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Homologs of SSP0054 gene of NC_007350_R2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SSP0054
( YP_300144.1 )

type I site-specific restriction-modification system restriction subunit

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

0.0

100

2) A284_00465
( YP_007383868.1 )

type I site-specific restriction-modification system restriction subunit

NC_020164
(Staphylococcus warneri SG1)

0.0

3) C248_0187
( YP_006708949.1 )

type I restriction enzyme

NC_018608
(Staphylococcus aureus 08BA02176)

0.0

4) hsdR
( YP_005756652.1 )

type-1 restriction enzyme R protein

NC_017351
(Staphylococcus aureus 11819-97)

0.0

5) hsdR
( YP_008484213.1 )

type I restriction-modification enzyme, R subunit

NC_022222
(Staphylococcus aureus 6850)

0.0

6) ST398NM01_0213
( YP_006194358.1 )

Type I restriction-modification system restriction subunit

NC_017673
(Staphylococcus aureus 71193)

0.0

7) hsdR
( YP_008167355.1 )

Type-1 restriction enzyme R protein

NC_021670
(Staphylococcus aureus Bmb9393)

0.0

8) M013TW_0183
( YP_005296651.1 )

Type I restriction-modification system,restriction subunit R

NC_016928
(Staphylococcus aureus M013)

0.0

9) SAR0196
( YP_039661.1 )

type I restriction enzyme

NC_002952
(Staphylococcus aureus MRSA252)

0.0

10) SAS0170
( YP_042292.1 )

type I restriction enzyme

NC_002953
(Staphylococcus aureus MSSA476)

0.0

11) hsdR
( NP_644984.1 )

type I restriction enzyme restriction chain

NC_003923
(Staphylococcus aureus MW2)

0.0

12) SA40_0160
( YP_008586807.1 )

putative type I restriction enzyme

NC_022443
(Staphylococcus aureus SA40)

0.0

13) SA957_0175
( YP_008584273.1 )

putative type I restriction enzyme

NC_022442
(Staphylococcus aureus SA957)

0.0

14) SAT0131_00189
( YP_005751471.1 )

Type-1 restriction enzyme R protein

NC_017347
(Staphylococcus aureus T0131)

0.0

15) hsdR
( YP_005746385.1 )

type I restriction-modification system subunit R

NC_017342
(Staphylococcus aureus TCH60)

0.0

16) SATW20_02050
( YP_005730227.1 )

putative type I restriction enzyme

NC_017331
(Staphylococcus aureus TW20)

0.0

17) SARLGA251_01660
( YP_005754176.1 )

putative type I restriction enzyme

NC_017349
(Staphylococcus aureus LGA251)

0.0

18) hsdR
( YP_005740945.1 )

Type I restriction-modification system, restriction subunit R

NC_017340
(Staphylococcus aureus 04-02981)

0.0

19) SAAG_00677
( YP_008448189.1 )

type-1 restriction enzyme R protein

NC_022113
(Staphylococcus aureus 55/2053)

0.0

20) hsdR
( YP_008127088.1 )

type-1 restriction enzyme R protein

NC_021554
(Staphylococcus aureus CA-347)

0.0

21) SAKOR_00175
( YP_008490359.1 )

Type I restriction-modification system restriction subunit

NC_022226
(Staphylococcus aureus CN1)

0.0

22) SACOL0180
( YP_185079.1 )

type I restriction-modification enzyme, R subunit

NC_002951
(Staphylococcus aureus COL)

0.0

23) hsdR
( YP_005748910.1 )

type I site-specific deoxyribonuclease, HsdR family protein

NC_017343
(Staphylococcus aureus ECT-R 2)

0.0

24) hsdR
( YP_492910.1 )

type I restriction-modification enzyme, R subunit

NC_007793
(Staphylococcus aureus FPR3757)

0.0

25) SaurJH1_0185
( YP_001315334.1 )

HsdR family type I site-specific deoxyribonuclease

NC_009632
(Staphylococcus aureus JH1)

0.0

26) SaurJH9_0180
( YP_001245563.1 )

HsdR family type I site-specific deoxyribonuclease

NC_009487
(Staphylococcus aureus JH9)

0.0

27) BN843_1990
( YP_007867278.1 )

Type I restriction-modification system,restriction subunit R

NC_021059
(Staphylococcus aureus M1)

0.0

28) hsdR
( YP_001440784.1 )

type I restriction enzyme restriction chain

NC_009782
(Staphylococcus aureus Mu3)

0.0

29) hsdR
( NP_370719.1 )

type I restriction enzyme restriction chain

NC_002758
(Staphylococcus aureus Mu50)

0.0

30) hsdR
( NP_373432.1 )

type I restriction enzyme restriction protein

NC_002745
(Staphylococcus aureus N315)

0.0

31) SAOUHSC_00162
( YP_498760.1 )

HsdR family type I site-specific deoxyribonuclease

NC_007795
(Staphylococcus aureus NCTC 8325)

0.0

32) hsdR
( YP_001331174.1 )

type-I restriction-modification system restriction endonuclease subunit

NC_009641
(Staphylococcus aureus Newman)

0.0

33) hsdR
( YP_007582754.1 )

Type-1 restriction enzyme R protein

NC_020536
(Staphylococcus aureus ST228)

0.0

34) hsdR
( YP_007620468.1 )

Type-1 restriction enzyme R protein

NC_020566
(Staphylococcus aureus ST228)

0.0

35) hsdR
( YP_007622455.1 )

Type-1 restriction enzyme R protein

NC_020568
(Staphylococcus aureus ST228)

0.0

36) SAI1T1_2001440
( YP_007576767.1 )

Type I site-specific deoxyribonuclease, HsdR family

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

0.0

37) SAI2T2_1001440
( YP_007618482.1 )

Type I site-specific deoxyribonuclease, HsdR family

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

0.0

38) SAI3T3_1001440
( YP_007578775.1 )

Type I site-specific deoxyribonuclease, HsdR family

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

0.0

39) SAI4T8_1001440
( YP_007580739.1 )

Type I site-specific deoxyribonuclease, HsdR family

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

0.0

40) hsdR
( YP_007584718.1 )

Type-1 restriction enzyme R protein

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

0.0

41) SAPIG0213
( YP_005733023.1 )

type I site-specific deoxyribonuclease, HsdR family subfamily, putative

NC_017333
(Staphylococcus aureus ST398)

0.0

42) hsdR2
( YP_001574118.1 )

type I site-specific deoxyribonuclease restriction subunit

NC_010079
(Staphylococcus aureus TCH1516)

0.0

43) hsdR
( YP_005743564.1 )

type-I restriction-modification system restriction endonuclease subunit

NC_017341
(Staphylococcus aureus JKD6008)

0.0

44) SAOV_0140
( YP_005735658.1 )

type I restriction-modification enzyme, R subunit

NC_017337
(Staphylococcus aureus ED133)

0.0

45) SAAV_0163
( YP_003281114.1 )

type I restriction-modification enzyme, R subunit

NC_013450
(Staphylococcus aureus ED98)

0.0

46) SAEMRSA15_01600
( YP_006236532.1 )

putative type I restriction enzyme

NC_017763
(Staphylococcus aureus HO 5096 0412)

0.0

47) SAB0135
( YP_415646.1 )

type I restriction enzyme restriction chain

NC_007622
(Staphylococcus aureus RF122)

0.0

48) SAA6159_00176
( YP_005738342.1 )

type-I restriction-modification system restriction endonuclease subunit

NC_017338
(Staphylococcus aureus JKD6159)

0.0

49) SAMSHR1132_01700
( YP_005324692.1 )

putative type I restriction enzyme

NC_016941
(Staphylococcus aureus MSHR1132)

0.0

50) hsdR
( YP_190017.1 )

type I restriction-modification system, R subunit

NC_002976
(Staphylococcus epidermidis RP62A)

0.0

51) SLGD_00655
( YP_003470930.1 )

type I restriction-modification system, restriction subunit R

NC_013893
(Staphylococcus lugdunensis HKU09-01)

0.0

52) SLUG_06530
( YP_005759776.1 )

putative type I restriction enzyme

NC_017353
(Staphylococcus lugdunensis N920143)

0.0

53) CLK_1539
( YP_001787476.1 )

type I site-specific deoxyribonuclease HsdR family subfamily

NC_010520
(Clostridium botulinum Loch Maree)

0.0

54) Mvol_0317
( YP_003706950.1 )

type I site-specific deoxyribonuclease, HsdR family

NC_014222
(Methanococcus voltae A3)

0.0

55) hsdR
( YP_004888888.1 )

type I restriction-modification system,restriction subunit

NC_004567
(Lactobacillus plantarum WCFS1)

0.0

56) Lp16_0758
( YP_008120596.1 )

type I restriction-modification system,restriction subunit

NC_021514
(Lactobacillus plantarum 16)

0.0

57) hsdR
( YP_003924065.1 )

type I site-specific deoxyribonuclease, HsdR subunit

NC_014554
(Lactobacillus plantarum ST-III)

0.0

58) hsdR
( YP_007413669.1 )

Type I restriction-modification system,restriction subunit

NC_020229
(Lactobacillus plantarum ZJ316)

0.0

59) Ilyop_2857
( YP_003968954.1 )

type I site-specific deoxyribonuclease, HsdR family

NC_014634
(Ilyobacter polytropus DSM 2926)

0.0

60) HSDR
( NP_907319.1 )

hypothetical protein

NC_005090
(Wolinella succinogenes DSM 1740)

0.0

61) Mbur_1841
( YP_566474.1 )

HsdR family type I site-specific deoxyribonuclease

NC_007955
(Methanococcoides burtonii DSM 6242)

0.0

62) hsdR
( YP_007321972.1 )

type I restriction enzyme, R subunit

NC_020054
(Fibrella aestuarina BUZ 2)

0.0

63) hsdR2
( YP_008074863.1 )

type I restriction-modification system R subunit HsdR2

NC_021355
(Methanobrevibacter sp. AbM4)

0.0

64) Saut_1342
( YP_003892402.1 )

HsdR family type I site-specific deoxyribonuclease

NC_014506
(Sulfurimonas autotrophica DSM 16294)

0.0

65) Q7A_2153
( YP_006296612.1 )

type I restriction-modification system, restriction subunit R

NC_017857
(Methylophaga sp. JAM1)

0.0

66) Runsl_3894
( YP_004657382.1 )

HsdR family type I site-specific deoxyribonuclease

NC_015703
(Runella slithyformis DSM 19594)

0.0

67) Cycma_3305
( YP_004775260.1 )

HsdR family type I site-specific deoxyribonuclease

NC_015914
(Cyclobacterium marinum DSM 745)

0.0

68) Galf_1412
( YP_003847201.1 )

HsdR family type I site-specific deoxyribonuclease

NC_014394
(Gallionella capsiferriformans ES-2)

0.0

69) MI1_06800
( YP_005174768.1 )

type I site-specific deoxyribonuclease, HsdR subunit

NC_016805
(Leuconostoc mesenteroides J18)

0.0

70) ZPR_0882
( YP_003583428.1 )

type III restriction enzyme, res subunit

NC_014041
(Zunongwangia profunda SMA-87)

0.0

71) A7H1H_0910
( YP_008330844.1 )

type I restriction-modification system, R subunit

NC_021878
(Arcobacter butzleri 7h1h)

0.0

72) Dfer_5242
( YP_003089602.1 )

HsdR family type I site-specific deoxyribonuclease

NC_013037
(Dyadobacter fermentans DSM 18053)

0.0

73) Oscil6304_2205
( YP_007085759.1 )

HsdR family type I site-specific deoxyribonuclease

NC_019693
(Oscillatoria acuminata PCC 6304)

0.0

74) Pcar_0897
( YP_006716612.1 )

type I restriction-modification system, restriction subunit

NC_007498
(Pelobacter carbinolicus DSM 2380)

0.0

75) EUS_10110
( YP_007775121.1 )

type I site-specific deoxyribonuclease, HsdR family

NC_021011
(Eubacterium siraeum 70/3)

1e-180

76) Echvi_4436
( YP_007226629.1 )

HsdR family type I site-specific deoxyribonuclease

NC_019904
(Echinicola vietnamensis DSM 17526)

2e-180

77) hsdR
( YP_005320618.1 )

HsdR family type I site-specific deoxyribonuclease

NC_016940
(Saprospira grandis Lewin)

4e-180

78) hsdR
( YP_211471.1 )

type I restriction enzyme R protein

NC_003228
(Bacteroides fragilis NCTC 9343)

1e-179

79) hsdR
( YP_004865573.1 )

putative type I restriction enzyme R protein

NC_016026
(Micavibrio aeruginosavorus ARL-13)

6e-179

80) EGYY_11950
( YP_004710761.1 )

hypothetical protein

NC_015738
(Eggerthella sp. YY7918)

3e-178

81) Msp_0477
( YP_447520.1 )

type I restriction-modification system, restriction subunit

NC_007681
(Methanosphaera stadtmanae DSM 3091)

9e-177

82) Celal_0832
( YP_004163659.1 )

type i site-specific deoxyribonuclease, hsdr family

NC_014934
(Cellulophaga algicola DSM 14237)

7e-175

83) Krodi_2315
( YP_004431561.1 )

HsdR family type I site-specific deoxyribonuclease

NC_015496
(Krokinobacter sp. 4H-3-7-5)

2e-174

84) MASE_18490
( YP_006749740.1 )

HsdR family type I site-specific deoxyribonuclease

NC_018632
(Alteromonas macleodii ATCC 27126)

1e-171

85) hsdR
( YP_679928.1 )

type I restriction-modification system R subunit

NC_008255
(Cytophaga hutchinsonii ATCC 33406)

3e-171

86) Entcl_0678
( YP_003940237.1 )

HsdR family type I site-specific deoxyribonuclease

NC_014618
(Enterobacter cloacae SCF1)

8e-167

87) hsdR2
( YP_007986398.1 )

Type I site-specific deoxyribonuclease, HsdR subunit

NC_021224
(Lactobacillus plantarum P-8)

1e-164

88) hsdR
( YP_004994448.1 )

HsdR protein chain

NC_016603
(Acinetobacter calcoaceticus PHEA-2)

4e-158

• Sequence Alignments

1) SSP0054 in NC_007350


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1487 bits (5643),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 930/930 (100%), Positives = 930/930 (100%), Gaps = 0/930 (0%)

Query  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60
            MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120
            RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180
            ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240
            YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300
            MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360
            DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420
            KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480
            LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540
            ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600
            GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660
            FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720
            FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780
            LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840
            ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900
            IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYSS  930
            LVGDKKLREKRQTKKAVTSFVEEVSEKYSS
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYSS  930

2) A284_00465 in NC_020164


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1289 bits (4891),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 771/931 (83%), Positives = 888/931 (96%), Gaps = 2/931 (0%)

Query  1    MAYQNEFSLEKEMMAQLSSNGYETVSIKNDTQLLENFRTILNERHADKLNGQPLTDKEFQ  60
            M YQ+EF+LE EMM QL SNGYETV+I+N+ QLL+NFR+ILNERHADKLNG+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMINGKGIFESARILRDKLPLKRDDESEVYLSFLDTVNWCKNKFQVTNQVSVEDTYK  120
            RLLTMINGKGIFESARILRDK+PLKRDDESEVYLSFLDT +WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGVDINEAFNQVMRYRKQNYTGLFRYIQMFIISNGIETR  180
            ARYDVTILINGLPLVQ+ELKRRG+DINEAFNQVMRYRKQNYTGLFRYIQ+FIISNGI+TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YISNNDGEIYKSHMFYWSDKHNQRINTLSDFTESFLRPCHLAKMISRYMIINETDKVLMA  240
            YISNNDGEIYKSHMFYWSDK+N+RINTL++FTE+FLRPCH+AKMISRYMI+NETD++LMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVHAVEALIHQATETANNGYIWHTTGSGKTLTSFKSSQVLSEQDNIKKVIFLVDRK  300
            MRPYQVHAVEALIHQATET+NNGYIWHTTGSGKTLTSFK+SQVLSEQD+IKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFSKGAVDKTNNTAQLVRQLNDKSLPLIVTTIQKMSKAIQNNAEALEQY  360
            DLDSQTEEEFNKFSKG+VDKTNNTAQLV+QL+DKSLPLIVTTIQKMSKAIQNNAEAL+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENRSQDGRSTADIFGKC  420
            KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEEN+SQDGRSTADIFG+C
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAKEIDTDTDDMVEDINKDEVWMAEDRVELIVRH  480
            LHTYLIKDAIHDGNVLGFSVDYINTIKA++IDT+TD++VE+IN DEVW++++RVELI RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  ILENHDKYTRNRQYSSILTVQSIPALIQYYQAFNKINQEYDRPLKVAGIYSFGPNEEAKE  540
            I ENHDKYTRNRQYS+I+TVQSIPAL++YY+AF+KI+++Y++PLKVAG++S+++NEE +E
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  SDNEVKTETAREHLDKMMQDYntnfdtnfntdtfQEYFNHVSKNVKKGIKDNKIDVLIVV  600
            +  EV    +R  L+ ++QDYN NF+TNF+TDTFQEYFNH+SKNVKKG+KDNKIDVLIVV
Sbjct  541  G--EVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVV  598

Query  601  NMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKKATDSAL  660
            NMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLK+ TD+AL
Sbjct  599  NMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNAL  658

Query  661  QLFSQTEDTDRVLMKSYDEYKAEFVDALAELKMIAPTPQHMDQVQDEEELKRFVEAYRLV  720
            +LFSQTEDTDRVLM+ YDEYKAEFVDALAELK +A  PQ+MDQVQDE+E K FVEA+RLV
Sbjct  659  KLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLV  718

Query  721  SKLILRMKAFDEFEFTSSSVGMEEQDFEDYKSKYFAIYDQVKPQRGDKDKVSILNDIDFE  780
            SKL+LR+KAFDEF+FT +++GM+EQ+FEDYKSKYFAIYD+VKP+RG+ +KVSILNDIDFE
Sbjct  719  SKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFE  778

Query  781  IEILRNDTINVSYIMDLVRQIDLSDKVeqqrnreqirriLDTADDPKLRLKRDLIKEFID  840
            IEILRND INVSYIMDLVRQIDL DK EQQRNR+QIRR+LD ADDP LRLKRDL++EFID
Sbjct  779  IEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFID  838

Query  841  KIIPDLSEDDDVDEVYINFENAKREEDFNAFADQKSIDEDVLKHITSEFEYSGILNNDKI  900
             +IP+LSE+D++DE YI FENAKRE +FN FA+Q+++DE+VLK+IT+E+EYSGI+N+D +
Sbjct  839  DVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHL  898

Query  901  KDLVTGMKLREKRQTKAAVASFVEEMTEKYS  931
            K+LV + KLREKRQTK AV+SFVEE++EKYS
Sbjct  899  KELVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

3) C248_0187 in NC_018608


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4602),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

4) hsdR in NC_017351


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4602),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEVYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESEVYLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

5) hsdR in NC_022222


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4601),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 698/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYIWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGYIWHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

6) ST398NM01_0213 in NC_017673


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4602),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

7) hsdR in NC_021670


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4603),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFIDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

8) M013TW_0183 in NC_016928


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4602),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEVYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESEVYLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVESLIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVE+LI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

9) SAR0196 in NC_002952


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4603),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFIDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

10) SAS0170 in NC_002953


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4602),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEVYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESEVYLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

11) hsdR in NC_003923


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4602),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEVYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESEVYLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

12) SA40_0160 in NC_022443


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4602),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEVYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESEVYLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVESLIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVE+LI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

13) SA957_0175 in NC_022442


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4602),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEVYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESEVYLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVESLIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVE+LI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

14) SAT0131_00189 in NC_017347


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4603),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFIDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

15) hsdR in NC_017342


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4603),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFIDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

16) SATW20_02050 in NC_017331


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4603),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFIDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

17) SARLGA251_01660 in NC_017349


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1213 bits (4603),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVESLIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVE+LI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEKMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

18) hsdR in NC_017340


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

19) SAAG_00677 in NC_022113


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4599),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDMEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+ +EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFIDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

20) hsdR in NC_021554


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVSIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE V+IR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDRYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+D YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLREKRKARKAIESFVAETTEKYG  928
            ++GD  LREKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

21) SAKOR_00175 in NC_022226


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4599),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

22) SACOL0180 in NC_002951


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4598),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAPLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA  L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

23) hsdR in NC_017343


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

24) SaurJH1_0185 in NC_009632


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

25) SaurJH9_0180 in NC_009487


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

26) BN843_1990 in NC_021059


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAPLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA  L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MVRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

27) hsdR in NC_009782


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

28) hsdR in NC_002758


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

29) hsdR in NC_002745


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

30) SAOUHSC_00162 in NC_007795


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4598),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAPLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA  L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

31) hsdR in NC_009641


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4598),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAPLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA  L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

32) SAI1T1_2001440 in NC_020529


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

33) SAI2T2_1001440 in NC_020564


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

34) SAI3T3_1001440 in NC_020532


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

35) SAI4T8_1001440 in NC_020533


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

36) hsdR in NC_020537


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

37) SAPIG0213 in NC_017333


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4597),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 851/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVGRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLV+RK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

38) hsdR in NC_020566


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

39) hsdR in NC_020536


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

40) hsdR in NC_020568


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4596),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 695/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

41) hsdR in NC_007793


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4598),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAPLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA  L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

42) hsdR2 in NC_010079


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1212 bits (4598),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAPLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA  L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

43) hsdR in NC_017341


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1211 bits (4594),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 697/929 (76%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFIDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDYIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

44) SAOV_0140 in NC_017337


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1211 bits (4594),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 849/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVESLIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVE+LI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLKQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKVEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + +  E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEKMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

45) SAAV_0163 in NC_013450


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1209 bits (4587),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 694/929 (75%), Positives = 849/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLD + WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL +AG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRVLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYR LK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

46) SAEMRSA15_01600 in NC_017763


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1208 bits (4582),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 696/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVEALIQQATETGNNGYIWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVEALI+QATET+NNGYIWHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKAFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+K+FGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQNSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+ SG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

47) SAB0135 in NC_007622


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1208 bits (4583),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 692/929 (75%), Positives = 850/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERITIRDNKQLLDNFRSILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE +TIR+++QLLDNFRSILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESVRILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFES RILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+NNRINTL+ F+E+F+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAVESLIQQATETGDNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK  300
            MRPYQV AVE+LI+QATET++NGY+WHTTGSGKTLTSFKASQ+LS+QDDIKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLLRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QL++QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVFGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH  480
            LHTYLI+DAIHDGNV+GFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL++RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVDKNL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+DTD +LMR Y+EYK EF+DA  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  IILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+EQE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnqeqirriLDHADDPTLRLKRDLIREFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RN++QIRR+LD+ADDPTLRLKRDL+REFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKK  899
            +P L+ +D+ID+ Y+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN +HLK 
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYG  928
            ++GD  L+EKR+++KA+ SFV E +EKY+
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

48) SAA6159_00176 in NC_017338


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1206 bits (4574),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 691/929 (75%), Positives = 847/929 (92%), Gaps = 1/929 (0%)

Query  1    MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQ  60
            M YQSE+ALE EMM+QL   GYE VTIR+++QLLDNFR+ILNERHADKL+G+PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESE+YLSFLDT+ WC+NKFQ+TNQVSV+DTYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+FIISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNKRINILQSFTETFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+N+RIN L+ FTETF+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAAEALVQQATETGNNGYIWHTTGSGKTLTSFKASQILSQQESIKKVIFLVDRK  300
            MRPYQV A EAL++QATET+NNGYIWHTTGSGKTLTSFKASQ+LS+Q+ IKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVARH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL+ARH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEKMISDYNKKFETNFSTDTHNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDRSLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVD++L YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDADTILMRSYEEYKKEFMEAYHELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAK  719
            FSQT+D+D +LMR Y+EYK EF++A  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  ILLRLTAFDEFEFTVDEIGMDAQENEDYKSKYLAVYDQVKRSTAEKNKVSILNDIDFEIE  779
            ++LRL AFDEF+FT  +IGM+ QE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnreqirriLDHADDPTLRLKRDLIKEFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RNR+QIRR+LD+ADDPTLRLKRDL++EFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDNIDEAYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHQLKQ  899
            +P L+ +DNIDEAY+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN ++LK+
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGDLPLKEKRKARKAIESFVAETTEKYD  928
            ++GD  L+EKR+++KA+ SFV E +EKY 
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

49) SAMSHR1132_01700 in NC_016941


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score = 1183 bits (4486),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 689/929 (75%), Positives = 846/929 (92%), Gaps = 1/929 (0%)

