Serratia plymuthica S13)

3e-58

63) PANA5342_3207
( YP_005196637.1 )

pili assembly chaperone protein

NC_016816
(Pantoea ananatis LMG 5342)

3e-58

64) M495_23555
( YP_008232607.1 )

molecular chaperone

NC_021741
(Serratia liquefaciens ATCC 27592)

3e-58

65) S70_13120
( YP_006217157.1 )

MrfD protein

NC_017731
(Providencia stuartii MRSN 2154)

3e-58

66) plu0415
( NP_927768.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

3e-58

67) mrfD
( YP_001005123.1 )

pili chaperone protein

NC_008800
(Yersinia enterocolitica 8081)

4e-58

68) mrfD
( YP_001906353.1 )

periplasmatic chaperonin (mannose-resistance fimbriae), MrfD protein

NC_010694
(Erwinia tasmaniensis Et1/99)

5e-58

69) Spro_4145
( YP_001480367.1 )

pili assembly chaperone

NC_009832
(Serratia proteamaculans 568)

6e-58

70) H045_02410
( YP_007396054.1 )

putative exported fimbrial chaperone

NC_020209
(Pseudomonas poae RE*1-1-14)

4e-57

71) S70_14365
( YP_006217395.1 )

periplasmic fimbrial chaperone

NC_017731
(Providencia stuartii MRSN 2154)

5e-57

72) papD
( YP_005934888.1 )

fimbrial chaperone protein PapD precursor

NC_017531
(Pantoea ananatis AJ13355)

1e-56

73) papD
( YP_003521018.1 )

PapD

NC_013956
(Pantoea ananatis LMG 20103)

1e-56

74) PAGR_g1302
( YP_005992048.1 )

fimbrial chaperone protein PapD

NC_017554
(Pantoea ananatis PA13)

1e-56

75) RORB6_22395
( YP_007876711.1 )

pili chaperone protein

NC_021066
(Raoultella ornithinolytica B6)

1e-56

76) PANA5342_1329
( YP_005194759.1 )

fimbrial chaperone protein

NC_016816
(Pantoea ananatis LMG 5342)

9e-57

77) yfcS
( YP_008140674.1 )

putative fimbrial chaperone YfcS

NC_021591
(Serratia odorifera 4Rx13)

2e-56

78) D782_0706
( YP_007338945.1 )

P pilus assembly protein, chaperone PapD

NC_020063
(Enterobacteriaceae bacterium FGI 57)

2e-56

79) Entas_0857
( YP_004827390.1 )

Pili assembly chaperone

NC_015968
(Enterobacter asburiae LF7a)

7e-56

80) W5S_1575
( YP_006282539.1 )

Chaperone protein PapD

NC_017845
(Pectobacterium sp. SCC3193)

8e-56

81) M495_06905
( YP_008229336.1 )

hypothetical protein

NC_021741
(Serratia liquefaciens ATCC 27592)

2e-55

82) fimD
( NP_872874.1 )

periplasmic fimbrial chaperone

NC_002940
(Haemophilus ducreyi 35000HP)

2e-55

83) S70_17485
( YP_006217998.1 )

pili chaperone protein

NC_017731
(Providencia stuartii MRSN 2154)

7e-55

84) Ent638_0404
( YP_001175143.1 )

pili assembly chaperone

NC_009436
(Enterobacter sp. 638)

7e-55

85) SerAS9_4816
( YP_004508170.1 )

Pili assembly chaperone

NC_015567
(Serratia plymuthica AS9)

8e-55

86) SerAS12_4817
( YP_004503218.1 )

Pili assembly chaperone

NC_015566
(Serratia sp. AS12)

8e-55

87) SerAS13_4817
( YP_006027632.1 )

Pili assembly chaperone

NC_017573
(Serratia sp. AS13)

8e-55

88) AHML_02170
( YP_008041566.1 )

periplasmic fimbrial chaperone

NC_021290
(Aeromonas hydrophila ML09-119)

9e-55

89) pmfD
( YP_008398522.1 )

fimbrial chaperone protein

NC_022000
(Proteus mirabilis BB2000)

5e-54

90) pmfD
( YP_002151606.1 )

fimbrial chaperone protein

NC_010554
(Proteus mirabilis HI4320)

5e-54

91) AHA_0522
( YP_855055.1 )

fimbrial chaperone protein

NC_008570
(Aeromonas hydrophila ATCC 7966)

5e-54

92) SMWW4_v1c01140
( YP_007403941.1 )

pili assembly chaperone

NC_020211
(Serratia marcescens WW4)

3e-53

93) MU9_3489
( YP_007506906.1 )

Periplasmic fimbrial chaperone StfD

NC_020418
(Morganella morganii KT)

4e-53

94) MU9_3500
( YP_007506917.1 )

Periplasmic fimbrial chaperone StfD

NC_020418
(Morganella morganii KT)

6e-53

95) D781_0071
( YP_007342657.1 )

P pilus assembly protein, chaperone PapD

NC_020064
(Serratia marcescens FGI94)

1e-52

96) mrfD4
( YP_007407611.1 )

fimbrial chaperone MrfD

NC_020211
(Serratia marcescens WW4)

1e-52

97) mrfD3
( YP_007405443.1 )

fimbrial chaperone MrfD

NC_020211
(Serratia marcescens WW4)

1e-52

98) S70_06645
( YP_006215891.1 )

pili assembly chaperone

NC_017731
(Providencia stuartii MRSN 2154)

2e-52

99) B565_0478
( YP_004391130.1 )

Fimbrial chaperone protein

NC_015424
(Aeromonas veronii B565)

2e-52

100) AHML_02680
( YP_008041668.1 )

fimbrial chaperone protein

NC_021290
(Aeromonas hydrophila ML09-119)

3e-52

101) SMWW4_v1c03260
( YP_007404152.1 )

pili assembly chaperone

NC_020211
(Serratia marcescens WW4)

7e-52

102) fimD
( YP_001143437.1 )

type I pilus chaperone protein FimD

NC_009348
(Aeromonas salmonicida A449)

1e-51

103) YPK_0053
( YP_001718820.1 )

pili assembly chaperone

NC_010465
(Yersinia pseudotuberculosis YPIII)

1e-51

104) fimC10
( NP_994687.1 )

fimbrial chaperone

NC_005810
(Yersinia pestis 91001)

1e-51

105) y4060
( NP_671353.1 )

chaperone

NC_004088
(Yersinia pestis KIM)

1e-51

106) A1122_05625
( YP_005520811.1 )

putative fimbrial chaperone

NC_017168
(Yersinia pestis A1122)

8e-52

107) YPA_4131
( YP_654037.1 )

putative fimbrial chaperone

NC_008150
(Yersinia pestis Antiqua)

8e-52

108) YPO4041
( YP_002348904.1 )

fimbrial chaperone

NC_003143
(Yersinia pestis CO92)

8e-52

109) YPD4_3555
( YP_005506762.1 )

putative fimbrial chaperone

NC_017154
(Yersinia pestis D106004)

8e-52

110) YPD8_3562
( YP_005510623.1 )

putative fimbrial chaperone

NC_017160
(Yersinia pestis D182038)

8e-52

111) YPN_3688
( YP_649615.1 )

fimbrial chaperone

NC_008149
(Yersinia pestis Nepal516)

8e-52

112) YPDSF_3783
( YP_001165101.1 )

fimbrial chaperone

NC_009381
(Yersinia pestis Pestoides F)

8e-52

113) YPTS_4111
( YP_001874514.1 )

Pili assembly chaperone, N-terminal

NC_010634
(Yersinia pseudotuberculosis PB1/+)

8e-52

114) mrfD
( YP_001906216.1 )

MrfD protein

NC_010694
(Erwinia tasmaniensis Et1/99)

2e-51

115) YpsIP31758_4105
( YP_001403049.1 )

pili assembly chaperone protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

2e-51

116) YPTB3894
( YP_072370.1 )

fimbrial chaperone

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-51

117) Spro_4722
( YP_001480943.1 )

pili assembly chaperone

NC_009832
(Serratia proteamaculans 568)

7e-51

118) Rahaq2_0414
( YP_005198492.1 )

P pilus assembly protein, chaperone PapD

NC_016818
(Rahnella aquatilis CIP 78.65)

2e-50

119) Q7S_01940
( YP_005400220.1 )

Pili assembly chaperone, N-terminal protein

NC_017047
(Rahnella aquatilis HX2)

2e-50

120) Rahaq_0388
( YP_004211145.1 )

Pili assembly chaperone, N-terminal protein

NC_015061
(Rahnella sp. Y9602)

2e-50

121) YE105_C3852
( YP_004300049.1 )

putative fimbrial chaperone

NC_015224
(Yersinia enterocolitica 105.5R(r))

2e-50

122) Y11_30571
( YP_006006556.1 )

putative fimbrial chaperone

NC_017564
(Yersinia enterocolitica Y11)

2e-50

123) yfcS
( YP_003212005.1 )

fimbrial chaperone YfcS

NC_013282
(Cronobacter turicensis z3032)

3e-50

124) YpAngola_A4164
( YP_001608437.1 )

pili assembly chaperone protein

NC_010159
(Yersinia pestis Angola)

3e-50

125) YPC_4554
( YP_005626225.1 )

putative fimbrial chaperone

NC_017265
(Yersinia pestis Harbin 35)

3e-50

126) YE4123A
( YP_001008260.1 )

putative fimbrial chaperone

NC_008800
(Yersinia enterocolitica 8081)

8e-50

127) mrfD
( YP_005933288.1 )

periplasmic chaperonin (mannose-resistance fimbriae), MrfD protein

NC_017531
(Pantoea ananatis AJ13355)

9e-50

128) D782_3983
( YP_007342065.1 )

P pilus assembly protein, chaperone PapD

NC_020063
(Enterobacteriaceae bacterium FGI 57)

3e-49

129) KOX_00965
( YP_005016177.1 )

fimbrial chaperone protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

5e-49

130) yfcS
( YP_002329980.1 )

chaperone

NC_011601
(Escherichia coli E2348/69)

7e-49

131) A225_4643
( YP_006500319.1 )

Pi-fimbriae chaperone protein

NC_018106
(Klebsiella oxytoca E718)

1e-48

132) EAE_02595
( YP_004590733.1 )

putative fimbrial chaperone protein

NC_015663
(Enterobacter aerogenes KCTC 2190)

1e-48

133) ECO111_3084
( YP_003235460.1 )

putative chaperone

NC_013364
(Escherichia coli 11128)

8e-49

134) ECO26_3324
( YP_003230271.1 )

chaperone

NC_013361
(Escherichia coli 11368)

8e-49

135) yfcS
( YP_002413385.1 )

putative periplasmic pilus exported chaperone

NC_011751
(Escherichia coli UMN026)

8e-49

136) EC042_2577
( YP_006096880.1 )

fimbrial chaperone protein

NC_017626
(Escherichia coli 042)

9e-49

137) pmfD
( YP_001908934.1 )

Chaperone protein PmfD

NC_010694
(Erwinia tasmaniensis Et1/99)

2e-48

138) ROD_34991
( YP_003366957.1 )

fimbrial chaperone protein

NC_013716
(Citrobacter rodentium ICC168)

2e-48

139) yfcS
( YP_002398708.1 )

putative periplasmic pilus exported chaperone

NC_011745
(Escherichia coli ED1a)

2e-48

140) yfcS
( YP_002382000.1 )

periplasmic pilus chaperone

NC_011740
(Escherichia fergusonii ATCC 35469)

2e-48

141) EcolC_1316
( YP_001724309.1 )

pili assembly chaperone

NC_010468
(Escherichia coli ATCC 8739)

3e-48

142) EcHS_A2488
( YP_001459143.1 )

periplasmic pilus chaperone family protein

NC_009800
(Escherichia coli HS)

3e-48

143) UMNK88_2889
( YP_006134617.1 )

hypothetical protein

NC_017641
(Escherichia coli UMNK88)

4e-48

144) yfcS
( YP_408766.1 )

chaperone

NC_007613
(Shigella boydii Sb227)

5e-48

145) CFSAN002050_07520
( YP_008259446.1 )

fimbrial chaperone protein StdC

NC_021818
(Salmonella enterica CFSAN002050)

1e-47

146) ECA0941
( YP_049050.1 )

fimbrial chaperone

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-47

147) SPAB_00254
( YP_001586529.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

6e-48

148) S70_12850
( YP_006217104.1 )

pili assembly chaperone

NC_017731
(Providencia stuartii MRSN 2154)

6e-48

149) EcDH1_1320
( YP_006091281.1 )

Pili assembly chaperone, N-terminal

NC_017625
(Escherichia coli DH1)

7e-48

150) yfcS
( YP_006129675.1 )

putative periplasmic pilus chaperone

NC_017638
(Escherichia coli DH1)

7e-48

151) mrfD
( YP_006116027.1 )

putative fimbrial chaperone

NC_017633
(Escherichia coli ETEC H10407)

7e-48

152) yfcS
( YP_001731272.1 )

periplasmic pilus chaperone

NC_010473
(Escherichia coli K-12)

7e-48

153) yfcS
( YP_002927307.1 )

putative periplasmic pilus chaperone

NC_012759
(Escherichia coli K-12)

7e-48

154) yfcS
( YP_007557520.1 )

predicted periplasmic pilin chaperone

NC_020518
(Escherichia coli K-12)

7e-48

155) yfcS
( YP_490578.1 )

periplasmic pilus chaperone

NC_007779
(Escherichia coli K-12)

7e-48

156) yfcS
( NP_416839.1 )

predicted periplasmic pilus chaperone

NC_000913
(Escherichia coli K12)

7e-48

157) P12B_c2430
( YP_006169443.1 )

hypothetical protein

NC_017663
(Escherichia coli P12b)

7e-48

158) SeD_A0216
( YP_002214157.1 )

chaperone protein PapD

NC_011205
(Salmonella enterica CT_02021853)

8e-48

159) stfD
( YP_002242364.1 )

periplasmic fimbrial chaperone stfd

NC_011294
(Salmonella enterica P125109)

8e-48

160) SeAg_B0234
( YP_002145201.1 )

chaperone protein PapD

NC_011149
(Salmonella enterica SL483)

8e-48

161) ECL_00372
( YP_003610887.1 )

Chaperone protein PmfD

NC_014121
(Enterobacter cloacae ATCC 13047)

1e-47

162) ST548_p3593
( YP_007391005.1 )

Pi-fimbriae chaperone protein

NC_020181
(Enterobacter aerogenes EA1509E)

1e-47

163) yfcS
( YP_003000000.2 )

periplasmic pilus chaperone

NC_012892
(Escherichia coli BL21(DE3))

1e-47

164) yfcS
( YP_003054854.1 )

periplasmic pilus chaperone

NC_012971
(Escherichia coli BL21(DE3))

1e-47

165) ECBD_1323
( YP_003035571.1 )

Pili assembly chaperone, N-terminal

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

1e-47

166) yfcS
( YP_003045453.1 )

putative periplasmic pilus chaperone

NC_012967
(Escherichia coli REL606)

1e-47

167) SEEH1578_10105
( YP_008246088.1 )

fimbrial chaperone protein StfD

NC_021810
(Salmonella enterica 41578)

2e-47

168) stfD
( YP_005395709.1 )

periplasmic fimbrial chaperone stfd

NC_017046
(Salmonella enterica 798)

2e-47

169) SU5_0846
( YP_006086489.1 )

Periplasmic fimbrial chaperone StfD

NC_017623
(Salmonella enterica B182)

2e-47

170) SEEB0189_18320
( YP_008309948.1 )

fimbrial chaperone protein StdC

NC_021844
(Salmonella enterica CFSAN000189)

2e-47

171) CFSAN002069_08160
( YP_008250460.1 )

fimbrial chaperone protein StdC

NC_021812
(Salmonella enterica CFSAN002069)

2e-47

172) SNSL254_A0218
( YP_002039437.1 )

chaperone protein PapD

NC_011080
(Salmonella enterica SL254)

2e-47

173) SeHA_C0233
( YP_002044186.1 )

chaperone protein PapD

NC_011083
(Salmonella enterica SL476)

2e-47

174) stfD
( YP_005241146.1 )

putative periplasmic fimbrial chaperone

NC_016857
(Salmonella enterica ST4/74)

2e-47

175) SN31241_11910
( YP_008359109.1 )

fimbrial chaperone yfcS

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-47

176) PCC21_008540
( YP_006645510.1 )

fimbrial chaperone

NC_018525
(Pectobacterium carotovorum PCC21)

2e-47

177) SBOV01631
( YP_008504062.1 )

chaperone protein PapD

NC_022241
(Salmonella enterica 3114)

3e-47

178) SE451236_07005
( YP_008264457.1 )

fimbrial chaperone protein StdC

NC_021820
(Salmonella enterica 08-1736)

3e-47

179) stfD
( YP_005235867.1 )

putative periplasmic fimbrial chaperone

NC_016856
(Salmonella enterica 14028S)

3e-47

180) SSPA0197
( YP_002141042.1 )

periplasmic fimbrial chaperone

NC_011147
(Salmonella enterica AKU12601)

3e-47

181) stfD
( YP_149546.1 )

periplasmic fimbrial chaperone

NC_006511
(Salmonella enterica ATCC 9150)

3e-47

182) STMMW_02031
( YP_005231282.1 )

periplasmic fimbrial chaperone stfd

NC_016854
(Salmonella enterica D23580)

3e-47

183) stfD
( NP_459202.1 )

periplasmic fimbrial chaperone

NC_003197
(Salmonella enterica LT2)

3e-47

184) stfD
( YP_005180133.1 )

periplasmic fimbrial chaperone stfd

NC_016810
(Salmonella enterica SL1344)

3e-47

185) STMDT12_C01980
( YP_005245894.1 )

putative periplasmic fimbrial chaperone

NC_016860
(Salmonella enterica T000240)

3e-47

186) STU288_00995
( YP_007901308.1 )

fimbrial chaperone protein StfD

NC_021151
(Salmonella enterica U288)

3e-47

187) stfD
( YP_005250766.1 )

putative periplasmic fimbrial chaperone

NC_016863
(Salmonella enterica UK-1)

3e-47

188) ECO103_2801
( YP_003222702.1 )

chaperone

NC_013353
(Escherichia coli 12009)

4e-47

189) O3M_07760
( YP_006769213.1 )

chaperone

NC_018650
(Escherichia coli 2009EL-2050)

4e-47

190) O3O_17825
( YP_006783340.1 )

chaperone

NC_018661
(Escherichia coli 2009EL-2071)

4e-47

191) O3K_07810
( YP_006778269.1 )

chaperone

NC_018658
(Escherichia coli 2011C-3493)

4e-47

192) yfcS
( YP_002403603.1 )

periplasmic pilus chaperone

NC_011748
(Escherichia coli 55989)

4e-47

193) APECO78_15500
( YP_007382267.1 )

chaperone

NC_020163
(Escherichia coli APEC O78)

4e-47

194) yfcS
( YP_002387805.1 )

putative periplasmic pilus exported chaperone

NC_011741
(Escherichia coli IAI1)

4e-47

195) EKO11_1429
( YP_005277122.1 )

Pili assembly chaperone, N-terminal protein

NC_016902
(Escherichia coli KO11FL)

4e-47

196) yfcS
( YP_006164527.1 )

putative chaperone

NC_017660
(Escherichia coli KO11FL)

4e-47

197) LY180_12100
( YP_008565508.1 )

fimbrial protein StfD

NC_022364
(Escherichia coli LY180)

4e-47

198) ECSE_2646
( YP_002293921.1 )

putative fimbrial chaperone

NC_011415
(Escherichia coli SE11)

4e-47

199) esoC
( YP_006125198.1 )

periplasmic pilin chaperone

NC_017635
(Escherichia coli W)

4e-47

200) yfcS
( YP_006173919.1 )

putative chaperone

NC_017664
(Escherichia coli W)

4e-47

201) yfcS
( YP_006144771.1 )

fimbrial chaperone protein

NC_017646
(Escherichia coli CE10)

5e-47

202) yfcS
( YP_002408444.1 )

putative periplasmic pilus exported chaperone

NC_011750
(Escherichia coli IAI39)

5e-47

203) EcSMS35_2495
( YP_001744539.1 )

fimbrial chaperone protein

NC_010498
(Escherichia coli SMS-3-5)

5e-47

204) stfD
( YP_215184.1 )

periplasmic fimbrial chaperone

NC_006905
(Salmonella enterica SC-B67)

5e-47

205) SbBS512_E2716
( YP_001881160.1 )

fimbrial chaperone protein

NC_010658
(Shigella boydii CDC 3083-94)

5e-47

206) yfcS
( YP_003500395.1 )

chaperone protein PapD

NC_013941
(Escherichia coli CB9615)

6e-47

207) ECO55CA74_14245
( YP_006159978.1 )

chaperone protein PapD

NC_017656
(Escherichia coli RM12579)

6e-47

208) yfcS
( YP_006139535.1 )

putative periplasmic fimbrial chaperone

NC_017644
(Escherichia coli NA114)

7e-47

209) ECSF_2213
( YP_003350203.1 )

putative chaperone

NC_013654
(Escherichia coli SE15)

7e-47

210) ECP_2375
( YP_670270.1 )

fimbrial chaperone

NC_008253
(Escherichia coli 536)

8e-47

211) yfcS
( YP_006106704.1 )

putative periplasmic chaperone YfcS precursor

NC_017631
(Escherichia coli ABU 83972)

1e-46

212) yfcS
( NP_754764.1 )

fimbrial chaperone yfcS

NC_004431
(Escherichia coli CFT073)

1e-46

213) yfcS
( YP_006154773.1 )

fimbrial chaperone yfcS

NC_017652
(Escherichia coli clone D i14)

1e-46

214) yfcS
( YP_006149854.1 )

fimbrial chaperone yfcS

NC_017651
(Escherichia coli clone D i2)

1e-46

215) PC1_0824
( YP_003016412.1 )

Pili assembly chaperone, N-terminal

NC_012917
(Pectobacterium carotovorum PC1)

1e-46

216) yfcS
( YP_853438.1 )

periplasmic chaperone YfcS

NC_008563
(Escherichia coli APEC O1)

2e-46

217) ECOK1_2618
( YP_006101765.1 )

periplasmic pilus chaperone family protein

NC_017628
(Escherichia coli IHE3034)

2e-46

218) papD_2
( YP_008572318.1 )

Chaperone protein papD precursor

NC_022370
(Escherichia coli PMV-1)

2e-46

219) yfcS
( YP_002392162.1 )

periplasmic pilus exported chaperone

NC_011742
(Escherichia coli S88)

2e-46

220) UM146_05130
( YP_006109943.1 )

putative periplasmic pilus exported chaperone

NC_017632
(Escherichia coli UM146)

2e-46

221) yfcS
( YP_541619.1 )

periplasmic chaperone YfcS

NC_007946
(Escherichia coli UTI89)

2e-46

222) stfD
( YP_002225337.1 )

periplasmic fimbrial chaperone stfd

NC_011274
(Salmonella enterica 287/91)

8e-47

223) stfD
( YP_008479950.1 )

periplasmic fimbrial chaperone stfd

NC_022221
(Salmonella enterica CDC1983-67)

8e-47

224) stfD
( YP_005211493.1 )

periplasmic fimbrial chaperone stfd

NC_016831
(Salmonella enterica RKS5078)

8e-47

225) I137_00950
( YP_008379776.1 )

fimbrial chaperone protein StdC

NC_021984
(Salmonella enterica S06004)

8e-47

226) LF82_370
( YP_002557226.1 )

periplasmic chaperone YfcS

NC_011993
(Escherichia coli LF82)

2e-46

227) NRG857_11830
( YP_006120716.1 )

putative periplasmic pilus exported chaperone

NC_017634
(Escherichia coli NRG 857C)

2e-46

228) SG2861
( YP_002227698.1 )

periplasmic fimbrial chaperone

NC_011274
(Salmonella enterica 287/91)

2e-46

229) SBOV29961
( YP_008506817.1 )

chaperone protein PapD

NC_022241
(Salmonella enterica 3114)

2e-46

230) SEEH1578_00795
( YP_008244238.1 )

periplasmic fimbrial chaperone protein SteC

NC_021810
(Salmonella enterica 41578)

2e-46

231) SU5_03438
( YP_006089041.1 )

Periplasmic fimbrial chaperone

NC_017623
(Salmonella enterica B182)

2e-46

232) SPUCDC_2945
( YP_008482521.1 )

periplasmic fimbrial chaperone

NC_022221
(Salmonella enterica CDC1983-67)

2e-46

233) CFSAN002050_21110
( YP_008262093.1 )

fimbrial chaperone protein StdC

NC_021818
(Salmonella enterica CFSAN002050)

2e-46

234) CFSAN002069_17485
( YP_008252257.1 )

fimbrial chaperone protein StdC

NC_021812
(Salmonella enterica CFSAN002069)

2e-46

235) SeD_A3271
( YP_002216925.1 )

chaperone protein PapD

NC_011205
(Salmonella enterica CT_02021853)

2e-46

236) SEN2796
( YP_002244868.1 )

periplasmic fimbrial chaperone

NC_011294
(Salmonella enterica P125109)

2e-46

237) steC
( YP_002638540.1 )

periplasmic fimbrial chaperone

NC_012125
(Salmonella enterica RKS4594)

2e-46

238) SPUL_2959
( YP_005214067.1 )

periplasmic fimbrial chaperone

NC_016831
(Salmonella enterica RKS5078)

2e-46

239) I137_14075
( YP_008382213.1 )

fimbrial chaperone protein StdC

NC_021984
(Salmonella enterica S06004)

2e-46

240) stfD
( YP_217878.1 )

periplasmic fimbrial chaperone

NC_006905
(Salmonella enterica SC-B67)

2e-46

241) SNSL254_A3173
( YP_002042202.1 )

chaperone protein PapD

NC_011080
(Salmonella enterica SL254)

2e-46

242) SeHA_C3154
( YP_002046917.1 )

chaperone protein PapD

NC_011083
(Salmonella enterica SL476)

2e-46

243) SeAg_B3090
( YP_002147859.1 )

chaperone protein PapD

NC_011149
(Salmonella enterica SL483)

2e-46

244) SN31241_40610
( YP_008361976.1 )

Chaperone protein PapD

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-46

245) SPAB_03672
( YP_001589844.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-46

246) ECH74115_3479
( YP_002271748.1 )

chaperone protein PapD

NC_011353
(Escherichia coli EC4115)

3e-46

247) yfcS
( NP_288910.1 )

fimbrial chaperone

NC_002655
(Escherichia coli EDL933)

3e-46

248) ECs3220
( NP_311247.1 )

chaperone

NC_002695
(Escherichia coli Sakai)

3e-46

249) yfcS
( YP_003079066.1 )

periplasmic pilus chaperone

NC_013008
(Escherichia coli TW14359)

3e-46

250) CDCO157_2985
( YP_006313854.1 )

putative chaperone

NC_017906
(Escherichia coli Xuzhou21)

3e-46

251) yfcS
( YP_689821.1 )

chaperone

NC_008258
(Shigella flexneri 8401)

6e-46

252) SEEB0189_05370
( YP_008307425.1 )

fimbrial chaperone protein StdC

NC_021844
(Salmonella enterica CFSAN000189)

6e-46

253) SSPA2621
( YP_002143466.1 )

periplasmic fimbrial chaperone

NC_011147
(Salmonella enterica AKU12601)

7e-46

254) steC
( YP_151976.1 )

periplasmic fimbrial chaperone

NC_006511
(Salmonella enterica ATCC 9150)

7e-46

255) steC
( NP_457345.1 )

periplasmic fimbrial chaperone

NC_003198
(Salmonella enterica CT18)

7e-46

256) STBHUCCB_30120
( YP_005218510.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

7e-46

257) steC
( NP_806554.1 )

periplasmic fimbrial chaperone

NC_004631
(Salmonella enterica Ty2)

7e-46

258) TY21A_14455
( YP_007927129.1 )

periplasmic fimbrial chaperone

NC_021176
(Salmonella enterica Ty21a)

7e-46

259) SSON53_13965
( YP_005457317.1 )

Pili assembly chaperone, N-terminal protein

NC_016822
(Shigella sonnei 53G)

2e-45

260) yfcS
( YP_311271.1 )

chaperone

NC_007384
(Shigella sonnei Ss046)

2e-45

261) EcE24377A_2631
( YP_001463681.1 )

periplasmic pilus chaperone family protein

NC_009801
(Escherichia coli E24377A)

2e-45

262) CFSAN001921_16420
( YP_008256623.1 )

fimbrial chaperone protein StdC

NC_021814
(Salmonella enterica CFSAN001921)

3e-45

263) M621_24570
( YP_008161659.1 )

fimbrial protein StfD

NC_021659
(Serratia plymuthica S13)

4e-45

264) yfcS
( YP_005196635.1 )

fimbrial chaperone YfcS

NC_016816
(Pantoea ananatis LMG 5342)

3e-44

265) yfcS
( YP_005934885.1 )

fimbrial chaperone YfcS

NC_017531
(Pantoea ananatis AJ13355)

7e-44

266) yfcS
( YP_003521012.1 )

hypothetical protein

NC_013956
(Pantoea ananatis LMG 20103)

7e-44

267) PANA5342_1334
( YP_005194764.1 )

fimbrial chaperone

NC_016816
(Pantoea ananatis LMG 5342)

7e-44

268) PAGR_g1307
( YP_005992053.1 )

fimbrial chaperone YfcS

NC_017554
(Pantoea ananatis PA13)

7e-44

269) W5S_0952
( YP_006281942.1 )

Chaperone protein PapD

NC_017845
(Pectobacterium sp. SCC3193)

2e-43

270) Pecwa_1058
( YP_003258482.1 )

Pili assembly chaperone, N-terminal

NC_013421
(Pectobacterium wasabiae WPP163)

2e-43

271) sbbB
( YP_004729208.1 )

fimbrial chaperone protein

NC_015761
(Salmonella bongori NCTC 12419)

5e-43

272) MU9_86
( YP_007503505.1 )

Periplasmic fimbrial chaperone

NC_020418
(Morganella morganii KT)

4e-42

273) Entcl_3858
( YP_003943382.1 )

Pili assembly chaperone, N-terminal protein

NC_014618
(Enterobacter cloacae SCF1)

5e-41

274) EcDH1_2919
( YP_006092841.1 )

Pili assembly chaperone, N-terminal

NC_017625
(Escherichia coli DH1)

7e-40

275) ybgP
( YP_006128077.1 )

putative assembly protein

NC_017638
(Escherichia coli DH1)

7e-40

276) ETEC_0729
( YP_006114319.1 )

fimbrial chaperone

NC_017633
(Escherichia coli ETEC H10407)

7e-40

277) ybgP
( YP_001729704.1 )

assembly protein

NC_010473
(Escherichia coli K-12)

7e-40

278) ybgP
( YP_002925778.1 )

putative assembly protein

NC_012759
(Escherichia coli K-12)

7e-40

279) ybgP
( YP_007556256.1 )

predicted assembly protein

NC_020518
(Escherichia coli K-12)

7e-40

280) ybgP
( YP_488997.1 )

assembly protein

NC_007779
(Escherichia coli K-12)

7e-40

281) ybgP
( NP_415245.1 )

predicted periplasmic pilus chaperone

NC_000913
(Escherichia coli K12)

7e-40

282) P12B_c0687
( YP_006167734.1 )

hypothetical protein

NC_017663
(Escherichia coli P12b)

7e-40

283) A464_295
( YP_008320891.1 )

Periplasmic fimbrial chaperone

NC_021870
(Salmonella bongori N268-08)

3e-39

284) ybgP
( YP_002401807.1 )

chaperone, PapD family

NC_011748
(Escherichia coli 55989)

7e-38

285) ybgP
( YP_002386157.1 )

putative exported chaperone, PapD family

NC_011741
(Escherichia coli IAI1)

7e-38

286) ybgP
( YP_003233250.1 )

putative chaperone

NC_013364
(Escherichia coli 11128)

8e-38

287) ybgP
( YP_003220703.1 )

chaperone

NC_013353
(Escherichia coli 12009)

8e-38

288) APECO78_07110
( YP_007380597.1 )

chaperone, PapD family protein

NC_020163
(Escherichia coli APEC O78)

8e-38

289) EcE24377A_0743
( YP_001461876.1 )

periplasmic pilus chaperone family protein

NC_009801
(Escherichia coli E24377A)