Query  1    MAHQSEYALENEMMNQLEQLGYERVTIRNNEQLLDNFRAILNERHADKLDGKPLTDKEFQ  60
            M  QSE+ALE EMM+QL   GYE VTIRN++QLLDNFR+ILNERHADKL+G PLTDKEFQ
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLLTMIDGKSIFESARILRDKLPLRRDDESEVYLSFLDTKSWCKNKFQVTNQIAVEDAYK  120
            RLLTMI+GK+IFESARILRDK+PL+RDDESEVYLSFLDT+ WC+NKFQ+TNQ++V+D+YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFVISNGVETR  180
            ARYDVTILINGLPLVQ+ELKRRGIDINEAFNQV RYRKQNYTGLFRYIQ+F+ISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNNDSELLKSHMFYWSDKQNKRINILQSFTETFMRPCQLAKMISRYMIINETDRILMA  240
            Y+SNND+E+ KSHMFYWSDK+N+RIN L+ FTETF+RPC++AKMISRYMI+NETD ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQVYAAEALVQQATETGNNGYIWHTTGSGKTLTSFKASQILSQQESIKKVIFLVDRK  300
            MRPYQV A EAL++QATET+NNGYIWHTTGSGKTLTSFKASQ+LS+Q+ IKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY  360
            DLDSQTEEEFNKF+KG+VDKT NT+QLV+QL+DKSLPLIVTTIQKM+KAIQ NA+ L+QY
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC  420
            KT+KVVFIIDECHRSQFGDMHR+V+QHF+NAQYFGFTGTPRF EN SQDGR+TADIFGRC
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVARH  480
            LHTYLI+DAIHDGNVLGFSVDYINT+K + + +E + +VE+I+T+EVWL+D+RVEL+ARH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  481  IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD  540
            I +NHDKYTRNRQYS+IFTVQSI AL+KYY++FK+++K  E+PL VAG+F++ +NE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  541  GEV-PYHSREKLEKMISDYNKKFETNFSTDTHNEYFNHISKNVKKGVKDSKIDILIVVNM  599
            GEV   HSR KLE +I DYN +F TNFSTDT +EYFNHISKNVKKGVKD+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  600  FLTGFDSKVLNTLYVDRNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRV  659
            FLTGFDSKVLNTLYVD+NL YHDLIQAYSRTNRVEKE+KPFGKIVNYRDLK++TD+AL++
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  660  FSQTNDADTILMRSYEEYKKEFMEAYHELKIIVPTPHMVDDIQDEEELKRFVEAYrllak  719
            FSQT+D+D +LMR Y+EYK EF++A  ELK +   P+ +D++QDE+E K FVEA+RL++K
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  720  illrlkaFDEFEFTVDEIGMDAQENEDYKSKYLAVYDQVKRSTAEKNKVSILNDIDFEIE  779
            ++LRLKAFDEF+FT  +IGM+ QE EDYKSKY+A+YD+VK   +E +KVSILNDIDFEIE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  780  MMRNDTINVNYIMNILRQIDLEDKAeqrrnreqirriLDHADDPTLRLKRDLIKEFIDNV  839
            ++RND INV+YIM+++RQIDL DKAEQ+RNR+QIRR+LD+ADDPTLRLKRDL++EFID+V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  840  VPSLNKDDNIDEAYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHQLKQ  899
            +P L+ +DNIDEAY+ FE+ K+E+EF+ FA ++++DEQ LK I+ +Y+YSG+VN ++LK+
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  900  MIGELPLKEKRKARKAIESFVAETTEKYD  928
            ++G+  L+EKR+++KA+ SFV E +EKY 
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

50) hsdR in NC_002976


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  957 bits (3627),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 543/931 (59%), Positives = 764/931 (83%), Gaps = 6/931 (0%)

Query  1    MVYQSEYAlenevlqqlenlGYERVNIHNVEQLHDNFRTIINERHKEKLNGKPLTDREFE  60
            MVYQSE+ALE E+++QL + GYE V I+N +QL DNFR+I+NERH +KLNG PLTD+EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLMTGINGKSVFDSAMQLRDSYVLKRDDDTDLYLNFMNLKQWCQNKFQVTNQISVKDKYK  120
            RL+T INGK++F+SA  LRD   LKRDD++++YL+F++ ++WCQNKFQ+TNQ+SV D YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  SRYDVTILINGLPLVQIELKRSGVAITEAFNQIERYRRQNYTGLFRYIQLFVVSNKMETR  180
            +RYDVTILINGLPLVQIELKR G+ I EAFNQ+ RYR+QNYTGLFRYIQLF++SN ++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YYANSDREIFKGQMFYWSNEQNERINYLKDFIEDFLESCHISKMISRYMVVNETDKFLMA  240
            Y +N+D EI+K++MFYWS+ +N+RIN L++F E FL +CHI+KMISRYM++NETD++LMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  LRPYQVYAVEAILNRALETNNNGYIWHTTGSGKTLTSFKASQLLSQEENIKKVIFLVDRK  300
            +RPYQV AVEA++++A ET+NNGYIWHTTGSGKTLTSFKASQ+LS++++IKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDNQTLAEFNKFQEDSVDFTDNTRKLLKQLADPTLPLIVTTIQKMANAVKSNHSVMESY  360
            DLD+QT  EFNKF  +SVD T+NT +L+KQL D +LPLIVTTIQKM++A+++N   ++ Y
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  KQDKVIFIIDECHRTQFGDMHRLIKQHFENAQYFGFTGTPRFEENKSQDGRATADIFDKC  420
            K DKV+FIIDECHR+QFGDMHR+++QHF+NAQYFGFTGTPRFEEN+SQDGR+TADIF++C
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHHYLIKDAIRDHNVLGFSVEYNQTFNSH--EDLDEEYISKINTSEIWMADERIEAVCRH  478
            LH YLIKDAI+D NVLGFSV+Y +T++++  +   +E +  INT E+W++D+R+E + RH
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  479  LISNYHKKTDNGNYTSMFAVQSIPMAIKYYDTFQRLKNEGVHDLNVATIFTYQANEDAQE  538
            +  N +K T N +Y+++F+VQSIP  +KYYD+F+++ ++  H L+VA +F+Y ANE+ +E
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  539  DE-NHVHSREVLDRIMNDYNQTFKTNYNTDNFEGYFSDVSKRMKEVVRDDKIDILIVVNM  597
            +E ++ HSR  L+ +++DYN  F TN++TD F+ YF+++SK +K  V+D+KID+LIVVNM
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  598  FLTGFDSKKLNTLYVDKNLKHHDLIQAYSRTNRVEKERKPYGNIVCYRDLKKQTDEAIEI  657
            FLTGFDSK LNTLYVDKNLK HDLIQAYSRTNRVEKE KP+G+IV YRDLK++TD+A+ +
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  658  FSQTDNTDTVLSLSYEEYLDNFKDILQDVFQLAPTPLDVDKLEAEDLKKEFVISFRDLSN  717
            FSQT++TD VL   Y+EY  +F D L ++  +A  P D+D+++ E+ KK FV +FR +S+
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  718  TLIKLKTFDEFQFTEDELGIAEQTYEDYKGKYLNIYEEVMRGKKVDGEEGVSVLDDIDFQ  777
             +++LK+FDEF+FT  ++G+ EQ +EDYK+KY+ IY+EV + K+ + E  VS+L+DIDF+
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEV-KPKRGEVEK-VSILNDIDFE  778

Query  778  VELMRNDLINVKYIMDLIGQINLSDAKARDEKRHQIHKLLDKADDQQLRLKADLIRSFLD  837
            +E++RND INV YIMDL+ QI+L D   ++ +R+QI+++LD+ADD  LRLK DL+R F+D
Sbjct  779  IEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFID  838

Query  838  KVVPSLKEDSDINEAYYEFEDKEKTKEIDAFAEQKAFSAMLLNEAVNEYEYSGNIDRKSI  897
             V+P L E+ +I+EAY  FE+  +  E++ FA+Q+A    +L++   EYEYSG +++  +
Sbjct  839  DVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHL  898

Query  898  GQNISEPFMKRKRKTDQ-IIQFIEDTVEKYG  927
             + +++  ++ KR+T + +  F+E+  EKY+
Sbjct  899  KELVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

51) SLGD_00655 in NC_013893


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  943 bits (3571),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 549/930 (60%), Positives = 755/930 (82%), Gaps = 4/930 (0%)

Query  1    MSYQGELALENDVIKQLESQGYERIILRNHEQLVENFRQILNERNKENLKNRPLSDTEFA  60
            M YQ+E+ALE +++ QL S+GYE + +RN++QL++NFR ILNER+ ++L+  PL+D EF 
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLMTDISDKSVFDSAMQLRDSYTLERDDESKVYLYFLDTEHWCQNKFQVTNQVTVDDKYK  120
            RL+T I++K++F+SA  LRD   L RDDES VYL FLDT HWCQNKFQ+TNQV+VDD YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTLLINGLPLVQIELKRSGIAISQAFNQIERYRKHNYRGLFRFIQLFVVSNKKETR  180
            ARYDVT+LINGLPLVQIELKR GI I++AFNQ+ RYRK+NY GLFR+IQLF++SN  +TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YYANSDKEIFKSLMFYWSDKDNRRINNLKEFIQEFLDRCRIAKMISRYMITNETDKLLMA  240
            Y +N+D EI+KS MFYWSDK+N RIN L+EF + FL  C+IAKMISRYMI NETD++LMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  LRPYQVYAVESLLNRATETNNNGYIWHTTGSGKTLTSFKTSQILSKDPSIKKVIFLVDRK  300
            +RPYQV AVE+L+++ATET+NNGYIWHTTGSGKTLTSFK+SQ+LS +  IKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTLAEFNKFQMDSVDLTDNTHKLLKQLDDPFQKLIVTTIQKMANAVKSGANIMDKY  360
            DLDSQT  EFNKF  +SVD T+NT +L+KQL D    LIVTTIQKM++A+++ A+ +D+Y
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  QQDKVIFIIDECHRTQFGEMHRLIRQHFKQAQYFGFTGTPRFEENASLDGRATADIFEKC  420
            + DKV+FIIDECHR+QFG+MHR++RQHF++AQYFGFTGTPRFEEN S DGR+TADIF +C
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIKDAIRDGNVLGFSVEYISTF-ANAIHDMDESYVSSIDENELWMADDRLNMIAKH  479
            LHTYLIKDAI+DGNVLGFSV+YI+T+ A+ I+   +  V +I+ +E+W++D+R+++IA+H
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  480  LVANHHKKTRNQMYTSILTVQSIPMAIKYYKIFKQLKDAGQHHLNVSTIFTYAANED-TQ  538
            +  NH+K TRN+ Y++I+TVQSIP  +KYY  FK++    +H L+V+ +F+YAANE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  539  EQIDKVHTKEELEQVMCDYNQMFDKNFSLDTFDGFFNDISKRVKQGNPAERLDILIVVDM  598
             ++D  H++  LE+V+ DYN  F+ NFS DTF+ +FN+ISK VK+G   +++D+LIVV+M
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  599  FLTGFDSKKLNTLYVDRNLKYHGLIQAYSRTNRVEKETKPYGNIVCYRNLKDNTDKAIEL  658
            FLTGFDSK LNTLYVD+NLKYH+LIQAYSRTNRVEKETKP+G+IV YR+LK+NTD+A+ L
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  659  FSQTNDTDTVLSPSFDVLLSDFKHVLTQLLNVVPTPDDVDNLEREDDQLDFVLAYRAVAS  718
            FSQT+DTD VL   +D   ++F + L++L  V   P+D+D+++ E+++  FV A+R V+ 
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  719  LLQRLKTFDEFEFTSDLLGISQQTFEDYQGKYYAIYDKVKGQR-QSEKTSVLDDIDFKIE  777
            L+ RLK+FDEF+FT   +G+++Q FEDY++KY+AIYD VK +R + EK S+L+DIDF IE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  778  ILRNDMINVQYildllnnidlTDKAQTERVRKQIKQLLSKADDDKLRLKAELIREFLDKV  837
            ILRND INV YI+DL+ +IDL DKA+ +R R QI+++L +ADD  LRLK +L+REF+D V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  838  IPHLDKDAVIEDAYFNFeeevkeqeiqeFANDKAYPIDLLKEVINEYEFSGQLDNNFVEQ  897
            IP+L  +  I++AY+ FE+  +E E+++FA+++A   ++LK++  EYE+SG ++++ + +
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  898  GITGGLL-VRTQKIENVKSFVQETAEKYGA  926
             + +  L  + Q    V SFV+E +EKY++
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYSS  930

52) SLUG_06530 in NC_017353


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  943 bits (3571),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 549/930 (60%), Positives = 755/930 (82%), Gaps = 4/930 (0%)

Query  1    MSYQGELALENDVIKQLESQGYERIILRNHEQLVENFRQILNERNKENLKNRPLSDTEFA  60
            M YQ+E+ALE +++ QL S+GYE + +RN++QL++NFR ILNER+ ++L+  PL+D EF 
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RLMTDISDKSVFDSAMQLRDSYTLERDDESKVYLYFLDTEHWCQNKFQVTNQVTVDDKYK  120
            RL+T I++K++F+SA  LRD   L RDDES VYL FLDT HWCQNKFQ+TNQV+VDD YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  ARYDVTLLINGLPLVQIELKRSGIAISQAFNQIERYRKHNYRGLFRFIQLFVVSNKKETR  180
            ARYDVT+LINGLPLVQIELKR GI I++AFNQ+ RYRK+NY GLFR+IQLF++SN  +TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YYANSDKEIFKSLMFYWSDKDNRRINNLKEFIQEFLDRCRIAKMISRYMITNETDKLLMA  240
            Y +N+D EI+KS MFYWSDK+N RIN L+EF + FL  C+IAKMISRYMI NETD++LMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  LRPYQVYAVESLLNRATETNNNGYIWHTTGSGKTLTSFKTSQILSKDPSIKKVIFLVDRK  300
            +RPYQV AVE+L+++ATET+NNGYIWHTTGSGKTLTSFK+SQ+LS +  IKKVIFLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTLAEFNKFQMDSVDLTDNTHKLLKQLDDPFQKLIVTTIQKMANAVKSGANIMDKY  360
            DLDSQT  EFNKF  +SVD T+NT +L+KQL D    LIVTTIQKM++A+++ A+ +D+Y
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALDQY  360

Query  361  QQDKVIFIIDECHRTQFGEMHRLIRQHFKQAQYFGFTGTPRFEENASLDGRATADIFEKC  420
            + DKV+FIIDECHR+QFG+MHR++RQHF++AQYFGFTGTPRFEEN S DGR+TADIF +C
Sbjct  361  KTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRC  420

Query  421  LHTYLIKDAIRDGNVLGFSVEYISTF-ANAIHDMDESYVSSIDENELWMADDRLNMIAKH  479
            LHTYLIKDAI+DGNVLGFSV+YI+T+ A+ I+   +  V +I+ +E+W++D+R+++IA+H
Sbjct  421  LHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARH  480

Query  480  LVANHHKKTRNQMYTSILTVQSIPMAIKYYKIFKQLKDAGQHHLNVSTIFTYAANED-TQ  538
            +  NH+K TRN+ Y++I+TVQSIP  +KYY  FK++    +H L+V+ +F+YAANE+  +
Sbjct  481  ITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNE  540

Query  539  EQIDKVHTKEELEQVMCDYNQMFDKNFSLDTFDGFFNDISKRVKQGNPAERLDILIVVDM  598
             ++D  H++  LE+V+ DYN  F+ NFS DTF+ +FN+ISK VK+G   +++D+LIVV+M
Sbjct  541  GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNM  600

Query  599  FLTGFDSKKLNTLYVDRNLKYHGLIQAYSRTNRVEKETKPYGNIVCYRNLKDNTDKAIEL  658
            FLTGFDSK LNTLYVD+NLKYH+LIQAYSRTNRVEKETKP+G+IV YR+LK+NTD+A+ L
Sbjct  601  FLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKL  660

Query  659  FSQTNDTDTVLSPSFDVLLSDFKHVLTQLLNVVPTPDDVDNLEREDDQLDFVLAYRAVAS  718
            FSQT+DTD VL   +D   ++F + L++L  V   P+D+D+++ E+++  FV A+R V+ 
Sbjct  661  FSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSK  720

Query  719  LLQRLKTFDEFEFTSDLLGISQQTFEDYQGKYYAIYDKVKGQR-QSEKTSVLDDIDFKIE  777
            L+ RLK+FDEF+FT   +G+++Q FEDY++KY+AIYD VK +R + EK S+L+DIDF IE
Sbjct  721  LVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIE  780

Query  778  ILRNDMINVQYildllnnidlTDKAQTERVRKQIKQLLSKADDDKLRLKAELIREFLDKV  837
            ILRND INV YI+DL+ +IDL DKA+ +R R QI+++L +ADD  LRLK +L+REF+D V
Sbjct  781  ILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDV  840

Query  838  IPHLDKDAVIEDAYFNFeeevkeqeiqeFANDKAYPIDLLKEVINEYEFSGQLDNNFVEQ  897
            IP+L  +  I++AY+ FE+  +E E+++FA+++A   ++LK++  EYE+SG ++++ + +
Sbjct  841  IPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

Query  898  GITGGLL-VRTQKIENVKSFVQETAEKYGA  926
             + +  L  + Q    V SFV+E +EKY++
Sbjct  901  LVGDKKLREKRQTKKAVTSFVEEVSEKYSS  930

53) CLK_1539 in NC_010520


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  887 bits (3358),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 514/931 (56%), Positives = 735/931 (79%), Gaps = 17/931 (1%)

Query  1    MAYQSEAELEKQLIKQLESKGYNKVKISTEEELIKNFRVQLNKYNEEKLAGTPLTDKEFE  60
            M YQSE  LE +++ QL S+GY+ V I  E++L+ NFR  LN  + +KL G PLTDKEF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  61   RVMRKVEGKSIFEGAKILRDKWPLKRDDGLEVYIEFFNSKSLCKNIFQVTTQTTVVGKYT  120
            R++  ++GK+IFE+A+ILRDK PLKRDD  EVY+ F++++  C+N FQ+T Q +V + Y 
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  121  NRYDVTLLVNGLPLVQIELKRRGVDFKEAFNQIQRYRKHSYQGLYRYIQIFIVSNGMDTK  180
             RYDVT+L+NGLPLVQIELKRRG+D++EAFNQ+ RYRK++Y GL+RYIQ+FI+SNG+DT+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  181  YFSNSDRDILYTHTFFWTDEKNQRISKLNDFTDTFLERSFISKIIARYMIINYTEKILMV  240
            Y+SN+D +I  +H F+W+D  N+RI+ LN+FT+TFL    I+K+I+RYMI+N T++ILM 
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  241  MRPYQIYAVEALINRALETNGNGYIWHTTGSGKTLTSFKASQILSKEPKIKKVFFLVDRK  300
            MRPYQ+ AVEALI++A ET+ NGYIWHTTGSGKTLTSFKASQ+LS +  IKKV+FLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  301  DLDSQTINEFNKFEPKSVDVTDKTSTLIKQIKDVNKPLIVTTIQKMANAIKSPRYTKIME  360
            DLDSQT +EFNKF   SVD T++T+ L+KQ+KD + PLIVTTIQKM++AI++   +  ++
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNN--AEALD  358

Query  361  QYKDEKVAFIIDECHRSQFGSMHIAIEKHFKKAQYFGFTGTPILKENKSQDGRTTADLFD  420
            QYK +KV FIIDECHRSQFG MH  + +HF++AQYFGFTGTP + EN+SQDGR+TAD+F+
Sbjct  359  QYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFG  418

Query  421  EMLHSYLIKDAIKDNNVLGFSVEYISTFKGQ-FDENDDTKVKAIDKKEAFMDDERISQIA  479
              LH+YLIKDAI D NVLGFSV+YI+T+K+Q +D + D  V +I+  E  + D+R+  IA
Sbjct  419  RCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIA  478

Query  480  QDIIKNHNKKTKDRQYTAIFAVESIEMLVKYYDKFKKL----DHNLKITGIFSYGVNE--  533
            ++I  NH+K T++RQY+AIF+V+SI  LVKYYD FKK+    +H LK++G+FSY+ NE  
Sbjct  479  RHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEER  538

Query  534  -DAEGKDEHSRDSLEEIIKDYNEMFDTKYSTDTFQGYFANVSKKVKSG----QIDILIVV  588
             ++E  + HSR+ LEE+I+DYN  F+T++STDTFQ YF ++SK+VK G    +ID+LIVV
Sbjct  539  NEGEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVV  598

Query  589  NMFLTGFDSKTLNTLYIDKNLAYHSLIQAYSRTNRVYKSTKPYGNIVCYRNLKKKTDEAI  648
            NMFLTGFDSK LNTLY+DKNL YH LIQAYSRTNRV K TKP+G+IV YR+LK++TD+A+
Sbjct  599  NMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNAL  658

Query  649  KLFSLTDNANEVLMKSYNHYLEAFKESVLNLYKIVPRPEDVDFIEGekekkeFIVAFREL  708
            KLFS T++++ VLM+ Y++Y   F +++ +L  +  +P+D+D +++E+EKK F+ AFR +
Sbjct  659  KLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLV  718

Query  709  SKILIKLQTFVEFEFDEDKLLISEQTYQDFKSKYLAIYDSFKN--DEEGKASILDDIDFG  766
            SK++++L++F EF+F   ++ ++EQ ++D+KSKY+AIYD  K   +E  K SIL+DIDF 
Sbjct  719  SKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFE  778

Query  767  IELMHTDKINVDYIMNLIRNIDFSDKENKEKDIKHIIKELDRADSEHLRLKVDLLKSFLQ  826
            IE+++ D+INV YIM+L+R+ID+ DK +++++  +I + LD AD   LRLK DLL+ F++
Sbjct  779  IEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFID  838

Query  827  EVVPNLTEEDSIDDAYSRFEQVQRTEEIKAFSEQAAVKEGKLKDYISEYEYSGMLDRKDM  886
            +V+P+L+EED+ID+AY  FE+ +R  E++ F++Q AV E  LKD  +EYEYSG++++ ++
Sbjct  839  DVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHL  898

Query  887  GDTIEGSFLKRKKVVNK-ITTFIKNHVEKFS  916
             + + +  L+ K+  +K +T+F+ +  EK+S
Sbjct  899  KELVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

54) Mvol_0317 in NC_014222


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  783 bits (2962),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 456/934 (49%), Positives = 703/934 (76%), Gaps = 22/934 (2%)

Query  4    ESESQLENKFIKQLVNQGYSRIKIEDEKDLENNFREQLYLHNKEKLDNIPFSDYEFNKIM  63
            +SE  LE   + QL ++GY  + I +E++L +NFR  L  ++ +KL+  P++D EF++++
Sbjct  4    QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  64   TQLSGKSIFESAKILRDKCILERDEGNTPKKVYLEFIDSNNLNNNIFQVTNQITMKGKYE  123
            T ++GK+IFESA+ILRDK  L RD+ +    VYL F+D+ +  +N FQ+TNQ+++ + Y 
Sbjct  64   TMINGKGIFESARILRDKMPLKRDDESE---VYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  124  NRYDVTLLINGLPLIQVELKKAGVDIKEAFNQVMRYRKHSYKGLFRYIQIFVIGSNKNVK  183
             RYDVT+LINGLPL+Q+ELK+ G+DI+EAFNQVMRYRK++Y GLFRYIQ+F+I++  + +
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  184  YFANRDGEILFNSAFFWANVDNKRITNLDEFADNFLEKNRIAKIISEYMIINESDKNLMV  243
            Y++N DGEI  +  F+W++ +N+RI  L+EF++ FL   +IAK+IS YMI+NE+D+ LM 
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  244  MRPYQIYAVESILDRAINTNSNGYVWHTTGSGKTLTSFKASQLLANNPKIDRVFFLVDRK  303
            MRPYQ+ AVE+++++A +T++NGY+WHTTGSGKTLTSFKASQ+L+++  I +V+FLVDRK
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  304  DLDAQTIKEFNKFEKDSVDDTDNTKNLVKQIQEIDRKLIVTTIQKMSIAIKSEKYAEIMD  363
            DLD+QT  EFNKF K+SVD T+NT +LVKQ+++    LIVTTIQKMS AI+++  AE +D
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNN--AEALD  358