8e-38

290) EKO11_3162
( YP_005278812.1 )

Pili assembly chaperone, N-terminal protein

NC_016902
(Escherichia coli KO11FL)

8e-38

291) ybgP
( YP_006166351.1 )

putative exported chaperone, PapD family protein

NC_017660
(Escherichia coli KO11FL)

8e-38

292) LY180_03790
( YP_008563890.1 )

fimbrial protein

NC_022364
(Escherichia coli LY180)

8e-38

293) ECSE_0776
( YP_002292051.1 )

putative fimbrial chaperone

NC_011415
(Escherichia coli SE11)

8e-38

294) ybgP
( YP_006123528.1 )

putative chaperone

NC_017635
(Escherichia coli W)

8e-38

295) ybgP
( YP_006172205.1 )

putative exported chaperone, PapD family protein

NC_017664
(Escherichia coli W)

8e-38

296) SbBS512_E0634
( YP_001879370.1 )

periplasmic pilus chaperone family protein

NC_010658
(Shigella boydii CDC 3083-94)

8e-38

297) ybgP
( YP_005726246.1 )

Periplasmic pilus chaperone family protein

NC_017328
(Shigella flexneri 2002017)

8e-38

298) ybgP
( NP_836291.1 )

chaperone

NC_004741
(Shigella flexneri 2457T)

8e-38

299) ybgP
( NP_706517.2 )

chaperone

NC_004337
(Shigella flexneri 301)

8e-38

300) ybgP
( YP_688175.1 )

chaperone

NC_008258
(Shigella flexneri 8401)

8e-38

301) SSON53_03575
( YP_005455292.1 )

chaperone, PapD family protein

NC_016822
(Shigella sonnei 53G)

8e-38

302) ybgP
( YP_309661.1 )

chaperone

NC_007384
(Shigella sonnei Ss046)

8e-38

303) Entcl_0711
( YP_003940270.1 )

Pili assembly chaperone, N-terminal protein

NC_014618
(Enterobacter cloacae SCF1)

1e-37

304) EcolC_2938
( YP_001725892.1 )

pili assembly chaperone

NC_010468
(Escherichia coli ATCC 8739)

3e-37

305) ybgP
( YP_002998510.2 )

ybgP

NC_012892
(Escherichia coli BL21(DE3))

3e-37

306) ybgP
( YP_003053323.1 )

assembly protein

NC_012971
(Escherichia coli BL21(DE3))

3e-37

307) ECBD_2944
( YP_003037144.1 )

Pili assembly chaperone, N-terminal

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

3e-37

308) ybgP
( YP_003043895.1 )

putative assembly protein

NC_012967
(Escherichia coli REL606)

3e-37

309) UMNK88_753
( YP_006132549.1 )

chaperone protein PapD

NC_017641
(Escherichia coli UMNK88)

3e-37

310) ECL_04374
( YP_003614852.1 )

fimbrial assembly protein

NC_014121
(Enterobacter cloacae ATCC 13047)

3e-37

311) ybgP
( YP_002411553.1 )

putative exported chaperone, PapD family

NC_011751
(Escherichia coli UMN026)

3e-37

312) EcHS_A0765
( YP_001457515.1 )

periplasmic pilus chaperone family protein

NC_009800
(Escherichia coli HS)

5e-37

313) EFER_2398
( YP_002383512.1 )

protein, chaperone

NC_011740
(Escherichia fergusonii ATCC 35469)

1e-36

314) EC042_0734
( YP_006095051.1 )

fimbrial chaperone

NC_017626
(Escherichia coli 042)

3e-36

315) ybgP
( YP_003227843.1 )

chaperone

NC_013361
(Escherichia coli 11368)

4e-36

316) ECL_04370
( YP_003614848.1 )

putative fimbrial chaperone

NC_014121
(Enterobacter cloacae ATCC 13047)

8e-35

317) Entas_3722
( YP_004830218.1 )

Pili assembly chaperone

NC_015968
(Enterobacter asburiae LF7a)

5e-34

318) NH44784_062511
( YP_008033310.1 )

Probable fimbrial chaperone protein

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

3e-33

• Sequence Alignments

1) ECP_4538 in NC_008253


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  397 bits (1492),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 244/244 (100%), Positives = 244/244 (100%), Gaps = 0/244 (0%)

Query  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60
            MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120
            AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240
            GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  KKEK  244
            KKEK
Sbjct  241  KKEK  244

2) papD in NC_017631


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  397 bits (1492),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 244/244 (100%), Positives = 244/244 (100%), Gaps = 0/244 (0%)

Query  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60
            MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120
            AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240
            GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  KKEK  244
            KKEK
Sbjct  241  KKEK  244

3) papD in NC_008563


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  397 bits (1492),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 244/244 (100%), Positives = 244/244 (100%), Gaps = 0/244 (0%)

Query  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60
            MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120
            AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240
            GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  KKEK  244
            KKEK
Sbjct  241  KKEK  244

4) papD in NC_011742


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  397 bits (1492),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 244/244 (100%), Positives = 244/244 (100%), Gaps = 0/244 (0%)

Query  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60
            MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120
            AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240
            GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  KKEK  244
            KKEK
Sbjct  241  KKEK  244

5) UM146_21670 in NC_017632


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  397 bits (1492),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 244/244 (100%), Positives = 244/244 (100%), Gaps = 0/244 (0%)

Query  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60
            MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120
            AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240
            GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  KKEK  244
            KKEK
Sbjct  241  KKEK  244

6) papD_2 in NC_004431


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  396 bits (1491),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 243/244 (99%), Positives = 244/244 (100%), Gaps = 0/244 (0%)

Query  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60
            MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWIENENQEKIIAGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120
            AWIENENQEKII+GPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240
            GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  KKEK  244
            KKEK
Sbjct  241  KKEK  244

7) papD in NC_011750


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  396 bits (1491),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 243/244 (99%), Positives = 244/244 (100%), Gaps = 0/244 (0%)

Query  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60
            MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWIENENQEKIIAGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120
            AWIENENQEKII+GPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240
            GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  KKEK  244
            KKEK
Sbjct  241  KKEK  244

8) papD in NC_017644


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  396 bits (1491),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 243/244 (99%), Positives = 244/244 (100%), Gaps = 0/244 (0%)

Query  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60
            MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWIENENQEKIIAGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120
            AWIENENQEKII+GPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240
            GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  KKEK  244
            KKEK
Sbjct  241  KKEK  244

9) papD in NC_011751


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  396 bits (1491),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 243/244 (99%), Positives = 244/244 (100%), Gaps = 0/244 (0%)

Query  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60
            MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWIENENQEKIIAGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120
            AWIENENQEKII+GPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240
            GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  KKEK  244
            KKEK
Sbjct  241  KKEK  244

10) papD in NC_007946


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  388 bits (1459),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 239/239 (100%), Positives = 239/239 (100%), Gaps = 0/239 (0%)

Query  1    MIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIEN  60
            MIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIEN
Sbjct  6    MIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIEN  65

Query  61   ENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEK  120
            ENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEK
Sbjct  66   ENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEK  125

Query  121  ANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  180
            ANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS
Sbjct  126  ANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  181  EKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  239
            EKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

11) papD in NC_017646


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  388 bits (1458),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 238/239 (99%), Positives = 239/239 (100%), Gaps = 0/239 (0%)

Query  1    MIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIEN  60
            MIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIEN
Sbjct  6    MIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIEN  65

Query  61   ENQEKIIAGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEK  120
            ENQEKII+GPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEK
Sbjct  66   ENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEK  125

Query  121  ANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  180
            ANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS
Sbjct  126  ANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  181  EKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  239
            EKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

12) ECP_2969 in NC_008253


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  336 bits (1262),  Expect = 8e-94, Method: Compositional matrix adjust.
 Identities = 187/243 (77%), Positives = 219/243 (91%), Gaps = 1/243 (0%)

Query  48   MQKMKPALKKTLMAVACLSAVPAAQAAVSLDRTRAIFNGDEKSMTLNIANDNKQLPYLAQ  107
            M K+    KK LMA   L  +++A+AAVSLDRTRA+F+G EKSMTL+I+NDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  108  AWVENEKKEKITTGPIIATPPVQRLEPGSKSMVRLTSTPDISRLPQDRESLFYFSLREIP  167
            AW+ENE++EKI TGP+IATPPVQRLEPG+KSMVRL++TPDIS+LPQDRESLFYF+LREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  168  PKSDKANVLQIALQTKIKLFYRPESIKAKPNAVWQDQLVLNKTSGGYRIDNPTPYYVTVI  227
            P+S+KANVLQIALQTKIKLFYRP +IK++PN VWQDQL+LNK SGGYRI+NPTPYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  228  GIGGSEKQAREGEFDAVMLAPKSTQMVKSGTYNTPYLSYINDYGGRPVLQFSCGGSRCTA  287
            G+GGSEKQA EGEF++VML+P+S Q VKS+ YNTPYLSYINDYGGRPVL F C GSRC+ 
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCS-  239

Query  288  VKK  290
            VKK
Sbjct  240  VKK  242

13) papD in NC_004431


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  328 bits (1231),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 200/201 (99%), Positives = 201/201 (100%), Gaps = 0/201 (0%)

Query  1    MTLDISNDNKQLPYLAQAWIENENQEKIIAGPVIATPPVQRLEPGAKSMVRLSTTPDISK  60
            MTLDISNDNKQLPYLAQAWIENENQEKII+GPVIATPPVQRLEPGAKSMVRLSTTPDISK
Sbjct  44   MTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISK  103

Query  61   LPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKV  120
            LPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKV
Sbjct  104  LPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKV  163

Query  121  SGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDY  180
            SGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDY
Sbjct  164  SGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDY  223

Query  181  GGRPVLSFICNGSRCSVKKEK  201
            GGRPVLSFICNGSRCSVKKEK
Sbjct  224  GGRPVLSFICNGSRCSVKKEK  244

14) ETAC_10675 in NC_020796


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  322 bits (1209),  Expect = 9e-90, Method: Compositional matrix adjust.
 Identities = 176/242 (73%), Positives = 215/242 (89%), Gaps = 0/242 (0%)

Query  1    MFELSHVMNKTLMVIACLSFSPLTQAAISLDRTRAIFNGGERSMTLNIANDNKQLPYLAQ  60
            M  LS + +K LM    L   + ++AA+SLDRTRA+F+G+E+SMTL+I+NDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLENDKQEKITTGPLIATPPVQRLEPGAKSMVRIASTAEISNLPQDRESLFYFNLREIP  120
            AW+EN++QEKI TGP+IATPPVQRLEPGAKSMVR+++T++IS+LPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSDKANVLQIALQTKIKLFYRPQSIATQPNAIWQDQLVLNKVSGGYLIDNPSPYYVTVI  180
            PRS+KANVLQIALQTKIKLFYRP +I T+PN +WQDQL+LNKVSGGY I+NP+PYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGANAKQAQDGEFEAVMLAPKSSRTVKSGGYATPYLSYINDYGGRPVLQFVCAGDRCSA  240
            GLG++ KQA++GEFE+VML+P+S +TVKS+ Y TPYLSYINDYGGRPVL F+C G RCS 
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  LK  242
             K
Sbjct  241  KK  242

15) ETAE_2251 in NC_013508


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  319 bits (1197),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 176/242 (73%), Positives = 213/242 (89%), Gaps = 0/242 (0%)

Query  1    MFKLSRAMNKTVMVIACLSFSPLSQAAISLDRTRAIFNGGERSMTLNIANDNKQLPYLAQ  60
            M KLS   +K +M    L   + ++AA+SLDRTRA+F+G+E+SMTL+I+NDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLENDKQEKITTGPLIVTPPVQRLEPGAKSMVRIASTAEISSLPQDRESLFYFNLREIP  120
            AW+EN++QEKI TGP+I TPPVQRLEPGAKSMVR+++T++IS LPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPKAIATQPNAVWQDQLVLNKVSGGYLIDNPSPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRP AI T+PN VWQDQL+LNKVSGGY I+NP+PYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGANAKQAQDGDFEAVMLAPKSSRTVKSGSYTTPYLSYINDYGGRPALQFVCAGDRCSA  240
            GLG++ KQA++G+FE+VML+P+S +TVKS++Y TPYLSYINDYGGRP L F+C G RCS 
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  LK  242
             K
Sbjct  241  KK  242

16) papD in NC_017309


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  319 bits (1197),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 176/242 (73%), Positives = 213/242 (89%), Gaps = 0/242 (0%)

Query  1    MFKLSRAMNKTVMVIACLSFSPLSQAAISLDRTRAIFNGGERSMTLNIANDNKQLPYLAQ  60
            M KLS   +K +M    L   + ++AA+SLDRTRA+F+G+E+SMTL+I+NDNKQLPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLENDKQEKITTGPLIVTPPVQRLEPGAKSMVRIASTAEISSLPQDRESLFYFNLREIP  120
            AW+EN++QEKI TGP+I TPPVQRLEPGAKSMVR+++T++IS LPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  121  PRSEKANVLQIALQTKIKLFYRPKAIATQPNAVWQDQLVLNKVSGGYLIDNPSPYYVTVI  180
            PRSEKANVLQIALQTKIKLFYRP AI T+PN VWQDQL+LNKVSGGY I+NP+PYYVTVI
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  181  GLGANAKQAQDGDFEAVMLAPKSSRTVKSGSYTTPYLSYINDYGGRPALQFVCAGDRCSA  240
            GLG++ KQA++G+FE+VML+P+S +TVKS++Y TPYLSYINDYGGRP L F+C G RCS 
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  241  LK  242
             K
Sbjct  241  KK  242

17) SMWW4_v1c06200 in NC_020211


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  286 bits (1069),  Expect = 9e-79, Method: Compositional matrix adjust.
 Identities = 149/213 (70%), Positives = 183/213 (86%), Gaps = 0/213 (0%)

Query  29   DRTRAVFNGDGKSISLNISNDNKQLPYLAQAWLEDAKQQKVTQGALVVTPPVQRLEPGAK  88
            DRTRAVF+G  KS++L+ISNDNKQLPYLAQAW+E+ +Q+K+  G+++ TPPVQRLEPGAK
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  89   SMLRVSATPAAAQLPQDRETLFYFNLREIPPRSDKPNVLQIALQTKIKLFYRPKAIVAAP  148
            SM+R+S+TP  ++LPQDRE+LFYFNLREIPPRS+K+NVLQIALQTKIKLFYRP AI + P
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP  150

Query  149  GTVWQDQLVLHEEGNGYRIENPTPYYITVIGIGNTPKQSESGAFEVVMVAPKSSAQVKSA  208
              VWQDQL+L+  + GYRIENPTPYY+TVIG+G + KQ+E G FE VM++P+S   VKSA
Sbjct  151  NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSA  210

Query  209  RYATPYLTYINDYGGRPVLTFTCTGGRCSAKKA  241
             Y TPYL+YINDYGGRPVL+F C G+RCS KK 
Sbjct  211  NYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE  243

18) BB2000_2353 in NC_022000


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  275 bits (1030),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 146/234 (63%), Positives = 197/234 (85%), Gaps = 0/234 (0%)

Query  2    KKISFLLLGLMVTSNSYAAISLDRTRAIYEGGSNALVINITNDNKQLPYLAQTWIENDKN  61
            KKI    + L V S + AA+SLDRTRA+++G+ +++ ++I+NDNKQLPYLAQ+WIEN+++
Sbjct  9    KKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  62   EKIELGPLIATPLVQRLEPGDKALIKVSATPDIEKLPNDRETLFYFNVREVPPKAEDNNV  121
            EKI  GP+IATP VQRLEPG K+++++S+TPDI KLP+DRE+LFYFN+RE+PP++E  NV
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANV  128

Query  122  LQIALHTKIKLFYRPKQILREPNAIWQDQLVLNKLSDGYEIENPTPYYVTVFGIGGSKKE  181
            LQIAL+TKIKLFYRP  I   PN +WQDQL+LNK+S+GY IENPTPYYVTV+G+GGS K+
Sbjct  129  LQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQ  188

Query  182  AVDSEFNAVMIAPKSSQRVNSKVYSTPYLSYINDYGGRPTIKFQCQANRCVAEK  235
            A ++EF++VM++P+S Q V+S  Y+TPYLSYINDYGGRP + F C+++RC   K
Sbjct  189  AEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKK  242

19) PMI2220 in NC_010554


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  275 bits (1030),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 146/234 (63%), Positives = 197/234 (85%), Gaps = 0/234 (0%)

Query  2    KKISFLLLGLMVTSNSYAAISLDRTRAIYEGGSNALVINITNDNKQLPYLAQTWIENDKN  61
            KKI    + L V S + AA+SLDRTRA+++G+ +++ ++I+NDNKQLPYLAQ+WIEN+++
Sbjct  9    KKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  62   EKIELGPLIATPLVQRLEPGDKALIKVSATPDIEKLPNDRETLFYFNVREVPPKAEDNNV  121
            EKI  GP+IATP VQRLEPG K+++++S+TPDI KLP+DRE+LFYFN+RE+PP++E  NV
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANV  128

Query  122  LQIALHTKIKLFYRPKQILREPNAIWQDQLVLNKLSDGYEIENPTPYYVTVFGIGGSKKE  181
            LQIAL+TKIKLFYRP  I   PN +WQDQL+LNK+S+GY IENPTPYYVTV+G+GGS K+
Sbjct  129  LQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQ  188

Query  182  AVDSEFNAVMIAPKSSQRVNSKVYSTPYLSYINDYGGRPTIKFQCQANRCVAEK  235
            A ++EF++VM++P+S Q V+S  Y+TPYLSYINDYGGRP + F C+++RC   K
Sbjct  189  AEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKK  242

20) YPTS_3499 in NC_010634


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  273 bits (1020),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 142/242 (59%), Positives = 197/242 (82%), Gaps = 5/242 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPAPGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I   P ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSICRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AK  237
             K
Sbjct  241  KK  242

21) papD in NC_009708


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1019),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 142/242 (59%), Positives = 198/242 (82%), Gaps = 5/242 (2%)

Query  1    MKKLSLIA----LTSTLVFTSYAANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F   +A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPAPGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I   P ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSICRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AK  237
             K
Sbjct  241  KK  242

22) A1122_01560 in NC_017168


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

23) papD in NC_010159


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

24) YPA_3094 in NC_008150


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

25) YPC_3875 in NC_017265


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

26) fimC6 in NC_005810


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

27) YPO0699 in NC_003143


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

28) YPD4_0609 in NC_017154


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

29) YPD8_0609 in NC_017160


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

30) y3479 in NC_004088


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

31) YPN_0556 in NC_008149


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

32) YPDSF_0482 in NC_009381


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

33) YPZ3_0655 in NC_014029


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

34) YPTB3362 in NC_006155


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

35) YPK_0696 in NC_010465


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/243 (59%), Positives = 196/243 (81%), Gaps = 5/243 (2%)

Query  1    MKKLSLIA----LTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQ  56
            M KLS+I     +++  +F    A+AA++LDRTR +++G +KS++L+ISN+NK LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  57   AWIENEQQQKV-TTPLVATPPVQRVEAGKKSAVRISATPEALKLPQDRESLFYFNLREIP  115
            AWIENE+Q+K+ T P++ATPPVQR+E+G KS VR+S+TP+  KLPQDRESLFYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  116  PRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQGFRLENPTPYYITVV  175
            PRSEK+NV+QIALQTKIKLFYRP +I     ++WQ+QL+L+K + G+R+ENPTPYY+TV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  176  GLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRA  235
            GL+   K + +++F+ +M++P+S   +KSA++ +P L+YINDYGGRP LSF C+GS C  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

Query  236  AKA  238
             K 
Sbjct  241  KKE  243

36) S70_12310 in NC_017731


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  241 bits (901),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 126/229 (56%), Positives = 183/229 (80%), Gaps = 0/229 (0%)

Query  14   GIAVFVSMSAYSAVTLDRTRIIFPGTEKSINVTISNDNPEEAYLAQSWIEDLQGNKLTKG  73
            +I++FV  +A +AV+LDRTR +F G+EKS+ + ISNDN + +YLAQ+WIE+ + +K+  G
Sbjct  15   AIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITG  74

Query  74   AILATPPLQRIEPMSNSLVRLSTTPALSQLPQDRESVFYFNLREVPPKSTDGNTLQIALQ  133
            +++ATPP+QR+EP ++S+VRLSTTP +S+LPQDRES+FYFNLRE+PP+S  +N LQIALQ
Sbjct  75   PVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQ  134

Query  134  SRVKLFYRPASILPESDTKWAHQVTLTKIAKGYRINNTTPFHLTVIGLGNSQAAAEHNSF  193
            +++KLFYRPA+I   ++  W +Q+ L K++ GYRI+N TP+ +TVIGLG S+  AE+  F
Sbjct  135  TKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEF  194

Query  194  DVVMVPPKSTQDVVSPALSTPYLTYINDYGGKPTLAFRCQGETCTVTGE  242
            + VM++P+S Q V S+  +TPYL+YINDYGG+P L+F C+G  C+V  E
Sbjct  195  ETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE  243

37) S70_07575 in NC_017731


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  237 bits (884),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 123/234 (53%), Positives = 185/234 (80%), Gaps = 2/234 (0%)

Query  4    KLLLIPL-LFIAHNSMAAVSLDRTRAIVEGSSNPVIINIENQSDTLPYLAQAWIDDKDGN  62
            K+L+ ++ LF+   + AAVSLDRTRA+ +GS +++ ++I N++  LPYLAQAWI++ + +
Sbjct  10   KILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQE  69

Query  63   KLTTGPLIATPLVQRLEPNVKSMIRISTT-DVSQLPKDRESVYYFNLREIPPKSDKPIVM  121
            K+ TGP+IATP VQRLEP  KSM+R+STT D+S+LP+DRES++YFNLREIPP+S+K+ V+
Sbjct  70   KIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVL  129

Query  122  QVALQSRIKLFYRPEAILDKAKTNWALDLELQSVSNGYVVKNTSPFYLTVIGLAGDRNKS  181
            Q+ALQ++IKLFYRP AI  +++  W  +L L+ VS GY + N +P+Y+TVIGL+G  +++
Sbjct  130  QIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQA  189

Query  182  ENGAFDSFMIEPFGSYQVKTAHFQKPYLTYINDYGGRPTVSFNCDASVCKADKQ  235
            E+G F++ M+ P +   VK+A+++ PYL+YINDYGGRP +SF C++S C   K+
Sbjct  190  EEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE  243

38) mrfD in NC_012962


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  232 bits (866),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 127/246 (52%), Positives = 186/246 (76%), Gaps = 7/246 (2%)

Query  2    KLKNTMNAATIAVLSLSVVSEARAAIALDRTRIVFNGEEKSTSMDISNQNKELPYLAQGW  61
            KL    +   +A ++L V+S A AA++LDRTR VF+G EKS ++DISN+NK+LPYLAQ+W
Sbjct  3    KLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAW  62

Query  62   IEDEQGNKI-NGPLVVTPPVQRVEPGERSQVKIQSLPTTAQLPQDRESLFYFNLREIPPR  120
            IE+E+ +KI  GP++ TPPVQR+EPG +S V++ + P  ++LPQDRESLFYFNLREIPPR
Sbjct  63   IENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPR  122

Query  121  SKKPNTLQIALQTRIKLFYRPKAIFAGRTELDNPWQEKMTLTRQGDQYQVNNPTPYYITV  180
            S K+N LQIALQT+IKLFYRP AI   +T  ++ WQ+++ L + ++ Y+++NPTPYY+TV
Sbjct  123  SEKANVLQIALQTKIKLFYRPAAI---KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  181  VDASNQLKGPTVAGFQPLMVAPKSSAVLRGHVGALGSAPVLTYINDYGGRPQLTFSCAGN  240
            ++ +   K +  + F+ +M++P+S   ++   +A  ++P L+YINDYGGRP L+F C G+
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVK---SANYNTPYLSYINDYGGRPVLSFICNGS  236

Query  241  HCQVAK  246
            +C V K
Sbjct  237  RCSVKK  242

39) PMI0300 in NC_010554


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  232 bits (864),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 117/233 (51%), Positives = 180/233 (78%), Gaps = 0/233 (0%)

Query  19   ILVGYSIFISMAAHSAVTLDRTRIIFPGTEKSINITISNDNPEEAYLAQSWIEDLQGNKL  78
            ++ + ++F+  +A++AV+LDRTR +F G+EKS+ + ISNDN + +YLAQ+WIE+ + +K+
Sbjct  12   LMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKI  71

Query  79   TKGAILATPPLQRIEPNSYSLVRLSTTPELHKLPQDRESVFYFNLREVPPKSTDGNTLQI  138
              G+++ATPP+QR+EP + S+VRLSTTP++ KLPQDRES+FYFNLRE+PP+S  +N LQI
Sbjct  72   ITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQI  131

Query  139  ALQSRVKLFYRPNSILSEAETKWTHKVTLTKTAQGYRVNNITPFNLTIIGFGNSKAAAEK  198
            ALQ+++KLFYRP +I + ++  W +++ L K + GYR++N TP+ +T+IG+G S   AE 
Sbjct  132  ALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEE  191

Query  199  NPFDVVMVPPKSTHDIASSILSTPYLTYINDYGGKPSLVFRCQGDTCVVTGEQ  251
              F+ VM++P+S + + S+  +TPYL+YINDYGG+P L F C+G  C V  E+
Sbjct  192  GEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

40) mrfD in NC_005126


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  231 bits (860),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 126/244 (52%), Positives = 188/244 (78%), Gaps = 7/244 (2%)

Query  2    KLKNTINVVTIAILSLSVISESMAAIALDRTRVVFNGGDKSTSMDISNQNKELPYLAQGW  61
            KL    + + +A ++L VIS + AA++LDRTR VF+G++KS ++DISN+NK+LPYLAQ+W
Sbjct  3    KLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAW  62

Query  62   IEDEQGNKI-NGPLVVTPPVQRVEPGAKSQVKIQSLPTIAQLPQDRESLFYFNLREIPPR  120
            IE+E+ +KI  GP++ TPPVQR+EPGAKS V++ + P I++LPQDRESLFYFNLREIPPR
Sbjct  63   IENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPR  122

Query  121  SKKPNTLQIALQTRIKLFYRPKAIFASRTDLDNPWQEKMTLTRQGDRYQVNNPTPYYITV  180
            S K+N LQIALQT+IKLFYRP AI   +T  ++ WQ+++ L + ++ Y+++NPTPYY+TV
Sbjct  123  SEKANVLQIALQTKIKLFYRPAAI---KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  181  VDAASQLKGKTVVDFKPLMIAPKSNVVLSGSAGALGSAPVLTYVNDYGGRPQLIFSCSGN  240
            ++ ++  K     +F  +M++P+S+  + ++     ++P L+Y+NDYGGRP L F C+G+
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSAN---YNTPYLSYINDYGGRPVLSFICNGS  236

Query  241  HCQV  244
            +C V
Sbjct  237  RCSV  240

41) S70_16080 in NC_017731


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 127/222 (58%), Positives = 172/222 (78%), Gaps = 5/222 (2%)

Query  25   AAISMDRTRIIFEGMQKSVSLNVANNNKQLPYLAQGWIENEKGEKI-TSPLIVLPPIQRI  83
            AA+S+DRTR +F+G +KS++L+++N+NKQLPYLAQ+WIENE+ EKI T+P+I  PP+QR+
Sbjct  26   AAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL  85

Query  84   EPAKSSQVKIEALPAINSLPQDRESLFYFNLREIPPKSDKPNTLQIALQTRVKLFYRPKA  143
            EP+  S V++ + P I+ LPQDRESLFYFNLREIPP+S+K+N LQIALQT++KLFYRP A
Sbjct  86   EPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAA  145

Query  144  IISGPNTVPWQQKLTLLKEGNSVTINNPTPYYVTVIEAGESNQSAPIKDFKPIMLAPFSE  203
            I + PN V WQ++L L K + +  I+NPTPYYVTVI  G S++ A   +F  +ML+P SE
Sbjct  146  IKTRPNEV-WQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSE  204

Query  204  QNLGVNSHQLGNTPVLTYVNDYGGRPNLTFSCQGSTCHVDPD  245
            Q +   +    NTP L+Y+NDYGGRP L+F C+GS C V  +
Sbjct  205  QTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKE  243

42) S70_08130 in NC_017731


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  225 bits (837),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 111/220 (51%), Positives = 173/220 (79%), Gaps = 0/220 (0%)

Query  25   AHSAVTLDRTRIVFPGDERAINIRITNDNPEEVYLAQSWIEDLQGNKLTKGAILATPPLQ  84
            A++AV+LDRTR VF G E+++ + I+NDN +  YLAQ+WIE+ + +K+  G+++ATPP+Q
Sbjct  24   ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQ  83

Query  85   RIEPNSDSLVRLSVTPLLEQLPQDRESVFYFNLREVPPKSTEGNTLQIALQSRVKLFYRP  144
            R+EP + S+VRLS TP + +LPQDRES+FYFNLRE+PP+S  +N LQIALQ+++KLFYRP
Sbjct  84   RLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRP  143

Query  145  KNILSESQTQWAHKITLARTAKGYQLNNHTPFHLTVIGLGNSKSQSEQSRFDVVMVPPKS  204
              I + ++  W +++ L + + GY+++N TP+ +TVIGLG S  Q+E++ F+ VM++P+S
Sbjct  144  AAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRS  203

Query  205  THDIISPSLSTPYLTYINDYGGKPTLAFRCIDAICTVREE  244
             + + S++ +TPYL+YINDYGG+P L+F C ++ C+V+ E
Sbjct  204  EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE  243

43) yfcS1 in NC_021591


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  223 bits (829),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 117/217 (54%), Positives = 165/217 (77%), Gaps = 7/217 (3%)

Query  27   IALDRTRVIFSGGDKSVSMSISNENKQLPYLAQGWIEDANGKKI-TSPLTVLPPVQRLEP  85
            ++LDRTR +F G++KS+++ ISN+NKQLPYLAQ+WIE+ N  KI T+P+   PPVQRLEP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   GAKSQVKVQGLPAANTLPQDRETLFYFNLREIPPKSDKPNTLQLALQTRIKLFYRPKAIA  145
            GAKS V++   P  + LPQDRE+LFYFNLREIPP+S+K+N LQ+ALQT+IKLFYRP AI 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  IANPEASAPWQEKLTLTKQGDSYQVNNPTPYYVTLVDASSKKDGASAPGFEPLMVAPKDS  205
              +  ++  WQ++L L K +++Y+++NPTPYYVT+++ ++    A    FE +M++P+  
Sbjct  147  --KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSE  204

Query  206  ASLKVAASALGNAPVLTYVNDYGGRPQLSFNCNGASC  242
             ++K A     N+P L+Y+NDYGGRP LSF CNG+ C
Sbjct  205  QTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRC  238

44) PFLU1094 in NC_012660


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  223 bits (831),  Expect = 7e-60, Method: Compositional matrix adjust.
 Identities = 121/246 (50%), Positives = 180/246 (74%), Gaps = 10/246 (4%)

Query  3    LNTRRLFQAFALLVLGLSQSTHAAVGLDRTRVIFDGGKEATSVNITNNNTQLPYLAQGWI  62
            +  + L  A++L+V++   +++AAV+LDRTR +FDG+  + +++I+N+N QLPYLAQ+WI
Sbjct  7    IRKKILMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWI  63

Query  63   EDEDGKKI-TTPLIVLPPVQRLEPGKQSQVKVQALPAAKMLPQDRETVFYFNLREIPPRS  121
            E+E+  KI T P+I  PPVQRLEPG +S V++ + P    LPQDRE++FYFNLREIPPRS
Sbjct  64   ENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRS  123

Query  122  DKANTLQIALQTRIKLFYRPQAIAPSQQDLSNPWQEKLTLTREGEHYKVNNPTPYYVTLV  181
            +KAN LQIALQT+IKLFYRP AI    +++   WQ++L L + +  Y+++NPTPYYVT++
Sbjct  124  EKANVLQIALQTKIKLFYRPAAIKTRPNEV---WQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  182  DARSSKDGKTVPGFEPLMVPPKGALALGPTAKALGTTPYLSYVNDYGGRPVLAFTCSGDI  241
            +  +S        FE +M++P++  ++ ++      TPYLSY+NDYGGRPVL+F C+G  
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSR  237

Query  242  CKVNTQ  247
            C V+ +
Sbjct  238  CSVKKE  243

45) M621_05730 in NC_021659


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  223 bits (829),  Expect = 9e-60, Method: Compositional matrix adjust.
 Identities = 117/217 (54%), Positives = 165/217 (77%), Gaps = 7/217 (3%)

Query  27   IALDRTRVIFSGGDKSVSMSISNENKQLPYLAQGWIEDANGKKI-TSPLTVLPPVQRLEP  85
            ++LDRTR +F G++KS+++ ISN+NKQLPYLAQ+WIE+ N  KI T+P+   PPVQRLEP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   GAKSQVKVQGLPAANTLPQDRETLFYFNLREIPPKSDKPNTLQLALQTRIKLFYRPKAIA  145
            GAKS V++   P  + LPQDRE+LFYFNLREIPP+S+K+N LQ+ALQT+IKLFYRP AI 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  VANPEASAPWQEKLTLTKQGDSYQVNNPTPYYVTLVDASSKKDGASAPGFEPLMVAPKGS  205
              +  ++  WQ++L L K +++Y+++NPTPYYVT+++ ++    A    FE +M++P++ 
Sbjct  147  --KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSE  204

Query  206  APLKVAASALGNAPVLTYINDYGGRPQLTFSCNGASC  242
              +K A     N+P L+YINDYGGRP L+F CNG+ C
Sbjct  205  QTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRC  238

46) SerAS12_4769 in NC_015566


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  222 bits (828),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 119/218 (55%), Positives = 174/218 (80%), Gaps = 6/218 (2%)

Query  29   ISLDRTRAVYLSDAKSISLNIVNENKELPFLAQSWLENEQHQKI-TSPLVVLPPLQRVEA  87
            +SLDRTRAV+ +  KS++L+I N+NK+LP+LAQ+W+ENE+++KI T+P++  PP+QR+E+
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  88   GERSVVRITKTPEADRLPQDRESVFYFNLREIPPKSSKTNVMQLALQTQIKLFYRPKAIV  147
            G +S+VR++ TP+  +LPQDRES+FYFNLREIPP+S K+NV+Q+ALQT+IKLFYRP AI 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  148  APKGEVWQEKLVFRKNAGGFTIENPTPFYITLTGMTRQPQKQGGGALGDFQPVMLKPKSS  207
            +   EVWQ++L++ K +GG+ IENPTP+Y+T+ G+   ++KQ+    G+F+ VML P+S 
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG-GSEKQAEE--GEFETVMLSPRSE  204

Query  208  ESVKLRDNGLNSFVVTYINDYGGHPELRFACNGSVCHV  245
            ++VK      N+  ++YINDYGG+P L F CNGS C V
Sbjct  205  QTVK--SANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

47) SerAS13_4769 in NC_017573


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  222 bits (828),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 119/218 (55%), Positives = 174/218 (80%), Gaps = 6/218 (2%)

Query  29   ISLDRTRAVYLSDAKSISLNIVNENKELPFLAQSWLENEQHQKI-TSPLVVLPPLQRVEA  87
            +SLDRTRAV+ +  KS++L+I N+NK+LP+LAQ+W+ENE+++KI T+P++  PP+QR+E+
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  88   GERSVVRITKTPEADRLPQDRESVFYFNLREIPPKSSKTNVMQLALQTQIKLFYRPKAIV  147
            G +S+VR++ TP+  +LPQDRES+FYFNLREIPP+S K+NV+Q+ALQT+IKLFYRP AI 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  148  APKGEVWQEKLVFRKNAGGFTIENPTPFYITLTGMTRQPQKQGGGALGDFQPVMLKPKSS  207
            +   EVWQ++L++ K +GG+ IENPTP+Y+T+ G+   ++KQ+    G+F+ VML P+S 
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG-GSEKQAEE--GEFETVMLSPRSE  204

Query  208  ESVKLRDNGLNSFVVTYINDYGGHPELRFACNGSVCHV  245
            ++VK      N+  ++YINDYGG+P L F CNGS C V
Sbjct  205  QTVK--SANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

48) SerAS9_4768 in NC_015567


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  222 bits (828),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 119/218 (55%), Positives = 174/218 (80%), Gaps = 6/218 (2%)

Query  29   ISLDRTRAVYLSDAKSISLNIVNENKELPFLAQSWLENEQHQKI-TSPLVVLPPLQRVEA  87
            +SLDRTRAV+ +  KS++L+I N+NK+LP+LAQ+W+ENE+++KI T+P++  PP+QR+E+
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  88   GERSVVRITKTPEADRLPQDRESVFYFNLREIPPKSSKTNVMQLALQTQIKLFYRPKAIV  147
            G +S+VR++ TP+  +LPQDRES+FYFNLREIPP+S K+NV+Q+ALQT+IKLFYRP AI 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  148  APKGEVWQEKLVFRKNAGGFTIENPTPFYITLTGMTRQPQKQGGGALGDFQPVMLKPKSS  207
            +   EVWQ++L++ K +GG+ IENPTP+Y+T+ G+   ++KQ+    G+F+ VML P+S 
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG-GSEKQAEE--GEFETVMLSPRSE  204

Query  208  ESVKLRDNGLNSFVVTYINDYGGHPELRFACNGSVCHV  245
            ++VK      N+  ++YINDYGG+P L F CNGS C V
Sbjct  205  QTVK--SANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

49) M621_06740 in NC_021659


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  222 bits (828),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 117/217 (54%), Positives = 165/217 (77%), Gaps = 7/217 (3%)

Query  27   IALDRTRVIFSGGDKSVSMSISNENKQLPYLAQGWIEDANGKKI-TSPLAVLPPVQRLEP  85
            ++LDRTR +F G++KS+++ ISN+NKQLPYLAQ+WIE+ N  KI T+P+   PPVQRLEP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   GAKSQVKVQGLPAANTLPQDRETLFYFNLREIPPKSDKPNTLQLALQTRIKLFYRPKAIA  145
            GAKS V++   P  + LPQDRE+LFYFNLREIPP+S+K+N LQ+ALQT+IKLFYRP AI 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  VANPEASAPWQEKLTLTKQGDSYQVNNPTPYYVTLVDASSKKDGASAPGFEPLMVAPKGS  205
              +  ++  WQ++L L K +++Y+++NPTPYYVT+++ ++    A    FE +M++P++ 
Sbjct  147  --KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSE  204

Query  206  APLKVAASALGNAPVLTYVNDYGGRPQLSFNCNGASC  242
              +K A     N+P L+Y+NDYGGRP LSF CNG+ C
Sbjct  205  QTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRC  238

50) mrpD in NC_022000


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  222 bits (827),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 125/247 (51%), Positives = 193/247 (79%), Gaps = 12/247 (4%)

Query  1    MMLLKRSCIVATTLLMGMAFTHQAVAAIALDRTRVIFNGAEKSISLNVSNQNKDLPYLAQ  60
            + ++++  ++A+  L  ++    A AA++LDRTR +F+G+EKS++L++SN+NK+LPYLAQ
Sbjct  4    LSMIRKKILMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   GWMENENGERI-ESPLIVLPPIQRIEPGDKSQIKVQSLPDIAKLPQDRESVFYFNLREIP  119
            +W+ENEN E+I  +P+I  PP+QR+EPG KS +++ + PDI+KLPQDRES+FYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PRSNKPNVLQIALQTRIKLFYRPASIYASQTDLTNPWQEQITLTKKGDRFEVNNPTPYYV  179
            PRS+K+NVLQIALQT+IKLFYRPA+I +   ++   WQ+Q+ L K ++ + ++NPTPYYV
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV---WQDQLILNKVSGGYRIENPTPYYV  177

Query  180  TLVDGLTSLKGKSLDG-FEPLMIAPKSSGTINLSASMFGASPVLSYINDYGGRPQMKFTC  238
            T++ GL +   ++ +G FE +M++P+S  T++  ++ +  +P LSYINDYGGRP + F C
Sbjct  178  TVI-GLGGSEKQAEEGEFETVMLSPRSEQTVK--SANYN-TPYLSYINDYGGRPVLSFIC  233

Query  239  SGNQCKV  245
            +G++C V
Sbjct  234  NGSRCSV  240

51) mrpD in NC_010554


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  222 bits (827),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 125/247 (51%), Positives = 193/247 (79%), Gaps = 12/247 (4%)

Query  1    MMLLKRSCIVATTLLMGMAFTHQAVAAIALDRTRVIFNGAEKSISLNVSNQNKDLPYLAQ  60
            + ++++  ++A+  L  ++    A AA++LDRTR +F+G+EKS++L++SN+NK+LPYLAQ
Sbjct  4    LSMIRKKILMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   GWMENENGERI-ESPLIVLPPIQRIEPGDKSQIKVQSLPDIAKLPQDRESVFYFNLREIP  119
            +W+ENEN E+I  +P+I  PP+QR+EPG KS +++ + PDI+KLPQDRES+FYFNLREIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PRSNKPNVLQIALQTRIKLFYRPASIYASQTDLTNPWQEQITLTKKGDRFEVNNPTPYYV  179
            PRS+K+NVLQIALQT+IKLFYRPA+I +   ++   WQ+Q+ L K ++ + ++NPTPYYV
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV---WQDQLILNKVSGGYRIENPTPYYV  177

Query  180  TLVDGLTSLKGKSLDG-FEPLMIAPKSSGTINLSASMFGASPVLSYINDYGGRPQMKFTC  238
            T++ GL +   ++ +G FE +M++P+S  T++  ++ +  +P LSYINDYGGRP + F C
Sbjct  178  TVI-GLGGSEKQAEEGEFETVMLSPRSEQTVK--SANYN-TPYLSYINDYGGRPVLSFIC  233

Query  239  SGNQCKV  245
            +G++C V
Sbjct  234  NGSRCSV  240

52) SMWW4_v1c46270 in NC_020211


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  222 bits (826),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 117/228 (52%), Positives = 181/228 (80%), Gaps = 6/228 (2%)

Query  21   PTADAAISLDRTRAVYVSDAKSISLNIVNENKELPFLAQSWLENEQHQKI-TSPLVVLPP  79
            + ADAA+SLDRTRAV+ +  KS++L+I N+NK+LP+LAQ+W+ENE+++KI T+P++  PP
Sbjct  22   SGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPP  81

Query  80   LQRVEPSERSVVRITKTPEADRLPQDRESVFYFNLREIPPKSTKTNVMQLALQTQIKLFY  139
            +QR+EP+ +S+VR++ TP+  +LPQDRES+FYFNLREIPP+S K+NV+Q+ALQT+IKLFY
Sbjct  82   VQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFY  141

Query  140  RPKAIVAPKGEVWQEKLVFRKSGSAITVDNPTPFYITLTGMTRQTQKQGGGAIGGFQPLM  199
            RP AI +   EVWQ++L++ K +++  ++NPTP+Y+T+ G+   ++KQ+    G F+ +M
Sbjct  142  RPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG-GSEKQAEE--GEFETVM  198

Query  200  LKPKSSESLKLHDTGMNSFVITYINDYGGHPELRFVCNGGVCTAVPEK  247
            L P+S +++K   +  N+  ++YINDYGG+P L F+CNG+ C+   EK
Sbjct  199  LSPRSEQTVK--SANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

53) Spro_4674 in NC_009832


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  220 bits (819),  Expect = 6e-59, Method: Compositional matrix adjust.
 Identities = 114/218 (53%), Positives = 174/218 (80%), Gaps = 6/218 (2%)

Query  28   ISLDRTRAVYLSDAKSISLNIVNENKELPFLAQSWLENEQHQKV-TSPLVVLPPLQRVEA  86
            +SLDRTRAV+ +  KS++L+I N+NK+LP+LAQ+W+ENE+++K+ T+P++  PP+QR+E+
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  87   SERSVVRITKTPEADRLPQDRESVFYFNLREIPPKSSKTNVMQLALQTQIKLFYRPKAIV  146
            + +S+VR++ TP+  +LPQDRES+FYFNLREIPP+S K+NV+Q+ALQT+IKLFYRP AI 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  147  APKGEVWQEKLVFHKSAGGFTVENPTPFYITLTGMTRQTQKQGGGALAGFQPVMLKPKSS  206
            +   EVWQ++L+++K +GG+ +ENPTP+Y+T+ G+   ++KQ+    + F+ VML P+S 
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG-GSEKQAEE--GEFETVMLSPRSE  204

Query  207  EPLKLSDTGFNGFVVSYINDYGGHPELRFACNGSVCNA  244
            + +K   + +N   +SYINDYGG+P L F CNGS C+ 
Sbjct  205  QTVK--SANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

54) CSSP291_01040 in NC_020260


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  220 bits (818),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 124/245 (51%), Positives = 186/245 (76%), Gaps = 12/245 (4%)

Query  4    MNKTIFAAALALSGVMATQQAFAAIALDRTRVVYNGEEKSISLSISNENKNLPYLAQAWI  63
            + K I+ AA++L  + +++   AA++LDRTR V++G EKS++L ISN+NK+LPYLAQAWI
Sbjct  7    IRKKILMAAIPLFVISGAD---AAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWI  63

Query  64   EDAQGNKI-TSPLNVLPPVQRVEAGAKSQVKVQASPAIASLPQDRETLFYFNLREIPPRS  122
            E+ + +KI T+P+   PPVQR+E+GAKS V++ ++P I+ LPQDRE+LFYFNLREIPPRS
Sbjct  64   ENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRS  123

Query  123  NKPNTLQIALQTRIKLFYRPKAIALDKTQAAQGDWVEKVTLTRQGDKFMVNNPTPYFLTI  182
            +K+N LQIALQT+IKLFYRP AI   KT++ +  W +++ L + ++ + ++NPTPY++T+
Sbjct  124  EKANVLQIALQTKIKLFYRPAAI---KTRPNEV-WQDQLILNKVSGGYRIENPTPYYVTV  179

Query  183  VE-GATGVKGKTVGFEPVMVSPKSSATIEASAAAFGNNPVLTYVNDYGGRPHLQFACSGT  241
            +  G++  ++    FE VM+SP+S  T+   +A + N P L+Y+NDYGGRP L F C+G+
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTV--KSANY-NTPYLSYINDYGGRPVLSFICNGS  236

Query  242  TCTAK  246
             C+ K
Sbjct  237  RCSVK  241

55) XBJ1_3536 in NC_013892


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  219 bits (815),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 117/223 (53%), Positives = 168/223 (76%), Gaps = 7/223 (3%)

Query  18   AAMALDRTRVIFNGDVKSVSLNIENQHVDLPYLAQAWIEDDKGNKI-NGPLVVVPPVQRV  76
            AA++LDRTR +F+G  KS++L+I N++ +LPYLAQAWIE+++ +KI  GP++  PPVQR+
Sbjct  26   AAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL  85

Query  77   EAGAKSQVKIQTLPTIAELPQDRESLFYFNLREIPPRSNKPNVLQIALQTRVKLFYRPEA  136
            E+GAKS V++ T P I+ LPQDRESLFYFNLREIPPRS+K+NVLQIALQT++KLFYRP A
Sbjct  86   EPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAA  145

Query  137  VVARRIDLDNPWQEKLTLTRQGNQYLVNNPTSYYVTISEASNKVNGKNIDGFQPLMLAPR  196
            + +R  ++   WQ++L L + +  Y ++NPT+YYVT+   +   +  + + F+ +ML+PR
Sbjct  146  IKTRPNEV---WQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPR  202

Query  197  SSEKLGADLSALGNKPVLTYVNDYGGRPQLTFSCNGDTCTVAK  239
            S + + +      N P L+Y+NDYGGRP L+F CNG  C+V K
Sbjct  203  SEQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKK  242

56) mrxD in NC_014228


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  219 bits (816),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 121/245 (50%), Positives = 180/245 (74%), Gaps = 13/245 (5%)

Query  4    KKFLMTTAIALTGLMSVHQAMAAITLDRTRVIFNGDVKSVSLNIENQHQDLPYLAQSWIE  63
            KK+LM++      L  +  A AA++LDRTR +F+G  KS++L+I N++++LPYLAQ+WIE
Sbjct  9    KKILMAA----IPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIE  64

Query  64   DEKGNKI-NSPLVVVPPVQRVEAGSKSQIKIQTLPAIAQLPQDRESLFYFNVREIPPRSE  122
            +E+ +KI  +P++  PPVQR+E+G+KS +++ T P I++LPQDRESLFYFN+REIPPRSE
Sbjct  65   NENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSE  124

Query  123  KPNVLQLALQTRIKLFYRPEAVIARRVDLDNPWQEKLTLTREGNHYLVNNPTPYYITLSE  182
            K+NVLQ+ALQT+IKLFYRP A+ +R  ++   WQ++L L + +  Y ++NPTPYY+T+  
Sbjct  125  KANVLQIALQTKIKLFYRPAAIKTRPNEV---WQDQLILNKVSGGYRIENPTPYYVTVIG  181

Query  183  ASNKLEGQSVEGFQPLMLAPKSSEKPGGTVNSLG-NTPVLTYVNDYGGHPQLIFSCSGNT  241
             +          F+ +ML+P+S +    TV+S   NTP L+Y+NDYGG+P L F C+G+ 
Sbjct  182  LGGSEKQAEEGEFETVMLSPRSEQ----TVKSANYNTPYLSYINDYGGRPVLSFICNGSR  237

Query  242  CTVAK  246
            C+V K
Sbjct  238  CSVKK  242

57) YE105_C0728 in NC_015224


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  219 bits (814),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 112/231 (49%), Positives = 178/231 (78%), Gaps = 7/231 (3%)

Query  50   VAALMTQQATAAIALDRTRAILNGGDKSISLNISNQNKELPYLAQGWIEDEQGNKI-NSP  108
            ++ ++   A AA++LDRTRA+++G++KS++L+ISN+NK+LPYLAQ+WIE+E+ +KI  +P
Sbjct  16   IPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGP  75

Query  109  LTVVPPVQRVEPGAMSQLKIQSLPAVNQLAQDRETLFYFNLREIPPRSDKPNTLQIALQT  168
            +   PPVQR+EPGA S +++ + P +++L+QDRE+LFYFNLREIPPRS+K+N LQIALQT
Sbjct  76   VIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQT  135

Query  169  RIKLFYRPAGIVPQKADMSTPWQEKLQLTRQGDRYQVNNPTPYYITLVDASESKTGKTAA  228
            +IKLFYRPA+I  +  ++   WQ++L L + ++ Y+++NPTPYY+T+++ + S      +
Sbjct  136  KIKLFYRPAAIKTRPNEV---WQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEG  192

Query  229  GFKPLMIAPKAQGILDVSAAALGSKPVLTYVNDFGGRPKLIFGCSGGTCSV  279
             F  +M++P+++    V +A   + P L+Y+ND+GGRP L F C+G+ CSV
Sbjct  193  EFETVMLSPRSEQ--TVKSANYNT-PYLSYINDYGGRPVLSFICNGSRCSV  240

58) Y11_22641 in NC_017564


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  219 bits (814),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 112/231 (49%), Positives = 178/231 (78%), Gaps = 7/231 (3%)

Query  50   VAALMTQQATAAIALDRTRAILNGGDKSISLNISNQNKELPYLAQGWIEDEQGNKI-NSP  108
            ++ ++   A AA++LDRTRA+++G++KS++L+ISN+NK+LPYLAQ+WIE+E+ +KI  +P
Sbjct  16   IPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGP  75

Query  109  LTVVPPVQRVEPGAMSQLKIQSLPAVNQLAQDRETLFYFNLREIPPRSDKPNTLQIALQT  168
            +   PPVQR+EPGA S +++ + P +++L+QDRE+LFYFNLREIPPRS+K+N LQIALQT
Sbjct  76   VIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQT  135

Query  169  RIKLFYRPAGIVPQKADMSTPWQEKLQLTRQGDRYQVNNPTPYYITLVDASESKTGKTAA  228
            +IKLFYRPA+I  +  ++   WQ++L L + ++ Y+++NPTPYY+T+++ + S      +
Sbjct  136  KIKLFYRPAAIKTRPNEV---WQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEG  192

Query  229  GFKPLMIAPKAQGILDVSAAALGSKPVLTYVNDFGGRPKLIFGCSGGTCSV  279
             F  +M++P+++    V +A   + P L+Y+ND+GGRP L F C+G+ CSV
Sbjct  193  EFETVMLSPRSEQ--TVKSANYNT-PYLSYINDYGGRPVLSFICNGSRCSV  240

59) mrpD in NC_022000


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  219 bits (817),  Expect = 9e-59, Method: Compositional matrix adjust.
 Identities = 126/246 (52%), Positives = 185/246 (76%), Gaps = 13/246 (5%)

Query  2    MASKHLFMVTTTLLTGMVFTSQVGATIALDRTRIIFNGADKSVSLSISNQNKELPYLAQG  61
            M  K ++M +  L+      S  +A+++LDRTR +F+G++KS++L ISN+NK+LPYLAQ+
Sbjct  6    MIRKKILMAAIPLFV----ISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQA  61

Query  62   WLENEQGEKIET-PLIVLPPIQRIEPGNKSQVKVQSLPDIAQLPQDRESVFYFNLREIPP  120
            W+ENE+ EKI T P+I  PP+QR+EPG KS V++ + PDI++LPQDRES+FYFNLREIPP
Sbjct  62   WIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPP  121

Query  121  RSDKPNVLQIALQTRIKLFYRPKSIYATQTDLSNPWQEKITLTKQGESYVVHNPTPYYIT  180
            RS+K+NVLQIALQT+IKLFYRP +I +   ++   WQ+++ L K + +Y ++NPTPYY+T
Sbjct  122  RSEKANVLQIALQTKIKLFYRPAAIKTRPNEV---WQDQLILNKVSGGYRIENPTPYYVT  178

Query  181  IVDGLTDLKGKSLEG-FTPIMVAPRGQEKLNLTVSTLGASPVLSYINDYGGRPRLKFSCN  239
            ++ GL +   ++ EG F  +M++PR+++ ++   S+   +P LSYINDYGGRP L F CN
Sbjct  179  VI-GLGGSEKQAEEGEFETVMLSPRSEQTVK---SANYNTPYLSYINDYGGRPVLSFICN  234

Query  240  SRECKV  245
            +  C V
Sbjct  235  GSRCSV  240

60) papD in NC_021591


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  218 bits (811),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 114/215 (54%), Positives = 173/215 (81%), Gaps = 6/215 (2%)

Query  29   DRTRAIYVGDAKSISLNIVNENKELPFLAQSWLENEQHQKI-TSPLVVLPPLQRVEAGER  87
            DRTRA++ G  KS++L+I N+NK+LP+LAQ+W+ENE+++KI T+P++  PP+QR+E+G +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  88   SVVRITKTPEADRLPQDRESVFYFNLREIPPKSSKTNVMQLALQTQIKLFYRPKAIVAPK  147
            S+VR++ TP+  +LPQDRES+FYFNLREIPP+S K+NV+Q+ALQT+IKLFYRP AI +  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP  150

Query  148  GEVWQEKLVFRKSAGGFTIENPTPFYITLTGITRQPQKQGGGAINDFEPVMLKPKSSESV  207
             EVWQ++L++ K +GG+ IENPTP+Y+T+ G+   ++KQ+  +  +FE VML P+S ++V
Sbjct  151  NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG-GSEKQAEEG--EFETVMLSPRSEQTV  207

Query  208  KLRDNGLSSFVVTYINDYGGHPELRFQCNGTLCTA  242
            K  +   +++ ++YINDYGG+P L F CNG+ C+ 
Sbjct  208  KSANYN-TPY-LSYINDYGGRPVLSFICNGSRCSV  240

61) mrfD in NC_014121


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  218 bits (812),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 115/248 (47%), Positives = 184/248 (75%), Gaps = 9/248 (3%)

Query  1    MTIVRISAL-TGLALMVSGVATAAISLDRTRVIFDGAAKSVSLRLTNENKTLPYLAQGWV  59
            ++++R   L ++++L V + A AA+SLDRTR +FDG+ KS++L ++N+NK LPYLAQ+W+
Sbjct  4    LSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWI  63

Query  60   E-DAQGKKITDPLVLLPPVQRIEPGEQSQIKVQSTAGIQRLPQDRESLFYFNLREIPPKS  118
            E + Q K IT+P++  PPVQR+EPG +S +++ +T++I +LPQDRESLFYFNLREIPP+S
Sbjct  64   ENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRS  123

Query  119  SKPNTLQLALQTRIKLFYRPAAIEVQRADYSTPFQEQLTLTRVGDKYRVNNPTPYYISLV  178
             K+N LQ+ALQT+IKLFYRPAAI  +  +     Q+QL L +V++ YR++NPTPYY++++
Sbjct  124  EKANVLQIALQTKIKLFYRPAAIKTRPNE---VWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  179  NASSTLTGKAAAGFKPIMVEPKGQLVLTPSAAALGSAPVLTYVNDFGGRAKLIFSCGGNE  238
              +++      + F  +M+ P+++  + ++     ++P L+Y+ND+GGR+ L F C G+ 
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSR  237

Query  239  CKAVPQEK  246
            C +V +EK
Sbjct  238  C-SVKKEK  244

62) M621_24360 in NC_021659


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  218 bits (811),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 114/215 (54%), Positives = 173/215 (81%), Gaps = 6/215 (2%)

Query  27   DRTRAIYVGDAKSISLNIVNENKELPFLAQSWLENEQHQKI-TSPLVVLPPLQRVEAGER  85
            DRTRA++ G  KS++L+I N+NK+LP+LAQ+W+ENE+++KI T+P++  PP+QR+E+G +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  86   SVVRITKTPEADRLPQDRESVFYFNLREIPPKSSKTNVMQLALQTQIKLFYRPKAIVAPK  145
            S+VR++ TP+  +LPQDRES+FYFNLREIPP+S K+NV+Q+ALQT+IKLFYRP AI +  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP  150

Query  146  GEVWQEKLVFRKSAGGFTIENPTPFYITLTGITRQPQKQGGGAINDFEPVMLKPKSSESV  205
             EVWQ++L++ K +GG+ IENPTP+Y+T+ G+   ++KQ+  +  +FE VML P+S ++V
Sbjct  151  NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG-GSEKQAEEG--EFETVMLSPRSEQTV  207

Query  206  KLRDNGLSSFVVTYINDYGGHPELRFQCNGTLCTA  240
            K  +   +++ ++YINDYGG+P L F CNG+ C+ 
Sbjct  208  KSANYN-TPY-LSYINDYGGRPVLSFICNGSRCSV  240

63) PANA5342_3207 in NC_016816


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  218 bits (810),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 115/219 (53%), Positives = 171/219 (79%), Gaps = 1/219 (0%)

Query  27   SAVSLDRTRAVFNGTEKNLIVNITNDSTKKPYLAQAWLEDAKGKKL-TDYFMVTPPMQRL  85
            +AVSLDRTRAVF+G+EK++ ++I+ND+ + PYLAQAW+E+ +  K+ T+  + TPP+QRL
Sbjct  26   AAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL  85

Query  86   EPSQKSVIRITSLPSVNTLPQDRESLFYFSVREVPPKSDHPNVLQLALQTKIKLFYRPAS  145
            EP+ KS++R+++ P ++ LPQDRESLFYF++RE+PP+S+ +NVLQ+ALQTKIKLFYRPA+
Sbjct  86   EPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAA  145

Query  146  IVAERFSQHDDQLVLHKISSGYKIDNISPYYMTVLGITGKPGQAVAKNFKPVMIAPKSSV  205
            I +      +DQL+L+K+S+GY+I+N +PYY+TV+G+ G   QA   +F  VM++P+S  
Sbjct  146  IKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ  205

Query  206  TVSSAIFPQPHVITINDFGGKPVVAYQCNGDICQPKAKK  244
            TV SA +  P +  IND+GG+PV+++ CNG  C  K  K
Sbjct  206  TVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

64) M495_23555 in NC_021741


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  218 bits (810),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 113/214 (53%), Positives = 171/214 (80%), Gaps = 6/214 (2%)

Query  32   DRTRAVYLSDAKSISLNIVNENKELPFLAQSWLENEQHQKI-TSPLVVLPPLQRVEANER  90
            DRTRAV+ +  KS++L+I N+NK+LP+LAQ+W+ENE+++KI T+P++  PP+QR+E+  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  91   SVVRITKTPEADRLPQDRESVFYFNLREIPPKSSKTNVMQLALQTQIKLFYRPKAIVAPK  150
            S+VR++ TP+  +LPQDRES+FYFNLREIPP+S K+NV+Q+ALQT+IKLFYRP AI +  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP  150

Query  151  GEVWQEKLVFRKSTGGFTVENPTPFYITLTGMTRQTQKQGGGALGDFQPVMLKPKSSETI  210
             EVWQ++L++ K +GG+ +ENPTP+Y+T+ G+   ++KQ+    G+F+ VML P+S +T+
Sbjct  151  NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG-GSEKQAEE--GEFETVMLSPRSEQTV  207

Query  211  KVRDNGLNSFVITYINDYGGHPELRFACNGSVCN  244
            K  +    ++ ++YINDYGG+P L F CNGS C+
Sbjct  208  KSANYN-TPY-LSYINDYGGRPVLSFICNGSRCS  239

65) S70_13120 in NC_017731


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  218 bits (812),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 117/231 (51%), Positives = 175/231 (76%), Gaps = 7/231 (3%)

Query  28   TLSSAQAAIALDRTRAIMTGEDKSISLNISNENKQLPYLAQGWIENAQGEKI-TEPFTVL  86
             +S+A+AA++LDRTRA+  G +KS++L+ISN+NKQLPYLAQ+WIEN + EKI T P    
Sbjct  20   VISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIAT  79

Query  87   PPVQRVEPGAKSQVKIQALPSVASLPQDRESVYYFNLREIPPKSDKPNTLQLALQTRIKL  146
            PPVQR+EPGAKS V++ + P ++ LPQDRES++YFNLREIPP+S+K+N LQ+ALQT+IKL
Sbjct  80   PPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKL  139

Query  147  FYRPKAIIPTRQQMENPWQEKITLTRQGDQYSVENPTPYFVTLVDAASVKDGKTVAGFEP  206
            FYRP AI   + + ++ WQ+++ L + ++ Y +ENPTPY+VT+++ ++       + FE 
Sbjct  140  FYRPAAI---KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFET  196

Query  207  LMVAPKSSLLMGGSAKALGSKPVLTYINDYGGRPTLTFTCQDNRCHVVSDK  257
            +M++P+S   + ++     + P L+YINDYGGRP L+F C+++RC V  +K
Sbjct  197  VMLSPRSEQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

66) plu0415 in NC_005126


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  218 bits (810),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 123/253 (49%), Positives = 185/253 (74%), Gaps = 15/253 (5%)

Query  1    MSMTMKKNAAASAVMLAGI--LAVQQANAAIALDRTRAVFNGEDRSMSLSISNQNKELPY  58
            +SM  KK      +++A+I  + +  A+AA++LDRTRAVF+G ++SM+L ISN+NK+LPY
Sbjct  4    LSMIRKK------ILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPY  57

Query  59   LAQAWIEDEHGNKINT-PLTALPPLQRVEPGAKSQVKLQVTQGINMLSQDKETLFYFNLR  117
            LAQAWIE+E+ +KI T P+ A PP+QR+EPGAKS V+L  T +I+ L+QD+E+LFYFNLR
Sbjct  58   LAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLR  117

Query  118  EIPPKSNKPNTLQIALQTRIKLFYRPKAITVGRTDYENPYQEKLTMTRQGDRYVVNNPTP  177
            EIPP+S+K+N LQIALQT+IKLFYRP AI     +     Q++L + + ++ Y ++NPTP
Sbjct  118  EIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNE---VWQDQLILNKVSGGYRIENPTP  174

Query  178  YYVTIASASSSLNGTAVSGFNPMMIPPKGSAVLGGSASAMGNNPVLIFINDFGGRPKLVF  237
            YYVT+ + ++S + +  + F+ +M++P++   + ++     N P L +IND+GGRP L F
Sbjct  175  YYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANY---NTPYLSYINDYGGRPVLSF  231

Query  238  GCSGGTCTVKSSK  250
             C+G+ C+VK  K
Sbjct  232  ICNGSRCSVKKEK  244

67) mrfD in NC_008800


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  217 bits (809),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 113/231 (49%), Positives = 177/231 (77%), Gaps = 7/231 (3%)