Query  364  KYKDDKVIFIIDECHRSQFGEMHRVIKKHFVNAQYFGFTGTPIFKENKGAKDMVTADLFK  423
            +YK DKV+FIIDECHRSQFG+MHR++++HF NAQYFGFTGTP F EN++  +  TAD+F 
Sbjct  359  QYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFG  418

Query  424  KCLHTYLIKDAIRDGNVLGFLIQYFKTFEG-NYDKNDDTKIYKINKKELWSTDERISLIC  482
            +CLHTYLIKDAI+DGNVLGF ++Y++T+ + N D + D  +  IN  E+W +D+R+ LI 
Sbjct  419  RCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIA  478

Query  483  NDIVKNHNLKTRDKEYCSIFAVDSIPSLIKYYNKF----KEFDHDLKIAGIYTYEANE--  536
             +I  NH+  TR+++Y +IF+V+SIP+L+KYY+ F    K+++H LK+AG+++Y ANE  
Sbjct  479  RHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEER  538

Query  537  ASAGINAEHSRDILERIISDYNKIYNTNYSTDTFSNYFIDISKRLKNG----QIDILLVV  592
              + ++  HSR+ LE +I DYN  + TN+STDTF +YF +ISK +K+G    +ID+L+VV
Sbjct  539  NEGEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVV  598

Query  593  NMFLTGFDSKLLNTIYIDKDMKYHNLIQAFSRTNRVYSANKPHGNVVCYRNLREKTENAI  652
            NMFLTGFDSK+LNT+Y+DK++KYH+LIQA+SRTNRV    KP G++V YR+L+++T+NA+
Sbjct  599  NMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNAL  658

Query  653  RLFSQTDDVDTVLMESYEFYLDKFKERLEKLHNIANTPDDVDLIEGESKTSEFVMAFKNL  712
            +LFSQT+D D VLM  Y+ Y   F + L  L  +A  P+D+D +++E+    FV AF+ +
Sbjct  659  KLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLV  718

Query  713  TKVLVTMKNFVEFEFEEDKLGIDEQTYQEYKTKYLMVYDDV--TRGEYEGTSVLKDIDFS  770
            +K+++ +K F EF+F   ++G++EQ +++YK+KY+ +YD+V   RGE E  S+L+DIDF 
Sbjct  719  SKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFE  778

Query  771  IELMYTDKINVDYilnllknldidntknRDKEIKDIVDKLKKADNEELRLKVELIQEFLE  830
            IE++  D+INV YI++L++++D+ +  +++++  +I   L +AD+  LRLK +L++EF++
Sbjct  779  IEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFID  838

Query  831  KEVPKIIELNNQDDIESLYYEFEDKKRTEEVEEFAKENNIDTTKLWSYVEEYDYSKTLDK  890
              +P   EL+++D+I+  Y  FE+ KR  E ++FA+++ +D   L     EY+YS  +++
Sbjct  839  DVIP---ELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQ  895

Query  891  KAVGDSISAPFLKKKRIINK-VSEFIQYQAKKYA  923
              + + ++   L+ KR  +K V+ F++  + KY+
Sbjct  896  DHLKELVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

55) hsdR in NC_004567


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  701 bits (2653),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/954 (44%), Positives = 682/954 (72%), Gaps = 33/954 (3%)

Query  7    QSEAELENHLIRKLQSIGYHYVEIPDVETLNTHFRAVLSERNQERLKGTPLSDREFQAVL  66
            QSE  LE +++ +L+S GY+ V I + + L  +FR++L+ER+ ++L+G PL+D+EFQ +L
Sbjct  4    QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  67   NDLIGAKTHYQVAQILRGSVVQPTGKINIKRDDDSSLYLEIFNGKQFDQNIFEVSHQMTV  126
              +I +K  ++ A+ILR+       K+ +KRDD+S +YL +++ ++  QN F++++Q++V
Sbjct  64   T-MINGKGIFESARILRD-------KMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSV  115

Query  127  EGRHENRYDVLILINGMPIAQIELKRQGVEFTQAFNQIIRYRTESYAQAKLMRLVQVFVI  186
            ++    RYDV ILING+P+ QIELKR+G+++ +AFNQ++RYR ++Y+   L R +Q+F+I
Sbjct  116  DDTYKARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTG--LFRYIQLFII  173

Query  187  SNGNETRYFANGDGELNSNFMFYWTDEHNNWLNDLDAFTTTFLSKPRLHSLIAKYTVFDS  246
            SNG +TRY++N DGE+  + MFYW+D +NN++N L+ FT TFL   ++  +I++Y +++ 
Sbjct  174  SNGIDTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNE  233

Query  247  SDHKMLLMRPYQIYATEAIIKQAIDHPHENGYVWHTTGSGKTITSFKASQLLLQETDAEK  306
            +D+ ++ MRPYQ+ A EA+I QA + ++ NGY+WHTTGSGKT+TSFKASQ+L ++ D  K
Sbjct  234  TDNILMAMRPYQVHAVEALIHQATETSN-NGYIWHTTGSGKTLTSFKASQVLSEQDDIKK  292

Query  307  VIFMIDRADLDIQTVKNFSAYLPETTGGQSPLDRTDNTAALVKQLSSNDNGLIVTTIQKM  366
            VIF++DR DLD QT  +F+ +      +++++D+T+NTA LVKQL  +   LIVTTIQKM
Sbjct  293  VIFLVDRKDLDSQTEEEFNKF------SKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKM  346

Query  367  NNAVSNDRYKDILTPYHDRKVIFIEDESHRSQMGEMRKNVNHWFKNAQHFGFTGTPIFQQ  426
            ++A+ N+   + L  Y   KV+FI DE HRSQ G+M++ V + F+NAQ FGFTGTP F++
Sbjct  347  SKAIQNN--AEALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEE  404

Query  427  NMGPDGRTTKDLYGNQLHQYLIRDAVRDGNVLGFSIQYLSTFEETDHDI-TDEQVPGIDT  485
            N + DGR+T D++G  LH YLI+DA++DGNVLGFS++Y++T+   + D  TDE V GI+T
Sbjct  405  NQSQDGRSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINT  464

Query  486  QEVYESEERLTKIVEHILLNHSHITKNKHYNAIFTVANTRMALKYYQLFRKLDPD--HNL  543
            +EV  S++R+  I  HI  NH   T+N++Y+AIFTV +    +KYY+ F+K+  D  H L
Sbjct  465  DEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPL  524

Query  544  KVTTIFTWAANEDDNEEHQKQDDVTSRMGLDQVVKDYNQMYGTDFSTDKFKDYFADVSKR  603
            KV+ +F+ AANE+ NE +   D+  SR  L++V++DYN  +GT+FSTD F++YF ++SK 
Sbjct  525  KVAGVFSYAANEERNEGE--VDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKN  582

Query  604  MRDHNDQTPTDNIDILIVVNMFLTGFDSKRLSTLYVDKNLQWHGLIQAFSRTNRVEGKQK  663
            ++        ++ID+LIVVNMFLTGFDSK L+TLYVDKNL+ H+LIQA+SRTNRVE   K
Sbjct  583  VK---KGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETK  639

Query  664  PFGNIIAYRNIKNKTDEAVALFSDGDSSG-FLAPDYDELKAEFTDKIGQLLTVTPDVQSV  722
            PFG+I+ YR++K++TD+A+ LFS+ + ++  L  DYDE KAEF D +++L +V+   Q +
Sbjct  640  PFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDM  699

Query  723  DDLYNRGDDALYEFVMAFRAVLRVYNRIRVYDDFEWAQYEPEFSDQLMEAFRGKYFTAYQ  782
            D++  ++++    FV AFR V ++  R++ +D+F+ ++ +   ++Q  E +++KYF+ Y+
Sbjct  700  DQV--QDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYD  757

Query  783  TIYQRKTQ-ERVSILDDVDFDISLLETDTINVDYIVNLISGIDLMSSTERKQDIQKIEHL  841
             +  ++ + E+VSIL+D+DF+I +L  D INV YI++L+  IDL   +E++++ ++I ++
Sbjct  758  EVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRM  817

Query  842  LDNATNDQLKSKVELLEQFLNEVLPTLDTDDDIGMSLSNFMAESQRAAIKGFSQEHHLSE  901
            LDNA +  L+ K +LL +F+++V+P L  +D+I+ +   F    + + ++ F+Q++ + E
Sbjct  818  LDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDE  877

Query  902  DFVNEQISDYNFYGKTKDKEIIDKLSANGLGFREKRQAKREIKDFVSTIDRKYS  955
            + +++  ++Y++ G  ++ ++ + ++ + L  REKRQ+K+ +  FV  +  KYS
Sbjct  878  QVLKDITGEYEYSGIVNQDHLKELVGDKKL--REKRQTKKAVTSFVEEVSEKYS  929

56) Lp16_0758 in NC_021514


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  699 bits (2645),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/954 (44%), Positives = 681/954 (72%), Gaps = 33/954 (3%)

Query  7    QSEAELENHLIRKLQSIGYHYVEIPDVETLNTHFRAVLSERNQERLKGTPLSDREFQAVL  66
            QSE  LE +++ +L+S GY+ V I + + L  +FR++L+ER+ ++L+G PL+D+EFQ +L
Sbjct  4    QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  67   NDLIGAKTHYQVAQILRGSVVQPTGKINIKRDDDSSLYLEIFNGKQFDQNIFEVSHQMTV  126
              +I +K  ++ A+ILR+       K+ +KRDD+S +YL +++ ++  QN F++++Q++V
Sbjct  64   T-MINGKGIFESARILRD-------KMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSV  115

Query  127  EGRHENRYDVLILINGMPIAQIELKRQGVEFTQAFNQIIRYRTESYAQAKLMRLVQVFVI  186
            ++    RYDV ILING+P+ QIELKR+G+++ +AFNQ++RYR ++Y+   L R +Q+F+I
Sbjct  116  DDTYKARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTG--LFRYIQLFII  173

Query  187  SNGNETRYFANGDGELNSNFMFYWTDEHNNWLNDLDAFTTTFLSKPRLHSLIAKYTVFDS  246
            SNG +TRY++N DGE+  + MFYW+D +NN++N L+ FT TFL   ++  +I++Y +++ 
Sbjct  174  SNGIDTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNE  233

Query  247  SDHKMLLMRPYQIYATEAIIKQAIDHPHENGYVWHTTGSGKTITSFKASQLLLQETDAEK  306
            +D+ ++ MRPYQ+ A EA+I QA + ++ NGY+WHTTGSGKT+TSFKASQ+L ++ D  K
Sbjct  234  TDNILMAMRPYQVHAVEALIHQATETSN-NGYIWHTTGSGKTLTSFKASQVLSEQDDIKK  292

Query  307  VIFMIDRADLDIQTVKNFSAYLPETTGGQSPLDRTDNTAALVKQLSSNDNGLIVTTIQKM  366
            VIF++DR DLD QT  +F+ +      +++++D+T+NTA LVKQL  +   LIVTTIQKM
Sbjct  293  VIFLVDRKDLDSQTEEEFNKF------SKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKM  346

Query  367  NNAVSNDRYKDILTPYHDRKVIFIEDESHRSQMGEMRKNVNHWFKNAQHFGFTGTPIFQQ  426
            ++A+ N+   + L  Y   KV+FI DE HRSQ G+M++ V + F+NAQ FGFTGTP F++
Sbjct  347  SKAIQNN--AEALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEE  404

Query  427  NMGPDGRTTKDLYENQLHQYLIRDAVRDGNVLGFSIQYLSTFEETDHDI-TDEQVPGIDT  485
            N + DGR+T D++   LH YLI+DA++DGNVLGFS++Y++T+   + D  TDE V GI+T
Sbjct  405  NQSQDGRSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINT  464

Query  486  QEVYESEERLTKIVEHILLNHSHITKNKHYNAIFTVANTRMALKYYQLFRKLDPD--HNL  543
            +EV  S++R+  I  HI  NH   T+N++Y+AIFTV +    +KYY+ F+K+  D  H L
Sbjct  465  DEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPL  524

Query  544  KVTTIFTWAANEDDNEEHQKQDDVTSRMGLDQVVKDYNQMYGTDFSTDKFKDYFADVSKR  603
            KV+ +F+ AANE+ NE +   D+  SR  L++V++DYN  +GT+FSTD F++YF ++SK 
Sbjct  525  KVAGVFSYAANEERNEGE--VDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKN  582

Query  604  MRDHNDQTPTDNIDILIVVNMFLTGFDSKRLSTLYVDKNLQWHGLIQAFSRTNRVEGKQK  663
            ++        ++ID+LIVVNMFLTGFDSK L+TLYVDKNL+ H+LIQA+SRTNRVE   K
Sbjct  583  VK---KGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETK  639

Query  664  PFGNIIAYRNIKNKTDEAVALFSDGDSSG-FLAPDYDELKAEFTDKIGQLLTVTPDVQSV  722
            PFG+I+ YR++K++TD+A+ LFS+ + ++  L  DYDE KAEF D +++L +V+   Q +
Sbjct  640  PFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDM  699

Query  723  DDLYNRGDDALYEFVMAFRAVLRVYNRIRVYDDFEWAQYEPEFSDQLMEAFRGKYFTAYQ  782
            D++  ++++    FV AFR V ++  R++ +D+F+ ++ +   ++Q  E +++KYF+ Y+
Sbjct  700  DQV--QDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYD  757

Query  783  TIYQRKTQ-ERVSILDDVDFDISLLETDTINVDYIVNLISGIDLMSSTERKQDIQKIEHL  841
             +  ++ + E+VSIL+D+DF+I +L  D INV YI++L+  IDL   +E++++ ++I ++
Sbjct  758  EVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRM  817

Query  842  LDNATNDQLKSKVELLEQFLNEVLPTLDTDDDIGMSLSNFMAESQRAAIKGFSQEHHLSE  901
            LDNA +  L+ K +LL +F+++V+P L  +D+I+ +   F    + + ++ F+Q++ + E
Sbjct  818  LDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDE  877

Query  902  DFVNEQISDYNFYGKTKDKEIIDKLSANGLGFREKRQAKREIKDFVSTIDRKYS  955
            + +++  ++Y++ G  ++ ++ + ++ + L  REKRQ+K+ +  FV  +  KYS
Sbjct  878  QVLKDITGEYEYSGIVNQDHLKELVGDKKL--REKRQTKKAVTSFVEEVSEKYS  929

57) hsdR in NC_014554


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  699 bits (2643),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/954 (44%), Positives = 681/954 (72%), Gaps = 33/954 (3%)

Query  7    QSEAELENHLIRKLQSIGYHYVEIPDVETLNAHFRAVLSERNQERLKGTPLSDREFQAVL  66
            QSE  LE +++ +L+S GY+ V I + + L  +FR++L+ER+ ++L+G PL+D+EFQ +L
Sbjct  4    QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  67   NDLIGAKTHYQVAQILRGSVVQPTGKINIKRDDDSSLYLEIFNGKQFDQNIFEVSHQMTV  126
              +I +K  ++ A+ILR+       K+ +KRDD+S +YL +++ ++  QN F++++Q++V
Sbjct  64   T-MINGKGIFESARILRD-------KMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSV  115

Query  127  EGRHENRYDVLILINGMPIAQIELKRQGVEFTQAFNQIIRYRTESYAQAKLMRLVQVFVI  186
            ++    RYDV ILING+P+ QIELKR+G+++ +AFNQ++RYR ++Y+   L R +Q+F+I
Sbjct  116  DDTYKARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTG--LFRYIQLFII  173

Query  187  SNGNETRYFANGDGELNSNFMFYWTDEHNNWLNDLDAFTTTFLSKPRLHSLIAKYTVFDS  246
            SNG +TRY++N DGE+  + MFYW+D +NN++N L+ FT TFL   ++  +I++Y +++ 
Sbjct  174  SNGIDTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNE  233

Query  247  SDHKMLLMRPYQIYATEAIIKQAIDHPHENGYVWHTTGSGKTITSFKASQLLLQETDAEK  306
            +D+ ++ MRPYQ+ A EA+I QA + ++ NGY+WHTTGSGKT+TSFKASQ+L ++ D  K
Sbjct  234  TDNILMAMRPYQVHAVEALIHQATETSN-NGYIWHTTGSGKTLTSFKASQVLSEQDDIKK  292

Query  307  VIFMIDRADLDIQTVKNFSAYLPETTGGQSPLDRTDNTAALVKQLSSNDNGLIVTTIQKM  366
            VIF++DR DLD QT  +F+ +      +++++D+T+NTA LVKQL  +   LIVTTIQKM
Sbjct  293  VIFLVDRKDLDSQTEEEFNKF------SKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKM  346

Query  367  NNAVSNDRYKDILTPYHDRKVIFIEDESHRSQMGEMRKNVNHWFKNAQHFGFTGTPIFQQ  426
            ++A+ N+   + L  Y   KV+FI DE HRSQ G+M++ V + F+NAQ FGFTGTP F++
Sbjct  347  SKAIQNN--AEALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEE  404

Query  427  NMGPDGRTTKDLYENQLHQYLIRDAVRDGNVLGFSIQYLSTFEETDHDI-TDEQVPGIDT  485
            N + DGR+T D++   LH YLI+DA++DGNVLGFS++Y++T+   + D  TDE V GI+T
Sbjct  405  NQSQDGRSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINT  464

Query  486  QEVYESEERLTKIVEHILLNHSHITKNKHYNAIFTVANTRMALKYYQLFRRLDPD--HNL  543
            +EV  S++R+  I  HI  NH   T+N++Y+AIFTV +    +KYY+ F+++  D  H L
Sbjct  465  DEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPL  524

Query  544  KVTTIFTWAANEDDNEEHQKQDDVTSRMGLDQVVKDYNQMYGTDFSTDKFKDYFADVSKR  603
            KV+ +F+ AANE+ NE +   D+  SR  L++V++DYN  +GT+FSTD F++YF ++SK 
Sbjct  525  KVAGVFSYAANEERNEGE--VDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKN  582

Query  604  MRDHNDQTPTDNIDILIVVNMFLTGFDSKRLSTLYVDKNLQWHGLIQAFSRTNRVEGKQK  663
            ++        ++ID+LIVVNMFLTGFDSK L+TLYVDKNL+ H+LIQA+SRTNRVE   K
Sbjct  583  VK---KGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETK  639

Query  664  PFGNIIAYRNIKNKTDEAVALFSDGDSSG-FLAPDYDELKAEFTDKIGQLLTVTPDVQSV  722
            PFG+I+ YR++K++TD+A+ LFS+ + ++  L  DYDE KAEF D +++L +V+   Q +
Sbjct  640  PFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDM  699

Query  723  DDLYNRGDDALYEFVMAFRAVLRVYNRIRVYDDFEWAQYEPEFSDQLMEAFRGKYFTAYQ  782
            D++  ++++    FV AFR V ++  R++ +D+F+ ++ +   ++Q  E +++KYF+ Y+
Sbjct  700  DQV--QDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYD  757

Query  783  TIYQRKTQ-ERVSILDDVDFDISLLETDTINVDYIVNLISGIDLMSSTERKQDIQKIEHL  841
             +  ++ + E+VSIL+D+DF+I +L  D INV YI++L+  IDL   +E++++ ++I ++
Sbjct  758  EVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRM  817

Query  842  LDNATNDQLKSKVELLEQFLNEVLPTLDTDDDIGMSLSNFMAESQRAAIKGFSQEHHLSE  901
            LDNA +  L+ K +LL +F+++V+P L  +D+I+ +   F    + + ++ F+Q++ + E
Sbjct  818  LDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDE  877

Query  902  DFVNEQISDYNFYGKTKDKEIIDKLSANGLGFREKRQAKREIKDFVSTIDRKYS  955
            + +++  ++Y++ G  ++ ++ + ++ + L  REKRQ+K+ +  FV  +  KYS
Sbjct  878  QVLKDITGEYEYSGIVNQDHLKELVGDKKL--REKRQTKKAVTSFVEEVSEKYS  929

58) hsdR in NC_020229


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  698 bits (2640),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/954 (44%), Positives = 681/954 (72%), Gaps = 33/954 (3%)

Query  7    QSEAELENHLIRKLQSIGYHYVEIPDVETLNTHFRAVLSERNQERLKGTPLSDREFQAVL  66
            QSE  LE +++ +L+S GY+ V I + + L  +FR++L+ER+ ++L+G PL+D+EFQ +L
Sbjct  4    QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  67   NDLIGAKTHYQVAQILRGSVVQPTGKINIKRDDDSSLYLEIFNGKQFDQNIFEVSHQMTV  126
              +I +K  ++ A+ILR+       K+ +KRDD+S +YL +++ ++  QN F++++Q++V
Sbjct  64   T-MINGKGIFESARILRD-------KMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSV  115

Query  127  EGRHENRYDVLILINGMPIAQIELKRQGVEFTQAFNQIIRYRTESYAQAKLMRLVQVFVI  186
            ++    RYDV ILING+P+ QIELKR+G+++ +AFNQ++RYR ++Y+   L R +Q+F+I
Sbjct  116  DDTYKARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTG--LFRYIQLFII  173

Query  187  SNGNETRYFANGDGELNSNFMFYWTDEHNNWLNDLDAFTTTFLSKPRLHSLIAKYTVFDS  246
            SNG +TRY++N DGE+  + MFYW+D +NN++N L+ FT TFL   ++  +I++Y +++ 
Sbjct  174  SNGIDTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNE  233

Query  247  GDHKMLLMRPYQIYATEAIIKQAIDHPHENGYVWHTTGSGKTITSFKASQLLLQETDAEK  306
             D+ ++ MRPYQ+ A EA+I QA + ++ NGY+WHTTGSGKT+TSFKASQ+L ++ D  K
Sbjct  234  TDNILMAMRPYQVHAVEALIHQATETSN-NGYIWHTTGSGKTLTSFKASQVLSEQDDIKK  292

Query  307  VIFMIDRADLDIQTVKNFSAYLPETTGGQSPLDRTDNTAALVKQLSSNDNGLIVTTIQKM  366
            VIF++DR DLD QT  +F+ +      +++++D+T+NTA LVKQL  +   LIVTTIQKM
Sbjct  293  VIFLVDRKDLDSQTEEEFNKF------SKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKM  346

Query  367  NNAVSNDRYKDILTPYHDRKVIFIEDESHRSQMGEMRKNVNHWFKNAQHFGFTGTPIFQQ  426
            ++A+ N+   + L  Y   KV+FI DE HRSQ G+M++ V + F+NAQ FGFTGTP F++
Sbjct  347  SKAIQNN--AEALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEE  404

Query  427  NMGPDGRTTKDLYENQLHQYLIRDAVRDGNVLGFSIQYLSTFEETDHDI-TDEQVPGIDT  485
            N + DGR+T D++   LH YLI+DA++DGNVLGFS++Y++T+   + D  TDE V GI+T
Sbjct  405  NQSQDGRSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINT  464

Query  486  QEVYESEERLAKIVEHILLNHSHITKNKHYNAIFTVANTRMALKYYQLFRKLDPD--HNL  543
            +EV  S++R+  I  HI  NH   T+N++Y+AIFTV +    +KYY+ F+K+  D  H L
Sbjct  465  DEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPL  524

Query  544  KVTTIFTWAANEDDNEEHQKQDDVTSRMGLDQVVKDYNQMYGTDFSTDKFKDYFADVSKR  603
            KV+ +F+ AANE+ NE +   D+  SR  L++V++DYN  +GT+FSTD F++YF ++SK 
Sbjct  525  KVAGVFSYAANEERNEGE--VDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKN  582

Query  604  MRDHNDQTLTDNIDILIVVNMFLTGFDSKRLSTLYVDKNLQWHGLIQAFSRTNRVEGKQK  663
            ++    +   ++ID+LIVVNMFLTGFDSK L+TLYVDKNL+ H+LIQA+SRTNRVE   K
Sbjct  583  VKKGVKD---NKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETK  639

Query  664  PFGNIIAYRNIKNKTDEAVALFSDGDSSG-FLAPDYDELKAEFTDKIGQLLTVTPDVQSV  722
            PFG+I+ YR++K++TD+A+ LFS+ + ++  L  DYDE KAEF D +++L +V+   Q +
Sbjct  640  PFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDM  699

Query  723  DDLYNRGDDALYEFVMAFRAVLRVYNRIRVYDDFEWAQYEPEFSDQLMEAFRGKYFTAYQ  782
            D++  ++++    FV AFR V ++  R++ +D+F+ ++ +   ++Q  E +++KYF+ Y+
Sbjct  700  DQV--QDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYD  757