Query  21   VTALMTQQATAAIALDRTRAILNGGDKSISLNISNQNKELPYLAQGWIEDEQGNKI-NSP  79
            +  ++   A AA++LDRTRA+++G++KS++L+ISN+NK+LPYLAQ+WIE+E+ +KI  +P
Sbjct  16   IPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGP  75

Query  80   LTVVPPVQRVEPGAMSQLKIQSLPAVNQLAQDRETLFYFNLREIPPRSDKPNTLQIALQT  139
            +   PPVQR+EPGA S +++ + P +++L+QDRE+LFYFNLREIPPRS+K+N LQIALQT
Sbjct  76   VIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQT  135

Query  140  RIKLFYRPAGIVPQKADMSTPWQEKLQLTRQGDRYQVNNPTPYYITLVDASESKTGKTAA  199
            +IKLFYRPA+I  +  ++   WQ++L L + ++ Y+++NPTPYY+T+++ + S      +
Sbjct  136  KIKLFYRPAAIKTRPNEV---WQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEG  192

Query  200  GFKPLMIAPKAQGMLDVSAAALGSKPVLTYVNDFGGRPKLIFGCSGSTCSV  250
             F  +M++P+++    V +A   + P L+Y+ND+GGRP L F C+GS CSV
Sbjct  193  EFETVMLSPRSEQ--TVKSANYNT-PYLSYINDYGGRPVLSFICNGSRCSV  240

68) mrfD in NC_010694


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  217 bits (808),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 118/226 (53%), Positives = 175/226 (78%), Gaps = 7/226 (3%)

Query  26   ASAAIALDRTRVIFNGGSHSMSVNISNQNRELPYLAQGWIEDDKGNKI-ESPLLILPPLQ  84
            A AA++LDRTR +F+G+  SM+++ISN+N++LPYLAQ+WIE+++ +KI  +P++  PP+Q
Sbjct  24   ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQ  83

Query  85   RVEPGAKSQVKIQGTPALNALPQDRESLFYFNLREIPPRSEKPNTLQIALQTRIKLFYRP  144
            R+EPGAKS V++  TP ++ LPQDRESLFYFNLREIPPRSEK+N LQIALQT+IKLFYRP
Sbjct  84   RLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRP  143

Query  145  ARLQAGQNEYNDPWQKKITLTREGDKYRLNNPTPYFVTLVAAETSQSGKDIASFNPLMVA  204
            A +++  NE    WQ ++ L + ++ YR++NPTPY+VT+++   S+   + + F+ +M++
Sbjct  144  AAIKTRPNE---VWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLS  200

Query  205  PKNSSLLTLSAETLGSTPVLTYINDFGGRPKLVFSCNGATCSVKEN  250
            P++    T+ +    +TP L+YIND+GGRP L F CNG+ CSVK +
Sbjct  201  PRSEQ--TVKSANY-NTPYLSYINDYGGRPVLSFICNGSRCSVKKE  243

69) Spro_4145 in NC_009832


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  217 bits (807),  Expect = 6e-58, Method: Compositional matrix adjust.
 Identities = 119/227 (53%), Positives = 174/227 (77%), Gaps = 7/227 (3%)

Query  23   ANAAISLDRTRIVFNGGEKSQSLTVSNQNKQLPYLAQGWIEDTQGNKIQT-PLTILPPVQ  81
            A+AA+SLDRTR VF+G+EKS +L +SN+NKQLPYLAQ+WIE+ + +KI T P+   PPVQ
Sbjct  24   ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQ  83

Query  82   RIEPGAQSQIKIQALPGANLLAQDRESLFYFNLREIPPKSDKPNTLQIALQTRIKLFYRP  141
            R+EPGA+S +++ + P+ + L+QDRESLFYFNLREIPP+S+K+N LQIALQT+IKLFYRP
Sbjct  84   RLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRP  143

Query  142  ASIVPTKTQMAAPWQEKLTLTRQGDSYQLNNPTPYFITLVDAGSKPNAEGVKGFEPVMVP  201
            A+I   KT+    WQ++L L + +++Y+++NPTPY++T+++ G+  +      FE VM++
Sbjct  144  AAI---KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLS  200

Query  202  PKGQAPLGVNAGVLGANPVLTYINDYGGRPQLKFTCSGTTCSATPVK  248
            P+++    V+++   + P L+YINDYGGRP L F C+G+ CS    K
Sbjct  201  PRSEQ--TVKSANYNT-PYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

70) H045_02410 in NC_020209


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  214 bits (795),  Expect = 4e-57, Method: Compositional matrix adjust.
 Identities = 113/218 (52%), Positives = 163/218 (75%), Gaps = 7/218 (3%)

Query  26   GLDRTRVIFDGGKEATSVNITNNNTQLPYLAQGWIEDESGKKI-TSPLIVLPPVQRLEPG  84
            +LDRTR +FDG+  + +++I+N+N QLPYLAQ+WIE+E+  KI T+P+I  PPVQRLEPG
Sbjct  29   SLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPG  88

Query  85   KQSQVKVQALPAAKSLPQDRETVYYFNLREIPPRSEKANTLQIALQTRIKLFYRPQAITP  144
             +S V++ + P    LPQDRE+++YFNLREIPPRSEKAN LQIALQT+IKLFYRP AI  
Sbjct  89   AKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKT  148

Query  145  SQQDFSNPWQQKLTLTREGEHYKVNNPTPYYVTLVDARSTKEGKTVAGFEPLMVPPKGAL  204
              ++    WQ++L L + +  Y+++NPTPYYVT+++  ++      + FE +M++P++  
Sbjct  149  RPNE---VWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ  205

Query  205  TLGPTIQALGKTPYLAYVNDYGGRPVLAFTCTGDTCTV  242
            T+ ++     +TPYL+Y+NDYGGRPVL+F C G  C+V
Sbjct  206  TVKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSV  240

71) S70_14365 in NC_017731


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  214 bits (795),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 120/224 (54%), Positives = 170/224 (76%), Gaps = 8/224 (3%)

Query  23   AHAAIGLDRTRVIFNGDQKSMSLNISNNNKQLPYLAQAWIDDAEGNKI-TSPLVVLPPVQ  81
            A+AA++LDRTR +F+G +KSM+L+ISN+NKQLPYLAQAWI++ + +KI T+P++  PPVQ
Sbjct  24   ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQ  83

Query  82   RVEPGKSSQVKIEALPAVSTLPQDRESLFYFNLREIPPKSDKPNTLQIALQTRVKMFYRP  141
            R+EPG  S V++ + P +S LPQDRESLFYFNLREIPP+S+K+N LQIALQT++K+FYRP
Sbjct  84   RLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRP  143

Query  142  KAIVPAKMGTPWQEKLTLQKQGDTVMVKNPTPYYVTVINAAESLKALDNKDKKEFKPIML  201
             AI  ++    WQ++L L+K ++   + NPTPYYVTVI  + S K   + +  EF  +ML
Sbjct  144  AAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEK---QAEEGEFETVML  199

Query  202  PPFGESALGVSANALGQRPVVTYINDYGGRPNLTFQCQGSQCHV  245
            +P +E ++  +     + P ++YINDYGGRP L+F C+GS+C V
Sbjct  200  SPRSEQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSV  240

72) papD in NC_017531


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  213 bits (791),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 117/208 (57%), Positives = 168/208 (81%), Gaps = 1/208 (0%)

Query  33   DRTRAIFNGGEKNLILNISNDNQKEPYLAQAWLEDAQGNKL-TNYLRVTPPVQRVEPGAK  91
            DRTRA+F+G+EK++ L+ISNDN++ PYLAQAW+E+ + +K+ T  +  TPPVQR+EPGAK
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   SVIRITALPSSASLPQDRESVFYFSVREIPPRSDRANVLQLALQTRIKLFYRPASITPER  151
            S++R+++ P  + LPQDRES+FYF++REIPPRS++ANVLQ+ALQT+IKLFYRPA+I    
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP  150

Query  152  FSRHDDQLVLHKVKGGFRVENPTPYYMTLLGIISKGNRAVEKSFVPVMIAPMSSETVKSS  211
                +DQL+L+KV GG+R+ENPTPYY+T++G+ +  ++A E  F  VM++P S +TVKS+
Sbjct  151  NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSA  210

Query  212  VSRDPQIITINDFGGKPVLPFLCQGSVC  239
                P +  IND+GG+PVL+F+C+GS C
Sbjct  211  NYNTPYLSYINDYGGRPVLSFICNGSRC  238

73) papD in NC_013956


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  213 bits (791),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 117/208 (57%), Positives = 168/208 (81%), Gaps = 1/208 (0%)

Query  33   DRTRAIFNGGEKNLILNISNDNQKEPYLAQAWLEDAQGNKL-TNYLRVTPPVQRVEPGAK  91
            DRTRA+F+G+EK++ L+ISNDN++ PYLAQAW+E+ + +K+ T  +  TPPVQR+EPGAK
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   SVIRITALPSSASLPQDRESVFYFSVREIPPRSDRANVLQLALQTRIKLFYRPASITPER  151
            S++R+++ P  + LPQDRES+FYF++REIPPRS++ANVLQ+ALQT+IKLFYRPA+I    
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP  150

Query  152  FSRHDDQLVLHKVKGGFRVENPTPYYMTLLGIISKGNRAVEKSFVPVMIAPMSSETVKSS  211
                +DQL+L+KV GG+R+ENPTPYY+T++G+ +  ++A E  F  VM++P S +TVKS+
Sbjct  151  NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSA  210

Query  212  VSRDPQIITINDFGGKPVLPFLCQGSVC  239
                P +  IND+GG+PVL+F+C+GS C
Sbjct  211  NYNTPYLSYINDYGGRPVLSFICNGSRC  238

74) PAGR_g1302 in NC_017554


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  213 bits (791),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 117/208 (57%), Positives = 168/208 (81%), Gaps = 1/208 (0%)

Query  33   DRTRAIFNGGEKNLILNISNDNQKEPYLAQAWLEDAQGNKL-TNYLRVTPPVQRVEPGAK  91
            DRTRA+F+G+EK++ L+ISNDN++ PYLAQAW+E+ + +K+ T  +  TPPVQR+EPGAK
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   SVIRITALPSSASLPQDRESVFYFSVREIPPRSDRANVLQLALQTRIKLFYRPASITPER  151
            S++R+++ P  + LPQDRES+FYF++REIPPRS++ANVLQ+ALQT+IKLFYRPA+I    
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP  150

Query  152  FSRHDDQLVLHKVKGGFRVENPTPYYMTLLGIISKGNRAVEKSFVPVMIAPMSSETVKSS  211
                +DQL+L+KV GG+R+ENPTPYY+T++G+ +  ++A E  F  VM++P S +TVKS+
Sbjct  151  NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSA  210

Query  212  VSRDPQIITINDFGGKPVLPFLCQGSVC  239
                P +  IND+GG+PVL+F+C+GS C
Sbjct  211  NYNTPYLSYINDYGGRPVLSFICNGSRC  238

75) RORB6_22395 in NC_021066


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  213 bits (791),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 115/242 (48%), Positives = 177/242 (74%), Gaps = 11/242 (4%)

Query  8    LVGIPLMISCMVQQASAAVSLDRTRVIFDGAAKSVSLRLTNENKTLPYLAQGWVE-DPQG  66
            + +IPL +   +  A AAVSLDRTR +FDG+ KS++L ++N+NK LPYLAQ+W+E + Q 
Sbjct  13   MAAIPLFV---ISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQE  69

Query  67   KKITDPLVLLPPVQRIEPGEQSQIKVQSTASIQRLPQDRESLFYFNLREIPPKSSKPNTL  126
            K IT+P++  PPVQR+EPG +S +++ +T+ I +LPQDRESLFYFNLREIPP+S K+N L
Sbjct  70   KIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVL  129

Query  127  QLALQTRIKLFYRPPAIEVKRADYATPFQEQLTLTREGDKYRVNNPTPYYISLVNASSTL  186
            Q+ALQT+IKLFYRP+AI  +  +     Q+QL L + ++ YR++NPTPYY++++  +++ 
Sbjct  130  QIALQTKIKLFYRPAAIKTRPNE---VWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSE  186

Query  187  AGKAAAGFKPIMVEPKGQLTLVPTASALGSVPVLTYVNDFGGRAKLVFSCGGSQCKAVPQ  246
                 + F  +M+ P+++ T+ ++     + P L+Y+ND+GGR+ L F C GS+C +V +
Sbjct  187  KQAEEGEFETVMLSPRSEQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRC-SVKK  242

Query  247  EK  248
            EK
Sbjct  243  EK  244

76) PANA5342_1329 in NC_016816


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  213 bits (791),  Expect = 9e-57, Method: Compositional matrix adjust.
 Identities = 117/211 (56%), Positives = 169/211 (81%), Gaps = 1/211 (0%)

Query  33   DRTRAIFNGGEKNLILNISNDNQKEPYLAQAWLEDAQGNKL-TNYLRVTPPVQRVEPGAK  91
            DRTRA+F+G+EK++ L+ISNDN++ PYLAQAW+E+ + +K+ T  +  TPPVQR+EPGAK
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   SVIRITALPSSASLPQDRESVFYFSVREIPPRSDRANVLQLALQTRIKLFYRPASITPER  151
            S++R+++ P  + LPQDRES+FYF++REIPPRS++ANVLQ+ALQT+IKLFYRPA+I    
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP  150

Query  152  FSRHDDQLVLHKVKGGFRVENPTPYYMTLLGIISKGNRAVEKSFVPVMIAPMSSETVKSS  211
                +DQL+L+KV GG+R+ENPTPYY+T++G+ +  ++A E  F  VM++P S +TVKS+
Sbjct  151  NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSA  210

Query  212  VSRDPQIITINDFGGKPVLPFLCQGSVCRAN  242
                P +  IND+GG+PVL+F+C+GS C  +
Sbjct  211  NYNTPYLSYINDYGGRPVLSFICNGSRCSVK  241

77) yfcS in NC_021591


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 116/220 (53%), Positives = 167/220 (76%), Gaps = 7/220 (3%)

Query  33   DRTRVIFDGGQNSVSLNISNQNKQLPYLAQAWLEDEQGNKIQT-PLVVLPPVQRVEPGKP  91
            DRTR +FDG+++S++L+ISN+NKQLPYLAQAW+E+E+ +KI T P++  PPVQR+EPG  
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   SQVKIQALPAAKQLPQDRETLYYFNLREIPPKSDKPNTLQIALQTRIKLFYRPAAITPTQ  151
            S V++ + P   +LPQDRE+L+YFNLREIPP+S+K+N LQIALQT+IKLFYRPAAI    
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP  150

Query  152  AEMATPWQEKLTLSKQGDKYQVNNPTPYYITLVDAGSKKGVEGVKGFEPLMVPPKGNMSL  211
             E+   WQ++L L+K ++ Y+++NPTPYY+T+++ G+         FE +M++P+++ ++
Sbjct  151  NEV---WQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  212  GVSAAALGGTPVLTYINDYGGRPQLTFNCSGSTCQVVPEK  251
              +      TP L+YINDYGGRP L+F C+GS C V  EK
Sbjct  208  KSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

78) D782_0706 in NC_020063


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  212 bits (787),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 116/252 (47%), Positives = 182/252 (73%), Gaps = 14/252 (5%)

Query  1    MTIVRSSAI--AITTLILAGLTQSATAAVSLDRTRVIFDGAAKSVSLRITNENKTLPYLA  58
            ++++R   +  AI  ++++G    A AAVSLDRTR +FDG+ KS++L I+N+NK LPYLA
Sbjct  4    LSMIRKKILMAAIPLFVISG----ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  59   QGWIE-DPQGKKITDPLVLLPPVQRIEPGEQSQLKVQSTASVHRLPQDRESLFYFNLREI  117
            Q+WIE + Q K IT+P++  PPVQR+EPG +S +++ +T+ + +LPQDRESLFYFNLREI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  118  PPKSSKPNTLQLALQTRIKLFYRPEAIEVKRADYATPFQEQVTLTRAGDKYRVNNPTPYY  177
            PP+S K+N LQ+ALQT+IKLFYRP AI  +  +     Q+Q+ L + ++ YR++NPTPYY
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNE---VWQDQLILNKVSGGYRIENPTPYY  176

Query  178  ISLVNASSTLTGKAAAGFKPVMVEPKGQIDLAPSASELGGAPVLTYVNDFGGRAKLVFSC  237
            ++++  +++      + F  VM+ P+++  + ++  +   +P L+Y+ND+GGR+ L F C
Sbjct  177  VTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYN---TPYLSYINDYGGRPVLSFIC  233

Query  238  NGGACKAVPQEK  249
            NG+ C +V +EK
Sbjct  234  NGSRC-SVKKEK  244

79) Entas_0857 in NC_015968


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  210 bits (780),  Expect = 7e-56, Method: Compositional matrix adjust.
 Identities = 118/248 (48%), Positives = 180/248 (73%), Gaps = 9/248 (3%)

Query  1    MTIVRISAL-TGMALMFSGVATAAVSLDRTRVIFDGDAKSVSLRLTNENKTLPYLAQGWV  59
            ++++R   L ++++L   + A AAVSLDRTR +FDG  KS++L ++N+NK LPYLAQ+W+
Sbjct  4    LSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWI  63

Query  60   E-DPQGKKITDPLVLLPPVQRIEPGEQSQIKVQSTAGIQRLPQDRESLFYFNLREIPPKS  118
            E + Q K IT+P++  PPVQR+EPG +S +++ +T++I +LPQDRESLFYFNLREIPP+S
Sbjct  64   ENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRS  123

Query  119  SKPNTLQLALQTRIKLFYRPAAIEVKHVDYATPFQEQLTLTREGDKYRVNNPTPYYISLV  178
             K+N LQ+ALQT+IKLFYRPAAI  +  +     Q+QL L + ++ YR++NPTPYY++++
Sbjct  124  EKANVLQIALQTKIKLFYRPAAIKTRPNE---VWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  179  NASSALTGKAAAGFKPIMVEPRGQLVlaasasalggaPVLTYVNDFGGRAKLVFSCGGSE  238
              +++      + F  +M+ PR++    +  SA   +P L+Y+ND+GGR+ L F C GS 
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSE---QTVKSANYNTPYLSYINDYGGRPVLSFICNGSR  237

Query  239  CKAVPQEK  246
            C +V +EK
Sbjct  238  C-SVKKEK  244

80) W5S_1575 in NC_017845


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  210 bits (780),  Expect = 8e-56, Method: Compositional matrix adjust.
 Identities = 118/218 (55%), Positives = 167/218 (77%), Gaps = 5/218 (2%)

Query  41   DRTRVIFDGSQNSVSLDISNQNKQLPYLAQGWVEDEKGNKI-QGPLAALPPVQRIEPGKP  99
            DRTR +FDGS++S++LDISN+NKQLPYLAQ+W+E+E+ +KI  GP+ A PPVQR+EPG  
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  100  GQIKIQALPVIGQLPQDRESLYYFNLREIPPRSTKPNTLQIALQTRIKLFYRPAAIVMDK  159
            + +++ + P I++LPQDRESL+YFNLREIPPRS K+N LQIALQT+IKLFYRPAAI   +
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  160  NAAPPQEKLTLSRQGDKYIVNNPTPYYITLVDAGSKKDIAGVAGFEPMMIPPRGSMPLTV  219
                 Q++L L++ ++ Y ++NPTPYY+T+++ G+    A  + FE +M++PR+    TV
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ--TV  207

Query  220  SAASVGNRPVLTYVNDYGGRPQLTFTCSGVGCTVIPEK  257
             +A+    P L+Y+NDYGGRP L+F C+G  C+V  EK
Sbjct  208  KSANYNT-PYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

81) M495_06905 in NC_021741


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  209 bits (776),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 128/228 (57%), Positives = 169/228 (75%), Gaps = 5/228 (2%)

Query  20   VQSAYAAIALDRTRVIFDGSEKSVSLNVSNENKQLPYLAQGWIEDEKGNKI-TSPLTVLP  78
            + +A AA++LDRTR +FDGSEKS++L++SN+NKQLPYLAQ+WIE+E+ +KI T+P+   P
Sbjct  21   ISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATP  80

Query  79   PVQRIEPGAKSQVKVQGLPALSTLPQDRESLFYFNLREIPPRSEKPNTLQIALQTRIKLF  138
            PVQR+EPGAKS V++   P +S LPQDRESLFYFNLREIPPRSEK+N LQIALQT+IKLF
Sbjct  81   PVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLF  140

Query  139  YRpqaiqpaasaspaqeaLTLSKVGNKYKLINPTPYFVTIVDGSNSPKGLPLKGFEPLML  198
            YR  A   + +    Q+ L L+KV+  Y++ NPTPY+VT+++ + S K      FE +ML
Sbjct  141  YR-PAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVML  199

Query  199  APKSEGMLNLNAEALGSNPVLTYINDYGGRPQLQFTCAGSTCQAKSLK  246
            +P+SE  ++    A  + P L+YINDYGGRP L F C GS C  K  K
Sbjct  200  SPRSEQTVK---SANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

82) fimD in NC_002940


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  208 bits (775),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 123/247 (50%), Positives = 177/247 (72%), Gaps = 7/247 (2%)

Query  2    KLNKYMSAVTGIIVGVFVTNATQAAIGLDRTRVVFEGDKKAMSLGISNNNKQLPYLAQAW  61
            KL+     +    + +FV ++++AA++LDRTR VF+G  K+M+L+ISN+NKQLPYLAQAW
Sbjct  3    KLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAW  62

Query  62   IEDVNGKKI-TSPFVVLPPIQRVEPEKSSQVKIEALPAINSLPQDRESLFYSNLREIPPK  120
            IE+ N  KI T+P +  PP+QR+EP   S V++ + P I+ LPQDRESLFY NLREIPP+
Sbjct  63   IENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPR  122

Query  121  SNKANTLQIALQTHVKLFYRPKAILPEKMGTPWQEKLILQKQGNTFLVKNPTAYYVTLVD  180
            S+KAN LQIALQT +KLFYRP AI   +    WQ++LIL+K +  + + NPT+YYVT+++
Sbjct  123  SEKANVLQIALQTKIKLFYRPAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIG  181

Query  181  -ASNGKTQTDIQFNPVMLAPFSDSPLGVNVSTLGAKPSLTYIDDYGGIKELSFDCNGNEC  239
             +++ K   + +F+ VML+P S+    V+ +   + P L+YI+DYGG   LSF CNG+ C
Sbjct  182  LGGSEKQAEEGEFETVMLSPRSEQ--TVKSANYNT-PYLSYINDYGGRPVLSFICNGSRC  238

Query  240  RVVNKDK  246
              V+K+K
Sbjct  239  S-VKKEK  244

83) S70_17485 in NC_017731


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  207 bits (768),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 114/220 (52%), Positives = 166/220 (76%), Gaps = 7/220 (3%)

Query  43   DRTRAIITGDEKSISLNISNENKQLPYLAQGWVENEKGEKI-SDPFTVLPPVQRVEPGAK  101
            DRTRA++ G EKS++L+ISN+NKQLPYLAQ+W+ENE+ EKI ++P    PPVQR+EPGAK
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  102  SQIKIQALPSAAALPQDRESVYYFNLREIPPKSDKPNTLQLALQTRIKLFYRPKAIIPTR  161
            S +++ + P  + LPQDRES++YFNLREIPP+S+K+N LQ+ALQT+IKLFYRP AI   +
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI---K  147

Query  162  EQMDNPWQEKVTLTRQGNQYTINNPTAYYVSFVDAVPNKNGQTVAGFEPVMVAPKSSKAL  221
             + ++ WQ+++ L + +  Y I+NPT+YYV+ ++   + +    + FE VM++P+S +++
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  222  NVSADALGNKPVLTYINDYGGRPTLSFTCQGNSCHVVPEK  261
            + +     N P L+YINDYGGRP LSF C+G+ C V  EK
Sbjct  208  KSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

84) Ent638_0404 in NC_009436


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  207 bits (768),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 115/244 (48%), Positives = 180/244 (74%), Gaps = 11/244 (4%)

Query  8    LKKSVMTVSLLAGLMIAQQASAAIALDRTRVIYNGGEKSTSLNISNENKNLPYLAQAWME  67
            ++K ++  ++   L +   A AA++LDRTR +++G+EKS +L+ISN+NK+LPYLAQAW+E
Sbjct  7    IRKKILMAAI--PLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIE  64

Query  68   DAQGTKI-TSPLTVLPPVQRVEAGAKSQVKLQAAAAVATLPQDRETLFYFNLREIPPRST  126
            + +  KI T+P+   PPVQR+E+GAKS V+L +++ ++ LPQDRE+LFYFNLREIPPRS 
Sbjct  65   NENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSE  124

Query  127  KPNTLQIALQTRIKLFYRPAAIALDKTQSAQGDWVEKVTLTRQGDQFVVNNPTPYYLTLV  186
            K+N LQIALQT+IKLFYRPAAI   KT++ +  W +++ L + ++ + ++NPTPYY+T++
Sbjct  125  KANVLQIALQTKIKLFYRPAAI---KTRPNEV-WQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  187  E-GAPSVKGKPVGFEPVMIAPKEsgaikasaaalgasPVFTYVNDYGGRPQIQFSCGGTT  245
              G++  ++    FE VM++P+     ++  +A   +P ++Y+NDYGGRP + F C G+ 
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRS---EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSR  237

Query  246  CTGK  249
            C+ K
Sbjct  238  CSVK  241

85) SerAS12_4817 in NC_015566


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  206 bits (767),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 115/218 (53%), Positives = 165/218 (76%), Gaps = 5/218 (2%)

Query  32   DRTRVIFDGDQKSVSLNISNQNKQLPYLAQGWLEDDKGNKI-QSPLTVLPPVQRVEPGKP  90
            DRTR +FDG +KS++L+ISN+NKQLPYLAQ+W+E+++ +KI  +P+   PPVQR+EPG  
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  91   SQVKIQALPAAKQLPQDRESIYYFNLREIPPKSDKPNTLQIALQTRIKLFYRPAAIAVQK  150
            S V++ + P   +LPQDRES++YFNLREIPP+S+K+N LQIALQT+IKLFYRPAAI   +
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKT-R  149

Query  151  NTDPAQEQLTLTKQGDKYVVNNPTPYYVTIVDASSKKDGAGVKGFEPFMVPPKGNAPLTV  210
              +  Q+QL L K ++ Y ++NPTPYYVT+++ ++    A    FE  M++P+++   TV
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ--TV  207

Query  211  SAASVGSAPVLTYINDYGGRPQLTFSCSGSSCQVVVDK  248
             +A+  ++P L+YINDYGGRP L+F C+GS C V  +K
Sbjct  208  KSANY-NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

86) SerAS13_4817 in NC_017573


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  206 bits (767),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 115/218 (53%), Positives = 165/218 (76%), Gaps = 5/218 (2%)

Query  32   DRTRVIFDGDQKSVSLNISNQNKQLPYLAQGWLEDDKGNKI-QSPLTVLPPVQRVEPGKP  90
            DRTR +FDG +KS++L+ISN+NKQLPYLAQ+W+E+++ +KI  +P+   PPVQR+EPG  
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  91   SQVKIQALPAAKQLPQDRESIYYFNLREIPPKSDKPNTLQIALQTRIKLFYRPAAIAVQK  150
            S V++ + P   +LPQDRES++YFNLREIPP+S+K+N LQIALQT+IKLFYRPAAI   +
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKT-R  149

Query  151  NTDPAQEQLTLTKQGDKYVVNNPTPYYVTIVDASSKKDGAGVKGFEPFMVPPKGNAPLTV  210
              +  Q+QL L K ++ Y ++NPTPYYVT+++ ++    A    FE  M++P+++   TV
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ--TV  207

Query  211  SAASVGSAPVLTYINDYGGRPQLTFSCSGSSCQVVVDK  248
             +A+  ++P L+YINDYGGRP L+F C+GS C V  +K
Sbjct  208  KSANY-NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

87) SerAS9_4816 in NC_015567


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  206 bits (767),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 115/218 (53%), Positives = 165/218 (76%), Gaps = 5/218 (2%)

Query  32   DRTRVIFDGDQKSVSLNISNQNKQLPYLAQGWLEDDKGNKI-QSPLTVLPPVQRVEPGKP  90
            DRTR +FDG +KS++L+ISN+NKQLPYLAQ+W+E+++ +KI  +P+   PPVQR+EPG  
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  91   SQVKIQALPAAKQLPQDRESIYYFNLREIPPKSDKPNTLQIALQTRIKLFYRPAAIAVQK  150
            S V++ + P   +LPQDRES++YFNLREIPP+S+K+N LQIALQT+IKLFYRPAAI   +
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKT-R  149

Query  151  NTDPAQEQLTLTKQGDKYVVNNPTPYYVTIVDASSKKDGAGVKGFEPFMVPPKGNAPLTV  210
              +  Q+QL L K ++ Y ++NPTPYYVT+++ ++    A    FE  M++P+++   TV
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ--TV  207

Query  211  SAASVGSAPVLTYINDYGGRPQLTFSCSGSSCQVVVDK  248
             +A+  ++P L+YINDYGGRP L+F C+GS C V  +K
Sbjct  208  KSANY-NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

88) AHML_02170 in NC_021290


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  206 bits (766),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 111/226 (50%), Positives = 162/226 (72%), Gaps = 7/226 (3%)

Query  19   TQAAVALDRTRVIYTGDSKSQSLNIRNHNKELPYLAQAWME-DAMGRKISSPFVVLPPVQ  77
            ++AAV+LDRTR ++ G  KS +L+I N+NK+LPYLAQAW+E +   + I++P +  PPVQ
Sbjct  24   ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQ  83

Query  78   RLEPGADSMLKVQATQASHLLPQDRESLFYFNLREIPPRSDKPNSLQLALQTRIKFFYRP  137
            RLEPGA SM+++ +T     LPQDRESLFYFNLREIPPRS+K+N LQ+ALQT+IK+FYRP
Sbjct  84   RLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRP  143

Query  138  QSLVVEPEAHVAPWQQQLKLTPTQGHYRVENPTPYFITLVDAAGKADDEGQADFTPLMLA  197
             ++   P+     WQ+QL L    G YR+ENPTPY++T+++ +G   +  +++F  +ML+
Sbjct  144  AAIKTRPN---EVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLS  200

Query  198  PFGQGELNLGVARLGNTPTLTYVDDFGGRRPLHFRCTDQHCSLTSA  243
            P  ++E  +  A   NTP L+Y++D+GGR  L F C + +CS+   
Sbjct  201  P--RSEQTVKSANY-NTPYLSYINDYGGRPVLSFICNGSRCSVKKE  243

89) pmfD in NC_022000


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  204 bits (757),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 106/231 (46%), Positives = 178/231 (78%), Gaps = 7/231 (3%)

Query  16   LALSLVNTTQAGVSLDRTRIVLTGNENSASVNLKNTSPDIPFLAQSWVENENGQKI-SSP  74
            ++L +++ ++A+VSLDRTR V+ G+E+S ++++ N + ++P+LAQ+W+ENEN +KI ++P
Sbjct  16   IPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGP  75

Query  75   LVALPPLQRLDGAQKGVVRITKTAEVGLLPQDRESLFYLNVREIPPAPKQANVLQMAMQS  134
            ++A PP+QRL+ + K++VR++ T++++ LPQDRESLFY+N+REIPP + +ANVLQ+A+Q+
Sbjct  76   VIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQT  135

Query  135  RIKLFYRPSAIVPEKPGMVWQDQLVFKKQGNKFIVNNPTPYYITIISLSNKLNGEDSDKL  194
            +IKLFYRP+AI   +P  VWQDQL+++K +  + ++NPTPYY+T+I+L+    +E     
Sbjct  136  KIKLFYRPAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG---GSEKQAEE  191

Query  195  TTFPGLMVAPKASLDIPVKTSNVNQFYMMYVNDYGGHPELKFVCQQDSCKV  245
              F  +M++P++  +  VK++N N  Y+ Y+NDYGG+P L F+C+   C V
Sbjct  192  GEFETVMLSPRS--EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

90) pmfD in NC_010554


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  204 bits (757),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 106/231 (46%), Positives = 178/231 (78%), Gaps = 7/231 (3%)