Query  783  TIYQRKTQ-ERVSILDDVDFDISLLETDTINVDYIVNLISGIDLMSSTERKQDIQKIEHL  841
             +  ++ + E+VSIL+D+DF+I +L  D INV YI++L+  IDL   +E++++ ++I ++
Sbjct  758  EVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRM  817

Query  842  LDNATNDQLKSKVELLEQFLNEVLPTLDTDDDIGMSLSNFMAESQRAAIKGFSQEHHLSE  901
            LDNA +  L+ K +LL +F+++V+P L  +D+I+ +   F    + + ++ F+Q++ + E
Sbjct  818  LDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDE  877

Query  902  DFVNEQISDYNFYGKTKDKEIIDKLSANGLGFREKRQAKREIKDFVSTIDRKYS  955
            + +++  ++Y++ G  ++ ++ + ++ + L  REKRQ+K+ +  FV  +  KYS
Sbjct  878  QVLKDITGEYEYSGIVNQDHLKELVGDKKL--REKRQTKKAVTSFVEEVSEKYS  929

59) Ilyop_2857 in NC_014634


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  692 bits (2618),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 436/956 (46%), Positives = 683/956 (72%), Gaps = 50/956 (5%)

Query  1    MCIQSEAALENKLLEQLKAQGYEQIHIKDEDELKSNFR-----KQLEKHNKIELSDREFS  55
            M  QSE ALE  ++EQLK++GYE + I++E++L  NFR     ++ +K N   L+D+EF 
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   KVLIHLDGGSVFDKAKKLRDKFELKRDNDDIFYIEFFNCKDWCRNIFQISNQISMTGKYK  115
            ++L  ++G ++F+ A+ LRDK  LKRD++   Y+ F++ ++WC+N FQI+NQ+S+ + YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  NRYDVTILINGLPLVQIELKRSGIELKEAFNQINRYHKHSYRGLFNYVQLFVISNGVNTK  175
             RYDVTILINGLPLVQIELKR GI+++EAFNQ+ RY+K++Y GLF Y+QLF+ISNG++T+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  176  YYANNKTQSFK-QTFFWTDIENKRYSRLNEFAETFLDKCHLAKMISKYIVLHESDKILMA  234
            Y +NN  + +K + F+W+D EN+R + LNEF+ETFL  CH+AKMIS+Y++L+E+D+ILMA
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  235  LRPYQYFAVEKIVNRVENSPTKNGYIWHTTGSGKTLTSFKASQIITQNKNVDKVMFVVDR  294
            +RPYQ  AVE ++++  ++ ++NGYIWHTTGSGKTLTSFKASQ+++++ ++ KV+F+VDR
Sbjct  241  MRPYQVHAVEALIHQATET-SNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDR  299

Query  295  KDLDYQTIKEFDAFSKGSVNGTDDTGHLVKQltddktkliittiqklNNAISKGHLQRKM  354
            KDLD QT  EF+ FSKGSV+ T++T++LVKQL D    LI+TTIQK+++AI +      +
Sbjct  300  KDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNN--AEAL  357

Query  355  EVAKDKRMVFIFDECHRSQFGGTATTKGTHQKIKEFFSNKQFFGFTGTPIFAENSIKN-K  413
            +  K  ++VFI+DECHRSQFG      + H+ +++ F+N Q+FGFTGTP F EN  ++ +
Sbjct  358  DQYKTDKVVFIIDECHRSQFG------DMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGR  411

Query  414  TTVDLFDECLHKYVIKDAINDDNVLGFSVEYYNTFKSHLTDEEGNDLPVDDIRVEGIDTR  473
            +T D+F+ CLH Y+IKDAI+D+NVLGFSV+Y NT+K++  D E ++L      VEGI+T 
Sbjct  412  STADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDEL------VEGINTD  465

Query  474  EVFRAEERLDGVAEFIINNHARKTYGKEFTSIFAVDSVESLLKYYNIFKSK----DHNLK  529
            EV  +++R++ +A  I +NH + T  +++++IF+V+S+ +L+KYY+ FK      +H LK
Sbjct  466  EVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLK  525

Query  530  IATIFSYQANEEDPDANGYTEEEEEKTGLHTRDKLDMIIKDYNETFGDNHDLNRENGFNA  589
            +A +FSY ANEE  ++        E    H+R+KL+ +I+DYN  FG N      + F+ 
Sbjct  526  VAGVFSYAANEERNEG--------EVDEAHSRGKLEEVIQDYNLNFGTNFS---TDTFQE  574

Query  590  YYVDISKK----VKDRKIDLLLVVNMFLTGFDSKSLNTLYVDKNLKHHGLIQAFSRTNRI  645
            Y+ +ISK+    VKD KID+L+VVNMFLTGFDSK LNTLYVDKNLK H+LIQA+SRTNR+
Sbjct  575  YFNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRV  634

Query  646  LNEKKKHGNIVCFRNLKKRTDEAITLFSNKDAIETVLMKPYEHYVEDFNKHILELYDIAP  705
             +E K  G+IV +R+LK+ TD+A+ LFS+ +  + VLM+ Y++Y  +F   + EL  +A 
Sbjct  635  EKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVAL  694

Query  706  TVDSVDYLQSEDDKAKFVQAYRNLLRLMTRLFSFNEFSF--DYLHMGRQTFEDYKSKYLD  763
              + +D +Q E++K  FV+A+R + +L+ RL +F+EF F    + M  Q FEDYKSKY+ 
Sbjct  695  KPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFA  754

Query  764  IYE---YRKGDKEKVSILDELDFEVELIRRDDVNVAYIMTLLKDLD-TGSASFVKDKEFI  819
            IY+    ++G+ EKVSIL+++DFE+E++R D +NV+YIM L++++D  + A   ++++ I
Sbjct  755  IYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQI  814

Query  820  LRTMEGSED--LRSKRELIEKFIEENLPHIDDGGDVeskfeeflvaeeereVDAFVAQEN  877
             R ++ ++D  LR KR+L+  FI++ +P++ + ++++  +  F  A  E E + F  Q+ 
Sbjct  815  RRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQA  874

Query  878  LHRSKVEETMEEYRYSNKMQRDFIKAAFIRKPPLKERKVKIPMIADKIREIIHKYT  933
            ++   + +   EY YS  +++D +K  ++    L+E++     ++  + E+ +KY+
Sbjct  875  VDEQVLKDITGEYEYSGIVNQDHLK-ELVGDKKLREKRQTKKAVTSFVEEVSEKYS  929

60) HSDR in NC_005090


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  691 bits (2612),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 424/879 (49%), Positives = 631/879 (72%), Gaps = 43/879 (4%)

Query  1    MSTQSEAILEENLLKQLVSLGYEKVLIRDEAELLANLKAQL-ERH-NKI---TLDDMEFS  55
            M  QSE  LE +++ QL S GYE V IR+E +LL N+++ L ERH +K+    L D EF 
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   RILNHLNKGNVFEKAKILRDKFALTREDGTTKYIEFLDTERWCQNLFQVTHQVTIEGSYK  115
            R+L  +N   +FE A+ILRDK +L R+D +  Y+ FLDT +WCQN FQ+T+QV+++++YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  NRYDVTILINGLPLVQIELKRRGLELKEAFNQINRYQRHSYGANSALFHYVQIFVISNGV  175
             RYDVTILINGLPLVQIELKRRG++++EAFNQ+ RY++++Y   ++LF+Y+Q+F+ISNG+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFIISNGI  177

Query  176  NTKYYANNRNQSFK-QTFFWADKENKNITNLNEFTDLFLEPCHISKMICKYVVLAEATKT  234
            +T+Y +NN  + +K + F+W+DKEN+ I  LNEFT+ FL PCHI+KMI +Y++L E+ + 
Sbjct  178  DTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNI  237

Query  235  LMILRPYQYHATEAIIDRVVNTNKNGYIWHTTGSGKTLTSFKTAQILMKLPNVHKVVFVV  294
            LM +RPYQ HA EA+I++  +T++NGYIWHTTGSGKTLTSFK++Q+L    ++ KV+F+V
Sbjct  238  LMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLV  297

Query  295  DRKDLDYQTTKEFNSFSQGSVDGTDNTASLVRQFSDDT-RLIVTTIQKLNTAINKQRYLE  353
            DRKDLD QT  EFN FS+GSVD T+NTA LV+Q+ D +  LIVTTIQK++ AI+++   E
Sbjct  298  DRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNA--E  355

Query  354  KMKNLRDKRIVFIFDECHRSQFGDTHRNITKFFNNYQMIGFTGTPIFADNATGNKFGKRT  413
             + + +  ++VFI+DECHRSQFGD HR + + FNN Q +GFTGTP F +N + +    R+
Sbjct  356  ALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQD---GRS  412

Query  414  TKELFDECLHKYVITDAIADENVLKFSVEYIGRYKEREGSQNNLDIEVEDIDTKELLESP  473
            T ++F+ CLH Y+I DAI D NVL FSV+YI   K ++   +  ++ VE+I+T E+  S 
Sbjct  413  TADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDEL-VEGINTDEVWLSD  471

Query  474  ERLEKIVDYIIAHHDRKTHSKEFTAMMCVSSVDVLTKYYELFRSK----QHGLKIATIFS  529
            +R+E I   I  +HD+ T++++++A+  V S+  L KYY+ F+      +H LK+A +FS
Sbjct  472  QRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFS  531

Query  530  YSTNEDDKDANGLDSLEESDGAHVDEEHINMHSRDKLEEYIAHYNTMFGTNFTTKDSQSF  589
            Y++NE+ ++++            VDE     HSR+KLEE I +YN  FGTNF+T   Q +
Sbjct  532  YAANEERNEGE------------VDEA----HSRGKLEEVIQDYNLNFGTNFSTDTFQEY  575

Query  590  YNYYN-DISKRVKNQEVDILLVVNMFLTGFDSKTLNTLYVDKNLKYHGLIQAFSRTNRIL  648
            +N  + ++ K VK++ +D+L+VVNMFLTGFDSK LNTLYVDKNLKYH+LIQA+SRTNR+ 
Sbjct  576  FNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVE  635

Query  649  NEKKSQGNILCFRNLKKATDAAIALFSNKNAKEIILMKSYEEYVEKFIEALKKLKEIAPT  708
            +E K+ G+I+ +R+LK+ TD A+ LFS+ +  + +LM+ Y+EY   F++AL  LK +A  
Sbjct  636  KETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALK  695

Query  709  IDSVDSLYDEESKLEFIKAFRELMRIQNILGSFADFSF--ADLGIAEQEFEEYKSKYLDI  766
             + +D + DE+ K  F+ AFR + ++   L +F +F F  A++G+ EQEFE+YKSKY+ I
Sbjct  696  PQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAI  755

Query  767  HDTI--KREGKEKVSILEDVDFELELIHKDEINVTYILKLLAQ--LKDASEQEHQTQRQn  822
             D +  KR   EKVSIL+D+DFE+E++++D INV+YI+ L+ Q  LKD +EQ+++ ++  
Sbjct  756  YDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIR  815

Query  823  iiniingnAQLRSKRELIERFIDAHLMSLEDIDMVDGAF  861
             +    +++ LR KR+L+  FID  +  L + D +D A+
Sbjct  816  RMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAY  854

61) Mbur_1841 in NC_007955


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 418/918 (46%), Positives = 656/918 (72%), Gaps = 41/918 (4%)

Query  1    MSTQSEAVLEEQLVGQLCELGYSLVRIKDEAELIANLKGQL-EKHNEIV----FSDNEFK  55
            M  QSE  LE +++ QL   GY  V I++E +L+ N+++ L E+H + +    ++D+EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   KVMNLLSKGSVFEKAKNLREKQHILRDNGDDLYFDFLNTEHWCQNEYQVTHQVAMEGKYK  115
            +++ +++  ++FE A+ LR+K  + RD+  ++Y+ FL+T HWCQN +Q+T+QV++++ YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  NRYDVTLLVNGLPLVQIELKRRGLELKEAFNQIQRYQKHSFGSHAALFQYIQIFVISNGV  175
             RYDVT+L+NGLPLVQIELKRRG++++EAFNQ+ RY+K+++   ++LF+YIQ+F+ISNG+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFIISNGI  177

Query  176  NTKYYANNRKQSFK-QTFYWTDEENQRLSNILNGFTRDFLDPCNLSKMICRYIVLNEAQK  234
            +T+Y +NN  + +K + FYW+D EN+R+ N LN FT  FL PC+++KMI RY++LNE+++
Sbjct  178  DTRYISNNDGEIYKSHMFYWSDKENNRI-NTLNEFTETFLRPCHIAKMISRYMILNETDN  236

Query  235  ILMVLRPYQFYAVEALIDRVKHSHKNAYIWHTTGSGKTLTSFKASQILTKLPTvkkvvfv  294
            ILM +RPYQ  AVEALI++  ++ +N+YIWHTTGSGKTLTSFKASQ+L+    +KKV+F+
Sbjct  237  ILMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFL  296

Query  295  vdrkdldYQTTKEFNSFSKGCIDGTDNTKQLVKQLSDDT-ALIVTTIQKLNVAISKKQYL  353
            VDRKDLD QT  EFN FSKG +D T+NT QLVKQL D + +LIVTTIQK++ AI ++   
Sbjct  297  VDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNA--  354

Query  354  EKMEQLRDQRIVFIFDECHRSQFGETHKRINQFFKNPQMFGFTGTPIFAENAIKNESGRR  413
            E ++Q + +++VFI+DECHRSQFG+ H+ + Q F+N+Q FGFTGTP F EN  ++    R
Sbjct  355  EALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDG---R  411

Query  414  TTKDLFGECLHKYVITDAIADENVLKFSVEYVGRYKQKEGRETSIDIEVEDIDTNELMES  473
            +T D+FG CLH Y+I DAI D NVL FSV+Y+   K  +  +T  D  VE+I+T+E+  S
Sbjct  412  STADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKA-QNIDTETDELVEGINTDEVWLS  470

Query  474  PERLEKISDYIIAHHSRKTHNREFTAIFTVSSIKTLINYYDILQRKKAEGKHDLKIATIF  533
             +R+E I+  I  +H + T+NR+++AIFTV SI +L++YYD +++   +  H LK+A +F
Sbjct  471  DQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVF  530

Query  534  SYTANEEDPDANGFFSDDTQILDPKAKYGSTISKHSREKLDEYIEDYNKLFNSKFSTKDS  593
            SY+ANEE  +                  G     HSR KL+E I+DYN  F ++FST   
Sbjct  531  SYAANEERNE------------------GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTF  572

Query  594  QSFYNYYN-DISKKVKEKKIDILIVVNMFLTGFDSPFLNTIYVDKNLKYHGLIQAYSRTN  652
            Q ++N  + ++ K VK++KID+LIVVNMFLTGFDS  LNT+YVDKNLKYH+LIQAYSRTN
Sbjct  573  QEYFNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTN  632

Query  653  RILNEQKSQGNVVAFRNLKKATDAAITLFSNTEAIEVIIMQPYEDYIAKFDEKYDALQRI  712
            R+ +E K+ G++V +R+LK+ TD A+ LFS+TE  + ++M+ Y++Y A F +    L+ +
Sbjct  633  RVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAV  692

Query  713  TPTVESVNTLSSENEELEFITTFREIMRILNITKAFADFKWS--DLSMTEQLFEDYKSKY  770
            +   + ++ +  ENE   F+ +FR + +++   KAF +F  +  +++M EQ FEDYKSKY
Sbjct  693  ALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKY  752

Query  771  LDLYDKVKSDH-QKEKVSILEDVDFELELIHRDEINVNYIIQLLIQLKFDAQKDVDQVEK  829
            + +YD VK+ + + EKVSIL+D+DFE+E+++ D INV+YI++L+ Q+ +  + + ++   
Sbjct  753  FAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRD  812

Query  830  EISRVL--SSESTLRSKKELIEKFIQENLPDIHTSDSVSEEFDQFWNNEQQKAFEQLVKD  887
            +I R+L  + ++TLR K++L+  FI++ +P++   D++ E +  F N  ++  F+Q+ ++
Sbjct  813  QIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQ  872

Query  888  EVLSEERTQKLIENYLYA  905
            + + E+  + +  +Y Y+
Sbjct  873  QAVDEQVLKDITGEYEYS  890

62) hsdR in NC_020054


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  672 bits (2542),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/959 (44%), Positives = 666/959 (70%), Gaps = 50/959 (5%)

Query  1    MATQSEQALEENLIRQLVGLSYKQVVIKDEKELLANLKTQL-----EKHNNVQLDDKEFA  55
            M  QSE ALE +++ QL + +Y  V I++E++LL N+++ L     +K N   L DKEF 
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   QVLNYLNKGNVFDRAKILRDKMQLTRTDGNILYLEFINQEFWCQNQYQVTNQITIEGSYK  115
            ++L  +N   +F+ A+ILRDKM L R D + +YL F++   WCQN++Q+TNQ++++++YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  NRYDVTILINGLPLAQIELKRRGLELKEAFNQTNRYQKHSYSAGYALFNYVQLFVISNGV  175
             RYDVTILINGLPL QIELKRRG++++EAFNQ  RY+K++Y+   +LF Y+QLF+ISNG+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLFRYIQLFIISNGI  177

Query  176  NTKYYANNRKQSFK-QTFYWSDIENKPIKQLDAFAQVFLEPCHLSKMITRYIVLP-TTNV  233
            +T+Y +NN  + +K + FYWSD EN+ I+ L+ F++ FL PCH++KMI+RY++L  T N+
Sbjct  178  DTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNI  237

Query  234  LMVFRPYQYYAVEAIIERVRTGNKNGYIWHTTGSGKTLTSFKASQLLSAMPQVHKVVFVV  293
            LM  RPYQ  AVEA+I++    ++NGYIWHTTGSGKTLTSFKASQ+LS   ++ KV+F+V
Sbjct  238  LMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLV  297

Query  294  DRKDLDYQTQREFDTFAKGSVDTTDNTSKLVAQFADDS-RIIVTTIQKLNTAISKGRHQL  352
            DRKDLD QT+ EF+ F+KGSVD T+NT++LV Q+ D S  +IVTTIQK++ AI +  + L
Sbjct  298  DRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEAL  357

Query  353  KMDKLKDKRIVFIFDECHRSQFGATHKRIKDFFSNSQLFGFTGTPIFADNAVKNELGKRT  412
              D+ K  ++VFI+DECHRSQFG  H+ +++ F+N+Q FGFTGTP F +N  ++    R+
Sbjct  358  --DQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDG---RS  412

Query  413  TKELFEECLHKYVITDAIRDENVLRFSVEYVGRYKYKDDSRAELDIDVEAIDTKELMESE  472
            T ++F  CLH Y+I DAI+D NVL FSV+Y+   K  ++  +E D  VE+I+T E+  S+
Sbjct  413  TADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIK-AQNIDTETDELVEGINTDEVWLSD  471

Query  473  DRLNKIVDYIIANHNRKTHSKEFSAMLCVSNVDMLTRYYEAFQQKKEAGKHNLRLATIFT  532
            +R++ I   I  NH++ T+++++SA++ V ++  L +YY+AF++      H L++A +F+
Sbjct  472  QRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFS  531

Query  533  YAANEDDKDANGNIPDEEVDVPEGASVNQHSRDKLESYISDYNAMYGTKYSTKDSLSFQN  592
            YAANE+ ++++ +              + HSR+KLE  I DYN  +GT++ST    +FQ+
Sbjct  532  YAANEERNEGEVD--------------EAHSRGKLEEVIQDYNLNFGTNFSTD---TFQE  574

Query  593  YYKDIAKRLKERERDGFLDSDRLDILLVVNMFLTGFDAKKLNTLYVDKNLRYHGLLQAFS  652
            Y+++I+K +K   +D     +++D+L+VVNMFLTGFD+K LNTLYVDKNL+YH+L+QA+S
Sbjct  575  YFNHISKNVKKGVKD-----NKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYS  629

Query  653  RTNRILNEQKSQGNIVCFRNLKAATDEAITLFSNKEAIEEIIMQPFEDYVDKFDKAYEHL  712
            RTNR+ +E K+ G+IV +R+LK  TD+A+ LFS+ E  + ++M+ +++Y   F  A  +L
Sbjct  630  RTNRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAEL  689

Query  713  ISLTPTVDSVDDLPSEDEELEFVKAFRALIRLKNILSC--fsdfsfdsLQMDEQTFEDYK  770
             +++   + +D++  E+E   FV AFR + +L   L      DF+  ++ M+EQ FEDYK
Sbjct  690  KAVALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYK  749

Query  771  SKYLDLYDKVKSN-VHKEKESILEDVDFELELIQRDEINVSYILRLLAALVAAKPADKER  829
            SKY+ +YD VK++  + EK SIL+D+DFE+E+++ D INVSYI+ L+  +     A+++R
Sbjct  750  SKYFAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQR  809

Query  830  KKQEIKKLLDS--EVKLRSKRELIEKFIAENLPHVDSAAAVPQSFDEFIQLERSKALDKL  887
            ++++I+++LD+  +  LR KR+L+  FI + +P++     + +++  F +  R   ++++
Sbjct  810  NRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQF  869

Query  888  TEEEKLDKGGLQQLVNNFLFTEREPLNDDVVAILTEKPKLLQRKAIVQRIKDKILDFVE  946
            ++++ +D   L+++  ++ ++    +N+D +  L    KL +++    + K  +  FVE
Sbjct  870  AQQQAVDEQVLKDITGEYEYS--GIVNQDHLKELVGDKKLREKR----QTKKAVTSFVE  922

63) hsdR2 in NC_021355


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  667 bits (2520),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 423/936 (46%), Positives = 674/936 (73%), Gaps = 32/936 (3%)

Query  1    MPIQSEETLEKNLIAQLQENGYEYVNVKNEDELKENFRLQL-----EKLNNCSFSDVEFD  55
            M  QSE +LE +++ QL+ NGYE V ++NE++L +NFR  L     +KLN  +++D EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   RILVYLDSGSIFDKAKKLRDKYYVDRDKDS-FYIKFLNTKEWCKNIFQVANQITVHGLHE  114
            R+L  +++ +IF+ A+ LRDK  + RD +S  Y+ FL+T++WC+N FQ++NQ++V++   
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  115  NRYDVTILINGLPLVQIELKRRGGNIKEAFDQIIRYKSHSYSGLFNYIQLFVISNGVNTK  174
             RYDVTILINGLPLVQIELKRRG +I+EAF+Q++RY+ ++Y+GLF YIQLF+ISNG++T+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  175  YFANGSKNDLNFEFTFFWKDVKNNNYHSLDQFTDTFLEKCNIAEIISKYMILNESSKTLM  234
            Y++N    ++     F+W D  NN  ++L++FT+TFL  C+IA +IS+YMILNE+ + LM
Sbjct  181  YISNND-GEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILM  239

Query  235  VLRAYQIYAVKAVLHQALEVKQNGYIWHTTGSGKTITSYKVSQLLAEDESIYKVLFIVDR  294
             +R+YQ+ AV A++HQA E  +NGYIWHTTGSGKT+TS+K SQ+L+E++ I KV+F+VDR
Sbjct  240  AMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDR  299

Query  295  RDLDIQTNKEFNSFCNGCVNETKHTGALIKHltttgngklvtttIQKLSKAVKTRGDMKK  354
            +DLD QT+ EFN F +G V+ T++T+ L+K+     +  L+ TTIQK+SKA++  ++   
Sbjct  300  KDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQ-LKDKSLPLIVTTIQKMSKAIQNNAEA--  356

Query  355  LQDIRDKNIILIYDECHRSQFGEMHQSIINFFNNALSFGFTGTPIFEEN-SNGLKTTKSI  413
            L++ +  ++++I DECHRSQFG+MH+ + + FNNA  FGFTGTP FEEN S++ ++T  I
Sbjct  357  LDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADI  416

Query  414  FGKRLHEYSIKDAIADNNVLGFSIDYFGGAKML---TETDLEVEGIDKREYFESDKRLNQ  470
            FG+ LH Y IKDAI D NVLGFS+DY+   K     TETD  VEGI+  E   SD+R++ 
Sbjct  417  FGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVEL  476

Query  471  IVDYIIKSYDNKTKNREFNAMFTVARGGVIHKYYDLFKKKKDEGKHNLKVATIFTYVANE  530
            I   I  + D+ T+NR+++A+FTV     + KYYD FKK   +  H LKVA +F+Y ANE
Sbjct  477  IARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANE  536

Query  531  DLSD---NKQLSRDKLDKYMDDYNEMFGTNFSTDDFKAYYVDVSKR----MKNREIDLLL  583
            + ++   +   SR+KL+  ++DYN  FGTNFSTD F+ Y+ ++SK     +K+  ID+L+
Sbjct  537  ERNEGEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLI  596

Query  584  VVDMFLTGFDSKLLNTLYVDKNLQYHGLLQAFSRTNRIYNMRKSHGNIICFRNLKENTDR  643
            VV+MFLTGFDSK+LNTLYVDKNL+YH+L+QA+SRTNR+ +  K+ G+I+ +R+LK+NTD 
Sbjct  597  VVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDN  656

Query  644  AIRLFSDSNASEDIILPPYGFFVDKFNKEAEKFYSLVETVNDAVNLQSEKDKKQFVLNFR  703
            A++LFS+++ ++ +++  Y+ +   F      + ++    +D  ++Q E++KK FV  FR
Sbjct  657  ALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFR  716

Query  704  ELSRILNKMNTFSEFSY--DDIEMTEQDFSDYKSIYFDIHDELKS--PDKEKVSVLDDID  759
             +S+++ ++++F EF +   +I M EQ+F DYKS YF I DE+K+   + EKVS+L+DID
Sbjct  717  LVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDID  776

Query  760  FELELLRNDKINVDYILNILKTMDPKDSSFEHDKKR--ILNIMQETEH--LRSKISLIEK  815
            FE+E+LRND+INV YI+++++ +D KD + E++++R  I  +++++++  LR K  L+  
Sbjct  777  FEIEILRNDRINVSYIMDLVRQIDLKDKA-EQQRNRDQIRRMLDNADDPTLRLKRDLLRE  835

Query  816  FIDEELGNINDKDLSFNEVFDGFMSKERENAILDIISEEDLNEKIARQIFDYYEYSGKLD  875
            FID+ + ++++ D +++E +  F +  RE+ + ++  ++ ++E++ ++I + YEYSG ++
Sbjct  836  FIDDVIPELSEED-NIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVN  894

Query  876  EDKLKKSFNHNLKFKERRNKVKEVKNMIENFHEKFD  911
            +D LK    ++ K++E+R+  K V + +E+  EK+ 
Sbjct  895  QDHLKELVGDK-KLREKRQTKKAVTSFVEEVSEKYS  929

64) Saut_1342 in NC_014506


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  661 bits (2497),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 417/942 (45%), Positives = 661/942 (71%), Gaps = 46/942 (4%)

Query  1    MSTQSEAVLEANLIKQLVDLEYEKVTIKDDKWLEANLKTQL-EKH-NKF---TMSDTEFK  55
            M  QSE  LE++++ QL    YE VTI++++ L  N+++ L E+H +K+    ++D EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   RVLNHLNKGSVFEKAMILRDKFVLPLDDGTSKYIEFLDSEHWCQNLFQVSSQITVDGTYK  115
            R+L  +N  ++FE A ILRDK  L  DD +  Y+ FLD+ HWCQN FQ+++Q++VD+TYK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  NRYDVTLLINGLPLVQIELKRRGLEIKEAFNQINRYQRHSYSSNNALFNYVQVFVISNGV  175
             RYDVT+LINGLPLVQIELKRRG++I+EAFNQ+ RY++++Y+   +LF Y+Q+F+ISNG+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLFRYIQLFIISNGI  177

Query  176  DTKYFANNRKQSFK-QTFFWADVDNKNITNLEEFTNAFLERCHISKMICKYIVLAQVPKI  234
            DT+Y++NN  + +K + F+W+D +N+ I  L+EFT++FL  CHI+KMI +Y++L +  +I
Sbjct  178  DTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNI  237

Query  235  LMILRPYQFYATESIIDRVENSDKNGYIWHTTGSGKTLTSFKTAQILMKLPHVEKVVFVV  294
            LM +RPYQ  A E++I++  ++ +NGYIWHTTGSGKTLTSFK++Q+L    ++ KV+F+V
Sbjct  238  LMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLV  297

Query  295  DRKDLDYQTTKEFNSFSDGSVDGTDNTKALVKQFSDDT-KLIVTTIQKLNTAISKKQYLS  353
            DRKDLD QT  EFN FS GSVD T+NT  LVKQ+ D +  LIVTTIQK++ AI ++    
Sbjct  298  DRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNA--E  355

Query  354  QMEKLQDKHIVFIFDECHRSQFGETHLAITKFFHKNQMIGFTGTPIFAENAVGNKLGKRT  413
             +++ +   +VFI+DECHRSQFG+ H  + + F++ Q +GFTGTP F EN   +    R+
Sbjct  356  ALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQD---GRS  412

Query  414  TTELFDKSLHKYVITDAIADDNVLKFSVEYVGKYKDKEGSASNIDIDVENIDTKELLESD  473
            T+++F++ LH Y+I DAI D+NVL FSV+Y+   K ++  +   ++ VE I+T E+  SD
Sbjct  413  TADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDEL-VEGINTDEVWLSD  471

Query  474  ERIEKITDYIIANHPRKTHSKEFTAMMCVGSVDMLTKYYELFKSK----EHNLKIATIFS  529
            +R+E I+  I  NH + T++++++A+  V S+  L KYY+ FK      EH LK+A +FS
Sbjct  472  QRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFS  531

Query  530  YSANEDDKDADGIYELDESDGANVDEEHINQHSRDKLESYIGDYNALFGTKFTTRDSQSY  589
            Y+ANE+ ++++            VDE     HSR+KLE  I DYN  FGT+F+T   Q Y
Sbjct  532  YAANEERNEGE------------VDEA----HSRGKLEEVIQDYNLNFGTNFSTDTFQEY  575

Query  590  YNYYN-DISKKVKNREIDILLVVNMFLTGFDSPTLNTLYVDKNLKYHGLIQAFSRTNRIL  648
            +N  + ++ K VK+  ID+L+VVNMFLTGFDS  LNTLYVDKNLKYH+LIQA+SRTNR+ 
Sbjct  576  FNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVE  635

Query  649  NEKKSQGNIVCFRNLKKNTDDAIALFSNKDAKDIIIMQPYEEYVKYFNEAFAKLLQIAPT  708
            +E K+ G+IV +R+LK+NTD+A+ LFS+ +  D ++M+ Y+EY   F +A+A L  +A  
Sbjct  636  KETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALK  695

Query  709  VDSVDTLQGQGEDKVLEFVQTFRNIMRLKNILGSFSDFKWT--DLSMSAQEFEDYKSKYL  766
             + +D +Q++ E K   FV++FR + +L   L +F +F  T  +++M+ QEFEDYKSKY+
Sbjct  696  PQDMDQVQDENEKKA--FVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYF  753

Query  767  DLYEKIKSERGEGAEKVSILDDVDFELELIHKDEINVAYILQLLARYkdadekdkeaHKN  826
             +Y+ +K+ RGE  EKVSIL+D+DFE+E++++D INV+YI++L+ +    D  +++ +++
Sbjct  754  AIYDEVKPKRGE-VEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRD  812

Query  827  NIMSII--SGQTHLRSKKELIEKFINENMININDSDTIenefekfwekekeIAYDKLCSE  884
            +I  ++  +++  LR K++L+  FI++ + ++++ D I++ +  F +  +E  ++++  +
Sbjct  813  QIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQ  872

Query  885  ENLDCEKVKQVVDTYIYEERKPLKDDVAKTLKVKPKLLERKK  926
            + +D + +K++ + Y Y     +++D  K L    KL E+++
Sbjct  873  QAVDEQVLKDITGEYEYSG--IVNQDHLKELVGDKKLREKRQ  912

65) Q7A_2153 in NC_017857


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  659 bits (2490),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/934 (43%), Positives = 652/934 (70%), Gaps = 48/934 (5%)

Query  129   QSEAQLEAGLVNRLVSLGYERIVIESAQALKANLKRQLEIHNYDALNGQPLSEAEFTKVL  188
             QSE  LE+ ++++L S GYE + I + Q L  N++  L+ ++ D LNG+PL++ EF ++L
Sbjct  4     QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  189   NHLDKGNVFQRAKTLRDRFQFTRDDGSSCYLQFMNTAHWCQNQYQVTHQVTQIGKYENRY  248
               ++   +F+ A+ LRD+  + RDD S  YL F++T HWCQN++Q+T+QV+  + Y  RY
Sbjct  64    TMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYKARY  123

Query  249   DVTLLINGLPLVQIELKRRGIELKEAFNQINRYQRHSFWTDSGLFNYVQLFVISNGVNTK  308
             DVT+LINGLPLVQIELKRRGI+++EAFNQ+ RY+++++   +GLF Y+QLF+ISNG++T+
Sbjct  124   DVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFIISNGIDTR  180

Query  309   YYANNRKQDFK-QTFYWADEQNNLITQLDAFADVFLEKCHVSKMISKYIVLHESDKILMV  367
             Y +NN  + +K + FYW+D +NN I  L+ F++ FL  CH++KMIS+Y++L+E+D+ILM 
Sbjct  181   YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  368   LRPYQYYAVEAIENQVKNGRKHGYIWHTTGSGKTLTSFKAAQILTKLPKVYKVVFVVDRA  427
             +RPYQ  AVEA+ +Q  +  ++GYIWHTTGSGKTLTSFKA+Q+L+    + KV+F+VDR 
Sbjct  241   MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  428   DLDYQTTREFNFFSEGSVDGTDNTASLVKQMAGEN-KLIVTTIQKLNTAISKPRHEAAME  486
             DLD QT  EFN FS GSVD T+NTA LVKQ+ + +  LIVTTIQK++ AI +  +  A++
Sbjct  301   DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQN--NAEALD  358

Query  487   ALRDKRVIFIFDECHRSQFGETHKNIVKFFTKAQMFGFTGTPIFVENATSNEHGKRTTKD  546
               +  +V+FI+DECHRSQFG+ H+ + + F +AQ FGFTGTP F EN +   ++ R+T D
Sbjct  359   QYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQS---QDGRSTAD  415

Query  547   LFGECLHKYVITNAIADENVLKFSVEYWGKLKRKD-GSLIDEQVDKINKKQFFESDARIE  605
             +FG CLH Y+I +AI D NVL FSV+Y   +K ++ ++  DE V+ IN  +   SD R+E
Sbjct  416   IFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVE  475

Query  606   GVVDWIIANHNRKTHNKQFSAMLCVSNKDMLIKYYETFKRKKAAGEHDLRVVTIFTYAAN  665
              +   I  NH++ T+N+Q+SA++ V +   L+KYY++FK+     EH L+V  +F+YAAN
Sbjct  476   LIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAAN  535

Query  666   EEDEDANGLIGEPDFDIKTDDPKTRHTREKLESYVADYNAMYHTQHSVKDSKAFYIYYKD  725
             EE ++++  ++E+            H+R KLE  + DYN  + T+ S   + +F  Y+++
Sbjct  536   EERNEGE--VDEA------------HSRGKLEEVIQDYNLNFGTNFS---TDTFQEYFNH  578

Query  726   IAKRIKERDKESFQDKDRADILLVVNMFLTGFDAKKLNTLYVDKNLKYHGLIQAFSRTNR  785
             I+K +K   K+     ++ D+L+VVNMFLTGFD+K LNTLYVDKNLKYH+LIQA+SRTNR
Sbjct  579   ISKNVKKGVKD-----NKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNR  633

Query  786   ILGELKSQGNIVCFRNLKDNTDEAIKLFCDTNANEDILMEPYPFYVERFNHELEQVLALA  845
             +  E K+ G+IV +R+LK+NTD+A+KLF +T+  + +LM  Y  Y   F + L ++ A+A
Sbjct  634   VEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVA  693

Query  846   NTPDAVNDLKSEDAQFAFVQAFRQLLRTLNKLKPFT--DFTWSDLQLDEQTFEDFKSKYL  903
               P+ +++++ E+ + AFV+AFR + + + +LK+F   DFT +++ ++EQ FED+KSKY+
Sbjct  694   LKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYF  753

Query  904   DIYD---RSHDNEPGASILEEVDFELELIHRDEVNVAYILKLLGDIQASKTKSGNQADAD  960
              IYD     +++    SIL+++DFE+E+++ D +NV+YI+ L+ +I+       ++A+ +
Sbjct  754   AIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLK-----DKAEQQ  808

Query  961   KARQDVMSLLDK--EVQLRSKRELIEKFMQEYMPQITPEQDLTEIFAGFWHKEKRQAVHA  1018
             + R+++  +LD+  +  LR KR+L+  F+++ +P+++ E+++ E +  F +  +    + 
Sbjct  809   RNRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQ  868

Query  1019  LCEREQLNKDAVYRMIDDYNFTG---KDPLRDQV  1049
             + +++ ++ + +  + ++Y+++G   +D L++ V
Sbjct  869   FAQQQAVDEQVLKDITGEYEYSGIVNQDHLKELV  902

66) Runsl_3894 in NC_015703


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  658 bits (2488),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 414/914 (46%), Positives = 621/914 (68%), Gaps = 43/914 (4%)

Query  3    QTEGELEKKLIEALVKIGYKYVPIKDEAALAANLKT-----QIEKHNNVTLTDKEFAQVL  57
            Q+E  LE  ++E L   GY  V I++E  L  N+++     + +K N   LTDKEF ++L
Sbjct  4    QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  58   NHLNKGNIWDKAKILRDKMQLTKEDGRSVYIEFLNQEGWCQNEFQVTSQVTVEGSYKNRY  117
              +N   I + A+ILRDKM L ++D   VY+ FL+   WCQN FQ+T+QV+V+++YK RY
Sbjct  64   TMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYKARY  123

Query  118  DVTILINGLPLAQIELKRRGLQLKEAFNQTNRYQRHSYNANDALFQYIQIFVISNGVNTK  177
            DVTILINGLPL QIELKRRG++++EAFNQ  RY++++Y    +LF+YIQ+F+ISNG++T+
Sbjct  124  DVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLFRYIQLFIISNGIDTR  180

Query  178  YYSNNARQHF-NQTFYWSDVNNDLITDLFAFTDVFLEPCHLSKMITRYVVLAEEKKCLMV  236
            Y SNN  + + ++ FYWSD +N+ I  L  FT+ FL PCH++KMI+RY++L E  + LM 
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  237  LRPYQYFAVEKIIDRVKTTRNDGPHKNGYIWHTTGSGKTLTSFKASQVLMNQAGVHKVVF  296
            +RPYQ  AVE +I++   T N     NGYIWHTTGSGKTLTSFKASQVL +Q ++ KV+F
Sbjct  241  MRPYQVHAVEALIHQATETSN-----NGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIF  295

Query  297  VVDRKDLDYQTTKEFNSFSDGSVDGTDNTNKLVQQFTDDT-KLIVTTIQKLHNAISKKQY  355
            +VDRKDLD QT  EFN FS GSVD T+NT +LV+Q+ D +  LIVTTIQK+ +AI ++  
Sbjct  296  LVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNA-  354

Query  356  LARMEKQKDKRIVFIFDECHRTQFGKTHGAIKAFFTNNQMFGFTGTPIFKDNAASYDGLK  415
               +++ K  ++VFI+DECHR+QFG  H  ++  F N Q FGFTGTP F +N +  DG  
Sbjct  355  -EALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQ-DG--  410

Query  416  RTTKDLFEECLHKYVITDAIKDQNVLKFSVEYVGKYRRKDSVNEIDIEVEDIDTKELMES  475
            R+T D+F  CLH Y+I DAI D NVL FSV+Y+   + ++   E D  VE+I+T E+  S
Sbjct  411  RSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLS  470

Query  476  DVRIDKVSDYIIANHDRKTHSRAFTAMFCVSNIDTLSKYYDALAKKKAEGRHNLRIATIF  535
            D R++ ++  I  NHD+ T++R ++A+F V +I +L KYYDA+ K   +  H L++A +F
Sbjct  471  DQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVF  530

Query  536  SYTANEDDKDATGLDADILDDTAPINLHSRDKLEKYIADYNQLFGTKHSTKDSQAFYTYY  595
            SY+ANE+ +++   +A           HSR+KLE  I DYN  FGT+ ST   ++F  Y+
Sbjct  531  SYAANEERNEGEVDEA-----------HSRGKLEEVIQDYNLNFGTNFST---DTFQEYF  576

Query  596  NEISMRVRK----REVDILLVVNMFLTGFDSPLLSTLYVDKNLKHHGLIQAFSRTNRILD  651
            N+IS  V+K      +D+L+VVNMFLTGFDS +L+TLYVDKNLK H+LIQA+SRTNR+  
Sbjct  577  NHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEK  636

Query  652  DKKSHGNIVCFRNLKPATDAAITLFSNKEAIEDIILKPYKDYTARFNEVYKNLLAVVPTV  711
            + K+ G+IV +R+LK  TD A+ LFS+ E  + ++++ Y +Y A F +   +L AV    
Sbjct  637  ETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKP  696

Query  712  GSVDSLPSEVEQLEFIKHFRELIKIKNVLGTFA--DFKMEDLLIPEQDFEDYKSKYLDLH  769
              +D +  E E+  F+  FR + K+   L +F   DF   ++ + EQ+FEDYKSKY+ + 
Sbjct  697  QDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIY  756

Query  770  DQVKSS-TQKEKVSILEDVDFELELIHRDEINVAYILALLVKFKGATQSEQDKKRREITE  828
            D+VK+   + EKVSIL+D+DFE+E+++ D INV+YI+ L+ ++    ++EQ+++R +I  
Sbjct  757  DEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRR  816

Query  829  LLEG--QVQLRSKRKLIEKFIDENIPHITDSDQVENEFEEFWNLEREKALTELCETEHIN  886
            +L+   +  LR KR L+  FID+ IP++++ D++++ +  F N  RE  + ++ + + ++
Sbjct  817  MLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVD  876

Query  887  NDKLRNVVTEYLFA  900
            ++ L+++  EY ++
Sbjct  877  EQVLKDITGEYEYS  890

67) Cycma_3305 in NC_015914


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  657 bits (2484),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/887 (46%), Positives = 624/887 (71%), Gaps = 48/887 (5%)

Query  1    MTSQPEQIIENNLVTQLQRLGYKKVIICDENDLLSNLKSQL-----EKHNKIQLSDNDFK  55
            M  Q+E  +E +++ QL+  GY  V I +E++LL N++S L     +K N   L+D++F+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   QILNFINKGNVFERAKILRDRVPYTNAQGDTKTVELINQIHWCQNEFQVTQQVAMEGTHK  115
            ++L  IN   +FE A+ILRD++P    +     + +++  HWCQN FQ+T+QV++++T K
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  NRYDVTILINGLPLVQVELKRRGLELKEAFNQTNRYERHSYWAGHGLFQFVQVFVISNGV  175
             RYDVTILINGLPLVQ+ELKRRG++++EAFNQ  RY +++Y    GLF+++Q+F+ISNG+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFIISNGI  177

Query  176  NTKYYANAPLKARSFK-QTFYWADEKNRLITQLAAFSELFLEPCHISKMITKYVVLNESQ  234
            +T+Y +N    +  +K + FYW+D  N  I  L  F+E FL PCHI+KMI++Y++LNE++
Sbjct  178  DTRYISNN--DGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETD  235

Query  235  KILMVLRPYQFYAVEAIVERVKTTTKFGYIWHTTGSGKTLTSFKAAQILTNLPQVHKVVF  294
            +ILM +RPYQ  AVEA++++   T++ GYIWHTTGSGKTLTSFKA+Q+L++  ++ KV+F
Sbjct  236  NILMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIF  295

Query  295  VVDRKDLDNQTTKEFNSFSKGSIDGTNNTKTLVKQLTSDN-KLIVTTIQKLNTAISKTRY  353
            +VDRKDLD+QT  EFN FSKGS+D TNNT  LVKQL   +  LIVTTIQK++ AI +   
Sbjct  296  LVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNA-  354

Query  354  LNKMETLKNERIVFIFDECHRSQFGKTHEDIKKFFEDCQMFGFTGTPIFEPNAGKNEYGK  413
             + ++  K +++VFI+DECHRSQFG  H  +++ F++ Q FGFTGTP FE N +++    
Sbjct  355  -EALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDG---  410

Query  414  RTTKMLFGDCLHKYVITDAIRDENVLKFSVEYIQTFKKKDHILDIN--VEAIDEAEVMNA  471
            R+T  +FG CLH Y+I DAI+D NVL FSV+YI+T+K ++   + +  VE+I+  EV  +
Sbjct  411  RSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLS  470

Query  472  PIRLDNITEYIIANHNRKTHSREFTALFCVSSVPVLIEYYKLLLQKKEEGKHHLKLATIF  531
              R++ I+  I  NH++ T++R+++A+F V S+P L+ YY  + +   +  H LK+A +F
Sbjct  471  DQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVF  530

Query  532  SYSVNEDDKDAVGFVDDEEFLNPNALHVAASPHTRYFTQHTRDELEDFIIQYNKQFGTNF  591
            SY+ NE+ +++   VD+                      H+R+ LE+ I +YN +FGTNF
Sbjct  531  SYAANEERNEGE--VDEA---------------------HSRGKLEEVIQDYNLNFGTNF  567

Query  592  TSRDNQSYYNYYN-DIAKRVKHRQIDLLVVVNMFLTGFDSKHLNTLYVDKNLRYHGLIQA  650
            ++   Q Y+N  + ++ K VK+ +ID+L+VVNMFLTGFDSK LNTLYVDKNL+YH+LIQA
Sbjct  568  STDTFQEYFNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQA  627

Query  651  YSRTNRVLNEVKSQGNIVCFRNLKEATDEAITLFSNKNAKDEIIMQPYEEYVAKFNQAFD  710
            YSRTNRV +E K+ G+IV +R+LK+ TD+A+ LFS+ +  D ++M+ Y+EY A F +A+ 
Sbjct  628  YSRTNRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALA  687

Query  711  ALLQIAPTVDSVNDLANEEEELAFIQAFRELMRLKNVLTTFTEFEF--ADLTMNQQSFED  768
             L  +A   + ++++ +E+E  AF++AFR + +L   L +F EF+F  A++ MN+Q FED
Sbjct  688  ELKAVALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFED  747

Query  769  YKSKYLDLYDKAKS-HNQKEKVSILEDIDFELELIHRDEINVAYILKLLAKLKDATPEEQ  827
            YKSKY+ +YD  K+ + + EKVSIL+DIDFE+E+++ D INV+YI+ L+ ++      EQ
Sbjct  748  YKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQ  807

Query  828  EKQKKALIEIV--AGDAKLRSKRELIEKFIQENLPHISDSDDLPEEF  872
            ++++  +  ++  A+D+ LR KR+L+  FI++ +P++S+ D++ E +
Sbjct  808  QRNRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAY  854

68) ANA_C12919 in NC_019427


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  657 bits (2482),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 405/931 (44%), Positives = 656/931 (71%), Gaps = 50/931 (5%)

Query  3    QSELELEQNLIKRLTGLGYEPVNISNAEDLKANLKARL-----EKHNGITLSDTEFKSIL  57
            QSE+ LE +++ +L + GYE V I N ++L  N+++ L     +K NG  L+D EF+ +L
Sbjct  4    QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  58   NHLDKGNIFDRAKRLRDKMELSRDDGTTFYLEFLNTEHWCQNQYQVTNQITQQGNYKNRY  117
              ++   IF+ A+ LRDKM L RDD +  YL FL+T HWCQN++Q+TNQ++ ++ YK RY
Sbjct  64   TMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYKARY  123

Query  118  DVTLLINGLPLVQIELKRRGLELKEAFNQINRYQRHSYGAENGLFQYVQIFVISNGVNTR  177
            DVT+LINGLPLVQIELKRRG++++EAFNQ+ RY++++Y    GLF+Y+Q+F+ISNG++TR
Sbjct  124  DVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLFRYIQLFIISNGIDTR  180

Query  178  YYANNRKQEFK-QTFYWADQENNLITQLEDFADSFLEKCHVSKMICKYIVLHESDKVLMV  236
            Y +NN  + +K + FYW+D+ENN I  L++F+++FL  CH++KMI +Y++L+E+D++LM 
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  237  LRPYQYYAVEAIIERVKDTDKNGYIWHTTGSGKTLTSFKAAQILTQLPKVHKVLFVVDRA  296
            +RPYQ  AVEA+I++  +T +NGYIWHTTGSGKTLTSFKA+Q+L++   + KV+F+VDR 
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  297  DLDYQTSREFNDFSPDCVDTTDNTKQLVNQMAGDS-RLIVTTIQKLNTAIKKPRHEAAME  355
            DLD QT  EFN FS + VD T+NT QLV+Q+ + S  LIVTTIQK++ AI++  +  A++
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQN--NAEALD  358