Query  16   LALSLVNTTQAGVSLDRTRIVLTGNENSASVNLKNTSPDIPFLAQSWVENENGQKI-SSP  74
            ++L +++ ++A+VSLDRTR V+ G+E+S ++++ N + ++P+LAQ+W+ENEN +KI ++P
Sbjct  16   IPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGP  75

Query  75   LVALPPLQRLDGAQKGVVRITKTAEVGLLPQDRESLFYLNVREIPPAPKQANVLQMAMQS  134
            ++A PP+QRL+ + K++VR++ T++++ LPQDRESLFY+N+REIPP + +ANVLQ+A+Q+
Sbjct  76   VIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQT  135

Query  135  RIKLFYRPSAIVPEKPGMVWQDQLVFKKQGNKFIVNNPTPYYITIISLSNKLNGEDSDKL  194
            +IKLFYRP+AI   +P  VWQDQL+++K +  + ++NPTPYY+T+I+L+    +E     
Sbjct  136  KIKLFYRPAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG---GSEKQAEE  191

Query  195  TTFPGLMVAPKASLDIPVKTSNVNQFYMMYVNDYGGHPELKFVCQQDSCKV  245
              F  +M++P++  +  VK++N N  Y+ Y+NDYGG+P L F+C+   C V
Sbjct  192  GEFETVMLSPRS--EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

91) AHA_0522 in NC_008570


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  203 bits (756),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 109/226 (49%), Positives = 167/226 (74%), Gaps = 5/226 (2%)

Query  19   NVSAAIVLDRTRVVYPGGAKSISLNIKNENQKLPYLAQSWIEDAQGQKI-ASPFAVLPPV  77
               AA+ LDRTR V+ G+ KS++L+I N+N++LPYLAQ+WIE+ + +KI ++P    PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  78   QRVDANQKSIVRIASVPAIDSLPKDRESIYYFNLREIPPKSEKSNVMQIAVQSKIKLFYR  137
            QR+++  KS+VR+++ P I  LP+DRES++YFNLREIPP+SEK+NV+QIA+Q+KIKLFYR
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  138  PEAILPERGAIWQDQVLITKLGKALKVNNPTPYYITYVGLGHPQGKGRTAMKGFSAFMVA  197
            P AI      +WQDQ+++ K++ + +++NPTPYY+T +GLG ++ ++  +   F + M++
Sbjct  143  PAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEG--EFETVMLS  200

Query  198  PKSEQTVTIPEALGNEFVISYVNDYGGYMDIKYQCKGDRCESVKEK  243
            P+SEQTV  +      + +SY+NDYGG   + + C+G RC   KEK
Sbjct  201  PRSEQTVK-SANYNTPY-LSYINDYGGRPVLSFICNGSRCSVKKEK  244

92) SMWW4_v1c01140 in NC_020211


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  201 bits (747),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 114/214 (54%), Positives = 162/214 (76%), Gaps = 5/214 (2%)

Query  50   DRTRIIFDGSQKSVSLSVSNQNKQLPYLAQGWIEDDKGNKI-QSPLTVLPPVQRIEPGKP  108
            DRTR +FDGS+KS++L +SN+NKQLPYLAQ+WIE+++ +KI  +P+   PPVQR+EPG  
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  109  SQVKIQALPVAKTLPQDRETVYYFNLREIPPKSTKPNTLQIALQTRIKLFYRPAAIAMDK  168
            S V++ + P    LPQDRE+++YFNLREIPP+S K+N LQIALQT+IKLFYRPAAI   +
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  169  NAPPPQEQLTLSKQGDKYVVNNPTAYYVTLVDAATKKDGAGIKSFEPMMVPPKGNLPLTV  228
                 Q+QL L+K ++ Y ++NPT+YYVT+++ +     A    FE +M++P+++   TV
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSE--QTV  207

Query  229  SAAEAGNSPVLTYVNDYGGRPQLSFSCSGSTCTV  262
             +A+  N+P L+Y+NDYGGRP LSF C+GS C+V
Sbjct  208  KSANY-NTPYLSYINDYGGRPVLSFICNGSRCSV  240

93) MU9_3489 in NC_020418


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  201 bits (746),  Expect = 4e-53, Method: Compositional matrix adjust.
 Identities = 105/214 (50%), Positives = 164/214 (77%), Gaps = 5/214 (2%)

Query  34   DRTRVILNGSERAESVEISNQNKELPYLAQAWIEDAQGNKI-KDPLVALPPIQRVEAGEK  92
            DRTR +++GSE++ +++ISN+NK+LPYLAQAWIE+ + +KI  +P++A PP+QR+E+G K
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  93   SQVKIQPTAGMKMLAQDKESLYYFNLREIPPKTDKANTLQIALQTRIKLFYRPAGLVVTQ  152
            S V++  T+++  L+QD+ESL+YFNLREIPP+++KAN LQIALQT+IKLFYRPA+ + T+
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAA-IKTR  149

Query  153  NAKPWQESITLTRQGNTYTVNNPTPYYVTISSASAAYKGKDISGFEAFMIAPNSSEVLGG  212
                WQ+ + L + +  Y ++NPTPYYVT+ + +++ K  + + FE+ M++P S + + +
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  213  SAVSLGNAPVLGYINDYGGRPKMIFTCQGNTCRV  246
            +     N+P L+YINDYGGRP + F C+G+ C V
Sbjct  210  ANY---NTPYLSYINDYGGRPVLSFICNGSRCSV  240

94) MU9_3500 in NC_020418


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  200 bits (743),  Expect = 6e-53, Method: Compositional matrix adjust.
 Identities = 116/222 (53%), Positives = 171/222 (78%), Gaps = 9/222 (4%)

Query  28   IALDRTRVIFNGAEKSVSLNVSNLNKELPYLAQGWIEDQNGEKI-SSPLVVLPPVQRIEP  86
            ++LDRTR +F+G+EKS++L++SN NK+LPYLAQ+WIE++N EKI ++P++  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  87   GDKSQVKIQALPAIAALPQDRESVFYFNLREIPPRSNRQNVLQIALQTRIKLFYRPEAIY  146
            G KS V++ + P I+ LPQDRES+FYFNLREIPPRS++ NVLQIALQT+IKLFYRP AI 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  147  ASQTDLTNPWQEKITLTRRGDHYEVHNPTAYYVTIVDALSGLGGKSLNG-FSPLMVAPKs  205
            +   ++   WQ+++ L + ++ Y ++NPT+YYVT++ +L+G   ++ +G F  +M++P+ 
Sbjct  148  TRPNEV---WQDQLILNKVSGGYRIENPTPYYVTVI-GLGGSEKQAEEGEFETVMLSPR-  202

Query  206  qgtlglsaaalgsapvlsYINDYGGRPQLQFSCSGAECRVTK  247
              +     +A  ++P LSYINDYGGRP L F C+G+ C V K
Sbjct  203  --SEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKK  242

95) D781_0071 in NC_020064


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  199 bits (740),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 112/218 (52%), Positives = 157/218 (73%), Gaps = 5/218 (2%)

Query  56   DRTRVIFDGDQKTVSLNISNQNKQLPYLAQGWIEDEQGNKI-QSPFTVLPPVQRVEPGKP  114
            DRTR +FDG +K+++L+ISN+NKQLPYLAQ+WIE+E+ +KI  +P    PPVQR+EPG  
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  115  SQVKIQALPAAKLLPQDRETLYYFNLREIPPRSNKPNTLQIALQTRIKMFYRPAAVAPQK  174
            S V++ + P    LPQDRE+L+YFNLREIPPRS+K+N LQIALQT+IK+FYRPAA+   +
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKT-R  149

Query  175  NAEPSQQALTLTRQGDKYVVNNPTPYYVTLVDGAARKGGKSIADFEPVMVAPKGSAPLGV  234
              E  Q+ L L + ++ Y ++NPTPYYVT+++ ++       ++FE VM++P++     V
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ--TV  207

Query  235  SAAAIGTGPVLTYINDYGGRPQLVFRCTGNLCQTVADK  272
             +A   T P L+YINDYGGRP L F C G+ C    +K
Sbjct  208  KSANYNT-PYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

96) mrfD4 in NC_020211


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  199 bits (740),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 124/243 (52%), Positives = 183/243 (76%), Gaps = 9/243 (3%)

Query  14   KHIVAAAGAVLIVSASLPAQAAIALDRTRVVFDGslnsvslsvsnQNKQLPYLAQGWIED  73
            K I+ AA +++++S+   A+AA++LDRTR VFDGS +S++L +SN+NKQLPYLAQ+WIE+
Sbjct  9    KKILMAAIPLFVISG---ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIEN  65

Query  74   EQGNKI-QSPLTVLPPVQRIEPGKPSQVKIQALPAAKQLPQDRETVYYFNLREIPPKSNK  132
            E+ +KI  +P+   PPVQR+EPG  S V++ + P   +LPQDRE+++YFNLREIPP+S+K
Sbjct  66   ENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEK  125

Query  133  PNTLQIALQTRIKLFYRPAGLGIDTNAPPPQEQLTLSRQGDKYVVNNPTPYYVTLVD-AG  191
            +N LQIALQT+IKLFYRPA++    N    Q+QL L++ ++ Y ++NPTPYYVT+++ +G
Sbjct  126  ANVLQIALQTKIKLFYRPAAIKTRPNE-VWQDQLILNKVSGGYRIENPTPYYVTVIGLGG  184

Query  192  SSKSAPVKAFEPMMVPPKGSLPLTASAAVVGNSPVLTYVNDYGGRPQLSFSCSGNICKVV  251
            S K A    FE +M++P++   + ++     N+P L+Y+NDYGGRP LSF C+G+ C V 
Sbjct  185  SEKQAEEGEFETVMLSPRSEQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVK  241

Query  252  PEK  254
             EK
Sbjct  242  KEK  244

97) mrfD3 in NC_020211


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  199 bits (741),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 111/220 (51%), Positives = 160/220 (73%), Gaps = 5/220 (2%)

Query  31   HAAIALDRTRVIFDGDLKTVSLNISNQNKQLPYLAQGWIEDDRGNKI-QSPFTVLPPVQR  89
            +AA++LDRTR +FDG  K+++L+ISN+NKQLPYLAQ+WIE++  +KI  +P    PPVQR
Sbjct  25   DAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQR  84

Query  90   VEPGKPSQVKIQSLPAARQLPQDRETLYYFNLREIPPRSNKPNTLQIALQTRIKMFYRpa  149
            +EPG  S V++ + P   +LPQDRE+L+YFNLREIPPRS+K+N LQIALQT+IK+FYR +
Sbjct  85   LEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR-P  143

Query  150  alapkknaapWQEQLTLTRQGDKYVVNNPTPYYVTIVEASagkggkgaagFEPLMVAPKA  209
            A    +    WQ+QL L + ++ Y ++NPTPYYVT++  +++      + FE +M++P++
Sbjct  144  AAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRS  203

Query  210  SAPLNVPAASLGNGPSLAYINDYGGRPQLNFRCAGSACQV  249
               ++ +     N P L+YINDYGGRP L+F C GS C V
Sbjct  204  EQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSV  240

98) S70_06645 in NC_017731


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  198 bits (737),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 124/237 (53%), Positives = 175/237 (74%), Gaps = 6/237 (2%)

Query  8    RATMGLIGLALFS-STAYSAVSMDRTRVIFDGGqksislnisnnnkqlPYLAQGWIENAE  66
            R  + + +++LF  S A +AVS+DRTR +FDG++KS++L+ISN+NKQLPYLAQ+WIEN +
Sbjct  8    RKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENEN  67

Query  67   GQKI-QSPLVVLPPVQRIEPGKSSQVKIEALPAINSLPQDRESLFYFNLREIPPKSDKPN  125
             +KI  +P++  PPVQR+EPG  S V++ + P I+ LPQDRESLFYFNLREIPP+S+K+N
Sbjct  68   QEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN  127

Query  126  TLQIALQTRVKLFYRPKAIIPEKNGAPWQDKLTLDKQGERYIVKNPTPYYVTIINATTNG  185
             LQIALQT++KLFYRP A I  +    WQD+L L+K +  Y + NPTPYYVT+I    + 
Sbjct  128  VLQIALQTKIKLFYRP-AAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSE  186

Query  186  KASDGKDFTPVMVPPFGQDDLGISANQLGNNPVLTYINDYGGRPNLTFRCQASSCQV  242
            K ++  +F  VM++P +++ +  +     N P L+YINDYGGRP L+F C++S C V
Sbjct  187  KQAEEGEFETVMLSPRSEQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSV  240

99) B565_0478 in NC_015424


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  198 bits (737),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 114/227 (51%), Positives = 167/227 (74%), Gaps = 8/227 (3%)

Query  19   NVSAAIVLDRTRAVYPGGAKSISLNIKNENQKLPYLAQAWIEDAQGQKI-SSPFVVLPPV  77
               AA+ LDRTRAV+ G+ KS++L+I N+N++LPYLAQAWIE+ + +KI ++P +  PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  78   QRVDANQKSIVRIASVPAIESLPKDRESIYYFNLREIPPKSEKSNVMQIAVQSKIKLFYR  137
            QR+++  KS+VR+++ P I  LP+DRES++YFNLREIPP+SEK+NV+QIA+Q+KIKLFYR
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  138  PEAILPERGAVWQDQVLITKQGKALKVNNPTPYYITYVGLGHPQGKERTTIKG-FSAFMV  196
            P AI      VWQDQ+++ K + + +++NPTPYY+T +GLG   G E+ +  G F + M+
Sbjct  143  PAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG---GSEKQAEEGEFETVML  199

Query  197  SPKSELTVTIPETLGNEFVISYVNDYGGYMDIKYQCAGNACKAVKSE  243
            SP+SE TV  +      + +SY+NDYGG   + + C G+ C +VK E
Sbjct  200  SPRSEQTVK-SANYNTPY-LSYINDYGGRPVLSFICNGSRC-SVKKE  243

100) AHML_02680 in NC_021290


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  198 bits (734),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 106/225 (48%), Positives = 163/225 (73%), Gaps = 5/225 (2%)

Query  19   NVSAAIVLDRTRVVYPGGAKSISLNIKNENQKLPYLAQSWIEDAQGQKI-ASPFAVLPPV  77
               AA+ LDRTR V+ G+ KS++L+I N+N++LPYLAQ+WIE+ + +KI ++P    PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  78   QRVDANQKSIVRIASVPAIDSLPKDRESIYYFNLREIPPKSEKSNVMQIAVQSKIKLFYR  137
            QR+++  KS+VR+++ P I  LP+DRES++YFNLREIPP+SEK+NV+QIA+Q+KIKLFYR
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  138  PEAILPERGAIWQDQVLITKQGKALKVNNPTPYYITYVGLGHPQGKGRTAMKGFSAFMVA  197
            P AI      +WQDQ+++ K + + +++NPTPYY+T +GLG ++ ++  +   F + M++
Sbjct  143  PAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEG--EFETVMLS  200

Query  198  PKSEQTVTIPETLGNEFVISYVNDYGGYMDIKYQCTGNACKAIKS  242
            P+SEQTV  +      + +SY+NDYGG   + + C G+ C   K 
Sbjct  201  PRSEQTVK-SANYNTPY-LSYINDYGGRPVLSFICNGSRCSVKKE  243

101) SMWW4_v1c03260 in NC_020211


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  197 bits (730),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 119/218 (55%), Positives = 163/218 (75%), Gaps = 5/218 (2%)

Query  33   DRTRVIFDGSEKSVSLNISNQNKQLPYLAQGWLEDEKGNKI-QSPLAVLPPVQRVEPGKP  91
            DRTR +FDGSEKS++L+ISN+NKQLPYLAQ+W+E+E+ +KI  +P+   PPVQR+EPG  
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   SQVKIQALPATKQLPQDRESLYYFNLREIPPKSDKPNTLQIALQTRIKLFYRpaaiapqq  151
            S V++ + P   +LPQDRESL+YFNLREIPP+S+K+N LQIALQT+IKLFYR +A    +
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR-PAAIKTR  149

Query  152  naapwqEQLTLSKQGDKYVVNNPTPYYVTLVDAGARKGVAGVQGFEPLMVPPKSSAPLGV  211
                WQ+QL L+K ++ Y ++NPTPYYVT+++ G+    A    FE +M++P+S     V
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ--TV  207

Query  212  NASALGNGPVLTYINDYGGRPQLTFNCSGSACQVVPEK  249
            +++   N P L+YINDYGGRP L+F C+GS C V  EK
Sbjct  208  KSANY-NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

102) fimD in NC_009348


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 111/226 (50%), Positives = 161/226 (72%), Gaps = 7/226 (3%)

Query  19   NVSAAIVLDRTRAVYPGGAKSISLNIKNENQKLPYLAQAWIEDALGQKIVS-PFVVLPPV  77
               AA+ LDRTRAV+ G+ KS++L+I N+N++LPYLAQAWIE+   +KI++ P +  PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  78   QRVDANQKSIVRIASVPAIETLPKDRESIYYFNLREIPPKSEKSNVMQIAVQSKIKLFYR  137
            QR+++  KS+VR+++ P I  LP+DRES++YFNLREIPP+SEK+NV+QIA+Q+KIKLFYR
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  138  PEAILPERGAVWQDQVTITKQGTTLKVNNPTPYYVTYVGLAHPKGKEKTSIKG-FSAFMV  196
            P AI      VWQDQ+ + K +   +++NPTPYYVT +GL+   G EK +  G F + M+
Sbjct  143  PAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG---GSEKQAEEGEFETVML  199

Query  197  APKSELDAKIPETLGSEFIISYVNDYGGYMDIKYQCVGNACKAMKS  242
            +P+SE   K +    + + +SY+NDYGG   + + C G+ C   K 
Sbjct  200  SPRSEQTVK-SANYNTPY-LSYINDYGGRPVLSFICNGSRCSVKKE  243

103) YPK_0053 in NC_010465


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (726),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 105/244 (44%), Positives = 181/244 (75%), Gaps = 5/244 (2%)

Query  8    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  67
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  68   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  126
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  127  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKQVGGLKINNPTPYYITL  186
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K  GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  187  AYLSQNEKGNFPG-FDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  245
              L+ +EK    G F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  246  CQIQ  249
            C ++
Sbjct  238  CSVK  241

104) fimC10 in NC_005810


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 183/244 (75%), Gaps = 5/244 (2%)

Query  28   IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  87
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  88   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  146
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  147  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITL  206
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  207  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  265
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  266  CQIQ  269
            C ++
Sbjct  238  CSVK  241

105) y4060 in NC_004088


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 183/244 (75%), Gaps = 5/244 (2%)

Query  28   IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  87
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  88   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  146
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  147  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITL  206
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  207  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  265
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  266  CQIQ  269
            C ++
Sbjct  238  CSVK  241

106) A1122_05625 in NC_017168


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (729),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 183/244 (75%), Gaps = 5/244 (2%)

Query  8    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  67
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  68   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  126
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  127  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITL  186
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  187  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  245
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  246  CQIQ  249
            C ++
Sbjct  238  CSVK  241

107) YPA_4131 in NC_008150


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (729),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 183/244 (75%), Gaps = 5/244 (2%)

Query  8    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  67
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  68   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  126
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  127  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITL  186
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  187  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  245
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  246  CQIQ  249
            C ++
Sbjct  238  CSVK  241

108) YPO4041 in NC_003143


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (729),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 183/244 (75%), Gaps = 5/244 (2%)

Query  8    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  67
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  68   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  126
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  127  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITL  186
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  187  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  245
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  246  CQIQ  249
            C ++
Sbjct  238  CSVK  241

109) YPD4_3555 in NC_017154


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (729),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 183/244 (75%), Gaps = 5/244 (2%)

Query  8    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  67
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  68   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  126
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  127  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITL  186
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  187  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  245
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  246  CQIQ  249
            C ++
Sbjct  238  CSVK  241

110) YPD8_3562 in NC_017160


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (729),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 183/244 (75%), Gaps = 5/244 (2%)

Query  8    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  67
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  68   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  126
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  127  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITL  186
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  187  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  245
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  246  CQIQ  249
            C ++
Sbjct  238  CSVK  241

111) YPN_3688 in NC_008149


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (729),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 183/244 (75%), Gaps = 5/244 (2%)

Query  8    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  67
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  68   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  126
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  127  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITL  186
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  187  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  245
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  246  CQIQ  249
            C ++
Sbjct  238  CSVK  241

112) YPDSF_3783 in NC_009381


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (729),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 183/244 (75%), Gaps = 5/244 (2%)

Query  8    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  67
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  68   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  126
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  127  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITL  186
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  187  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  245
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  246  CQIQ  249
            C ++
Sbjct  238  CSVK  241

113) YPTS_4111 in NC_010634


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  196 bits (729),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 183/244 (75%), Gaps = 5/244 (2%)

Query  8    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  67
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  68   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  126
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  127  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITL  186
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  187  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  245
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  246  CQIQ  249
            C ++
Sbjct  238  CSVK  241

114) mrfD in NC_010694


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 109/219 (50%), Positives = 164/219 (75%), Gaps = 5/219 (2%)

Query  31   LDRTRVIFNGDQTSVSLNISNQNKQLPYLAQGWLEDDKGNKIQT-PMTVLPPVQRIEPNK  89
            LDRTR +F+G + S++L+ISN+NKQLPYLAQ+W+E+++ +KI T P+   PPVQR+EP  
Sbjct  30   LDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGA  89

Query  90   PSQIKIqalpqaaqlaqDRETLFYFNLREIPPKSDKANTLQIALQTRIKLFFRPAAIAVQ  149
             S +++ + P+ ++L+QDRE+LFYFNLREIPP+S+KAN LQIALQT+IKLF+RPAAI   
Sbjct  90   KSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKT-  148

Query  150  KNSAPAQEQMTLSRQGDSFVVNNPTPYYVTIIDASNMKNGTGAKGFQPFMVAPKSSVPLT  209
            + +   Q+Q+ L++ ++++ ++NPTPYYVT+I+ +   + +    F+  M++P+S   + 
Sbjct  149  RPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVK  208

Query  210  VSASSVGSAPVLTYINDYGGRPQLSFSCNGSSCKVVPDK  248
             +     ++P L+YINDYGGRP LSF CNGS C V  +K
Sbjct  209  SANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

115) YpsIP31758_4105 in NC_009708


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 182/244 (75%), Gaps = 5/244 (2%)

Query  2    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  61
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  62   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  120
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  121  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKQVGGLKINNPTPYYITL  180
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K  GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  181  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  239
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  240  CQIQ  243
            C ++
Sbjct  238  CSVK  241

116) YPTB3894 in NC_006155


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  195 bits (725),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 182/244 (75%), Gaps = 5/244 (2%)

Query  8    IWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLA  67
            +W+   ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLA
Sbjct  1    MWKLSMIRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLA  59

Query  68   QSWLENTKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREI  126
            Q+W+EN + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REI
Sbjct  60   QAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREI  119

Query  127  PPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKQVGGLKINNPTPYYITL  186
            PP+SE  NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K  GG +I+NPTPYY+T+
Sbjct  120  PPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  187  AYLSQNE-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAE  245
              L+ +E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ 
Sbjct  180  IGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSR  237

Query  246  CQIQ  249
            C ++
Sbjct  238  CSVK  241

117) Spro_4722 in NC_009832


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  193 bits (717),  Expect = 7e-51, Method: Compositional matrix adjust.
 Identities = 111/220 (51%), Positives = 169/220 (77%), Gaps = 9/220 (4%)

Query  33   DRTRVIFDGGQNSVSLNISNQNKQLPYLAQAWLEDEQGTKI-QSPLVVLPPVQRVEPGKP  91
            DRTR +FDG+++S++L+ISN+NKQLPYLAQAW+E+E+  KI  +P++  PPVQR+EPG  
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   SQVKIQALSAAKQLPQDRETLYYFNLREIPPKSDKPNTLQIALQTRIKLFYRpaaiapqq  151
            S V++ + +   +LPQDRE+L+YFNLREIPP+S+K+N LQIALQT+IKLFYR +A    +
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR-PAAIKTR  149

Query  152  naapwqEKLTLSKQGDKYQVNNPTPYYITIV--DASSKKGAEGVKGFEPLMVPPKGNISL  209
                WQ++L L+K ++ Y+++NPTPYY+T++  ++S K++ EG   FE +M++P+++ ++
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEG--EFETVMLSPRSEQTV  207

Query  210  GVSATALGSSPVLTYINDYGGRPPLTFNCSGGSCQVVPEK  249
              +     ++P L+YINDYGGRP L+F C+G+ C V  EK
Sbjct  208  KSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

118) Rahaq2_0414 in NC_016818


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  192 bits (711),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 167/215 (78%), Gaps = 4/215 (1%)

Query  24   AAVNLDRTRIIYNASDKSVSVMLENQSKDLPYLAQVWLENAKGEKI-TSPLVALPPMQRI  82
            AAV+LDRTR ++++S+KS+++ + N++K+LPYLAQ W+EN + EKI T+P++A PP+QR+
Sbjct  26   AAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL  85

Query  83   DAGQKSQIRILQLPETAGLPKDRESLFYFNVREVPPKSDMANVMQVAIQSRVKLFFRPAE  142
            ++G KS +R+   P+ + LP+DRESLFYFN+RE+PP+S+ ANV+Q+A+Q+++KLF+RPA 
Sbjct  86   EPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAA  145

Query  143  IRSLVKGNWQEQLQVIRLSDGLKLTNPTPFYITV-GYLGKDNKGNIPGFDSVMLAPFATE  201
            I++  +  WQ+QL + ++S+G ++ NPTP+Y+TV G  G +++++   F++VML+P + +
Sbjct  146  IKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ  205

Query  202  NLSGRQYVSQQYSLGYMDDYGGLQVNEYHCQTQQC  236
             + + +Y +  Y L+Y++DYGG  V  + C+  +C
Sbjct  206  TVKSANY-NTPY-LSYINDYGGRPVLSFICNGSRC  238

119) Q7S_01940 in NC_017047


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  192 bits (712),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 96/215 (45%), Positives = 166/215 (78%), Gaps = 4/215 (1%)

Query  24   AAVNLDRTRIIYNASDKSVSVMLENQSKDLPYLAQVWLENEQGEKI-TSPLVALPPMQRI  82
            AAV+LDRTR ++++S+KS+++ + N++K+LPYLAQ W+ENE+ EKI T+P++A PP+QR+
Sbjct  26   AAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL  85

Query  83   DAGQKSQIRILQLPETAGLPKDRESLFYFNVREVPPKSDMANVMQVAIQSRVKLFFRPVE  142
            ++G KS +R+   P+ + LP+DRESLFYFN+RE+PP+S+ ANV+Q+A+Q+++KLF+RP  
Sbjct  86   EPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAA  145

Query  143  LRKLVKGHWQEQLQVARLSDGLKLTNPTPFYITV-GYLGKDNKGNIPGFDSVMLAPFASE  201
            ++   +  WQ+QL + ++S+G ++ NPTP+Y+TV G  G +++++   F++VML+P + +
Sbjct  146  IKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ  205

Query  202  NLTGKQYVSQQYSLGYMDDYGGLQVNEYNCQTQQC  236
             + + +Y +  Y L+Y++DYGG  V  + C+  +C
Sbjct  206  TVKSANY-NTPY-LSYINDYGGRPVLSFICNGSRC  238

120) Rahaq_0388 in NC_015061


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  192 bits (711),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 96/215 (45%), Positives = 166/215 (78%), Gaps = 4/215 (1%)

Query  24   AAVNLDRTRIIYNASDKSVSVMLENQSKDLPYLAQVWLENEQGEKI-TSPLVALPPMQRI  82
            AAV+LDRTR ++++S+KS+++ + N++K+LPYLAQ W+ENE+ EKI T+P++A PP+QR+
Sbjct  26   AAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL  85

Query  83   DAGQKSQIRILQLPETAGLPKDRESLFYFNVREVPPKSDMANVMQVAIQSRVKLFFRPVE  142
            ++G KS +R+   P+ + LP+DRESLFYFN+RE+PP+S+ ANV+Q+A+Q+++KLF+RP  
Sbjct  86   EPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAA  145

Query  143  LRKLVKGHWQEQLQVARLSDGLKLTNPTPFYITV-GYLGKDNKGNIPGFDSVMLAPFATE  201
            ++   +  WQ+QL + ++S+G ++ NPTP+Y+TV G  G +++++   F++VML+P + +
Sbjct  146  IKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ  205

Query  202  NLTGKQYVSQQYSLGYMDDYGGLQVNEYNCQTQQC  236
             + + +Y +  Y L+Y++DYGG  V  + C+  +C
Sbjct  206  TVKSANY-NTPY-LSYINDYGGRPVLSFICNGSRC  238

121) YE105_C3852 in NC_015224


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  192 bits (711),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 101/241 (42%), Positives = 177/241 (74%), Gaps = 4/241 (1%)

Query  11   RVNRQRNNTLVGTALLFVTMMSEASISLDRTRIIFNSADTSASVILQNKSEVLPYLAQSW  70
            +++  R++ L+++  LFV   ++A++SLDRTR +F++++ S ++ + N +  LPYLAQ+W
Sbjct  3    KLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAW  62

Query  71   LENAAGQKV-DSPLSALPAITRIDVGQKSLVRIISLPDIEQLAADRETLFYFNVREIPPK  129
            +EN   +K+  +P+ A P++ R++ G KS+VR+ + PDI +L+ DRE+LFYFN+REIPP+
Sbjct  63   IENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPR  122

Query  130  SEITAVVQIAIQNKIKLFYRPAAIKADYKNVWQEKLQIRQQGEELRIHNPTPYYVTLGHL  189
            SE + V+QIA+Q KIKLFYRPAAIK+  ++VWQ++L + + +   RI+NPTPYYVT+  L
Sbjct  123  SEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGL  182

Query  190  -NRDNRGNFPGFDSVMIAPFGTESVKTPGYNGNGYSLGYMDDFGQMIIRSVNCSIGHCRI  248
               +++++   F++VM++P + ++VK++ YN   Y L+Y++D+G   + S  C+ ++C +
Sbjct  183  GGSEKQAEEGEFETVMLSPRSEQTVKSANYN-TPY-LSYINDYGGRPVLSFICNGSRCSV  240

Query  249  Q  249
            +
Sbjct  241  K  241

122) Y11_30571 in NC_017564


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  192 bits (711),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 101/241 (42%), Positives = 177/241 (74%), Gaps = 4/241 (1%)

Query  11   RVNRQRNNTLVGTALLFVTMMSEASISLDRTRIIFNSADTSASVILQNKSEVLPYLAQSW  70
            +++  R++ L+++  LFV   ++A++SLDRTR +F++++ S ++ + N +  LPYLAQ+W
Sbjct  3    KLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAW  62

Query  71   LENAAGQKV-DSPLSALPAITRIDVGQKSLVRIISLPDIEQLAADRETLFYFNVREIPPK  129
            +EN   +K+  +P+ A P++ R++ G KS+VR+ + PDI +L+ DRE+LFYFN+REIPP+
Sbjct  63   IENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPR  122

Query  130  SEITAVVQIAIQNKIKLFYRPAAIKADYKNVWQEKLQIRQQGEELRIHNPTPYYVTLGHL  189
            SE + V+QIA+Q KIKLFYRPAAIK+  ++VWQ++L + + +   RI+NPTPYYVT+  L
Sbjct  123  SEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGL  182

Query  190  -NRDNRGNFPGFDSVMIAPFGTESVKTPGYNGNGYSLGYMDDFGQMIIRSVNCSIGHCRI  248
               +++++   F++VM++P + ++VK++ YN   Y L+Y++D+G   + S  C+ ++C +
Sbjct  183  GGSEKQAEEGEFETVMLSPRSEQTVKSANYN-TPY-LSYINDYGGRPVLSFICNGSRCSV  240

Query  249  Q  249
            +
Sbjct  241  K  241

123) yfcS in NC_013282


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  191 bits (708),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 111/223 (50%), Positives = 170/223 (77%), Gaps = 9/223 (4%)

Query  26   AAIALDRTRVVYNGGEKSISLSISNENKNLPYLAQAWIEDAQGNKV-TSPLNVLPPVQRV  84
            AA++LDRTR V++G+EKS++L ISN+NK+LPYLAQAWIE+ + +K+ T+P+   PPVQR+
Sbjct  26   AAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL  85