Query  356  GLKDQRIVFIFDECHRSQFGETHKNIVKFFTKAQMFGFTGTPIFADNAASNQHGKRTTKD  415
              K +++VFI+DECHRSQFG+ H+ + + F +AQ FGFTGTP F +N +   ++ R+T D
Sbjct  359  QYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQS---QDGRSTAD  415

Query  416  LFQECLHKYVITNAIADENVLKFSVEYWGKIKRKD-----GTLITEPKLDREFFENPDRI  470
            +F  CLH Y+I +AI D NVL FSV+Y   IK ++     + L+   + D   + + +R+
Sbjct  416  IFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSD-QRV  474

Query  471  SLIVDWIIANHHRKTHGIKFSAMLCVSNVDTLITYYETFKNKQKQGLHDLRVITIFTPSD  530
             LI   I  NH++ T+  ++SA++ V ++ +L+ YY++FK+  K+  H L+V  +F+ + 
Sbjct  475  ELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAA  534

Query  531  NEEDEDANGLIGEPGFNISADTSNRSHSRDKLNQFIADYNQIYKTQHSAKDSQAFYAYYK  590
            NEE ++++               + +HSR+KL++ I DYN  + T+ S   +++F  Y++
Sbjct  535  NEERNEGE--------------VDEAHSRGKLEEVIQDYNLNFGTNFS---TDTFQEYFN  577

Query  591  DISKRMKDRDRENFQDQERADILLVVNMFLTGFDVKKLNTLYVDKNLKYHGLIQAYSRTN  650
            +ISK +K   ++N     + D+L+VVNMFLTGFD K LNTLYVDKNLKYH+LIQAYSRTN
Sbjct  578  HISKNVKKGVKDN-----KIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTN  632

Query  651  RILGELKSQGNIVCFRNLKDNTDQAVILFSDTNAKeeifiepyeyyieKFNQGVQELRAI  710
            R+  E K+ G+IV +R+LK+NTD+A+ LFS+T+  + +++  Y+ Y   F +++ EL+A+
Sbjct  633  RVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAV  692

Query  711  ATIPNDVNKLISEEEQVEFVKAFRNLIRLLNVSKSFTEFSFS--DLNLDEQTFEDYKSKY  768
            A  P+D++++  E+E+  FV AFR + +L+   K+F EF F+  ++ ++EQ FEDYKSKY
Sbjct  693  ALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKY  752

Query  769  LDIYDQTRPK-PDKEKESLVEEVDFELELIHRDEINVTYILELLGKLQRDNDATQEDYQN  827
            + IYD+ +PK  + EK S+++++DFE+E+++ D INV+YI++L+ +++  + A Q+  ++
Sbjct  753  FAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRD  812

Query  828  QKAYILEIIGKEAQLRSKRDLLEKFIEERMPSIEPEEKIETVFKDFWNQERIAAIQRLCT  887
            Q   +L+  + ++ LR KRDLL  FI++ +P +  E++I+  +  F N  R + ++++  
Sbjct  813  QIRRMLD-NADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQ  871

Query  888  EENLKIEAVNQMIADYKFSG---KEPLRETV  915
            ++ +  + ++++ ++Y +SG   ++ L+E V
Sbjct  872  QQAVDEQVLKDITGEYEYSGIVNQDHLKELV  902

69) Galf_1412 in NC_014394


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  657 bits (2485),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/965 (44%), Positives = 651/965 (68%), Gaps = 55/965 (5%)

Query  1    MSTQSEYALEAALIAQLKGMEYDSVTLDDETAMLANLKQQLQIHNKDI----QFTPTEFD  56
            M  QSE+ALE+ ++ QLK+  Y++VT+ +E  +L N++  L+ ++ D      +T  EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  57   RILNHLNTGSVFERAKILRDKFALKRDNDETAYISFLNCDDWCMNEFQVTNQVSMQGKRK  116
            R+L  +N  ++FE A+ILRDK +LKRD++   Y+SFL+  +WC N FQ+TNQVS+++  K
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  117  NRYDVTLIINGLPLVQIELKRRGAELKVAFHQINRYQHDSYDAGFGLFQYVQLFIISNGV  176
             RYDVT++INGLPLVQIELKRRG +++ AF+Q+ RY+ ++Y    GLF+Y+QLFIISNG+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLFRYIQLFIISNGI  177

Query  177  NTKYFSNNKQQSFK-QTFYWTDKENKRLSDLLEFSAEFLKPCHIAKMMTHYMVMTE-EQV  234
            +T+Y+SNN  + +K + FYW+DKEN+R++ L EF+  FL+PCHIAKM+++YM++ E +++
Sbjct  178  DTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNI  237

Query  235  IKVLRPYQFYATEALVDRVKNSNEFASRRHLSDAQSSHNAYIWHTTGSGKTLTSFKAAQI  294
            +  +RPYQ  A EAL+++               +++S+N+YIWHTTGSGKTLTSFKA+Q+
Sbjct  238  LMAMRPYQVHAVEALIHQA--------------TETSNNGYIWHTTGSGKTLTSFKASQV  283

Query  295  IQRMPKVHKVVFCVDRKDLDYQTAKEFNGFCKGSVDETTNTHTLVKQLNDDSTKLILTTI  354
            +     + KV+F VDRKDLD QT  EFN F KGSVD T NT  LVKQL+D S  LI+TTI
Sbjct  284  LSEQDDIKKVIFLVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTI  343

Query  355  QKLNNAIVKEHYLSRVTHLQDKKFVFIFDECHRSQFGDTHQNIKQFFRNAQMFGFTGTPI  414
            QK+++AI  ++    + + +  K VFI+DECHRSQFGD H+ ++Q F NAQ FGFTGTP 
Sbjct  344  QKMSKAI--QNNAEALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPR  401

Query  415  FADNATGSIGQQKTTKDLFGECLHKYVIVDAIKDENVLRFAVEYVGKYKRVDNANEIDID  474
            F +N +    + ++T D+FG CLH Y+I DAI D NVL F+V+Y+   K  +   E D  
Sbjct  402  FEENQSQ---DGRSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDEL  458

Query  475  VEAIDTKELLDSPIRLGKITDYILAYHPQKTKSPDFTAMFCVSSVETLIKYYDLFKQKQV  534
            VE+I+T E+  S  R+  I+  I   H + T++ +++A+F V S+ +L+KYYD FK+   
Sbjct  459  VEGINTDEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISK  518

Query  535  GAAKPLKIATIFSYAANEEDPNANGLTSGLIPEENPIPEGKINQRSRDKLDEFIEDYNGM  594
            +   PLK+A +FSYAANEE             +E  + E+    +SR+KL+E I+DYN  
Sbjct  519  DYEHPLKVAGVFSYAANEE------------RNEGEVDEA----HSRGKLEEVIQDYNLN  562

Query  595  FGTKYSTRDSQSYYNYY-QDIAKRVRAGQVDILLVVNMFLTGFDSPRLNTLYVDKNLKFH  653
            FGT++ST   Q Y+N   +++ K V+  ++D+L+VVNMFLTGFDS  LNTLYVDKNLK+H
Sbjct  563  FGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYH  622

Query  654  GLVQAFSRTNRILNDKKSQGNIICFRNLKEATDEAIALFSNKDAKETVLLEPYEDYVTQF  713
            +L+QA+SRTNR+ ++ K+ G+I+ +R+LK+ TD+A+ LFS+ +  + VL+  Y++Y ++F
Sbjct  623  DLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEF  682

Query  714  NEATEALLALTPTVASVDALPDEKAELEFVTKFRALLRLKNIITSFAE--FSETDLAMAE  771
             +A   L A++     +D + DE+    FV  FR + +L   + +F E  F+ ++++M E
Sbjct  683  VDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNE  742

Query  772  QLFEDFKSKYLDIHDKVK-KQTDPEKVSVLEEVDFELSLIHRDEINVAYIlnllvnlknl  830
            Q FED+KSKY+ I D VK K+ + EKVS+L+++DFE+ +++ D INV+YI++L+ ++   
Sbjct  743  QEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLK  802

Query  831  PPEEARKRQKAILDML--AGEVQLRSKRKLIEAFIEDNLPKLKPDDNVIAEFESYWMRQR  888
               E ++ +  I  ML  A++  LR KR L+  FI+D +P L  +DN+   +  +   +R
Sbjct  803  DKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKR  862

Query  889  QSAFVQLCRDEQIEPAQFEKLLQNYVFANRLPRDQ--EIVESLSFKPKILERKSI---LE  943
            +S F Q+ +++ ++   +  +  +Y ++  + +D+  E+V    ++ K   +K++   +E
Sbjct  863  ESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKELVGDKKLREKRQTKKAVTSFVE  922

Query  944  RIGDK  948
             +++K
Sbjct  923  EVSEK  927

70) MI1_06800 in NC_016805


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  657 bits (2485),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 418/955 (44%), Positives = 670/955 (71%), Gaps = 37/955 (3%)

Query  3    QTESKLENQLIAQLGKSSWQFRPELNHYSLIVNHFRVLLNRRNIDKLDGTLLTDQEFQRF  62
            Q+E  LE +++ QL  ++ +    + +   ++++FR +LN R+ DKL+G  LTD+EFQR+
Sbjct  4    QSEFALETEMMEQLKSNGYE-TVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRL  62

Query  63   LNEILGSKSIYQLGRYLRGDDQFQGGRAQIQRDDGSDITLSFFDPRDAENNIYEVAHQVV  122
            L  ++ +K+I++ +R LR+       +  ++RDD S++ LSF+D R+  +N +++++QV 
Sbjct  63   LT-MINGKGIFESARILRD-------KMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVS  114

Query  123  VNDKYENRYDVTLLINGLPLVQIELKRHSVEMSQAFQQILRYRRESFNVGGSLFRYLQIF  182
            V+D Y  RYDVT+LINGLPLVQIELKR+++++++AF+Q++RYR++++    +LFRY+Q+F
Sbjct  115  VDDTYKARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLFRYIQLF  171

Query  183  VISNGMSSRYFSNNDGELNKNFIFNWSDENNRWIDEIEPFTASFLSPLNIHEMISKYTIF  242
            +ISNG+ +RY+SNNDGE+ K+ +F WSD +N +I+ ++ FT +FL P +I  MIS+Y I+
Sbjct  172  IISNGIDTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMIL  231

Query  243  DADQKVMKIMRPYQVYAQKSIMSQAEIHPATNGYVWHTTGSGKTITAFKAASQLALHTDA  302
            +  ++++  MRPYQV A  +++ QA  + + NGY+WHTTGSGKT+T+FKA+  L+ + D 
Sbjct  232  NETDNILMAMRPYQVHAVEALIHQA-TETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDI  290

Query  303  QKIIFLVDRRDLDSQTINNFNAYLPKRADGQSSIDRTDNTSVLVEQLKNSTDTLIVTTIQ  362
            +K+IFLVDR+DLDSQT ++FN +      +++S+D+T+NT+ LV QLK+ +  LIVTTIQ
Sbjct  291  KKVIFLVDRKDLDSQTEEEFNKF------SKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQ  344

Query  363  KLANAVKNERYRSVLEPYKEQRVIFIEDEAHRTQFGEMRKQVNSWFKNAQHFGFTGTPIF  422
            K+++A++N+     L+ YK ++V+FI DE HR+QFG+M++ V   F+NAQ FGFTGTP F
Sbjct  345  KMSKAIQNNA--EALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRF  402

Query  423  KENIGADGRTTDDIYDTRLHTYLIKDAVRDHNVLPFNVTYINTIHSKEDIENLNGEVEAL  482
             EN + DGR+T DI++  LHTYLIKDA++D NVL F+V YINTI +++   + +  VE++
Sbjct  403  EENQSQDGRSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGI  462

Query  483  NIKEVYENEKRLNQIAQHIILNHSSKTYNRQYNAIFAVSDTRTALKYYDIFKEINND---  539
            N  EV  +++R++ IA+HI  NH   T NRQY+AIF+V    + +KYYD FK I++D   
Sbjct  463  NTDEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEH  522

Query  540  -LKVTTIFTWTANEDDNDEHQKDDTLTSRHGLEKVIDDYNDKYHQnfstdtfsdffndVS  598
             LKV+ +F+ +ANE+ N+ +  +    SR  LE VI+DYN ++  NFSTDTF ++FN++S
Sbjct  523  PLKVAGVFSYAANEERNEGEVDEA--HSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHIS  580

Query  599  KRMKNHDAKSPENNIDVLIVVNMFLTGFDAPTLNTLYVDKNLQYHGLIQAFSRTNRVQKA  658
            K +K+      +N+IDVLIVVNMFLTGFD+  LNTLYVDKNL+YH+LIQA+SRTNRV+K 
Sbjct  581  KNVKK---GVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKE  637

Query  659  PKDYGNIVAYRNIKSKTDEAVQLFSQGDKAA-FFAPSYENLKLDFQQAISALRDKVATPE  717
             K +G+IV YR++K +TD+A++LFSQ + +   +   Y++ K +F +A++ L+     P+
Sbjct  638  TKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQ  697

Query  718  DTNRLLDEGETAELEFIKLFRNVMSLQSRISVYEEFDWSEIETELDWTQQIFDDFKGKYA  777
            D +++ DE E     F+  FR V  L  R+  ++EFD +  +  ++  +Q F+D+K+KY 
Sbjct  698  DMDQVQDENEKK--AFVEAFRLVSKLVLRLKAFDEFDFTKANIGMN--EQEFEDYKSKYF  753

Query  778  TFYERHKAR--QKEKASIIDDVDFYPELLMVDAIDVDYINRLISQIDLSSPNARTEGVEK  835
            ++Y+  K++  + EK SI++D+DF  E+L  D I+V YI  L+ QIDL     +    ++
Sbjct  754  AIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQ  813

Query  836  VKKALTNNTEPTLFSKRELLEQFLDSVIPELNHDANITGELNHFLADKRQAEIYHFAEEH  895
            +++ L N  +PTL  KR+LL +F+D VIPEL+++ NI      F   KR++E+ +FA+++
Sbjct  814  IRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQ  873

Query  896  RLEPSQLAEQVAEYEVSQHENSKALSELTAGMTFKEKRTAKQSIKNFIIETAKKF  950
             ++   L +  +EYE S   N   L EL ++  ++EKR +K+++ +F+ E + K+
Sbjct  874  AVDEQVLKDITGEYEYSGIVNQDHLKELVGDKKLREKRQTKKAVTSFVEEVSEKY  928

71) ZPR_0882 in NC_014041


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  654 bits (2473),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 396/922 (43%), Positives = 644/922 (70%), Gaps = 40/922 (4%)

Query  1    MTTQPEQVLENDLLSQLDSLGHQPILIRTEKDLLDNLKSQL-----EKHNKTSFSKEEFN  55
            M  Q+E  LE +++ QL S G + + IR E++LLDN++S L     +K N  +++  EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   KILIHLSKGNIFDKAKTLRDKFVLQRDNGEKSYIQFINQDFWCQNEFQVTHQITVNGKRE  115
            ++L  ++   IF+ A+ LRDK  L+RD+    Y+ F++   WCQN FQ+T+Q++V++   
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  NRYDVTLLINGLPMVQIELKRRGIELKKAFSQIQRYQKDSFASNSALFQYIQVFVISNGV  175
             RYDVT+LINGLP+VQIELKRRGI+++ AF+Q+ RY+K+++   ++LF+YIQ+F+ISNG+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFIISNGI  177

Query  176  NTKYYANNPKNSFK-QTFFWSKESNTNITQLTHFANVFLEPCHIAKMITKYIVLHESDRL  234
            +T+Y +NN  + +K + F+WS   N  I  L +F++ FL PCHIAKMI++Y++L+E+D +
Sbjct  178  DTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNI  237

Query  235  LMILRPYQFYAVEAIIKRVKDTSKNGYIWHTTGSGKTLTSFKASQILTQNPKIKKVVFVV  294
            LM +RPYQ  AVEA+I +  +TS+NGYIWHTTGSGKTLTSFKASQ+L+++  IKKV+F+V
Sbjct  238  LMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLV  297

Query  295  DRQDLDDQTVKEFRAFDKDSIDGTENTKMLVNQFLDDSRPLMITTIQKLNTAISKARFKS  354
            DR+DLD QT  EF  F K+S+D T+NT  LV+Q+ D S PL++TTIQK++ AI +     
Sbjct  298  DRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNN--AE  355

Query  355  KIERLKDEKIVFIFDECHRSQFGETHKRITNFFTNHQLFGFTGTPIFVKNAHRDNSLKYT  414
             +++ K +K+VFI+DECHRSQFG+ H+ + + F N Q FGFTGTP F  N  +D     +
Sbjct  356  ALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGR---S  412

Query  415  TQMLFDECLHKYVITDAIRDENVLKFSIEYYNVFKQKE---EIEDLKVEGIDKKEVYESD  471
            T  +F+ CLH Y+I DAI+D NVL FS++Y N +K ++   E ++L VEGI+  EV  SD
Sbjct  413  TADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDEL-VEGINTDEVWLSD  471

Query  472  EYIETVTNYILANHNRKTHNKTFTAMFCVSSVDVLVKYYDLFQKKREEGQHNLRVATIFS  531
            + +E ++  I  NH++ T+N+ ++A+F V S+  LVKYYD F+K   + +H L+VA +FS
Sbjct  472  QRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFS  531

Query  532  FAPNEEDKNADGMIPNEDYSMAAEPEATYKLPHRDKLDQYIDNYNKLFGAKHSAKDGQAF  591
            +A+NEE ++++            E+++      R+KL++ I++YN  FG++ S+   Q +
Sbjct  532  YAANEERNEGE----------VDEAHS------RGKLEEVIQDYNLNFGTNFSTDTFQEY  575

Query  592  LNY-KKDISKRVRNRQIDILLVVNMFLTGFDSKTLNTLYVDKNLKYHGLIQAFSRTNRIL  650
            +N   K++ K V++ +ID+L+VVNMFLTGFDSK LNTLYVDKNLKYH+LIQA+SRTNR+ 
Sbjct  576  FNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVE  635

Query  651  NEKKSQGNILAFRNLKKATDEAIGLFSDKNAKETILVAPYEDYVREFNEAYKKLMQIAPT  710
            +E K+ G+I+ +R+LK+ TD+A+ LFS+ +  + +L+  Y++Y  EF +A   L  +A  
Sbjct  636  KETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALK  695

Query  711  VDSVndlndeeeellFAKAFREIMRIKNILGSFTDFSF--DDIYMKEQEFADYSSKYLDL  768
             + +++++DE+E   F  AFR + ++   L +F +F F   +I M+EQEF DY SKY+ +
Sbjct  696  PQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAI  755

Query  769  YDKIKSD-TQKENVSILDEIDFELELIHRDEVNVTYILKLL--AELKDAPEKDQKRKEKE  825
            YD +K+   + E+VSIL++IDFE+E+++ D +NV+YI+ L+   +LKD +E++++R +  
Sbjct  756  YDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIR  815

Query  826  IIDMVSSEAELRSKKELIQKFIYNNLPAIENDDNVEDEFSRFWQKETKSAMRDLTSNENL  885
             +   + ++ LR K++L++ FI + +P + ++DN+++ +  F +    S   +++ ++ +
Sbjct  816  RMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAV  875

Query  886  DQEKVERIISDFLFTGRMATED  907
            D++ +  I +++ ++G +  ++
Sbjct  876  DEQVLKDITGEYEYSGIVNQDH  897

72) A7H1H_0910 in NC_021878


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  647 bits (2446),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 407/918 (45%), Positives = 638/918 (70%), Gaps = 53/918 (5%)

Query  45   NKTTLSQTEFQRVLNHLNKGDIFEKATILRDKYALLKDDNKTTIYIEFLDSINWCQNIFQ  104
            N   L++ EFQR+L  +N  +IFE A ILRDK +L +DD+ + +Y+ FLD+ +WCQN FQ
Sbjct  50   NGDPLTDKEFQRLLTMINGKGIFESARILRDKMPLKRDDE-SEVYLSFLDTRHWCQNKFQ  108

Query  105  VTSQVTIEGKYKNRYDVTLLINGLPLIQIELKRRGLELKEAFNQINRYQRHSYSFNSALF  164
            +T+QV++++ YK RYDVT+LINGLPL+QIELKRRG++++EAFNQ+ RY++++Y+   +LF
Sbjct  109  ITNQVSVDDTYKARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLF  165

Query  165  SYIQIFVISNGVNTKYYSNNKKQSFK-QTFFWADEDNNNITDLSAFTKVFLEKCHISKMI  223
             YIQ+F+ISNG++T+Y SNN  + +K + F+W+D +NN I  L+ FT  FL  CHI+KMI
Sbjct  166  RYIQLFIISNGIDTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMI  225

Query  224  CRYIVLAQAKKILMVLRPYQFWAVEAIINRVKNTNKNGYIWHTTGSGKTLTSFKASQILT  283
             RY++L ++ +ILM +RPYQ  AVEA+I++  +T++NGYIWHTTGSGKTLTSFKASQ+L+
Sbjct  226  SRYMILNETDNILMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLS  285

Query  284  NLSEVEKVVFVVDRKDLDSQTTKEFNSFSSGSVDGTDNTKILVNQFLDKYKDKKGELRNS  343
            +  ++ KV+F+VDRKDLDSQT  EFN FS GSVD T+NT  LV+Q+ DK         + 
Sbjct  286  EQDDIKKVIFLVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDK---------SL  336

Query  344  KLIITTIQKLNGAISKKRYLDEMMTIKDKKIVFIFDECHRSQFGETHKNIVKFFTNAQLI  403
             LI+TTIQK++ AI ++   + +   K  K+VFI+DECHRSQFG+ H+ + + F NAQ +
Sbjct  337  PLIVTTIQKMSKAIQNNA--EALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYF  394

Query  404  GFTGTPIFEENALGNKFGKKTTAELFGEKLHKYIITNAIKDENVLKFCVEYVGRYKKKDS  463
            GFTGTP FEEN   +    ++TA++FG  LH Y+I +AI D NVL F V+Y+   K ++ 
Sbjct  395  GFTGTPRFEENQSQD---GRSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNI  451

Query  464  ANEIDIEVEGIDTKELLESDARIEKIVDYILVNHDRKTHSKEFNSMMCVSSVEVLCKYYE  523
              E D  VEGI+T E+  SD R+E I   I  NHD+ T++++++++  V S+  L KYY+
Sbjct  452  DTETDELVEGINTDEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYD  511

Query  524  SFKAKS----HNLKIATIFSYSTNEDDKDANGVYSIDESDFIVVESNINEHSRDKLEEYI  579
            +FK  S    H LK+A +FSY++NE+ ++++    +DE+           HSR+KLEE I
Sbjct  512  AFKKISKDYEHPLKVAGVFSYAANEERNEGE----VDEA-----------HSRGKLEEVI  556

Query  580  SDYNKLFDTNYTTKDTKSFYNYYDDISRRTKK----KEIDILLVVNMFLTGFDAPILNTL  635
             DYN  F+TN++   T +F +Y+++IS+  KK    + ID+L+VVNMFLTGFD+ +LNTL
Sbjct  557  QDYNLNFGTNFS---TDTFQEYFNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTL  613

Query  636  YVDKNLKYHGLIQAFSRTNRILNEKKSQGNIICFRNLKNNTDEAIALFSNQDNEDKVLME  695
            YVDKNLKYH+LIQA+SRTNR+ +E K+ G+I+ +R+LK+NTD+A+ LFS+ ++ D+VLM 
Sbjct  614  YVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMR  673

Query  696  PYEYYMEKCNEIFMKLLQIAPSVSSIDKIIDENIQLEFIKTFRELIRVKNILEGFADFKW  755
             Y+ Y     + +  L  +A     +D++ DEN +  F+ +FR + ++   L +F +F  
Sbjct  674  DYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDF  733

Query  756  F--DLSMSEQQFEDYKSKYLDLYDKIRSEKNAKDGKVSILKDVDFELELIHKDEINVSYI  813
               +++M+EQ+FEDYKSKY+ +YD +++ +   + KVSIL+D+DFE+E++++D INVSYI
Sbjct  734  TKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVE-KVSILNDIDFEIEILRNDRINVSYI  792

Query  814  LKLLAKYSKTKTKDKTVQKENINNLINS--NPKLRSKKELIEEFINTTLDGI-EIENIED  870
            + L+ +       ++  ++++I  ++++  +P LR K++L+ EFI+  +  + E +NI++
Sbjct  793  MDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDE  852

Query  871  EFFRFIDSKKDIAFNELCLEEKLDIGKTKELVENYLYDGRKPMSDDIVNILETKPKLLER  930
             ++ F ++K++  FN++  ++ +D    K++  +Y Y G   +++D ++ L    KL E+
Sbjct  853  AYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSG--IVNQDHLKELVGDKKLREK  910

Query  931  KIVIPKVLNKIVEFVEKF  948
            +     V + + E  EK+
Sbjct  911  RQTKKAVTSFVEEVSEKY  928

73) Dfer_5242 in NC_013037


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  642 bits (2428),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 405/928 (44%), Positives = 649/928 (70%), Gaps = 69/928 (7%)

Query  4    QPEQILEEQLVDQLQKLGYAFVAIKDEKQLISNLKSQL-----EKHNSIVFSDKEFDKVL  58
            Q+E  LE ++++QL+  GY  V+I++E+QL+ N++S L     +K N+  ++DKEF+++L
Sbjct  4    QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  59   NILNKGSVFEKAKTLREKQHIVRDNGESLYFEFLNQEHWCQNQFQVTQQVSMEGVYKNRY  118
             ++N  ++FE A+ LR+K  + RD+   +Y+ FL+  HWCQN+FQ+T+QVS+++ YK RY
Sbjct  64   TMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYKARY  123

Query  119  DVTLLINGLPLVQIELKRRGLELKEAFNQINRYQRHSFGVNSALFQYVQIFVISNGVNTK  178
            DVT+LINGLPLVQIELKRRG++++EAFNQ+ RY+++++   ++LF+Y+Q+F+ISNG++T+
Sbjct  124  DVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFIISNGIDTR  180

Query  179  YYANNKNQTFK-QTFYWSDVANKRLTNILNGFTSQFLEPCHISKMICKYIVVSETNKVLM  237
            Y +NN  + +K + FYWSD  N+R+ N LN FT  FL PCHI+KMI +Y++++ET+++LM
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRI-NTLNEFTETFLRPCHIAKMISRYMILNETDNILM  239

Query  238  VLRPYQFYAVEALVERVKNSGIKGPHKNGYIWHTTGSGKTLTSFKASQILMHLPQvkkvv  297
             +RPYQ  AVEAL+++  +++     +NGYIWHTTGSGKTLTSFKASQ+L +  ++KKV+
Sbjct  240  AMRPYQVHAVEALIHQATETS-----NNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVI  294

Query  298  fvvdrkdldYQTNKEFNIFSKGSVDGTDDTRALVKQFADDT-KLIVTTIQKLNSAIGKKQ  356
            F+VDRKDLD QT+ EFN FSKGSVD T++T  LVKQ+ D +  LIVTTIQK++ AI ++ 
Sbjct  295  FLVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNA  354

Query  357  YLDQMARMKDERIIFIFDECHRSQFGETHTRIKSFFNNIQLFGFTGTPIFADNAVKNELG  416
              + + + K ++++FI+DECHRSQFG+ H  ++  FNN Q FGFTGTP F +N  ++   
Sbjct  355  --EALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDG--  410

Query  417  KRTTTELFGECLHKYVITDAIRDENVLKFSVEYVGRYKQKDESRTNIDIEVEDIDTKELM  476
             R+T+++FG CLH Y+I DAI+D NVL FSV+Y+   K ++      ++ VE+I+T E+ 
Sbjct  411  -RSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDEL-VEGINTDEVW  468

Query  477  DSPVRLEKIADYILANHARKTHSREFTGMFCVSSVETLIRYYEILQAKKLAGQHNLKIAT  536
             S  R+E IA  I  NH + T++R+++++F V S+ +L++YY+ ++      +H LK+A 
Sbjct  469  LSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAG  528

Query  537  IFSYTANEDDQDANGSMSYESDPPPLRMVADPPAPYLKKGEEAAPTAPVIINKHSREKLD  596
            +FSY+ANE+ ++++                                   + + HSR KL+
Sbjct  529  VFSYAANEERNEGE-----------------------------------VDEAHSRGKLE  553

Query  597  EYIGHYNKMFGTAYSTKDSVSFYNYYNDVSKK----VKEKQIDILLVVNMFLTGFDSKKL  652
            E I +YN  FGT +ST    +F +Y+N++SK+    VK+++ID+L+VVNMFLTGFDSK L
Sbjct  554  EVIQDYNLNFGTNFSTD---TFQEYFNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVL  610

Query  653  NTLYVDKNLKYHGLIQAYSRTNRIDNDVKSQGNIIVFRNLKKATDEAIALFSNKDAKDII  712
            NTLYVDKNLKYH+LIQAYSRTNR++++ K+ G+I+ +R+LK+ TD+A+ LFS+ +  D +
Sbjct  611  NTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRV  670

Query  713  IMEPYEDYAEKFGAAFDKLLTVAPTVESVNQLTTEYDELEFIKAFRELMRIKNVLTTFAD  772
            +M  Y++Y   F  A+  L +VA   + ++Q+  E +   F+ AFR + ++   L +F +
Sbjct  671  LMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDE  730

Query  773  FKW--EDLAMSEQLFEDYKSKYLDLHDKVKFD-TQKEKVSILEDVDFELELIHRDEINVA  829
            F     +++M+EQ FEDYKSKY+ + D VK    + EKVSIL+D+DFE+E+++ D INV+
Sbjct  731  FDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVS  790

Query  830  YILKLLANLNNGSKADQEKKRKEIIDLL--TGEANLRSKRELIEKFIAENLPRIEDNETL  887
            YI+ L+ +++   KA+Q+++R +I  +L  ++++ LR KR+L+  FI + +P + +++ +
Sbjct  791  YIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNI  850

Query  888  PDEFEKFWNEEQVKAFKQLVEEEKLSEP  915
             + +  F N  +   F+Q+ +++ + E 
Sbjct  851  DEAYILFENAKRESEFNQFAQQQAVDEQ  878

74) Oscil6304_2205 in NC_019693


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  642 bits (2427),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 404/933 (44%), Positives = 649/933 (70%), Gaps = 51/933 (5%)

Query  3    QSEAQLEQDLIERLAGLGYEPVTIRNAVELTANLKTQL-----EKHNDITLSDQEFKSIL  57
            QSE  LE +++E+L + GYE VTIRN  +L  N+++ L     +K N+  L+D+EF+ +L
Sbjct  4    QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  58   NHLDKGNVFDRAKRLRDKMELSRDDGTTFYLEFISTEHWCEnqyqvtnqvtnqGSYKNRY  117
              ++   +F+ A+ LRDKM L RDD +  YL F+ T HWC+N++Q+TNQV+ +++YK RY
Sbjct  64   TMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYKARY  123

Query  118  DVTLLINGLPLVQIELKRRGLELKEAFNQINRYQRHSYGADNGLFQYVQIFVISNGVNTR  177
            DVT+LINGLPLVQIELKRRG++++EAFNQ+ RY++++Y    GLF+Y+Q+F+ISNG++TR
Sbjct  124  DVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLFRYIQLFIISNGIDTR  180

Query  178  YYANNRKQEYK-QTFYWADEGNNLLTNLDDFADRFLEKCHLSKMICKYIVLHESNKVLMV  236
            Y +NN  + YK + FYW+D  NN +  L++F++ FL  CH++KMI +Y++L+E++++LM 
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  237  LRPYQYYAVETIIERVKNTDKNGYIWHTTGSGKTLTSFKAAQILTKLPTVHKVLFVVDRA  296
            +RPYQ  AVE++I++  +T +NGYIWHTTGSGKTLTSFKA+Q+L+    + KV+F+VDR 
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  297  DLDYQTSREFNYFSPDCVDTTDNTQQLVKQMSGDS-PLIVTTIQKLNRAITSSRHEADMA  355
            DLD QT  EFN FS + VD T+NT QLVKQ+ + S PLIVTTIQK+++AI +  +   + 
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQN--NAEALD  358

Query  356  PLQNQRIIFIFDECHRSQFGETHRKITRFFHNAQLFGFTGTPIFAEKNVYVKDGLKLSTA  415
              + ++++FI+DECHRSQFG+ HR + + F+NAQ FGFTGTP F E++   +DG   STA
Sbjct  359  QYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQ--SQDG--RSTA  414

Query  416  SLFTECLHRYVITNAIADENVLKFSVEYWGKLKRK----DGTIIPEPKGDREFFENPDRI  471
             +F  CLH Y+I +AI D NVL FSV+Y   +K +    +   + E     E   + +R+
Sbjct  415  DIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRV  474

Query  472  SLIVDWIIENHHRKTHRKKFSAMFCVSSVNTLITYYETFKAKKQQGLHDLRVVTIFTPID  531
             LI   I ENH++ T+ +++SA+F V S+ +L+ YY++FK   ++  H L+V  +F+   
Sbjct  475  ELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAA  534

Query  532  NEDDDEANGLIGEPDFDITTDTSRRHHSRDKLDEFISDYNQMYKTQHSAKNSQAFYAYYK  591
            NE+ +E++  ++E+            HSR+KL+E I DYN  + T+ S   +++F  Y++
Sbjct  535  NEERNEGE--VDEA------------HSRGKLEEVIQDYNLNFGTNFS---TDTFQEYFN  577

Query  592  DISKRMKDRDREDAQDVDRADILLVVNMFLTGFDVKKINTLYLDKNLKYHGLIQAYSRTN  651
            +ISK +K   ++     ++ D+L+VVNMFLTGFD K +NTLY+DKNLKYH+LIQAYSRTN
Sbjct  578  HISKNVKKGVKD-----NKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTN  632

Query  652  RILGELKSQGNIVCFRNLKENTDDAVLLFSDENAKEEIFIQPYEYHVEQFNEEVQALRAI  711
            R+  E K+ G+IV +R+LK+NTD+A+ LFS+ +  + ++++ Y+    +F + +  L+A+
Sbjct  633  RVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAV  692

Query  712  ASIPNDVNQLIDEEDQVEFVKAFRNLIRFLNVSKSFTEFSFS--DLNLDEQTFEDYKSKY  769
            A  P+D++Q+ DE+++  FV AFR + +++   K+F EF F+  ++ ++EQ FEDYKSKY
Sbjct  693  ALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKY  752

Query  770  LDIYDRTRSKPDE-EKESLVEEVDFELELIQRDEINVSYILKLLGRLQRDRQTDVTSEEY  828
            + IYD  ++K +E EK S+++++DFE+E+++ D INVSYI+ L+ +++   +++   +  
Sbjct  753  FAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRN--  810

Query  829  QSQKASILELIGKEAQLRSKRDLLEKFIEERLPTLDPKEKIESVFQHFWTQERIAAIEQF  888
            + Q   +L+  + ++ LR KRDLL  FI++ +P L   ++I+  +  F    R + ++QF
Sbjct  811  RDQIRRMLD-NADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQF  869

Query  889  CQAENLKIEVVNRMIADYQFSG---KEPLRETV  918
             Q + +  +V++ + ++Y++SG   ++ L+E V
Sbjct  870  AQQQAVDEQVLKDITGEYEYSGIVNQDHLKELV  902

75) Pcar_0897 in NC_007498


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  642 bits (2428),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 391/932 (42%), Positives = 640/932 (69%), Gaps = 44/932 (4%)

Query  131   QSEAQLEENLIKRLQGLGWERVSINNADALRTNLKRQLEIHNEKELKGQTLSEAEFTRVL  190
             QSE  LE +++ +L++ G E V+I N + L  N++  L+ ++   L+G+ L++ EF R+L
Sbjct  4     QSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLL  63

Query  191   SHLDKGNVFQRAKTLRDRFLLHRDDGSTCYLQFLNVEHWCRNQYQVTRQVSQNGRYLNRY  250
             + ++   +F+ A+ LRD+  L RDD S  YL FL+  HWC+N++Q+T QVS ++ Y  RY
Sbjct  64    TMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYKARY  123

Query  251   DVTLLINGLPLAQIELKRRGIELKEAFNQINRYQRHSFWAENGLFNYVQLFVISNGKNTK  310
             DVT+LINGLPL QIELKRRGI+++EAFNQ+ RY+++++    GLF Y+QLF+ISNG +T+
Sbjct  124   DVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFIISNGIDTR  180

Query  311   YYANNRKQEFK-QTFYWARENNQPVTQLDQFADLFLEKCHLSKMICKYIVLHESHKLLMV  369
             Y +NN  + +K + FYW+  +N+ +  L++F++ FL  CH++KMI +Y++L+E++++LM 
Sbjct  181   YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  370   LRPYQYYAVEAIVERVKNGRKNGYIWHTTGSGKTLTSFKAAQILTHLPKVYKVVFVVDRA  429
             +RPYQ  AVEA++++  +  +NGYIWHTTGSGKTLTSFKA+Q+L++   + KV+F+VDR 
Sbjct  241   MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  430   DLDYQTTEEFNFFSPGSVDGTDNTRTLVKQMAGDN-SLIVTTIQKLNTAIKKPRHEKAME  488
             DLD QT EEFN FS GSVD T+NT  LVKQ+ + + +LIVTTIQK++ AI++  +  A++
Sbjct  301   DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQN--NAEALD  358

Query  489   ALRDKRVVFIFDECHRSQFGDTHKNIVNYFTKAQLFGFTGTPIFAENATFNKHGKRTTKS  548
               +  +VVFI+DECHRSQFGD H+ + + F +AQ FGFTGTP F EN +   ++ R+T  
Sbjct  359   QYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQS---QDGRSTAD  415

Query  549   LFEKCLHKYVITDAIRDENVLKFSVEYWGKLKRRD-GTLIDEQVASIDKKAFFENEARLT  607
             +F +CLH Y+I DAI+D NVL FSV+Y   +K ++ +T  DE V +I+      ++ R+ 
Sbjct  416   IFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVE  475

Query  608   GVVDWIIAHHNRKTHNRRFSAIMCAGNVATLTRYYDIFKRKKQAGEHDLRVVSVFTFDPN  667
              +   I  +H++ T+NR++SAI    ++++L +YYD FK+  +  EH L+V +VF++ +N
Sbjct  476   LIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAAN  535

Query  668   EEDQDANGLIGEPDFDIRVDAPESRHSREKLEEYVADYNALYRTQHSVRDSKAFYTYYKD  727
             EE ++++               +  HSR KLEE + DYN  + T+ S   + +F  Y+++
Sbjct  536   EERNEGE--------------VDEAHSRGKLEEVIQDYNLNFGTNFS---TDTFQEYFNH  578

Query  728   IAkrfkerekesfkdkdrADILLVVNMFLTGFDAKKINTLYVDKNLKYHGLIQAYSRTNR  787
             I+     ++       ++ D+L+VVNMFLTGFD+K +NTLYVDKNLKYH+LIQAYSRTNR
Sbjct  579   IS-----KNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNR  633

Query  788   ILGELKSQGNIVCFRNLKENTDEAIRLFCDTEASEDVLMEPYEVYMERFNQGVRHLLEIA  847
             +  E K+ G+IV +R+LK+NTD+A++LF +TE ++ VLM  Y+ Y   F +++ +L  +A
Sbjct  634   VEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVA  693

Query  848   ATPDAVNGLFTEEEQLAYVKAFRQLIVTLNKLKPFNDFSWS--DLELTEQRFEDYKSKYL  905
               P+ ++ +  E+E+ A+V AFR +   + +LK+F++F  +  ++ + EQ FEDYKSKY+
Sbjct  694   LKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYF  753

Query  906   DIYDRTHAWQ---EGASIIEEIDFQLELIRRDEVNVGYIVKLLSDIQYRKQQTGSAQPGA  962
              IYD   + +   E  SI+++IDF++E++R D +NV+YI+ L+ +I+ +  + +  Q   
Sbjct  754   AIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLK--DKAEQQRNR  811

Query  963   DSVRTVLEMLGREAQLRSKRELIERFIAEYMPQLTADQDLEEMFTGYWNREKRVAVNDLC  1022
             D +R +L+  + ++ LR KR+L+  FI + +P+L+ +++++E +  + N  +    N++ 
Sbjct  812   DQIRRMLDN-ADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFA  870

Query  1023  RRERLDKEAVYRMMDEYHFSG---KDPLRETV  1051
             +++ +D + +  + +EY++SG   +D L+E V
Sbjct  871   QQQAVDEQVLKDITGEYEYSGIVNQDHLKELV  902

76) EUS_10110 in NC_021011


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  627 bits (2369),  Expect = 1e-180, Method: Compositional matrix adjust.
 Identities = 407/982 (42%), Positives = 671/982 (69%), Gaps = 65/982 (6%)

Query  4    SEYEVENLFIERLGTIGYQFIQLRDYAEVKKNFKDQLQKFNKAAIIESKGNSELSDSEFD  63
            SE+ +E   +E+L + GY+ + +R+  ++  NF+  L+  +   +        L+D EF+
Sbjct  5    SEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKL----NGDPLTDKEFQ  60

Query  64   RLLTQIENKTVFDSAKILRDKQLLELDNGKTVYIEFL-SKDTERNIYQVTHQVTMDKEHQ  122
            RLLT I+ K +F+SA+ILRDK  L  D+   VY+ FL +++  +N +Q+T+QV++D    
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDD---  117

Query  123  GDVVYKNRYDVTVLINGLPLVQIELKRPGVEINEAINQINRYRRYSFRGLFRFIQCFVVS  182
                YK RYDVT+LINGLPLVQIELKR G++INEA+NQ+ RYR+ ++ GLFR+IQ F++S
Sbjct  118  ---TYKARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIIS  174

Query  183  NSIQTKYFANENETNADGTYKAILKSLAFFWTDATNERINQLNdftddfftKFNITALLT  242
            N+I+T+Y++N++    +  YK+ +    F+W+D  N+RIN LN+FT+ F+   +I+ +++
Sbjct  175  NGIDTRYISNND----GEIYKSHM----FYWSDKENNRINTLNEFTETFLRPCHIAKMIS  226

Query  243  DYTVLQDTLKNIIIMRPYQIYATKAVLRRVLEENRNGYVWHTTGSGKTLTSFKCASLLRD  302
             Y +L++T + ++ MRPYQ+ A  A++++  E + NGY+WHTTGSGKTLTSFK + +L +
Sbjct  227  RYMILNETDNILMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSE  286

Query  303  NGRIDKVFFLVDRKDLDDQTVDEYNSFEENCVDNTDSTAELIKRLKNSGEKMLVTTIQKL  362
            ++ I KV+FLVDRKDLD QT +E+N F    VD+T++TA+L+K+LK+ +  ++VTTIQK+
Sbjct  287  QDDIKKVIFLVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKM  346

Query  363  ACALRNDRYKPIMEAYKTKKCVFVIDECHRSQFGKMHGDIRRNFQNANFIGFTGTPIFEE  422
            + A++N+     ++ YKT K VF+IDECHRSQFG MH  +R++F+NA+++GFTGTP FEE
Sbjct  347  SKAIQNN--AEALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEE  404

Query  423  NKGAAGQTTADIFNAGTMDSCLHKYLIKEAIADGNVLKFSVEYQNTFNVVTTNAADMTVQ  482
            N++  G++TADIF       CLH YLIK+AI DGNVL FSV+Y   +N + ++  D   +
Sbjct  405  NQSQDGRSTADIFG-----RCLHTYLIKDAIHDGNVLGFSVDY---INTIKAQNIDTETD  456

Query  483  RIVHEQSNNPNFNLEEYCKRNNIDISNIYSDQQRIELVTNNILEHYEKHTKIGTDTYTSL  542
             +V                 + I+  ++   +QR+EL++ +I E+ +K T+     Y+++
Sbjct  457  ELV-----------------EGINTDEVWLSDQRVELIARHITENHDKYTR--NRQYSAI  497

Query  543  FAIQSVPLLQKYYSAFKKLNK---KGLKIAAIFTYAANEDMDDGA-DTPQSREFLEQCID  598
            F++QS+P L KYY AFKK++K     LK+A++F+YAANE+ ++G  D ++SR  LE+ I+
Sbjct  498  FTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNEGEVDEAHSRGKLEEVIQ  557

Query  599  DYNKMFSTDKEKLAFGLDTFDAYRKDIAKRLKQKEV--PQIDILLVVNMFLTGFDSKPLN  656
            DYN  F+T+     F+ DTF+ Y ++I+K +K K V   +ID+L+VVNMFLTGFDSK LN
Sbjct  558  DYNLNFGTN-----FSTDTFQEYFNHISKNVK-KGVKDNKIDVLIVVNMFLTGFDSKVLN  611

Query  657  TLYLDKPLFWHSLVQAYSRTNRIYKETKQYGQIITFRNIKEEQDKALKLFSGDGNPNAYL  716
            TLY+DK L  H L+QAYSRTNR+ KETK +G+I+ +R++K++ D+ALKLFS   + +  L
Sbjct  612  TLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVL  671

Query  717  FENYDYYVAEYSDRVSILRSVAPSFDIAGRLQSEDDQRKFIVSFRLVAQTLSTLKTFSKF  776
              +YD Y AE+ D ++ L++VA   +  +++Q E++++ F+ +FRLV++ +  LK+F  F
Sbjct  672  MRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEF  731

Query  777  DWNDLANVLDEDEFLGYKSWYLYYYDLAKKEREKNVKTT-LVDIDFNIELIRTDKINVVY  835
            D       ++E+EF +YKS Y+  YD  K  R    K + L DIDF+IE++R D+INV Y
Sbjct  732  DFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSY  791

Query  836  ILNLLKDVIKKDETEKKRSIDLILREIERSDNERLRAKQDMLKRFVTEKFFSLSPDEDIV  895
            I++L++++  KD +E++R+ D I R ++ +D+  LR K+D+L+ F+ + +  LS +++I 
Sbjct  792  IMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNID  851

Query  896  KAYEEFEVQQQNMDIEMFAEDTGIDIDTIKFFMSEYQFKHIISLEDIRKRLSQKGYGVLK  955
             AY  FE  +++ +++ FA++ ++D + +K + +EY++  I++ ++++  +++K    L+
Sbjct  852  EAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKELVGDKK---LR  908

Query  956  TLKLS-SEIEGFVKDQYEKFRA  976
              + +   + +FV +  EK+ +
Sbjct  909  EKRQTKKAVTSFVEEVSEKYSS  930

77) Echvi_4436 in NC_019904


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  626 bits (2366),  Expect = 2e-180, Method: Compositional matrix adjust.
 Identities = 404/962 (42%), Positives = 656/962 (69%), Gaps = 65/962 (6%)

Query  1    MTTQPEQVLENNLIKQLQQLGYQKVMIPDEAALLSNLKAQL-----EKHNKTQLSEQEFT  55
            M  Q+E  LE +++ QL+  GY+ V I +E  LL N+++ L     +K N   L+++EF 
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   QILNYINKGSIYDRAKILRDRVPYVNAQNETKTIELINQVHWCQNEFQVAQQISIEGKYK  115
            ++L  IN  +I++ A+ILRD++P    ++    + +++  HWCQN FQ+++Q+S+++ YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  NRYDVTILINGLPLVQVELKRRGLELKEAFKQIERYGIHSYGTGQGLfqfiqffiiSNGV  175
             RYDVTILINGLPLVQ+ELKRRG++++EAF+Q+ RY  ++Y    GLF++IQ+FIISNG+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLFRYIQLFIISNGI  177

Query  176  NTKYYANTPIKDRQFK-QTFYWADTHNKLITQLSAFADVFMEPCHLSKMITKYVVLNESN  234
            +T+Y +N    +  +K + FYW+D +N+ I  L+ F++ F+ PCH++KMI++Y++LNE++
Sbjct  178  DTRYISNN--DGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETD  235

Query  235  KSLMVLRPYQFYATEAIIDRVKTTTKYGYIWHTTGSGKTLTSFKTSQILTNLPQVHKVVF  294
            + LM +RPYQ  A EA+I++   T++ GYIWHTTGSGKTLTSFK+SQ+L++  ++ KV+F
Sbjct  236  NILMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIF  295

Query  295  VVDRKDLDYQTTKEFNSFSKGSIDGTNDTGTLVKQLAGDN-KLIVTTIQKLNTAVTKKRF  353
            +VDRKDLD QT  EFN FSKGS+D TN+T+ LVKQL + +  LIVTTIQK++ A+ ++  
Sbjct  296  LVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNA-  354