Query  85   EAGaksqvkvqasaavasLPQDKESLFYFNLREIPPRSTKPNTLQIALQTRIKLFYRPAA  144
            E+GAKS V++ +++ ++ LPQD+ESLFYFNLREIPPRS K+N LQIALQT+IKLFYRPAA
Sbjct  86   EPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAA  145

Query  145  IALDKTEAANGDWVEKVTLARQGDKYLVNNPTPYFLTIVE-GAASPKGKPVGFQPIMIAP  203
            I       +N  W +++ L + ++ Y ++NPTPY++T++  G++  ++    F+ +M++P
Sbjct  146  I----KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  204  KGsaaidasaaaLGNTPVLTYVNDYGGRPKIQFTCGGASCTAK  246
            ++  ++ ++     NTP L+Y+NDYGGRP + F C G+ C+ K
Sbjct  202  RSEQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVK  241

124) YpAngola_A4164 in NC_010159


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  191 bits (709),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 103/238 (44%), Positives = 180/238 (76%), Gaps = 5/238 (2%)

Query  1    MWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLAQSWLEN  60
            ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLAQ+W+EN
Sbjct  7    IRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIEN  65

Query  61   TKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREIPPQSEM  119
             + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REIPP+SE 
Sbjct  66   ENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEK  125

Query  120  NNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITLAYLSQN  179
             NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+  L+ +
Sbjct  126  ANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  180  E-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAECQIQ  236
            E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSRCSVK  241

125) YPC_4554 in NC_017265


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  191 bits (709),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 103/238 (44%), Positives = 180/238 (76%), Gaps = 5/238 (2%)

Query  1    MWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLAQSWLEN  60
            ++ K  + +I+L + +  ++AA++LDRTR +F++++KS ++ + N++   PYLAQ+W+EN
Sbjct  7    IRKKILMAAIPLFVIS-GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIEN  65

Query  61   TKGQKI-ESPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREIPPQSEM  119
             + +KI  +P++A PP+QR+++G KS VR+   PD  KLP DRE+LFYFN+REIPP+SE 
Sbjct  66   ENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEK  125

Query  120  NNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQISKLVGGLKINNPTPYYITLAYLSQN  179
             NV+QIA+Q +IKLFYRP AIK+  +++WQ++L ++K+ GG +I+NPTPYY+T+  L+ +
Sbjct  126  ANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  180  E-QGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAECQIQ  236
            E Q++   F++VM++P + + VK++ Y+ + Y ++Y++D+GG  + +F C ++ C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP-Y-LSYINDYGGRPVLSFICNGSRCSVK  241

126) YE4123A in NC_008800


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  190 bits (704),  Expect = 8e-50, Method: Compositional matrix adjust.
 Identities = 101/236 (43%), Positives = 172/236 (73%), Gaps = 4/236 (1%)

Query  16   RNNTLVGTALLFVTMMSEASISLDRTRIIFNSVDTSASVILQNKSEVLPYLAQSWLENAA  75
            R++ L+++  LFV   ++A++SLDRTR +F++ + S ++ + N +  LPYLAQ+W+EN  
Sbjct  8    RKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENEN  67

Query  76   GQKV-DSPLSALPAIQRIDVGQKSLVRIISLPDIEQLAADRETLFYFNVREIPPKSEITA  134
             +K+  +P+ A P++QR++ G KS+VR+ + PDI +L+ DRE+LFYFN+REIPP+SE + 
Sbjct  68   QEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN  127

Query  135  AVQIAIQNKIKLFYRPAAIKADYKNVWQEKLQISQQGEELKIHNPTPYYVTLGHLNRGNR  194
             +QIA+Q KIKLFYRPAAIK+  ++VWQ++L +++ +   +I+NPTPYYVT+  L  +++
Sbjct  128  VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEK  187

Query  195  GNFPG-FDNVMIAPFGTESVKTPGYNGNGYSLGYMDDFGQMIIRSVNCSIGHCRIQ  249
                G F+ VM++P + ++VK++ YN   Y L+Y++D+G   + S  C+ ++C ++
Sbjct  188  QAEEGEFETVMLSPRSEQTVKSANYN-TPY-LSYINDYGGRPVLSFICNGSRCSVK  241

127) mrfD in NC_017531


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  189 bits (703),  Expect = 9e-50, Method: Compositional matrix adjust.
 Identities = 114/243 (47%), Positives = 177/243 (73%), Gaps = 9/243 (3%)

Query  1    MSKICKTSFLSLITLMVTTAIPVANAAVGLDRTRLIINGDQKSETVTVTNHNKEAPYLAQ  60
            +S I K  +++ I L V   I+ A+AAV+LDRTR +++G +KS T+ ++N+NK+ PYLAQ
Sbjct  4    LSMIRKKILMAAIPLFV---ISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWVEDESGKKL-ENEFIALPPLQRIEPKSKGQIKVQAMGESAN-AQDRESLYYFNVREIP  118
            AW+E+E+  K+     IA PP+QR+EP +K+ +++ +  + ++ +QDRESL+YFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  119  PKSKKPNTLQIALQTRIKMFYRPASLKLASGDVPQEAITLTREGDRYRINNPTGYYVTVV  178
            P+S K+N LQIALQT+IK+FYRPA++K  + +V Q+ + L + ++ YRI+NPT YYVTV+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVI  180

Query  179  GMGST-TQASNNEFKSVMVAPksselaeasaaklGTKPVLTYINDWGGRPKLIFSCSGNT  237
            G+G++  QA + EF +VM++P+S +   ++       P L+YIND GGRP L F C+G+ 
Sbjct  181  GLGGSEKQAEEGEFETVMLSPRSEQTVKSANY---NTPYLSYINDYGGRPVLSFICNGSR  237

Query  238  CKV  240
            C V
Sbjct  238  CSV  240

128) D782_3983 in NC_020063


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  188 bits (696),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 104/230 (46%), Positives = 173/230 (76%), Gaps = 7/230 (3%)

Query  11   IAGMMLGVLSSYAQAGVSLDRTRVIITEKDASASANLSNTSPDIPFLAQSWVEDEKGNRI  70
            +A++ L V+S+ A+A+VSLDRTR ++   + S + ++SN + ++P+LAQ+W+E+E+ ++I
Sbjct  13   MAAIPLFVISG-ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKI  71

Query  71   -TSPLVVLPPLQRINGGQKGIARVTKTDGVEKLPQDRESLFYLNVREIPPKPDKPNVLQL  129
             T+P++  PP+QR++ G K++ R++ T ++ KLPQDRESLFY+N+REIPP+++K+NVLQ+
Sbjct  72   ITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQI  131

Query  130  AMQSRIKLFYRPAAIIPKSKSEIWQDQVTFQKNGTQMTAQNPTPYYVTVIGLSKAGQKI-  188
            A+Q++IKLFYRPAAI  ++ +E+WQDQ+ ++K +     +NPTPYYVTVIGL+ + ++  
Sbjct  132  ALQTKIKLFYRPAAIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAE  190

Query  189  -TRFPGIMIAPKSSQQFAITDAGVGEFSMMYVNDYGGHPELKYRCDGSTC  237
               F  +M++P+S Q  ++  A      + Y+NDYGG+P L + C+GS C
Sbjct  191  EGEFETVMLSPRSEQ--TVKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

129) KOX_00965 in NC_016612


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  187 bits (693),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 99/230 (44%), Positives = 170/230 (74%), Gaps = 6/230 (2%)

Query  1    MGVVMLAAVSGTAQAGVSLDRTRLIITGKDSSASANLTNTSPDIPFLAQSWVEDSKGNKI  60
            M+ + L  +SG A+A+VSLDRTR ++ G + S + +++N + ++P+LAQ+W+E+ + +KI
Sbjct  13   MAAIPLFVISG-ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKI  71

Query  61   -TSPLVVLPPLQRINGGQKGVARVTKTDGINQLPQDRESLFYLSVREIPPKPDKANVLQL  119
             T+P++  PP+QR++ G K++ R++ T +I++LPQDRESLFY+++REIPP+++KANVLQ+
Sbjct  72   ITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQI  131

Query  120  AMQSRIKLFYRPTAIIPKSKSEIWQDQVVFQKSGNKMTAQNPTPYYITIISL-SRVKGEK  178
            A+Q++IKLFYRP+AI  ++ +E+WQDQ++++K +     +NPTPYY+T+I+L +  K   
Sbjct  132  ALQTKIKLFYRPAAIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAE  190

Query  179  ITKFPGIMIAPKSSMEFSVTDGGVRDFAMMYVNDYGGHPELKYRCEGNTC  228
               F  +M++P+S    +V  +      + Y+NDYGG+P L + C+G+ C
Sbjct  191  EGEFETVMLSPRSEQ--TVKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

130) yfcS in NC_011601


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  187 bits (692),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 97/223 (44%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  24   STQASVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKI-SSPLAVLPPV  82
            +++A+V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+  KI ++P+   PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  83   QRIEAMMNGQVKIQGLPDIHKLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWR  142
            QR+E+  ++ V++   PDI KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF R
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  143  PKALEKNTTQNPWQHKVTLTRNGQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIVMSP  202
            P A+ K   ++ WQ+++ L + +  + ++NPTPYYV     ++  +    + F  +++SP
Sbjct  143  PAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  203  KTSAPLNVKMESVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  245
            ++   ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  202  RSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

131) A225_4643 in NC_018106


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  186 bits (688),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 96/222 (44%), Positives = 165/222 (75%), Gaps = 5/222 (2%)

Query  5    VSGTAQAGVSLDRTRLIITGKDSSASANLTNTSPDIPFLAQSWVEDSKGNKI-TSPLVVL  63
            V + A+A+VSLDRTR ++ G + S + +++N + ++P+LAQ+W+E+ + +KI T+P++  
Sbjct  20   VISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIAT  79

Query  64   PPLQRINGGQKGVARVTKTDGINQLPQDRESLFYLSVREIPPKPDKANVLQLAMQSRIKL  123
            PP+QR++ G K++ R++ T +I++LPQDRESLFY+++REIPP+++KANVLQ+A+Q++IKL
Sbjct  80   PPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKL  139

Query  124  FYRPTAIIPKSKSEIWQDQVVFQKSGNKMTAQNPTPYYITIISL-SRVKGEKITKFPGIM  182
            FYRP+AI  ++ +E+WQDQ++++K +     +NPTPYY+T+I+L +  K      F  +M
Sbjct  140  FYRPAAIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVM  198

Query  183  IAPKSSMEFSVTDGGVRDFAMMYVNDYGGHPELKYRCEGNTC  224
            ++P+S    +V  +      + Y+NDYGG+P L + C+G+ C
Sbjct  199  LSPRSEQ--TVKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

132) EAE_02595 in NC_015663


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  186 bits (689),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 100/244 (41%), Positives = 170/244 (70%), Gaps = 10/244 (4%)

Query  6    LKFARRWLKPVACGLFFIAQINASWAGIALDRTRMIITGDARSVSANLTNTSPSIPFLAQ  65
            L   R+ +   A  LF I+  +A   +++LDRTR ++ G  +S++ +++N +  +P+LAQ
Sbjct  4    LSMIRKKILMAAIPLFVISGADA---AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  66   SWVEDAHGTKI-TSPLMVLPPLQRINGGQKGIARVTKTSGVNALPQDRESLFYLNVREIP  124
            +W+E+ +  KI T+P++  PP+QR++ G K++ R++ T++++ LPQDRESLFY+N+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  125  PKPDKPNVLQLAMQSRIKLFYRPTAIVPETPGAVWQNQLIFHKQGQRWTVDNPTPYFVTL  184
            P+++K+NVLQ+A+Q++IKLFYRP+AI    P  VWQ+QLI++K +    ++NPTPY+VT+
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTV  179

Query  185  IGLSRKPEAQGGGRLTDFPGIMIPPKSSLDFKVSDASVSQFSMMYVNDFGGHPELKFSCT  244
            IGL+        G   +F  +M++P+S    K ++ + +   + Y+ND+GG+P L F C 
Sbjct  180  IGLGGSEKQAEEG---EFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICN  234

Query  245  GNVC  248
            G+ C
Sbjct  235  GSRC  238

133) ECO111_3084 in NC_013364


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  186 bits (691),  Expect = 8e-49, Method: Compositional matrix adjust.
 Identities = 97/223 (44%), Positives = 159/223 (72%), Gaps = 2/223 (0%)

Query  25   SSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKI-SSPLAVLPPV  83
            +++A+V+ DRTR VF+ S+KS+++ + N++  LPYLAQ+WIE+ + +KI ++P+   PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  84   QRIDAMMNGQVKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWR  143
            QR+++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF R
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  144  PKALENTSMKSPWQHKVTLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEP  203
            P A+ +T  +  WQ+++ L + + ++ ++NPTPYYV +   ++       + F  +M+ P
Sbjct  143  PAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  204  KTSAPLNAKMDSVPVLTYINDYGARMPLYFICTGNSCQVDEEQ  246
            ++   +++   + P L+YINDYG+R  L FIC G+ C V  E+
Sbjct  202  RSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

134) ECO26_3324 in NC_013361


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  186 bits (691),  Expect = 8e-49, Method: Compositional matrix adjust.
 Identities = 97/223 (44%), Positives = 159/223 (72%), Gaps = 2/223 (0%)

Query  25   SSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKI-SSPLAVLPPV  83
            +++A+V+ DRTR VF+ S+KS+++ + N++  LPYLAQ+WIE+ + +KI ++P+   PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  84   QRIDAMMNGQVKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWR  143
            QR+++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF R
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  144  PKALENTSMKSPWQHKVTLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEP  203
            P A+ +T  +  WQ+++ L + + ++ ++NPTPYYV +   ++       + F  +M+ P
Sbjct  143  PAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  204  KTSAPLNAKMDSVPVLTYINDYGARMPLYFICTGNSCQVDEEQ  246
            ++   +++   + P L+YINDYG+R  L FIC G+ C V  E+
Sbjct  202  RSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

135) yfcS in NC_011751


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  186 bits (691),  Expect = 8e-49, Method: Compositional matrix adjust.
 Identities = 97/223 (44%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  24   STQASVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKI-SSPLAVLPPV  82
            +++A+V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+  KI ++P+   PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  83   QRIEAMMNGQVKIQGLPDIHKLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWR  142
            QR+E+  ++ V++   PDI KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF R
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  143  PKALEKNTTQNPWQHKVTLTRNGQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIVMSP  202
            P A+ K   ++ WQ+++ L + +  + ++NPTPYYV     ++  +    + F  +++SP
Sbjct  143  PAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  203  KTSAPLNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  245
            ++   ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  202  RSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

136) EC042_2577 in NC_017626


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  186 bits (690),  Expect = 9e-49, Method: Compositional matrix adjust.
 Identities = 96/223 (44%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  24   STQASVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKI-SSPLAVLPPV  82
            +++A+V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+  KI ++P+   PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  83   QRIDAMMNGQVKIQGLPDIHKLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWR  142
            QR+++  ++ V++   PDI KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF R
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  143  PKALEKNTTQNPWQHKVTLTRNGQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIVMSP  202
            P A+ K   ++ WQ+++ L + +  + ++NPTPYYV     ++  +    + F  +++SP
Sbjct  143  PAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  203  KTSAPLNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  245
            ++   ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  202  RSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

137) pmfD in NC_010694


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  185 bits (685),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 107/231 (47%), Positives = 173/231 (75%), Gaps = 6/231 (2%)

Query  11   IAAAALSVFS-SGVQAGISLDRTRVVITETEasssanlsnssaDIPFLAQSWVEDEKGNK  69
            I  AA+++F  SG +A++SLDRTR V+  +E S + ++SN + ++P+LAQ+W+E+E+ +K
Sbjct  11   ILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEK  70

Query  70   I-TAPLIVLPPLQRINGGQKGIARVSKTAGIEKLPKDRESLFYLNVREIPPKPDKPNTLQ  128
            I T+P+I  PP+QR++ G K++ R+S T++I KLP+DRESLFY+N+REIPP+++K+N LQ
Sbjct  71   IITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQ  130

Query  129  LAMQSRIKLFYRPAAVIPKSKSAIWQDQVIFNKSGGQMTAQNPTPYYITIIELSGKEGK-  187
            +A+Q++IKLFYRPAA+  ++ + +WQDQ+I+NK +G    +NPTPYY+T+I L+G E + 
Sbjct  131  IALQTKIKLFYRPAAIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQA  189

Query  188  KMTRFPGLMIAPKSSQQFDITEADVREFSMMYVNDYGGHPQLKYRCEGNTC  238
                F  +M++P+S Q   +  A+     + Y+NDYGG+P L + C+G+ C
Sbjct  190  EEGEFETVMLSPRSEQ--TVKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

138) ROD_34991 in NC_013716


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  185 bits (686),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 97/214 (46%), Positives = 161/214 (76%), Gaps = 5/214 (2%)

Query  27   VSLDRTRVIITEKEASSSANLTNTSPDIPFLAQSWVEDENGNKI-TSPLLVLPPLQRING  85
            VSLDRTR ++   E S + +++N + ++P+LAQ+W+E+EN +KI T+P++  PP+QR++ 
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   GQKGIARVTKTAGIEKLPKDRESLFYLNVREIPPKPDKPNTLQLAMQSRIKLFYRPAAVI  145
            G K++ R++ T++I KLP+DRESLFY+N+REIPP+++K+N LQ+A+Q++IKLFYRPAA+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  146  PKTKSEIWQDQVVFHKNGSQMTAENPTPYYITILGLSKGAGQ-KITRFPGIMIAPKSSKQ  204
             +  +E+WQDQ++++K ++    ENPTPYY+T++GL+ +  Q     F  +M++P+S + 
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ-  205

Query  205  FAVTDSGVNQFSMMYVNDYGGHPELKFRCDGNTC  238
             +V  +  N   + Y+NDYGG+P L F C+G+ C
Sbjct  206  -TVKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

139) yfcS in NC_011745


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  185 bits (686),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 104/241 (44%), Positives = 167/241 (70%), Gaps = 3/241 (1%)

Query  8    PMLVSTALMAQLTTASLT-AHASVTPDRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLE  66
            +M+    LMA +    ++ A+A+V+ DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E
Sbjct  5    SMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIE  64

Query  67   DEKGNKI-TSPLAVLPPVQRIDAMMNGQVKIQALPDIHTLPSDRESLFYYNVREIPPKSG  125
            +E+ +KI T+P+   PPVQR+++  ++ V++ + PDI  LP DRESLFY+N+REIPP+S 
Sbjct  65   NENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSE  124

Query  126  KANTLQIALQTRIKLFWRPKALEKIDMRKPWQFKVTLTRSGQDYTVNNPTPYHVIISDAS  185
            KAN LQIALQT+IKLF RP A+ K      WQ ++ L + + +Y ++NPTPY V + + +
Sbjct  125  KANVLQIALQTKIKLFYRPAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLG  183

Query  186  TQKKGLTAAGFKPLVMPPKTSQPLKAKMASAPVLTYINDYGARMPLIFRCEGNTCKVDED  245
               K    + F  ++++P++ Q +K+   ++P L+YINDYG+R  L F C+G+ C V  +
Sbjct  184  GSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE  243

Query  246  Q  246
            +
Sbjct  244  K  244

140) yfcS in NC_011740


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  185 bits (686),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 95/223 (43%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  25   TTHASVTPDRTRLVFNEGDKSISVTLRNNDPKQPYLAQSWMEDEKGNKI-SSPLTVLPPV  83
             ++A+V+ DRTR VF+ ++KS+++ + N++ + PYLAQ+W+E+E+ +KI ++P+   PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  84   QRIDAMMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWR  143
            QR+++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF R
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  144  PKALAKIDMREPWQHKVTLTRNGQAFTVNNPTPYYVIISNASTQKNGNPAAGFTPLVMPP  203
            P A+ K    E WQ+++ L + + ++ ++NPTPYYV +   +   +    + F  ++++P
Sbjct  143  PAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  204  KSSAPLNVKMDTVPVLTYVNDYGARLSLNFKCNGNNCQVDAEQ  246
            +S   ++      P L+Y+NDYG+R  L+F CNG+ C V  E+
Sbjct  202  RSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

141) EcolC_1316 in NC_010468


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  184 bits (683),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 96/223 (44%), Positives = 159/223 (72%), Gaps = 2/223 (0%)

Query  25   SSHASVTPDRTRLVFNESDKSISVTLRNNDPKLPYLAQSWIEDAKGNKI-SSPLAVLPPV  83
            +++A+V+ DRTR VF+ S+KS+++ + N++ +LPYLAQ+WIE+ + +KI ++P+   PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  84   QRIDAMMNGQVKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWR  143
            QR+++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF R
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  144  PKALENTSMKSPWQHKVTLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEP  203
            P A+ +T  +  WQ+++ L + + ++ ++NPTPYYV +   ++       + F  +M+ P
Sbjct  143  PAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  204  KTSAPLNAKMDSVPVLTYINDYGARMPLYFKCTGNNCQVDEEQ  246
            ++   +++   + P L+YINDYG+R  L F C G+ C V  E+
Sbjct  202  RSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

142) EcHS_A2488 in NC_009800


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  184 bits (683),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 96/223 (44%), Positives = 159/223 (72%), Gaps = 2/223 (0%)

Query  25   SSHASVTPDRTRLVFNESDKSISVTLRNNDPKLPYLAQSWIEDAKGNKI-SSPLAVLPPV  83
            +++A+V+ DRTR VF+ S+KS+++ + N++ +LPYLAQ+WIE+ + +KI ++P+   PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  84   QRIDAMMNGQVKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWR  143
            QR+++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF R
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  144  PKALENTSMKSPWQHKVTLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEP  203
            P A+ +T  +  WQ+++ L + + ++ ++NPTPYYV +   ++       + F  +M+ P
Sbjct  143  PAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  204  KTSAPLNAKMDSVPVLTYINDYGARMPLYFKCTGNNCQVDEEQ  246
            ++   +++   + P L+YINDYG+R  L F C G+ C V  E+
Sbjct  202  RSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

143) UMNK88_2889 in NC_017641


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  184 bits (682),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 93/218 (43%), Positives = 155/218 (72%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-TSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI T+P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  KVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPATGFSPLVIEPKTTVP  208
            K   +  WQ+++ L + + ++ ++NPTPYYV +   ++  +      F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFRCDGNTCQVDKDQ  246
            ++    + P L+Y+ND+G+R  L F C+G+ C V K++
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

144) yfcS in NC_007613


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  184 bits (681),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 96/223 (44%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  25   SSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKI-SSPLAVLPPV  83
            +++A+V+ DRTR VF+ S+KS+++ + N++  LPYLAQ+WIE+ + +KI ++P+   PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  84   QRIDAMMNGQVKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWR  143
            QR+++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF R
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  144  PKALENTSMKSPWQHKVTLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEP  203
            P A+ +T  +  WQ+++ L + + ++ ++NPTPYYV +   ++       + F  +M+ P
Sbjct  143  PAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  204  KTSAPLNAKMDSVPVLTYINDYGARMPLYFKCTGNSCQVDEEQ  246
            ++   +++   + P L+YINDYG+R  L F C G+ C V  E+
Sbjct  202  RSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

145) CFSAN002050_07520 in NC_021818


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (677),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 98/221 (45%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGRSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +   +   +P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANYN---TPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

146) ECA0941 in NC_004547


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (677),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 97/228 (43%), Positives = 167/228 (74%), Gaps = 8/228 (3%)

Query  17   LFLMPSAYSALSLDRTRVIFNDDEQSATIMLMNQNAENPFLAQSWLTDEHHNKV-STPLM  75
            LF++++A +A+SLDRTR +F++ E+S T+ + N+N + P+LAQ+W+ +E+++K+ + P++
Sbjct  18   LFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVI  77

Query  76   VLPPLQRIEAKGYSLIRLVKTEKITQLPTDRESLFYLNVREIPPKAEKPNVLQIAIQSEI  135
              PP+QR+E+ + S++RL  T  I++LP DRESLFY+N+REIPP++EK+NVLQIA+Q+ I
Sbjct  78   ATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKI  137

Query  136  KVFFRPRSVKPAKDEIWQEKLIVRKTGNTFQVENPTPYYITVSSILKQPKATRANPTSLL  195
            K+F+RP ++K   +E+WQ++LI+ K +  +++ENPTPYY+TV ++       +A+   + 
Sbjct  138  KLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGL--GGSEKQAEEGEF-  194

Query  196  KGNAFMVAPRSTLSVEVNDSAVDRFYLYYVNDYGGHLELPFTCAQNQC  243
              ++ M++PRS  +V   +      YL Y+NDYGG+  L+F C  ++C
Sbjct  195  --ETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICNGSRC  238

147) SPAB_00254 in NC_010102


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (680),  Expect = 6e-48, Method: Compositional matrix adjust.
 Identities = 98/221 (45%), Positives = 157/221 (72%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASSRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   ++    +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFSCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

148) S70_12850 in NC_017731


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 6e-48, Method: Compositional matrix adjust.
 Identities = 102/241 (43%), Positives = 170/241 (71%), Gaps = 8/241 (3%)

Query  2    NKLYKGTVCLSFVFISVQTAFAAINIDRTRIIFPGQDKSVSLVINNQSKTLPYLAQSWME  61
            +K+  +++ L FV+ + +   AA+++DRTR +F G +KS++L I+N++K LPYLAQ+W+E
Sbjct  9    KKILMAAIPL-FVISGAD---AAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIE  64

Query  62   DDKGNKI-AEPFTVLPPMQRVEPNTKNQIKIIKTEAIDKLPQDRESLFYLNVREIPPVSN  120
            +++ +KI + P    PP+QR+EP +K+ +++  T  I KLPQDRESLFY+N+REIPP S+
Sbjct  65   NENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSE  124

Query  121  KENVVQIAIQSRLKMFYRPAQIENNSDKVWAKELKYTHSGNRLLIENPTKYYVT-LGYLS  179
            K NV+QIA+Q+++K+FYRPA I   ++ VW  +L     +    IENPT YYVT +G  +
Sbjct  125  KANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGG  184

Query  180  SNTTNNFPDFESVMIAPMSKESVTVPTTPFKQLYTGYMDDYGGMKMLTYQCAASVCQLAN  239
            S+   +  +FE+VM++P S ++V   ++ ++  Y +Y++DYGG  +L++ C +S C + +
Sbjct  185  SEKQAEEGEFETVMLSPRSEQTVK--SANYNTPYLSYINDYGGRPVLSFICNGSRCSVKK  242

Query  240  E  240
            E
Sbjct  243  E  243

149) yfcS in NC_012759


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 94/218 (44%), Positives = 155/218 (72%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-TSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI T+P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  KVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVP  208
            K   +  WQ+++ L + + ++ ++NPTPYYV +   ++  +    + F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQ  246
            ++    + P L+Y+ND+G+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

150) EcDH1_1320 in NC_017625


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 94/218 (44%), Positives = 155/218 (72%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-TSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI T+P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  KVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVP  208
            K   +  WQ+++ L + + ++ ++NPTPYYV +   ++  +    + F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQ  246
            ++    + P L+Y+ND+G+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

151) yfcS in NC_017638


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 94/218 (44%), Positives = 155/218 (72%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-TSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI T+P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  KVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVP  208
            K   +  WQ+++ L + + ++ ++NPTPYYV +   ++  +    + F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQ  246
            ++    + P L+Y+ND+G+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

152) mrfD in NC_017633


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 94/218 (44%), Positives = 155/218 (72%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-TSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI T+P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  KVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVP  208
            K   +  WQ+++ L + + ++ ++NPTPYYV +   ++  +    + F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQ  246
            ++    + P L+Y+ND+G+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

153) yfcS in NC_010473


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 94/218 (44%), Positives = 155/218 (72%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-TSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI T+P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  KVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVP  208
            K   +  WQ+++ L + + ++ ++NPTPYYV +   ++  +    + F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQ  246
            ++    + P L+Y+ND+G+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

154) yfcS in NC_020518


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 94/218 (44%), Positives = 155/218 (72%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-TSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI T+P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  KVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVP  208
            K   +  WQ+++ L + + ++ ++NPTPYYV +   ++  +    + F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQ  246
            ++    + P L+Y+ND+G+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

155) yfcS in NC_000913


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 94/218 (44%), Positives = 155/218 (72%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-TSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI T+P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  KVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVP  208
            K   +  WQ+++ L + + ++ ++NPTPYYV +   ++  +    + F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQ  246
            ++    + P L+Y+ND+G+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

156) yfcS in NC_007779


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 94/218 (44%), Positives = 155/218 (72%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-TSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI T+P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  KVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVP  208
            K   +  WQ+++ L + + ++ ++NPTPYYV +   ++  +    + F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQ  246
            ++    + P L+Y+ND+G+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

157) P12B_c2430 in NC_017663


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 94/218 (44%), Positives = 155/218 (72%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-TSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI T+P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  KVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVP  208
            K   +  WQ+++ L + + ++ ++NPTPYYV +   ++  +    + F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQ  246
            ++    + P L+Y+ND+G+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

158) SeAg_B0234 in NC_011149


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (678),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 98/221 (45%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

159) SeD_A0216 in NC_011205


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 98/221 (45%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

160) stfD in NC_011294


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  183 bits (679),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 98/221 (45%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

161) ECL_00372 in NC_014121


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 103/230 (45%), Positives = 173/230 (76%), Gaps = 6/230 (2%)

Query  1    MAACALSLVAGYAQAGVSLDRTRIIITEKEssssanlsntsPDIPFLAQSWVEDEKGNKI  60
            MAA +L +++G A+A+VSLDRTR ++   E S + ++SN + ++P+LAQ+W+E+E+ +KI
Sbjct  13   MAAIPLFVISG-ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKI  71

Query  61   -ASPLIVLPPLQRINGGQKGIARVTKTAGIEKLPKDRESLFYLNVREIPPKPEKPNTLQL  119
             ++P+I  PP+QR++ G K++ R++ T++I KLP+DRESLFY+N+REIPP++EK+N LQ+
Sbjct  72   ITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQI  131

Query  120  AMQSRIKLFYRPEAVIPKTKGEVWQDRVVFQKSGSEMTVQNPTPYYVTILSLTKGD-GVK  178
            A+Q++IKLFYRP A+  + + EVWQD+++++K ++   ++NPTPYYVT+++L  ++    
Sbjct  132  ALQTKIKLFYRPAAIKTRPN-EVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAE  190

Query  179  ITRFPGIMVAPKSSQTFAVTDAGVSQFSMKFVNDYGGHPELKFRCDGNTC  228
               F  +M++P+S QT  V  A  +   + ++NDYGG+P L F C+G+ C
Sbjct  191  EGEFETVMLSPRSEQT--VKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

162) ST548_p3593 in NC_020181


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 98/230 (43%), Positives = 165/230 (72%), Gaps = 10/230 (4%)

Query  20   LFFIAQINASWAGIALDRTRMIITGDARSVSANLTNTSPSIPFLAQSWVEDAHGTKI-TS  78
            LF I+  +A   +++LDRTR ++ G  +S++ +++N +  +P+LAQ+W+E+ +  KI T+
Sbjct  18   LFVISGADA---AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITG  74

Query  79   PLMVLPPLQRINGGQKGIARVTKTSGINALPQDRESLFYLNVREIPPKPDKPNVLQLAMQ  138
            P++  PP+QR++ G K++ R++ T++I+ LPQDRESLFY+N+REIPP+++K+NVLQ+A+Q
Sbjct  75   PVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQ  134

Query  139  SRIKLFYRPTAIVPETPGAVWQNQLIFHKQGQRWTVDNPTPYFVTLIGFSRKPEAQGGGR  198
            ++IKLFYRP+AI    P  VWQ+QLI++K +    ++NPTPY+VT+IG++        G 
Sbjct  135  TKIKLFYRPAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEG-  192

Query  199  LTDFPGIMIPPKSSLDFNVSDASVSQFSMMYVNDFGGHPELKFSCTGNVC  248
              +F  +M++P+S  +  V  A+ +   + Y+ND+GG+P L F C G+ C
Sbjct  193  --EFETVMLSPRS--EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

163) yfcS in NC_012971


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 92/216 (43%), Positives = 154/216 (72%), Gaps = 2/216 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSDKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  NTSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPATGFSPLVIEPKTTVP  208
            +T  +  WQ+++ L + + ++ ++NPTPYYV +   ++  +      F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFRCDGNTCQVDK  244
            ++    + P L+Y+ND+G+R  L F C+G+ C V K
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKK  242

164) yfcS in NC_012892


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 92/216 (43%), Positives = 154/216 (72%), Gaps = 2/216 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSDKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  NTSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPATGFSPLVIEPKTTVP  208
            +T  +  WQ+++ L + + ++ ++NPTPYYV +   ++  +      F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFRCDGNTCQVDK  244
            ++    + P L+Y+ND+G+R  L F C+G+ C V K
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKK  242

165) ECBD_1323 in NC_012947


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 92/216 (43%), Positives = 154/216 (72%), Gaps = 2/216 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSDKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  NTSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPATGFSPLVIEPKTTVP  208
            +T  +  WQ+++ L + + ++ ++NPTPYYV +   ++  +      F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFRCDGNTCQVDK  244
            ++    + P L+Y+ND+G+R  L F C+G+ C V K
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKK  242

166) yfcS in NC_012967


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 92/216 (43%), Positives = 154/216 (72%), Gaps = 2/216 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSDKPNTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  149  NTSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPATGFSPLVIEPKTTVP  208
            +T  +  WQ+++ L + + ++ ++NPTPYYV +   ++  +      F  +++ P++   
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMDSVPVLTYVNDFGARMPLFFRCDGNTCQVDK  244
            ++    + P L+Y+ND+G+R  L F C+G+ C V K
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKK  242

167) SEEB0189_18320 in NC_021844


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (673),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LP+DRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

168) SEEH1578_10105 in NC_021810


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LP+DRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

169) SU5_0846 in NC_017623


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LP+DRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

170) CFSAN002069_08160 in NC_021812


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LP+DRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

171) SeHA_C0233 in NC_011083


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LP+DRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

172) SNSL254_A0218 in NC_011080


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (673),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LP+DRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

173) SN31241_11910 in NC_021902


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (673),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  34   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  92
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  93   SAIGQVKIQGMPALASLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  152
            +A + V++   P ++ LP+DRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  153  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  212
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  213  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  253
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

174) stfD in NC_017046


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (673),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  34   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  92
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  93   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  152
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  153  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  212
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  213  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  253
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

175) stfD in NC_016857


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (673),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  34   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  92
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  93   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  152
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  153  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  212
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  213  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  253
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

176) PCC21_008540 in NC_018525


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 98/228 (43%), Positives = 168/228 (74%), Gaps = 8/228 (3%)

Query  17   LFLMPTAYSALSLDRTRVIFNDEEQSATVMLMNQNVENPFLAQSWLTDDRHNKV-TTPLM  75
            LF+++ A +A+SLDRTR +F++ E+S T+ + N+N + P+LAQ+W+ ++ ++K+ T P++
Sbjct  18   LFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVI  77

Query  76   VLPPLQRIEAKGYSLIRLVKTEQISQLPTDRESLFYLNVREIPPKTDKPNVLQIAIQSEI  135
              PP+QR+E+ + S++RL  T +IS+LP DRESLFY+N+REIPP+++K+NVLQIA+Q+ I
Sbjct  78   ATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKI  137

Query  136  KVFFRPRGVKPAKDEIWQEKLIVRKTGNTFQVENPTPYYITVSGILKQPKATRANPTSLL  195
            K+F+RP ++K   +E+WQ++LI+ K +  +++ENPTPYY+TV G+       +A+   + 
Sbjct  138  KLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGL--GGSEKQAEEGEF-  194

Query  196  KGNAFMVAPRSTLSVEVNDGAVDRFYLYYVNDYGGHLELPFTCAQNQC  243
              ++ M++PRS  +  V+ +  +  YL Y+NDYGG+  L+F C  ++C
Sbjct  195  --ETVMLSPRSEQT--VKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

177) SBOV01631 in NC_022241


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 98/221 (45%), Positives = 156/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TLPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASSRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   ++    +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

178) SE451236_07005 in NC_021820


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

179) SSPA0197 in NC_011147


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LP+DRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGRSPVLTYVNDYGARLPLIFNCTGNSCAVDEAK  246
            + +   +   +P L+Y+NDYG+R  L F C G+ C+V   K
Sbjct  207  VKSANYN---TPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

180) stfD in NC_006511


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LP+DRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGRSPVLTYVNDYGARLPLIFNCTGNSCAVDEAK  246
            + +   +   +P L+Y+NDYG+R  L F C G+ C+V   K
Sbjct  207  VKSANYN---TPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

181) stfD in NC_016856


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

182) STMMW_02031 in NC_016854


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

183) stfD in NC_003197


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

184) stfD in NC_016810


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

185) STMDT12_C01980 in NC_016860


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

186) STU288_00995 in NC_021151


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

187) stfD in NC_016863


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

188) yfcS in NC_011748


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

189) APECO78_15500 in NC_020163


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

190) yfcS in NC_011741


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

191) yfcS in NC_017660


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

192) EKO11_1429 in NC_016902


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

193) LY180_12100 in NC_022364


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

194) ECO103_2801 in NC_013353


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

195) O3M_07760 in NC_018650


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

196) O3O_17825 in NC_018661


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

197) O3K_07810 in NC_018658


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

198) ECSE_2646 in NC_011415


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

199) esoC in NC_017635


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

200) yfcS in NC_017664


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 96/218 (45%), Positives = 153/218 (71%), Gaps = 2/218 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  246
            ++    + P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

201) yfcS in NC_011750


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  180 bits (668),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKTGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP++ KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRKPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGPTAAGFKPLVMSPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K +  + F  +++SP++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMDSAPVLTYINDYGARLPLIFRCEGDTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G  C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

202) yfcS in NC_017646


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  180 bits (668),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKTGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP++ KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRKPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGPTAAGFKPLVMSPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K +  + F  +++SP++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMDSAPVLTYINDYGARLPLIFRCEGDTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G  C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

203) EcSMS35_2495 in NC_010498


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  180 bits (668),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKTGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP++ KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRKPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGPTAAGFKPLVMSPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K +  + F  +++SP++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMDSAPVLTYINDYGARLPLIFRCEGDTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G  C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

204) stfD in NC_006905


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  180 bits (668),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 96/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPAQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PP QR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LP+DRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

205) SbBS512_E2716 in NC_010658


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  180 bits (668),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 95/223 (43%), Positives = 157/223 (71%), Gaps = 2/223 (0%)

Query  25   SSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKI-SSPLAVLPPV  83
            +++A+V+ DRTR VF+ S+KS+++ + N++  LPYLAQ+WIE+ + +KI ++P+   PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  84   QRIDAMMNGQVKVQGLPDINKLPADRESVFYFNVREIPLKSNKPNTLQIALQTRIKLFWR  143
            QR+++  ++ V++   PDI+KLP DRES+FYFN+REIP +S+K+N LQIALQT+IKLF R
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  144  PKALENTSMKSPWQHKVTLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEP  203
            P A+ +T  +  WQ+++ L + + ++ ++NPTPYYV +   ++       + F  +M+ P
Sbjct  143  PAAI-KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSP  201

Query  204  KTSAPLNAKMDSVPVLTYINDYGARMPLYFKCTGNSCQVDEEQ  246
            ++   +++   + P L+YINDYG+R  L F C G+ C V  E+
Sbjct  202  RSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

206) yfcS in NC_013941


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  180 bits (668),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 156/221 (71%), Gaps = 2/221 (0%)

Query  27   QASVTPDRTRLIFNESDKSISVTLRNNDPKMPYLAQSWME-DGQGNRISSPLTVLPPVQR  85
            +A+V+ DRTR +F+ S+KS+++ + N++ ++PYLAQ+W+E + Q + I++P+   PPVQR
Sbjct  25   DAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQR  84

Query  86   IDSMMNGQVKVQGMPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPK  145
            +++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP 
Sbjct  85   LEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPA  144

Query  146  ALENVSMKNPWQHKVTLTRSGQEFTVNNPTPYFVVISNASAQKNGNPAAGFSPMVISPKT  205
            A+   + ++ WQ+++ L + +  + ++NPTPY+V +   ++  +    + F  +++SP++
Sbjct  145  AIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRS  203

Query  206  SVPLKVKMDSVPVLTYVNDYGARLPLFFRCTGNTCQVDEEQ  246
               +K    + P L+Y+NDYG+R  L F C G+ C V  E+
Sbjct  204  EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

207) ECO55CA74_14245 in NC_017656


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  180 bits (668),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 156/221 (71%), Gaps = 2/221 (0%)

Query  27   QASVTPDRTRLIFNESDKSISVTLRNNDPKMPYLAQSWME-DGQGNRISSPLTVLPPVQR  85
            +A+V+ DRTR +F+ S+KS+++ + N++ ++PYLAQ+W+E + Q + I++P+   PPVQR
Sbjct  25   DAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQR  84

Query  86   IDSMMNGQVKVQGMPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPK  145
            +++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP 
Sbjct  85   LEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPA  144

Query  146  ALENVSMKNPWQHKVTLTRSGQEFTVNNPTPYFVVISNASAQKNGNPAAGFSPMVISPKT  205
            A+   + ++ WQ+++ L + +  + ++NPTPY+V +   ++  +    + F  +++SP++
Sbjct  145  AIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRS  203

Query  206  SVPLKVKMDSVPVLTYVNDYGARLPLFFRCTGNTCQVDEEQ  246
               +K    + P L+Y+NDYG+R  L F C G+ C V  E+
Sbjct  204  EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

208) yfcS in NC_017644


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  180 bits (666),  Expect = 7e-47, Method: Compositional matrix adjust.
 Identities = 98/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  29   SVTPDRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRID  87
            +V+ DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR++
Sbjct  27   AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLE  86

Query  88   AMMNGQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKAL  147
            +  ++ V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+
Sbjct  87   PGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI  146

Query  148  EKIDMRKPWQFKVTLTRSGQDYIVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQ  207
             K      WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q
Sbjct  147  -KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ  205

Query  208  PLKAKMNSAPVLTYINDYGARLPLVFRCEGDTCKV  242
             +K+   ++P L+YINDYG+R  L F C+G  C V
Sbjct  206  TVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

209) ECSF_2213 in NC_013654


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  180 bits (666),  Expect = 7e-47, Method: Compositional matrix adjust.
 Identities = 98/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  29   SVTPDRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRID  87
            +V+ DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR++
Sbjct  27   AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLE  86

Query  88   AMMNGQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKAL  147
            +  ++ V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+
Sbjct  87   PGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI  146

Query  148  EKIDMRKPWQFKVTLTRSGQDYIVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQ  207
             K      WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q
Sbjct  147  -KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQ  205

Query  208  PLKAKMNSAPVLTYINDYGARLPLVFRCEGDTCKV  242
             +K+   ++P L+YINDYG+R  L F C+G  C V
Sbjct  206  TVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

210) ECP_2375 in NC_008253


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  180 bits (666),  Expect = 8e-47, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRKPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

211) yfcS in NC_017631


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (664),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

212) yfcS in NC_004431


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (664),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

213) yfcS in NC_017652


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (664),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

214) yfcS in NC_017651


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (664),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

215) PC1_0824 in NC_012917


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (664),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 96/234 (42%), Positives = 166/234 (71%), Gaps = 8/234 (3%)

Query  17   LFLMPSAYSALSLDRTRVIFNDEEQSATVMLMNQNAEHPFLAQSWLTDDRHNKV-NTPLM  75
            LF++++A +A+SLDRTR +F++ E+S T+ + N+N + P+LAQ+W+ ++ ++K+   P++
Sbjct  18   LFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVI  77

Query  76   VLPPLQRIEAKGYSLIRLVKTEQISQLPADRESLFYLNVREIPPKTDKPNVLQIAIQSEI  135
              PP+QR+E+ + S++RL  T +IS+LP DRESLFY+N+REIPP+++K+NVLQIA+Q+ I
Sbjct  78   ATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKI  137

Query  136  KVFFRPRGVKPAKDEIWQEKLTIRKTGNTFQVENPTPYYITVSDILKQPKATRANPTSLL  195
            K+F+RP ++K   +E+WQ++L + K +  +++ENPTPYY+TV ++    K +        
Sbjct  138  KLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFE--  195

Query  196  KGKAFMIAPRSTLPVAVNDGAIDRFYLYYVNDYGGHLELPFTCVQNQCQPTIHK  249
               + M++PRS    +V+ +  +  YL Y+NDYGG+  L+F C  ++C    +K
Sbjct  196  ---TVMLSPRSEQ--TVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

216) yfcS in NC_008563


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (662),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 96/215 (45%), Positives = 151/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNTEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+  +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

217) ECOK1_2618 in NC_017628


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (662),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 96/215 (45%), Positives = 151/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNTEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+  +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

218) papD_2 in NC_022370


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (662),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 96/215 (45%), Positives = 151/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNTEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+  +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

219) yfcS in NC_011742


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (662),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 96/215 (45%), Positives = 151/215 (71%), Gaps = 2/215 (0%)

Query  80   DRTRLVFNESDKSISVTLRNNTEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  138
            DRTR VF+ S+KS+++ + N+  +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  139  GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  198
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  199  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  258
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  259  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  293
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

220) UM146_05130 in NC_017632


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (662),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 96/215 (45%), Positives = 151/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNTEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+  +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

221) yfcS in NC_007946


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (662),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 96/215 (45%), Positives = 151/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNTEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+  +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

222) stfD in NC_011274


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (665),  Expect = 8e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVCEIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+ EIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

223) stfD in NC_022221


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (665),  Expect = 8e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVCEIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+ EIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

224) stfD in NC_016831


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (665),  Expect = 8e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVCEIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+ EIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

225) I137_00950 in NC_021984


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  179 bits (665),  Expect = 8e-47, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  27   IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEP  85
            ++ DRTR VF G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  86   SAIGQVKIQGMPALASLPQDRETLFYYNVCEIPPQSDKPNTLQIALQTRIKVFYRPQALS  145
            +A + V++   P ++ LPQDRE+LFY+N+ EIPP+S+K+N LQIALQT+IK+FYRP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-  146

Query  146  KIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVT  205
            K   ++ WQ ++ L++ + GY++ NPT YYV +   +     +    F  ++++P+S+ T
Sbjct  147  KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  206  LGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  246
            + +      ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  207  VKSANY---NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

226) LF82_370 in NC_011993


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KLASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

227) NRG857_11830 in NC_017634


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 97/215 (46%), Positives = 152/215 (71%), Gaps = 2/215 (0%)

Query  33   DRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKI-TSPLAVLPPVQRIDAMMN  91
            DRTR VF+ S+KS+++ + N+N +LPYLAQ+W+E+E+ +KI T+P+   PPVQR+++  +
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   GQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKID  151
            + V++ + PDI  LP DRESLFY+N+REIPP+S KAN LQIALQT+IKLF RP A+ K  
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTR  149

Query  152  MRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKA  211
                WQ ++ L + + +Y ++NPTPY V + + +   K    + F  ++++P++ Q +K+
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKS  209

Query  212  KLASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQ  246
               ++P L+YINDYG+R  L F C+G+ C V  ++
Sbjct  210  ANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

228) SeAg_B3090 in NC_011149


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

229) SBOV29961 in NC_022241


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

230) stfD in NC_006905


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

231) CFSAN002050_21110 in NC_021818


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

232) SeD_A3271 in NC_011205


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

233) SEN2796 in NC_011294


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

234) SG2861 in NC_011274


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

235) SPUCDC_2945 in NC_022221


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPTAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

236) SPUL_2959 in NC_016831


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPTAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

237) SEEH1578_00795 in NC_021810


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

238) SU5_03438 in NC_017623


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

239) CFSAN002069_17485 in NC_021812


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

240) SeHA_C3154 in NC_011083


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

241) SNSL254_A3173 in NC_011080


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

242) SN31241_40610 in NC_021902


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

243) steC in NC_012125


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

244) I137_14075 in NC_021984


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPTAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

245) SPAB_03672 in NC_010102


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 102/249 (41%), Positives = 174/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGSSLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+++  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

246) ECH74115_3479 in NC_011353


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 155/221 (71%), Gaps = 2/221 (0%)

Query  27   QASVTPDRTRLIFNESDKSISVTLRNNDPKMPYLAQSWME-DGQGNRISSPLTVLPPVQR  85
            +A+V+ DRTR +F+ S+KS+++ + N++ ++PYLAQ+W+E + Q + I++P+   PPVQR
Sbjct  25   DAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQR  84

Query  86   IDSMMNGQVKVQGMPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPK  145
            +++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP 
Sbjct  85   LEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPA  144

Query  146  ALENVSMKNPWQHKVTLTLSGQEFTVNNPTPYFVVISNASAQKNGNPAAGFSPMVISPKT  205
            A+   + ++ WQ+++ L   +  + ++NPTPY+V +   ++  +    + F  +++SP++
Sbjct  145  AIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRS  203

Query  206  SVPLKVKMDSVPVLTYVNDYGARLPLFFRCTGNTCQVDEEQ  246
               +K    + P L+Y+NDYG+R  L F C G+ C V  E+
Sbjct  204  EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

247) yfcS in NC_002655


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 155/221 (71%), Gaps = 2/221 (0%)

Query  27   QASVTPDRTRLIFNESDKSISVTLRNNDPKMPYLAQSWME-DGQGNRISSPLTVLPPVQR  85
            +A+V+ DRTR +F+ S+KS+++ + N++ ++PYLAQ+W+E + Q + I++P+   PPVQR
Sbjct  25   DAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQR  84

Query  86   IDSMMNGQVKVQGMPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPK  145
            +++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP 
Sbjct  85   LEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPA  144

Query  146  ALENVSMKNPWQHKVTLTLSGQEFTVNNPTPYFVVISNASAQKNGNPAAGFSPMVISPKT  205
            A+   + ++ WQ+++ L   +  + ++NPTPY+V +   ++  +    + F  +++SP++
Sbjct  145  AIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRS  203

Query  206  SVPLKVKMDSVPVLTYVNDYGARLPLFFRCTGNTCQVDEEQ  246
               +K    + P L+Y+NDYG+R  L F C G+ C V  E+
Sbjct  204  EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

248) ECs3220 in NC_002695


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 155/221 (71%), Gaps = 2/221 (0%)

Query  27   QASVTPDRTRLIFNESDKSISVTLRNNDPKMPYLAQSWME-DGQGNRISSPLTVLPPVQR  85
            +A+V+ DRTR +F+ S+KS+++ + N++ ++PYLAQ+W+E + Q + I++P+   PPVQR
Sbjct  25   DAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQR  84

Query  86   IDSMMNGQVKVQGMPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPK  145
            +++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP 
Sbjct  85   LEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPA  144

Query  146  ALENVSMKNPWQHKVTLTLSGQEFTVNNPTPYFVVISNASAQKNGNPAAGFSPMVISPKT  205
            A+   + ++ WQ+++ L   +  + ++NPTPY+V +   ++  +    + F  +++SP++
Sbjct  145  AIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRS  203

Query  206  SVPLKVKMDSVPVLTYVNDYGARLPLFFRCTGNTCQVDEEQ  246
               +K    + P L+Y+NDYG+R  L F C G+ C V  E+
Sbjct  204  EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

249) yfcS in NC_013008


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 155/221 (71%), Gaps = 2/221 (0%)

Query  27   QASVTPDRTRLIFNESDKSISVTLRNNDPKMPYLAQSWME-DGQGNRISSPLTVLPPVQR  85
            +A+V+ DRTR +F+ S+KS+++ + N++ ++PYLAQ+W+E + Q + I++P+   PPVQR
Sbjct  25   DAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQR  84

Query  86   IDSMMNGQVKVQGMPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPK  145
            +++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP 
Sbjct  85   LEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPA  144

Query  146  ALENVSMKNPWQHKVTLTLSGQEFTVNNPTPYFVVISNASAQKNGNPAAGFSPMVISPKT  205
            A+   + ++ WQ+++ L   +  + ++NPTPY+V +   ++  +    + F  +++SP++
Sbjct  145  AIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRS  203

Query  206  SVPLKVKMDSVPVLTYVNDYGARLPLFFRCTGNTCQVDEEQ  246
               +K    + P L+Y+NDYG+R  L F C G+ C V  E+
Sbjct  204  EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

250) CDCO157_2985 in NC_017906


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 155/221 (71%), Gaps = 2/221 (0%)

Query  27   QASVTPDRTRLIFNESDKSISVTLRNNDPKMPYLAQSWME-DGQGNRISSPLTVLPPVQR  85
            +A+V+ DRTR +F+ S+KS+++ + N++ ++PYLAQ+W+E + Q + I++P+   PPVQR
Sbjct  25   DAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQR  84

Query  86   IDSMMNGQVKVQGMPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPK  145
            +++  ++ V++   PDI+KLP DRES+FYFN+REIPP+S+K+N LQIALQT+IKLF RP 
Sbjct  85   LEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPA  144

Query  146  ALENVSMKNPWQHKVTLTLSGQEFTVNNPTPYFVVISNASAQKNGNPAAGFSPMVISPKT  205
            A+   + ++ WQ+++ L   +  + ++NPTPY+V +   ++  +    + F  +++SP++
Sbjct  145  AIKTRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRS  203

Query  206  SVPLKVKMDSVPVLTYVNDYGARLPLFFRCTGNTCQVDEEQ  246
               +K    + P L+Y+NDYG+R  L F C G+ C V  E+
Sbjct  204  EQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

251) yfcS in NC_008258


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  177 bits (655),  Expect = 6e-46, Method: Compositional matrix adjust.
 Identities = 93/212 (44%), Positives = 150/212 (71%), Gaps = 2/212 (0%)

Query  30   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  88
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  89   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  148
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  149  NVSMKNPWQYKVTLTRNGQEFTVNNPTSYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAP  208
              + ++ WQ ++ L + +  + ++NPT+YYV     +   +    + F  +++SP++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  209  LNVKMGSVPVLTYVNDYGARMPLFFTCNGNSC  240
            ++    + P L+Y+NDYG+R  L F CNG+ C
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

252) SEEB0189_05370 in NC_021844


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  177 bits (655),  Expect = 6e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 173/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + ++++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKGNETASG-FKNLLIAPREKVTSPIKGASLGSSPVVSYVDDYGGHRLLVFTCSG  238
            +   G+  +++  G F  ++++PR   T  +K+A+  ++P +SY++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

253) SSPA2621 in NC_011147


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  177 bits (654),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 173/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + + ++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

254) steC in NC_006511


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  177 bits (654),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 173/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + + ++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

255) steC in NC_003198


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  177 bits (654),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 173/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + + ++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

256) STBHUCCB_30120 in NC_016832


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  177 bits (654),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 173/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + + ++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

257) TY21A_14455 in NC_021176


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  177 bits (654),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 173/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + + ++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

258) steC in NC_004631


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  177 bits (654),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 173/249 (70%), Gaps = 7/249 (2%)

Query  1    MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ  60
            M K + + ++ L+A++ L     +++A+  DRTR +F+G+E+S+T+ + N+N  LPYLAQ
Sbjct  1    MWKLSMIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ  60

Query  61   AWLEDDKFAKD-TRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIP  119
            AW+E+++  K  T    A PP+QR+EP + + V++   P  + LPQDRESLFYFN+REIP
Sbjct  61   AWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP  120

Query  120  PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLV  179
            P+S+K+N LQ+ALQT+IK+FYRP A+  + +    WQ +L L   ++G  ++NPTP+Y+ 
Sbjct  121  PRSEKANVLQIALQTKIKLFYRPAAIKTRPNEV--WQDQLILNKVSGGYRIENPTPYYVT  178

Query  180  ISNAGSKENETASG-FKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSG  238
            +   G+ E+++  G F  ++++PR   T  +K+A+  ++P ++Y++DYGG+ +L F C+G
Sbjct  179  VIGLGGSEKQAEEGEFETVMLSPRSEQT--VKSANY-NTPYLSYINDYGGRPVLSFICNG  235

Query  239  NTCKVNEEK  247
            + C V+ EK
Sbjct  236  SRCSVKKEK  244

259) SSON53_13965 in NC_016822


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  175 bits (647),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 91/210 (44%), Positives = 147/210 (70%), Gaps = 2/210 (0%)

Query  2    IFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDSMMNGQVKV  60
            +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++  ++ V++
Sbjct  36   VFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRL  95

Query  61   QGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALENVSMKNPW  120
               PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+   + ++ W
Sbjct  96   STTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP-NEVW  154

Query  121  QYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAPLNVKMGSV  180
            Q ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   ++    + 
Sbjct  155  QDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNT  214

Query  181  PVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  210
            P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  215  PYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

260) yfcS in NC_007384


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  175 bits (647),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 91/210 (44%), Positives = 147/210 (70%), Gaps = 2/210 (0%)

Query  2    IFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDSMMNGQVKV  60
            +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++  ++ V++
Sbjct  36   VFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRL  95

Query  61   QGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALENVSMKNPW  120
               PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+   + ++ W
Sbjct  96   STTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRP-NEVW  154

Query  121  QYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAPLNVKMGSV  180
            Q ++ L + +  + ++NPTPYYV     +   +    + F  +++SP++   ++    + 
Sbjct  155  QDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNT  214

Query  181  PVLTYVNDYGARMPLFFTCNGNSCQVDEEQ  210
            P L+Y+NDYG+R  L F CNG+ C V  E+
Sbjct  215  PYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

261) EcE24377A_2631 in NC_009801


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 93/218 (43%), Positives = 150/218 (69%), Gaps = 2/218 (0%)

Query  21   VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKI-SSPLTVLPPVQRIDS  79
            V+ DRTR +F+ S+KS+++ + N++ +LPYLAQ+WIE+E+ +KI ++P+   PPVQR+++
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  80   MMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALE  139
              ++ V++   PDI+KLP DRESLFYFN+REIPP+S+KAN LQIALQT+IKLF RP A+ 
Sbjct  88   GAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIK  147

Query  140  NVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASAEKNGNPAAGFSPLVLLPKTSAP  199
              + ++ WQ ++ L + +  + ++NPTPYYV     ++  +    + F  ++L P++   
Sbjct  148  TRP-NEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT  206

Query  200  LGVKMDSVPVLTYVNDFDARMPLFFKCTGNTCQVDEEH  237
            +     + P L+Y+ND+++R  L F C G+ C V  E 
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

262) CFSAN001921_16420 in NC_021814


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  174 bits (645),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 92/213 (44%), Positives = 149/213 (70%), Gaps = 5/213 (2%)

Query  1    MFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKI-TSPLIVVPPVQRIEPSAIGQVKI  59
            +F G +KS+++D+ N N +LPYLAQ+W+E+E+  KI T+P+I  PPVQR+EP+A + V++
Sbjct  36   VFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRL  95

Query  60   QGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPW  119
               P ++ LPQDRE+LFY+N+REIPP+S+K+N LQIALQT+IK+FYRP A+ K   ++ W
Sbjct  96   STTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI-KTRPNEVW  154

Query  120  QYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVTLGGDASEL  179
            Q ++ L++ + GY++ N T YYV +   +     +    F  ++++P+S+ T+ +     
Sbjct  155  QDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANY--  212

Query  180  GHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAK  212
             ++P L+Y+NDYG+R  L F C ++ C+V   K
Sbjct  213  -NTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

263) M621_24570 in NC_021659


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  174 bits (645),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 109/218 (50%), Positives = 161/218 (74%), Gaps = 5/218 (2%)

Query  33   DRTRVIFDGGQNSVSLNISNQNKQLPYLAQAWLEDGEGNKV-QSplvvlppvQRVEPGKP  91
            DRTR +FDG+++S++L+ISN+NKQLPYLAQAW+E+ + +K+  +P++  PPVQR+EPG  
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   SQVKIQALPAAKQLPQDRETLYYFNLREIPPKSDKPNTLQIALQTRIKLFYRpaaiapqq  151
            S V++ + P   +LPQDRE+L+YFNLREIPP+S+K+N LQIALQT+IKLFYR +A    +
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR-PAAIKTR  149

Query  152  naapwqEQLTLTKQGDKYQVNNSTPYYITIIDAASKKGVEGVKGFEPLMVPPKGNIslgv  211
                WQ+QL L K ++ Y+++N+TPYY+T+I+ ++         FE +M++P+++     
Sbjct  150  PNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSE---QT  206

Query  212  saaalggapvlTYINDYGGRPQLTFNCSGSTCQVVPEK  249
              +A   +P L+YINDYGGRP L+F C+GS C V  EK
Sbjct  207  VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

264) yfcS in NC_016816


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  172 bits (635),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 99/223 (45%), Positives = 156/223 (70%), Gaps = 7/223 (3%)

Query  34   PTAHAALTVDRSRLIFNEDDKSISVNVTNRSTKDPYLAQGWIEDSNEKKI-TNIMMVLPP  92
            + A+AA+++DR+R +F+  +KS++++++N + + PYLAQ+WIE+ N+ KI T  ++  PP
Sbjct  22   SGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPP  81

Query  93   VQRVEAGAKTQVRIQGLPDIKTLPKDRESVFYFNLREIPPKSEKANTLMLAMQTRLKVFY  152
            VQR+E+GAK+ VR+   PDI  LP+DRES+FYFNLREIPP+SEKAN L +A+QT++K+FY
Sbjct  82   VQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFY  141

Query  153  RPVSIKVAPALDAVPGVKDLTLTRKNNKYIVNNPTPYYFSFVEGRTSETSSGVKDFEPVM  212
            RP +IK  P  + V    +L L + +  Y ++NPTPYY + +    SE  +   +FE VM
Sbjct  142  RPAAIKTRP--NEVWQ-DQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVM  198

Query  213  VEPKSKLSLPVLASVLGNSPVLMFVNDYGSQRLISFSCQENIC  255
            + P+S      + S   N+P L ++NDYG++ ++SF C+ + C
Sbjct  199  LSPRSE---QTVKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

265) yfcS in NC_017531


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  170 bits (629),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 95/228 (42%), Positives = 160/228 (71%), Gaps = 7/228 (3%)

Query  21   NAHGALTVDRSRLILNQGEKSISLNVTNRNEKDPYLAQGWME-DVDGKKISGPLMVLPPV  79
             A++A+++DR+R +++ +EKS++L+++N N + PYLAQ+W+E + + K I+GP++  PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  80   QRVEAGGKTLVRIQVLPAISSLPTDRESVFYLNLREIPPKSAKANVLTLAMQIRLKVFYR  139
            QR+E+G+K++VR+   P IS LP DRES+FY+NLREIPP+S KANVL +A+Q ++K+FYR
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  140  PKGLNVDPMSDTVPGTETLTLIKQGNQYEVHNPTPYHFSFVEVRRSLTGSGLARFEPVMV  199
            P +++  P        + L L K +  Y ++NPTPY  + + +  S   +  + FE VM+
Sbjct  143  PAAIKTRPNEVW---QDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVML  199

Query  200  APKSRQLLSPTVSELGSTPVLMFVSDYGSQRLLPFICNGNTCQAEKSR  247
            +P+S Q + ++  +   TP L +++DYG++ +L+FICNG+ C   K +
Sbjct  200  SPRSEQTVKSANYN---TPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

266) yfcS in NC_013956


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  170 bits (629),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 95/228 (42%), Positives = 160/228 (71%), Gaps = 7/228 (3%)

Query  21   NAHGALTVDRSRLILNQGEKSISLNVTNRNEKDPYLAQGWMEDVDGKKI-SGPLMVLPPV  79
             A++A+++DR+R +++ +EKS++L+++N N + PYLAQ+W+E+ +  KI +GP++  PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  80   QRVEAGGKTLVRIQVLPAISSLPTDRESVFYLNLREIPPKSAKANVLTLAMQIRLKVFYR  139
            QR+E+G+K++VR+   P IS LP DRES+FY+NLREIPP+S KANVL +A+Q ++K+FYR
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  140  PKGLNVDPMSDTVPGTETLTLIKQGNQYEVHNPTPYHFSFVEVRRSLTGSGLARFEPVMV  199
            P +++  P        + L L K +  Y ++NPTPY  + + +  S   +  + FE VM+
Sbjct  143  PAAIKTRPNEVW---QDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVML  199

Query  200  APKSRQLLSPTVSELGSTPVLMFVSDYGSQRLLPFICNGNTCQAEKSR  247
            +P+S Q + ++  +   TP L +++DYG++ +L+FICNG+ C   K +
Sbjct  200  SPRSEQTVKSANYN---TPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

267) PAGR_g1307 in NC_017554


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  170 bits (629),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 95/228 (42%), Positives = 160/228 (71%), Gaps = 7/228 (3%)

Query  21   NAHGALTVDRSRLILNQGEKSISLNVTNRNEKDPYLAQGWME-DVDGKKISGPLMVLPPV  79
             A++A+++DR+R +++ +EKS++L+++N N + PYLAQ+W+E + + K I+GP++  PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  80   QRVEAGGKTLVRIQVLPAISSLPTDRESVFYLNLREIPPKSAKANVLTLAMQIRLKVFYR  139
            QR+E+G+K++VR+   P IS LP DRES+FY+NLREIPP+S KANVL +A+Q ++K+FYR
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  140  PKGLNVDPMSDTVPGTETLTLIKQGNQYEVHNPTPYHFSFVEVRRSLTGSGLARFEPVMV  199
            P +++  P        + L L K +  Y ++NPTPY  + + +  S   +  + FE VM+
Sbjct  143  PAAIKTRPNEVW---QDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVML  199

Query  200  APKSRQLLSPTVSELGSTPVLMFVSDYGSQRLLPFICNGNTCQAEKSR  247
            +P+S Q + ++  +   TP L +++DYG++ +L+FICNG+ C   K +
Sbjct  200  SPRSEQTVKSANYN---TPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

268) PANA5342_1334 in NC_016816


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  170 bits (629),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 95/228 (42%), Positives = 160/228 (71%), Gaps = 7/228 (3%)

Query  21   NAHGALTVDRSRLILNQGEKSISLNVTNRNEKDPYLAQGWME-DVDGKKISGPLMVLPPV  79
             A++A+++DR+R +++ +EKS++L+++N N + PYLAQ+W+E + + K I+GP++  PPV
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  80   QRVEAGGKTLVRIQVLPAISSLPTDRESVFYLNLREIPPKSAKANVLTLAMQIRLKVFYR  139
            QR+E+G+K++VR+   P IS LP DRES+FY+NLREIPP+S KANVL +A+Q ++K+FYR
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYR  142

Query  140  PKGLNVDPMSDTVPGTETLTLIKQGNQYEVHNPTPYHFSFVEVRRSLTGSGLARFEPVMV  199
            P +++  P        + L L K +  Y ++NPTPY  + + +  S   +  + FE VM+
Sbjct  143  PAAIKTRPNEVW---QDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVML  199

Query  200  APKSRQLLSPTVSELGSTPVLMFVSDYGSQRLLPFICNGNTCQAEKSR  247
            +P+S Q + ++  +   TP L +++DYG++ +L+FICNG+ C   K +
Sbjct  200  SPRSEQTVKSANYN---TPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

269) W5S_0952 in NC_017845


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  168 bits (622),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 165/228 (73%), Gaps = 8/228 (3%)

Query  17   LFLIPSAYSTLSLDRTRVIFNDEEQSATVMLMNPNAEHPILAHSWLTDDQHNKV-TTPLM  75
            LF+I++A +++SLDRTR +F++ E+S T+ + N N + P LA++W+ +++++K+ T P++
Sbjct  18   LFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVI  77

Query  76   VLPPLQRIEAKGYSLTRLVKTEQITQLPTDRESLFYLNVREILPKTEKVNVLQIAIQSEI  135
              PP+QR+E+ + S+ RL  T +I++LP DRESLFY+N+REI P++EK NVLQIA+Q+ I
Sbjct  78   ATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKI  137

Query  136  KVFFRPRGVKPGKDEIWQKKLLIKKTGNTFQVENPTPYYITVSSILKQPKTTHAKPANLL  195
            K+F+RP ++K   +E+WQ +L+++K +  +++ENPTPYY+TV ++       +A  +++ 
Sbjct  138  KLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGL--GGSEKQAEEGEF-  194

Query  196  KRNAFMVAPRSTLSVEVNNGAINHFYLYYVNDHGAYVPLPFTCAQNQC  243
              ++ M++PRS  +  V+++  N  YL Y+ND G+   L+F C  ++C
Sbjct  195  --ETVMLSPRSEQT--VKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

270) Pecwa_1058 in NC_013421


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  168 bits (622),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 165/228 (73%), Gaps = 8/228 (3%)

Query  17   LFLIPSAYSTLSLDRTRVIFNDEEQSATVMLMNPNAEHPILAHSWLTDDQHNKV-TTPLM  75
            LF+I++A +++SLDRTR +F++ E+S T+ + N N + P LA++W+ +++++K+ T P++
Sbjct  18   LFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVI  77

Query  76   VLPPLQRIEAKGYSLTRLVKTEQITQLPTDRESLFYLNVREILPKTEKVNVLQIAIQSEI  135
              PP+QR+E+ + S+ RL  T +I++LP DRESLFY+N+REI P++EK NVLQIA+Q+ I
Sbjct  78   ATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKI  137

Query  136  KVFFRPRGVKPGKDEIWQKKLLIKKTGNTFQVENPTPYYITVSSILKQPKTTHAKPANLL  195
            K+F+RP ++K   +E+WQ +L+++K +  +++ENPTPYY+TV ++       +A  +++ 
Sbjct  138  KLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGL--GGSEKQAEEGEF-  194

Query  196  KRNAFMVAPRSTLSVEVNNGAINHFYLYYVNDHGAYVPLPFTCAQNQC  243
              ++ M++PRS  +  V+++  N  YL Y+ND G+   L+F C  ++C
Sbjct  195  --ETVMLSPRSEQT--VKSANYNTPYLSYINDYGGRPVLSFICNGSRC  238

271) sbbB in NC_015761


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  167 bits (617),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 168/232 (73%), Gaps = 3/232 (1%)

Query  15   VGFTLLNSNIVNAAINVDRTRIVMGGEDKSLAVTLTNQSKSQPYLAQSWIDDAS-EKRSE  73
             ++ L+  +  +AA+++DRTR V +G +KS+++ ++N++K  PYLAQ+WI++ + EK   
Sbjct  14   AAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIIT  73

Query  74   SYLLVLPPLQRIDAGKKAQVRIVALPGTASLAKDRETLFYFNVREIPPKSDKENILQIAL  133
            + ++  PP+QR+++G K+ VR+ + P+ + L++DRE+LFYFN+REIPP+S+K N+LQIAL
Sbjct  74   GPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIAL  133

Query  134  QSRLKLFYRPDGIKKNASERSEEKVTVTRHNDKLVINNPTPYYITLGYLGDDNKGSFPG-  192
            Q+++KLFYRP +IK  ++E  ++++ + + ++   I+NPTPYY+T+  LG+ +K +  G 
Sbjct  134  QTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGE  193

Query  193  FDSLMIAPFSSQDFHAKWHGDTLQVGYIDDFGGLHINQYHCAGSLCSLKGKK  244
            F+++M++P S Q   +  + +T  ++YI+D+GG  +  + C GS CS+K  K
Sbjct  194  FETVMLSPRSEQTVKSA-NYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK  244

272) MU9_86 in NC_020418


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  164 bits (606),  Expect = 4e-42, Method: Compositional matrix adjust.
 Identities = 101/217 (47%), Positives = 154/217 (71%), Gaps = 7/217 (3%)

Query  29   DRTRVIYNEGDKAVPLTVTNEHLSKPYLAQSWIENSTGQKI-TSPVFVTPPVQRIEPDRK  87
            DRTR +++ ++K++ L ++N++   PYLAQ+WIEN   +KI T+PV+ TPPVQR+EP+ K
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  88   SQIKVQLSPEAASLPADRESVFYLNVREIPPAVEKSNVLQIALQTKIKLFYRPKAIQVQE  147
            S +++  +P+ + LP DRES+FY+N+REIPP  EK+NVLQIALQTKIKLFYRP AI+   
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKT--  148

Query  148  RMEKIAGADGIRLSQNGGQYTIENTTPYHLSVTRLDATG--GKEVKFEPVMVspkasasf  205
            R + +   D + L++ +G Y IEN TPY ++V  L+++   + E  FE VM+SP++  + 
Sbjct  149  RPNEVW-QDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  206  sapaLGNAPVVYYVNDYGDTKPLKFSCAGSSCTVQSD  242
             ++   N+P + Y+NDYG+   L F C GS C+V+ +
Sbjct  208  KSANY-NTPYLSYINDYGGRPVLSFICNGSRCSVKKE  243

273) Entcl_3858 in NC_014618


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  160 bits (592),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 154/223 (70%), Gaps = 7/223 (3%)

Query  20   NAQAAVNADRTRVIMNGNEKTVSVTLTNENKTMPFLAQSWVDDSNGRR--SSMLMVLPPL  77
             A+AAV+ DRTR + +G+EK++++ ++N+NK +P+LAQ+W+++ N  +  ++ ++  PP+
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  78   QRVDGGQKTQVRIMQVQGTGLDKLPADRETLFWFNVREIPPEPETTNVLQLALQSRLKLF  137
            QR++ G K+ VR+      ++ KLP DRE+LF FN+REIPP +E +NVLQ+ALQ+++KLF
Sbjct  83   QRLEPGAKSMVRL--STTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLF  140

Query  138  YRPVAIKKGSNDTSEKKLTVEREGGKLVLKNPTPYHITLAWLGTTRRERLEGFSEGVMVS  197
            YRP AIK  +N+  + +L +++ +G   + NPTPY +T+  LG + ++  EG  E VM+S
Sbjct  141  YRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLS  200

Query  198  PLSTLPVKAILPAGSTRLWVGYVDDYGGLQMNQYTCNAQRCAM  240
            P S   VK+   A      ++Y++DYGG  +  + CN+ RC++
Sbjct  201  PRSEQTVKS---ANYNTPYLSYINDYGGRPVLSFICNGSRCSV  240

274) ybgP in NC_012759


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  157 bits (578),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 169/238 (72%), Gaps = 11/238 (4%)

Query  3    FIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKG  62
            ++ ++PL +++   G +AAV  DRTR VF++++K+ +L I N++ +LPYLA +WIENE+ 
Sbjct  12   LMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  63   EKS-DALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSD  121
            EK   + ++A PP+QRLEP A S VR+   +  ++LP DRE+LF++N+REIPP ++K++ 
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN-  127

Query  122  HAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRN  181
              +LQ+A+Q++IKLF RPAA++ ++ E  + QL +++ +    + NPT+YY+T+  LG +
Sbjct  128  --VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  182  EKGVLPG-FKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSG-QCRLQ  237
            EK    G F TVM++P S    ++++Y+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

275) EcDH1_2919 in NC_017625


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  157 bits (578),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 169/238 (72%), Gaps = 11/238 (4%)

Query  3    FIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKG  62
            ++ ++PL +++   G +AAV  DRTR VF++++K+ +L I N++ +LPYLA +WIENE+ 
Sbjct  12   LMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  63   EKS-DALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSD  121
            EK   + ++A PP+QRLEP A S VR+   +  ++LP DRE+LF++N+REIPP ++K++ 
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN-  127

Query  122  HAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRN  181
              +LQ+A+Q++IKLF RPAA++ ++ E  + QL +++ +    + NPT+YY+T+  LG +
Sbjct  128  --VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  182  EKGVLPG-FKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSG-QCRLQ  237
            EK    G F TVM++P S    ++++Y+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

276) ybgP in NC_017638


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  157 bits (578),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 169/238 (72%), Gaps = 11/238 (4%)

Query  3    FIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKG  62
            ++ ++PL +++   G +AAV  DRTR VF++++K+ +L I N++ +LPYLA +WIENE+ 
Sbjct  12   LMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  63   EKS-DALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSD  121
            EK   + ++A PP+QRLEP A S VR+   +  ++LP DRE+LF++N+REIPP ++K++ 
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN-  127

Query  122  HAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRN  181
              +LQ+A+Q++IKLF RPAA++ ++ E  + QL +++ +    + NPT+YY+T+  LG +
Sbjct  128  --VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  182  EKGVLPG-FKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSG-QCRLQ  237
            EK    G F TVM++P S    ++++Y+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

277) ETEC_0729 in NC_017633


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  157 bits (578),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 169/238 (72%), Gaps = 11/238 (4%)

Query  3    FIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKG  62
            ++ ++PL +++   G +AAV  DRTR VF++++K+ +L I N++ +LPYLA +WIENE+ 
Sbjct  12   LMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  63   EKS-DALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSD  121
            EK   + ++A PP+QRLEP A S VR+   +  ++LP DRE+LF++N+REIPP ++K++ 
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN-  127

Query  122  HAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRN  181
              +LQ+A+Q++IKLF RPAA++ ++ E  + QL +++ +    + NPT+YY+T+  LG +
Sbjct  128  --VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  182  EKGVLPG-FKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSG-QCRLQ  237
            EK    G F TVM++P S    ++++Y+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

278) ybgP in NC_010473


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  157 bits (578),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 169/238 (72%), Gaps = 11/238 (4%)

Query  3    FIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKG  62
            ++ ++PL +++   G +AAV  DRTR VF++++K+ +L I N++ +LPYLA +WIENE+ 
Sbjct  12   LMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  63   EKS-DALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSD  121
            EK   + ++A PP+QRLEP A S VR+   +  ++LP DRE+LF++N+REIPP ++K++ 
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN-  127

Query  122  HAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRN  181
              +LQ+A+Q++IKLF RPAA++ ++ E  + QL +++ +    + NPT+YY+T+  LG +
Sbjct  128  --VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  182  EKGVLPG-FKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSG-QCRLQ  237
            EK    G F TVM++P S    ++++Y+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

279) ybgP in NC_020518


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  157 bits (578),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 169/238 (72%), Gaps = 11/238 (4%)

Query  3    FIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKG  62
            ++ ++PL +++   G +AAV  DRTR VF++++K+ +L I N++ +LPYLA +WIENE+ 
Sbjct  12   LMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  63   EKS-DALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSD  121
            EK   + ++A PP+QRLEP A S VR+   +  ++LP DRE+LF++N+REIPP ++K++ 
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN-  127

Query  122  HAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRN  181
              +LQ+A+Q++IKLF RPAA++ ++ E  + QL +++ +    + NPT+YY+T+  LG +
Sbjct  128  --VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  182  EKGVLPG-FKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSG-QCRLQ  237
            EK    G F TVM++P S    ++++Y+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

280) ybgP in NC_000913


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  157 bits (578),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 169/238 (72%), Gaps = 11/238 (4%)

Query  3    FIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKG  62
            ++ ++PL +++   G +AAV  DRTR VF++++K+ +L I N++ +LPYLA +WIENE+ 
Sbjct  12   LMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  63   EKS-DALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSD  121
            EK   + ++A PP+QRLEP A S VR+   +  ++LP DRE+LF++N+REIPP ++K++ 
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN-  127

Query  122  HAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRN  181
              +LQ+A+Q++IKLF RPAA++ ++ E  + QL +++ +    + NPT+YY+T+  LG +
Sbjct  128  --VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  182  EKGVLPG-FKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSG-QCRLQ  237
            EK    G F TVM++P S    ++++Y+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

281) ybgP in NC_007779


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  157 bits (578),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 169/238 (72%), Gaps = 11/238 (4%)

Query  3    FIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKG  62
            ++ ++PL +++   G +AAV  DRTR VF++++K+ +L I N++ +LPYLA +WIENE+ 
Sbjct  12   LMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  63   EKS-DALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSD  121
            EK   + ++A PP+QRLEP A S VR+   +  ++LP DRE+LF++N+REIPP ++K++ 
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN-  127

Query  122  HAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRN  181
              +LQ+A+Q++IKLF RPAA++ ++ E  + QL +++ +    + NPT+YY+T+  LG +
Sbjct  128  --VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  182  EKGVLPG-FKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSG-QCRLQ  237
            EK    G F TVM++P S    ++++Y+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

282) P12B_c0687 in NC_017663


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  157 bits (578),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 169/238 (72%), Gaps = 11/238 (4%)

Query  3    FIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKG  62
            ++ ++PL +++   G +AAV  DRTR VF++++K+ +L I N++ +LPYLA +WIENE+ 
Sbjct  12   LMAAIPLFVIS---GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQ  68

Query  63   EKS-DALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSD  121
            EK   + ++A PP+QRLEP A S VR+   +  ++LP DRE+LF++N+REIPP ++K++ 
Sbjct  69   EKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN-  127

Query  122  HAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRN  181
              +LQ+A+Q++IKLF RPAA++ ++ E  + QL +++ +    + NPT+YY+T+  LG +
Sbjct  128  --VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS  185

Query  182  EKGVLPG-FKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSG-QCRLQ  237
            EK    G F TVM++P S    ++++Y+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  186  EKQAEEGEFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

283) A464_295 in NC_021870


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  155 bits (570),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 152/208 (74%), Gaps = 3/208 (1%)

Query  2    GGEDKSLAVTLTNQSKSQPYLAQSWIDDAS-EKRSESYLLVLPPLQRIDAGKKAQVRIVA  60
            +G +KS+++ ++N++K  PYLAQ+WI++ + EK   + ++  PP+QR+++G K+ VR+ +
Sbjct  38   DGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLST  97

Query  61   LPGTASLAKDRETLFYFNVREIPPKSDKENILQIALQSRLKLFYRPDGIKKNASERSEEK  120
             P+ + L++DRE+LFYFN+REIPP+S+K N+LQIALQ+++KLFYRP +IK  ++E  +++
Sbjct  98   TPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQ  157

Query  121  VTVTRHNDKLVINNPTPYYITLGYLGDDNKGSFPG-FDSLMIAPFSSQDFHAKWHGDTLQ  179
            + + + ++   I+NPTPYY+T+  LG+ +K +  G F+++M++P S Q   +  + +T  
Sbjct  158  LILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSA-NYNTPY  216

Query  180  VGYIDDFGGLHINQYHCAGSLCSLKGKK  207
            ++YI+D+GG  +  + C GS CS+K  K
Sbjct  217  LSYINDYGGRPVLSFICNGSRCSVKKEK  244

284) ybgP in NC_011748


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (553),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  33   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  91
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  151
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  152  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  210
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  211  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  245
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

285) ybgP in NC_011741


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (553),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  33   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  91
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  92   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  151
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  152  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  210
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  211  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  245
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

286) APECO78_07110 in NC_020163


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

287) EcE24377A_0743 in NC_009801


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

288) ybgP in NC_017660


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

289) EKO11_3162 in NC_016902


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

290) LY180_03790 in NC_022364


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

291) ybgP in NC_013353


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

292) ybgP in NC_013364


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

293) ECSE_0776 in NC_011415


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

294) ybgP in NC_017635


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

295) ybgP in NC_017664


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

296) SbBS512_E0634 in NC_010658


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

297) ybgP in NC_017328


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

298) ybgP in NC_004741


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

299) ybgP in NC_004337


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

300) ybgP in NC_008258


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

301) SSON53_03575 in NC_016822


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

302) ybgP in NC_007384


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  150 bits (552),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 153/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGNYSGSQFYLGYMDDYGALRMTTLNCSG-QCHLQ  237
            +++NY+ +  YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

303) Entcl_0711 in NC_014618


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  149 bits (550),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 158/232 (69%), Gaps = 7/232 (3%)

Query  13   LFGVCGIAHATVSPDKTRIVFNASDKSVSVRLTNQSKTEPYLAQSWIEDINGKKT-RDFI  71
            LF + G A+A+VS D+TR VF++S+KS+++ ++N++K  PYLAQ+WIE+ N  K   + +
Sbjct  18   LFVISG-ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPV  76

Query  72   SPLPPMMRIEPGEQAQVRLMGQPTLAQLPQDRETLFYYNMREIPPKPQEKNVMQIAMQSR  131
             + PP+ R+EPG ++ VRL   P +++LPQDRE+LFY+N+REIPP+++  NV+QIA+Q++
Sbjct  77   IATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTK  136

Query  132  MKLFWRPKAIVLKEGQLLPLEKVALSRTATELTLNNPTPYHMTVGYLGTNGKTLMPGA-E  190
            +KLF RP AI  +  ++   +++ L++ +    ++NPTPY +TV  LG + K    G  E
Sbjct  137  IKLFYRPAAIKTRPNEVWQ-DQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFE  195

Query  191  SIMVAPFSKASEKLKNLPAQFQIGFISDYGGLEMMKVSCNSVQTTCQSTPEK  242
            ++M++P S  + K  N  + + +++I+DYGG  ++   CN+  + C    EK
Sbjct  196  TVMLSPRSEQTVKSANYNTPY-LSYINDYGGRPVLSFICNG--SRCSVKKEK  244

304) EcolC_2938 in NC_010468


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  148 bits (545),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 89/216 (42%), Positives = 152/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGSYSGSQFYLGYMDDYGALRMTMLNCSG-QCHLQ  237
            ++++Y+ +  YL+Y++DYG+  +  + C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

305) ybgP in NC_012971


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 89/216 (42%), Positives = 152/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTAKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVFPG-FKTVMIAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGSYSGSQFYLGYMDDYGALRMTTLNCSGE-CRLQ  237
            ++++Y+ +  YL+Y++DYG+  + ++ C+G  C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

306) ybgP in NC_012892


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 89/216 (42%), Positives = 152/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTAKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVFPG-FKTVMIAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGSYSGSQFYLGYMDDYGALRMTTLNCSGE-CRLQ  237
            ++++Y+ +  YL+Y++DYG+  + ++ C+G  C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

307) ECBD_2944 in NC_012947


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 89/216 (42%), Positives = 152/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTAKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVFPG-FKTVMIAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGSYSGSQFYLGYMDDYGALRMTTLNCSGE-CRLQ  237
            ++++Y+ +  YL+Y++DYG+  + ++ C+G  C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

308) ybgP in NC_012967


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 89/216 (42%), Positives = 152/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTAKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVFPG-FKTVMIAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGSYSGSQFYLGYMDDYGALRMTTLNCSGE-CRLQ  237
            ++++Y+ +  YL+Y++DYG+  + ++ C+G  C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

309) UMNK88_753 in NC_017641


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  148 bits (545),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 89/216 (42%), Positives = 152/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTAKLPGDRETLFFYNMREIPPAPEKNSGHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVFPG-FKTVMIAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGSYSGSQFYLGYMDDYGALRMTTLNCSGE-CRLQ  237
            ++++Y+ +  YL+Y++DYG+  + ++ C+G  C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

310) ECL_04374 in NC_014121


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  148 bits (545),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 152/235 (65%), Gaps = 10/235 (4%)

Query  11   LFCGSGVSQAAINLDRTRIVFAESDKASSLTIENQSKSLPYLALAWVE-DRDGRKEDTHF  69
            LF  SG ++AA++LDRTR VF  S+K+ +L I N++K LPYLA AW+E + + +      
Sbjct  18   LFVISG-ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPV  76

Query  70   MVLPPIQRIEPGASSQVRIVKQAATQQLPEDRETLFYFNLREVPPKSGSLKEERSVMQVA  129
            +  PP+QR+EPGA S VR+   +   +LP+DRE+LFYFNLRE+PP+S    E  +V+Q+A
Sbjct  77   IATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRS----EKANVLQIA  132

Query  130  MQSRIKLFWRPESIRKKAGEETEMQLSVTLSGKTMRLKNPTPYFITLAWLSNNGKTMMPG  189
            +Q++IKLF RP +I+ ++ E  + QL +   +   R+ NPTPY++T+  L+ + K    G
Sbjct  133  LQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEG  192

Query  190  -FDSLMISPFAtstltlsetegtgYSIGYIDDYGALRKVNLTCTGSTPCTLTPRK  243
             F+++M+SP  +     S    T Y ++YI+DYG+   +++ C GS  C++   K
Sbjct  193  EFETVMLSP-RSEQTVKSANYNTPY-LSYINDYGGRPVLSFICNGS-RCSVKKEK  244

311) ybgP in NC_011751


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 88/216 (41%), Positives = 152/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTAKLPGDRETLFFYNMREIPPSPEKNSGHAVLQVAIQSRIKVFWRPSALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RP+A++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLNLKNPTGYYLTIAYLGRNEQGVLPG-FKTVMVAPFSTVIT  202
             ++ E  + QL +++ +    + NPT YY+T+  LG +E+    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGSYSGSQFYLGYMDDYGALRMTTLNCNG-HCRLQ  237
            ++++Y+ +  YL+Y++DYG+  + ++ CNG +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

312) EcHS_A0765 in NC_009800


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  147 bits (541),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 88/216 (41%), Positives = 152/216 (71%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTAKLPGDRETLFFYNIREVPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+RE+PP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NTGSYSGSQFYLGYMDDYGALRMTMLNCSG-QCHLQ  237
            ++++Y+ +  YL+Y++DYG+  +  + C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

313) EFER_2398 in NC_011740


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  146 bits (537),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 166/248 (67%), Gaps = 13/248 (5%)

Query  1    MSLIKEKTMTICKGMFLILLTTSLYSHAALQPDRTRIVFDANNKATSLRVENRSDKLPYL  60
            +S+I+ K +     +F+I   ++  ++AA+  DRTR VFD+++K+ +L + N + +LPYL
Sbjct  4    LSMIRKKILMAAIPLFVI---SG--ADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYL  58

Query  61   AYSWIENEKGEKS-DDLLVALPPIQRLEPKATSQVRIVKQASTTQLPADRETLFYYNLRE  119
            A +WIENE+ EK   + ++A PP+QRLEP A S VR+   +  ++LP DRE+LFY+NLRE
Sbjct  59   AQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLRE  118

Query  120  IPPAPDKNNDHAVLQVAVQSRIKLFWRPAALRKKTGDHVEqqlqvnqqnnqlIMKNPTPY  179
            IPP ++K N   VLQ+A+Q++IKLF RPAA++ +  +  ++QL +N+ +    + NPTPY
Sbjct  119  IPPRSEKAN---VLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPY  175

Query  180  YLTIAYLGRDVKGVLPG-FKSMMIAPFSTASTATGNYTGNQFYLGYMDDYGALRMNTLKC  238
            Y+T+  LG   K    G F ++M++P S  +  ++NY     YL+Y++DYG+  + ++ C
Sbjct  176  YVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTP--YLSYINDYGGRPVLSFIC  233

Query  239  QGE-CRLQ  245
            +G  C ++
Sbjct  234  NGSRCSVK  241

314) EC042_0734 in NC_017626


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  145 bits (533),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 150/216 (70%), Gaps = 8/216 (3%)

Query  27   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  85
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  86   TQVRIVKQVSTTKLPGDRETLFFYNMREIPPAPEKNSGHAVLQVAIQSRIKVFWRPSALR  145
            + VR+      +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RP+A++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  146  KKAGEKVELQLQVSQQGNQLNLKNPTGYYLTIAYLGRNEQGILPG-FKTVMVAPFSTVIT  204
             ++ E  + QL +++ +    + NPT YY+T+  LG +E+    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  205  NTGSYSGRQFYLGYMDDYGALRMTTLNCSG-QCRLQ  239
            ++++Y+    YL+Y++DYG+  + ++ C+G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

315) ybgP in NC_013361


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  144 bits (530),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 89/216 (42%), Positives = 151/216 (70%), Gaps = 8/216 (3%)

Query  25   DRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKS-DDLLVALPPIQRLEPKAT  83
            DRTR VF++++K+ +L + N + +LPYLA +W+ENE+ EK   + ++A PP+QRLEP A 
Sbjct  31   DRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAK  90

Query  84   TQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALR  143
            + VR+   +  +KLP DRE+LF++N+REIPP +EK +   VLQ+A+Q++IK+F RPAA++
Sbjct  91   SMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKAN---VLQIALQTKIKLFYRPAAIK  147

Query  144  KKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPG-FKTVMVAPFSTVNT  202
             ++ E  + QL +++ +    + NPT+YY+T+  LG +EK    G F TVM++P S    
Sbjct  148  TRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTV  207

Query  203  NIGNYSGSQFYLGYMDDYGALRMTTLNYSG-QCHLQ  237
            + +NY+ +  YL+Y++DYG+  + ++  +G +C ++
Sbjct  208  KSANYNTP--YLSYINDYGGRPVLSFICNGSRCSVK  241

316) ECL_04370 in NC_014121


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 151/222 (69%), Gaps = 10/222 (4%)

Query  22   ATVSPDRTRIIFNASAKSVSVRLINQSKTDPYLAQSWIE-DKAGKKTREFISPVPPLLRI  80
            A+VS DRTR +F++S KS+++ + N++K  PYLAQ+WIE ++  K     + + PP+ R+
Sbjct  26   AAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL  85

Query  81   EPEEQAQVRLMAQQNLSRLPADRESLFYYNMREIPPKAEQKNVMQIAMQSRLKLFWRPKA  140
            EP  ++ VRL +  ++S+LP DRESLFY+N+REIPP++E+ NV+QIA+Q+++KLF RP A
Sbjct  86   EPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAA  145

Query  141  IELKEGQFVPLDKVVISRASGTLQFKNSSPYYITVGYIGLNGKTLLPGA---ESVMIEPF  197
            I  +  + V  D++++++ SG  ++ N++PYY+TV  IGL G    +     E+VM+ P 
Sbjct  146  IKTRPNE-VWQDQLILNKVSGGYRIENPTPYYVTV--IGLGGSEKQAEEGEFETVMLSPR  202

Query  198  GQASQSLAKLPAEFQVGYISDYGGLEMFKVSCNAVQPACQSK  239
            ++ +   A+  + + ++YI+DYGG  ++   CN+ +  C  K
Sbjct  203  SEQTVKSANYNTPY-LSYINDYGGRPVLSFICNGSR--CSVK  241

317) Entas_3722 in NC_015968


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  137 bits (504),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 80/183 (44%), Positives = 130/183 (72%), Gaps = 6/183 (3%)

Query  19   NTHAAINLDRTRIVFPESDKASSLKFDNQSKTLPYLALSWIEDENGRKE-DSHFMALPPI  77
             ++AA++LDRTR VF  S+K+ +L + N++K LPYLA +WIE+EN  K   +  +A PP+
Sbjct  23   GADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPV  82

Query  78   QRIEAGASSQVRIVKQAAVSQLPKDRESLFYFNLREVPPKSSSVSDERSVMQVAMQSRIK  137
            QR+E+GA S VR+   + +S+LP+DRESLFYFNLRE+PP+    S+  +V+Q+A+Q++IK
Sbjct  83   QRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPR----SEKANVLQIALQTKIK  138

Query  138  LFWRPKTITKKPGDQAEMRMEISATAKGLTVRNPTPYYITIAWLSKNAKTLLPG-FDSLM  196
            LF RP +I  +P +  + ++ ++  + G  + NPTPYY+T+  L+ + K    G F+++M
Sbjct  139  LFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVM  198

Query  197  IAP  199
            ++P
Sbjct  199  LSP  201

318) NH44784_062511 in NC_021285


> NC_008563_P4|14|G13|117625206|YP_854253.1|Escherichia_coli_APEC_O1|-|14319..15053|papD|APECO1_3522|pilus 
assembly protein 
chaperone PapD
Length=244

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 91/220 (42%), Positives = 153/220 (70%), Gaps = 13/220 (5%)

Query  25   VNVDRTRIIMGSNQKSVSVVLSNESHDTPYLAQAWIEDADGKTI--SDLVALPPLQRIDG  82
            V++DRTR + ++++KS+++ +SN++ + PYLAQAWIE+ +   I  + ++A PP+QR++ 
Sbjct  28   VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP  87

Query  83   GKKAQVRIMRANDAFTARLPQDRETLFYFNVREIPPEPPKTDANILQLTTQSRLKLLLRP  142
            G K+ VR+  + D   ++LPQDRE+LFYFN+REIPP + K  AN+LQ++ Q+++KL+ RP
Sbjct  88   GAKSMVRLSTTPD--ISKLPQDRESLFYFNLREIPPRSEK--ANVLQIALQTKIKLFYRP  143

Query  143  AAL-GKSDEVNPERSLQIQARGNSLTLKNPTPYYVTVIWLGRDVKQPLPG-FDNAPMLAP  200
            AA+  +++EV  ++ L ++  + +  + NPTPYYVTVI LG   KQ+  G F+   ML+P
Sbjct  144  AAIKTRPNEVWQDQ-LILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETV-MLSP  201

Query  201  FSEQEVKATLPPDVGELVLGNVDDYGGLRMNRYRCAAGQC  240
             SEQ VK++   +     L+ ++DYGG  +  + C +++C
Sbjct  202  RSEQTVKSA---NYNTPYLSYINDYGGRPVLSFICNGSRC  238