Query  354  FHKLETLQDKRIVFIFDECHRSQFGKTHESIKSFFVNGQMFGFTGTPIFEENAGTNEYGK  413
             + L+  +  ++VFI+DECHRSQFG  H  ++  F N+Q FGFTGTP FEEN + +    
Sbjct  355  -EALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDG---  410

Query  414  RTTTMLFQDCLHKYVITDAIRDENVLKFSIEYIQTFKRKDQVQDIN--VEAIDEAEVMEA  471
            R+T+ +F  CLH Y+I DAI+D NVL FS++YI+T+K ++   + +  VE+I+  EV  +
Sbjct  411  RSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLS  470

Query  472  SPRLNNIVDYIITHHKRKTHNQRFTAIFCVPSVEVLIRYYVLFKKKAVEEQHDYKIATIF  531
              R++ I   I  +H + T+N++++AIF V S+  L++YY  FKK + + +H  K+A +F
Sbjct  471  DQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVF  530

Query  532  SYGANDELLGKDEQDNTNHFNISSRVSIAAEDAGPYGQATIKHPREFLDDFISDYNQTFG  591
            SY+AN+E   ++E                       G+    H+R  L++ I DYN  FG
Sbjct  531  SYAANEE---RNE-----------------------GEVDEAHSRGKLEEVIQDYNLNFG  564

Query  592  SNYSTKDSQTFYNYYQNIAKR----VKNQEIDILLVVNMFLTGFDSKHLNTLYVDKNLQY  647
            +N+ST   +TF +Y+++I+K     VK++ ID+L+VVNMFLTGFDSK LNTLYVDKNL+Y
Sbjct  565  TNFST---DTFQEYFNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKY  621

Query  648  HGLIQAYSRTNRILDERKSQGNIVCFRNLKKNTDKAIKLFSNIEAKDEIIIAPYEEYVRK  707
            H+LIQAYSRTNR+  E K+ G+IV +R+LK+NTD+A+KLFS+ E  D +++  Y+EY   
Sbjct  622  HDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAE  681

Query  708  FNELFIDMLKIAPTINSVNSLKTEEDELAFIKAFRELMRVRNVLKTFTEFE--HDDLSMT  765
            F + + ++  +A   + ++ ++ E++  AF+ AFR + ++   LK+F EF+    +++M 
Sbjct  682  FVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMN  741

Query  766  DQGFEDYKSKYLDLYDKTRS-QNQKEKVSILDDIDFELELIHRDEVNVAYIVKLLGQ--L  822
            +Q FEDYKSKY+ +YD  ++ + + EKVSIL+DIDFE+E+++ D +NV+YI+ L+ Q  L
Sbjct  742  EQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDL  801

Query  823  KDAKPEEREKQQKAIVDMVSGDTQLRSKLKLIEKFINENLPKVQDSDDVSDEFDAFWTKE  882
            KD   ++R+++Q   +   ++D  LR K  L+  FI++ +P + + D++ + +  F    
Sbjct  802  KDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAK  861

Query  883  KMQAIEDLSKEEHLDMEKLQGVIGNYMFT---EKRPLRDDVIGMMKKRPGLRERRTVAER  939
            +   ++++++++ +D + L+++ G+Y ++   ++  L+ +++G  K    LRE+R     
Sbjct  862  RESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLK-ELVGDKK----LREKRQTKKA  916

Query  940  VT  941
            VT
Sbjct  917  VT  918

78) hsdR in NC_016940


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  625 bits (2362),  Expect = 4e-180, Method: Compositional matrix adjust.
 Identities = 397/939 (43%), Positives = 645/939 (69%), Gaps = 40/939 (4%)

Query  1    MTTQTEQILENELVEQLIGLGYEYLPIKEESDLVANFK-----RQLERLNGISLSETEMQ  55
            M  Q+E  LE E++EQL + GYE + I++E +L+ NF+     R+ ++LNG +L++ E Q
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   RLLLQLNQGSIFERSKRLRAKKLELQKDDQETIYLSLWDQKNWAENKFQLIRQMRMDGRY  115
            RLL  +N  +IFE ++ LR K + L++DD+  +YLS+ D ++W +NKFQ+  Q+ +D+ Y
Sbjct  61   RLLTMINGKGIFESARILRDK-MPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTY  119

Query  116  KNIYDLNILINGLPLLHIELKRRGIEMKEAFNQIHRYSHQSFLMGQALFSYTQLFVISNG  175
            K  YD+ ILINGLPL++IELKRRGI+++EAFNQ+ RY  Q++    +LF Y QLF+ISNG
Sbjct  120  KARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFIISNG  176

Query  176  VNTKYFANNKTGELNFKQTFYWANKENQKISRLEEFAQHFLAPPQLFKMISRYMVLSEAN  235
            ++T+Y++NN  GE+   + FYW++KEN++I+ L+EF++ FL P ++ KMISRYM+L+E++
Sbjct  177  IDTRYISNN-DGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETD  235

Query  236  KRILVMRPYQCHATEAIVNRVKNNGGNGYIWHTTGSGKTLTSFKSSQLLQELPkvkkvvf  295
            + ++ MRPYQ HA EA++++  + + NGYIWHTTGSGKTLTSFK+SQ+L E   +KKV+F
Sbjct  236  NILMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIF  295

Query  296  vvDRKDLDYQTIKEFDSFSKDCVSATENSKQLIQRFLGRD-KLIVTTIQKLNSVIHKKNK  354
            +VDRKDLD QT  EF+ FSK+ V  T+N+ QL++++ ++   LIVTTIQK++  I+++  
Sbjct  296  LVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNA-  354

Query  355  REQLLPLQEEEMVFIFDECHRSQFGESHRRIKDFFKKVQLFGFTGTP-IQAKNAMDTKWG  413
             E L   + + +VFI+DECHRSQFG+ HR +++ F++ Q FGFTGTP ++ +++ D +  
Sbjct  355  -EALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGR--  411

Query  414  KQSTKNLFDECLHRYIITDAIRDENVLRFLVEYVGRYKKTATANEIDIEVEDIDRQELLE  473
              ST ++F+ CLH Y+I DAI+D NVL F V+Y+   K      E D  VE+I+ +E+  
Sbjct  412  --STADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWL  469

Query  474  HEYRLEKIVDYIIKYHPIKTKNKKYNAIFCLPSIPVLNKYYEIFKRKKAEGAHDLNIACI  533
             + R+E I   I   H   T+N++Y+AIF + SIP L KYY+ FK+   +  H L++A +
Sbjct  470  SDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGV  529

Query  534  FSYGSNESPEGQDETQDGYTYRGHSRDRLEEAMMDYNASFNANYNSQSSQSFDNYYKDIA  593
            FSY++NE  +  +  +      +HSR++LEE + DYN +F +N+   S+++F++Y+++I+
Sbjct  530  FSYAANEERNEGEVDE------AHSRGKLEEVIQDYNLNFGTNF---STDTFQEYFNHIS  580

Query  594  KRLRDG----QIDILLVVNMFLTGFDSPRLNTLYVDKNLRYHGLIQAFSRTNRLMGSEKS  649
            K ++ G    +ID+L+VVNMFLTGFDS  LNTLYVDKNL+YH+LIQA+SRTNR+    K+
Sbjct  581  KNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKP  640

Query  650  QGNIVCFRNLKQATDDALLLYSDKDAPELAYSPSYEEQREKFDEKVMALKKLVPTVDSVD  709
             G+IV +R+LKQ TD+AL L+S+ +  +      Y+E +  F + +  LK +    + +D
Sbjct  641  FGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMD  700

Query  710  FLPSEEEELAFVQGFRELIRLQNMLSAFVDFDLEQT--AMQEQEFADYKSKYLDLYEKVR  767
             +  E+E  AFV++FR + +L   L AF +FD+ ++  +M+EQEF DYKSKY+ +Y+ V+
Sbjct  701  QVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVK  760

Query  768  QNR-KLNKTSVLEEVDFELELIQRDEINVVYILQLLQKa---asasaEKRSLAIERLLQQ  823
             +R  ++K S+L+++DFE+E+++ D INV YI++L+++      A  ++    I R+L++
Sbjct  761  PKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDN  820

Query  824  LQAEVSLRSKKDLIEKFIRDNLPKIEEADDIPDAFEEFMRKEQAASFQAICQQYDLDQEK  883
               + +LR K+DL+  FI D +P + E D+I +A+  F    + + F+ + QQ  +D++ 
Sbjct  821  -ADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQV  879

Query  884  FEQLVKNYLYSQKMPSSD--QLLASRKEKPKLLERNKIA  920
            + ++  +Y YS  +   +  +L++ +K + K   ++ ++
Sbjct  880  LKDITGEYEYSGIVNQDHLKELVGDKKLREKRQTKKAVT  918

79) hsdR in NC_003228


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  623 bits (2355),  Expect = 1e-179, Method: Compositional matrix adjust.
 Identities = 401/947 (43%), Positives = 643/947 (68%), Gaps = 46/947 (4%)

Query  1    MTIQSEQALEQGLIKTLVSMNYQKIEIADENALIVNFRNQLNIH-----NNIELTDDEFN  55
            M  QSE ALE  ++  L S  Y+ + I +E+ L+ NFR+ LN +     N   LTD EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   RIMIHLDSGSIFVKAEKLRNRFPLTRDDESVKWIEFLNTQEWCKNEFQVSNQITDEGRRK  115
            R++  +++ +IF  A  LR++ PL RDDES   + FL+T++WC+N FQ++NQ++ ++  K
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  CRYDVTILVNGLPLVQVELKKRGVELKQAYSQVQRYHKTAFKGLFNYIQIFVISNGVNTR  175
             RYDVTIL+NGLPLVQ+ELK+RG+++++A++QV RY+K  + GLF YIQ+F+ISNG++TR
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTR  180

Query  176  YFANNPNQGYK-FTFPWADFKNNHIDRLDLFAAMFFEQCTLGKMLAKYVVLHQSDKCLMI  234
            Y++NN  + YK   F W+D  NN+I+ L+ F+  F+  C ++KM+++Y++L+++D+ LM 
Sbjct  181  YISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMA  240

Query  235  LRPYQFYAVEALLDKVANSVKNGYIWHTTGSGKTLTSFKAAQLIAEMSDIDKVLFVVDRH  294
            +RPYQ  AVEAL+++ +++ +NGYIWHTTGSGKTLTSFKA+Q+++E  DI KV+F+VDR 
Sbjct  241  MRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRK  300

Query  295  DLDTQTKKEYDAFAPGAVDSTDNTKELVKALQGKK-KLMITTIQKLNNAVQKDRYSKGLQ  353
            DLD+QT  E++ F+ G+VD T+NT +LVK L++K   L++TTIQK+++A+Q++  + +L+
Sbjct  301  DLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNN--AEALD  358

Query  354  GVKDKNIVMIFDECHRSQFGEMHSNITGFFSKIRYFGFTGTPIFADN-ANNGCTTKDIFG  412
              K  ++V I+DECHRSQFG+MH  +   F++ +YFGFTGTP F +N +++G +T DIFG
Sbjct  359  QYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFG  418

Query  413  ERLHEYLIKDAIADENVLGFLVEYHGKWKRK---SENDKQVKSIDTAEVLLKDERIASIT  469
              LH YLIKDAI D NVLGF V+Y    K +   +E D  V +I+T EV L D+R+  I+
Sbjct  419  RCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIA  478

Query  470  DFILSNYNSSTYERDFNAMLAVGGVKMLIKYYDMFKSR----NHDLKIATIFTYTQNEES  525
              I  N +  T +R+++A+++V ++  L+KYYD FK      +H LK+A +F+Y+ NEE 
Sbjct  479  RHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEER  538

Query  526  EDEFTGLGQGFVSVQNTRDILESYIKDYNETFGTEFDTDHFGLYYDDINKR----MKNRQ  581
            ++       G V   ++R+ LE  I+DYN  FGT+F TD F  Y+++I+K     +K+ +
Sbjct  539  NE-------GEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNK  591

Query  582  IDLLIVSDMFLTGFDAKKLNTLYVDKNLNYHGLLQAFSRTNRVLNEKKKFGKITCFRDLK  641
            ID+LIV +MFLTGFD+K LNTLYVDKNL+YH+L+QA+SRTNRV +E K FGKI  +RDLK
Sbjct  592  IDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLK  651

Query  642  QQTDDAIKLYSNNKSSEVVLMKPYEKLVERFNEMAAEFLSYFPTVKSVGNLESELDKRRF  701
            Q+TD+A+KL+S+   ++ VLM+ Y+     F +  AE+ +     + +++++ E +K+ F
Sbjct  652  QNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAF  711

Query  702  VILFRAMLRLRNEVKGYNEFD--AEDLTIEEQRFADYQSKYLDMSNEFAITSEKEDAESI  759
            V  FR + +L   +K+++EFD    ++ ++EQ F DY+SKY+ + +E        +  SI
Sbjct  712  VEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSI  771

Query  760  LQDIDFELELVHRDIINVMYILALLQDL----KPESSSYPKDRKAVLDTMDSNPELRSKI  815
            L+DIDFE+E+++ D INV YI+ L++++    K+E      + + +LD  D +P LR K 
Sbjct  772  LNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNAD-DPTLRLKR  830

Query  816  ALIDNFIKLHIDGRQSNDLPADMESDLDKYI---ATQKAIAIEQVATEEGIDSTLLHEYI  872
             L+ +FI   I      +L+ + + D + YI    +++   ++Q A ++++D  +L +  
Sbjct  831  DLLREFIDDVI-----PELSEEDNID-EAYILFENAKRESEFNQFAQQQAVDEQVLKDIT  884

Query  873  SEYEYLGKPKNEIIKRAIDPLKLSFMDAQSKKKSLIDKMKDIIKLFS  919
            +EYEY G  +++ +K  ++  KL   + +  KK++   + ++   +S
Sbjct  885  GEYEYSGIVNQDHLKELVGDKKLR--EKRQTKKAVTSFVEEVSEKYS  929

80) hsdR in NC_016026


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  621 bits (2347),  Expect = 6e-179, Method: Compositional matrix adjust.
 Identities = 404/953 (43%), Positives = 655/953 (69%), Gaps = 40/953 (4%)

Query  1    MSTQTEQQLENALVAQLETLGWEKVAIANEEELLVNLKRQL-EKHNKVL----FSDYEFK  55
            M  Q+E  LE  ++ QL + G E V+I NE++LL N++  L E+H   L    ++D EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   QILNKMARGNIFEKAKILRDKVDYTKDDGTTGYIELINQVQWCKNEYQVTHQITMVGKYT  115
            ++L  +    IFE A+ILRDK+   +DD +  Y+ +++  +WC+N +Q+T+Q+++ + Y 
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  NRYDVTLLVNGLPLCQIELKRRGLEMKEAFNQTNRYHKHSFAAGYGLFGYIQLFVISNGV  175
             RYDVT+L+NGLPL QIELKRRG++++EAFNQ  RY+K++++   GLF YIQLF+ISNG+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLFRYIQLFIISNGI  177

Query  176  NTKYYANNPVNKRDFK-QTYFWADKANNRITQLSEFAAIFLEKCQLSKLIAKYVVLNESR  234
            +T+Y +NN  +   +K + ++W+DK NNRI  L+EF+  FL  C+++K+I++Y++LNE+ 
Sbjct  178  DTRYISNNDGEI--YKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETD  235

Query  235  QMLMALRPYQYYAVEAIVAQVLTTNKNGYIWHTTGSGKTLTSFKAAQILTQNPKVHKVVF  294
            ++LMA+RPYQ  AVEA++ Q   T++NGYIWHTTGSGKTLTSFKA+Q+L+++  + KV+F
Sbjct  236  NILMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIF  295

Query  295  VVDRKDLDYQTIAEFNSFQEGSVDATNNTGRLVEQFGDST-PLIVTTLQKLNTAISKERH  353
            +VDRKDLD QT  EFN F  GSVD TNNT++LV Q+ D + PLIVTT+QK++ AI  + +
Sbjct  296  LVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAI--QNN  353

Query  354  LKTMESLKDKKMVFIFDECHRSQFGDTHKRITEYFDNVQMFGFTGTPIFADNAAKNALGK  413
              +++  K  K+VFI+DECHRSQFGD H+ + + F+N Q FGFTGTP F +N ++++   
Sbjct  354  AEALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDG---  410

Query  414  RTTKDLFGQQLHSYVITDAIRDENVLKFCVEYIRTFKRKddivdie--veaidTAEVMEA  471
            R+T D+FG+ LH+Y+I DAI+D NVL F V+YI T+K ++   + +  VE+I+T EV  +
Sbjct  411  RSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLS  470

Query  472  PERLEKITDYIIANHDRKTHSQEFTAMFCVSNVKSLVAYYELFRAKKEAGEHNLKVATIF  531
             +R+E I+  I  NHD+ T++++++A+F V ++ +LV YY+ F+      EH LKVA +F
Sbjct  471  DQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVF  530

Query  532  SYQANeedadadgmgtgddmpdegAPENKHSREKLDEYIADYNKMFSTNYSTKDSKLFYA  591
            SY AN             +  +EG  ++ HSR KL+E I DYN  F+TN+ST   + ++ 
Sbjct  531  SYAAN-------------EERNEGEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFN  577

Query  592  YY-KDIGKRVKNKEVDVLLVVNMFLTGFDSPPLNTIYVDKNLKYHGLLQAYSRTNRTMGQ  650
               K++ K VK++ +DVL+VVNMFLTGFDS  LNT+YVDKNLKYH+L+QAYSRTNR   +
Sbjct  578  HISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKE  637

Query  651  KKSQGNIVCFRNLKSATDKTIELFANKEAQEDIILAPYEDYVKKFEQAVANLLAITPDVA  710
             K+ G+IV +R+LK  TD+++ LF++ E  + +++  Y++Y   F +A+A+L A++    
Sbjct  638  TKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQ  697

Query  711  SVDNLLTEEDEAKFIQAFREVIRIKNVLDCFTQFTF--DDLPMDEQLFADFRSKYLDLYD  768
             +D++  E++   F++AFR V ++   L  F +F F   ++ M+EQ F D++SKY+ +YD
Sbjct  698  DMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYD  757

Query  769  KVRSEK-EKERisilddidfeielisRDKINVSYIISLLRNMKGKKPEEQARARKSIMDI  827
             V++ + E E++SIL+DIDFEIE++  D+INVSYI+ L+R++  K   EQ R R  I  +
Sbjct  758  EVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRM  817

Query  828  LDT--EAQLRSKKELIERFISQHFADMPATADVGDEFESYWDQEKQKALVVLSDEEGLDP  885
            LD   ++ LR K++L+  FI + +++++   ++++ +  + +  ++  +  +++++++D 
Sbjct  818  LDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDE  877

Query  886  EGLEKVLGNYLFTEKPPMRDEVIEIMNSRPSLRERATVAERVIGKIRDFVETF  938
            + L  + G+Y ++     +D++ E++  +  LRE+      V + + +  E +
Sbjct  878  QVLKDITGEYEYSGIVN-QDHLKELVGDK-KLREKRQTKKAVTSFVEEVSEKY  928

81) EGYY_11950 in NC_015738


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  619 bits (2338),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 397/945 (43%), Positives = 644/945 (69%), Gaps = 53/945 (5%)

Query  5    DDVVANFRKQLAAFNAPKLVEAKGEAAFSDAEFGRVMIHVDNHSVYESAKILRDKYVLTL  64
            ++++ NFR  L   +A KL       +++D EF R++  ++  +++ESA+ILRDK  L  
Sbjct  31   QQLLDNFRSILNERHADKL----NGDPLTDKEFQRLLTMINGKGIFESARILRDKMPLKR  86

Query  65   DNGRTVYLDFFSSDT-DRNIYQVTHQVTMDKDHKDDVSYKNRYDVTILINGLPLVQIELK  123
            D+   VYL F+ +    +N +Q+T+QV++D       +YK RYDVTILINGLPLVQIELK
Sbjct  87   DDESEVYLSFLDTRHWCQNKFQITNQVSVDD------TYKARYDVTILINGLPLVQIELK  140

Query  124  RPGVEINEAINQINRYRKFSFKGLFRYLQLFIVSNSVQTKYFCNENEMDGGVYNPILKSL  183
            R G++INEA+NQ+ RYRK ++ GLFRY+QLFI+SN+++T+Y+ N+   DG +Y    KS 
Sbjct  141  RRGIDINEAFNQVMRYRKQNYTGLFRYIQLFIISNGIDTRYISNN---DGEIY----KSH  193

Query  184  VFFWTDENNKRINKLDEFTAEFLRRSTITEMLDKYMVIKTTEPVLMVMRPYQIFAVKAAK  243
            +F+W+D +N+RIN L+EFT  FLR   I+ M+ +YM+++ T+ +LM MRPYQ+ AV A  
Sbjct  194  MFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMAMRPYQVHAVEALI  253

Query  244  RRVLESNQNGYVFACTGSGKTLTSFKLAQLLRDEPRVDKVIFLIDRKDLDDQTVDEYNSF  303
            ++  E+++NGY+   TGSGKTLTSFK +Q+L ++  + KVIFL+DRKDLD QT +E+N F
Sbjct  254  HQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRKDLDSQTEEEFNKF  313

Query  304  EKDCVDGSDSTAVLVKQLKQADRKLIVTTIQKMANAVKSKRYEALMDSYRDKKVVFIIDE  363
             K+ VD +++TA LVKQLK+    LIVTTIQKM++A++++     +D Y+  KVVFIIDE
Sbjct  314  SKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNN--AEALDQYKTDKVVFIIDE  371

Query  364  CHRSQFSKMHGDIQRHFRNANYIGFTGTPIFEANKGKDGRTTADVFYAGSKLDACLHRYM  423
            CHRSQF+ MH  +++HF NA+Y+GFTGTP FE N+++DGR+TAD+F      + CLH Y+
Sbjct  372  CHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIF------GRCLHTYL  425

Query  424  IKDAIADGNVLRFSVEYQRTIFAKQVAANGIDPERLGDPDYCRRHNLDLDALYHDDERIR  483
            IKDAI DGNVL FSV+Y  TI A+++ +   + + L +        ++ D +   D+R+ 
Sbjct  426  IKDAIHDGNVLGFSVDYINTIKAQNIDT---ETDELVE-------GINTDEVWLSDQRVE  475

Query  484  VIAEDIFEHHEQHVHPQGKDIYTALFAVDSIKTLGKYYDAFKALNEARPEGERYRVAAIF  543
            +IA +I E+H++  + +    Y+A+F+V+SI +L KYYDAFK +  ++   +  +VA++F
Sbjct  476  LIARHITENHDKYTRNRQ---YSAIFTVQSIPALVKYYDAFKKI--SKDYEHPLKVAGVF  530

Query  544  TYQANEDMDEG--GDEHSQELLGRCMDDYNAMFGTSFAPDSFDAYRKDITRRMKQ--KDL  599
            +Y ANE+ +EG  ++ HS+  L   ++DYN  FGT+F+ D+F+ Y ++I++ +K+  KD 
Sbjct  531  SYAANEERNEGEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKD-  589

Query  600  PQVDILLVVNMMLTGFDAKPLNTLYLDKNLIWHTLVQAYSRTNRVDKVTKQFGQVVSYRD  659
             ++D+L+VVNM LTGFD+K LNTLY+DKNL  H L+QAYSRTNRV+K TK FG++V+YRD
Sbjct  590  NKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRD  649

Query  660  IKRAQDDALRLFSGDGDPNEYLLESYEYYVNKWVNQVPVLRKAAQTVDDAGQLQSEGDIR  719
            +K+  D+AL+LFS   D +  L+  Y+ Y    V+ ++ L+  A   +D +Q+Q E + +
Sbjct  650  LKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKK  709

Query  720  QFVVAFRSLSGTLATLKTFGKFDWADLSVVLDDEEYEGYKSWYLYYHDEAkkrdpkvpvp  779
             FV AFR +S  +  LK+F+ FD +  ++ ++++E+E+YKS Y+   DE K +   V   
Sbjct  710  AFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKV  769

Query  780  vdvdfd---vELVRTDRINVMYILSLLKSAHDAEKSDEERARDIDLVMREIERSDNDALR  836
              ++     +E++R DRINV YI+ L++  +  +K++++R R  D + R ++ +D+ +LR
Sbjct  770  SILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNR--DQIRRMLDNADDPTLR  827

Query  837  AKKDIMEAFIRTRFYDLPEDADIQQAYEQFERESLQAEIESFAYDNGLDAKDVLEVFSEY  896
             K+D++  FI   + +L+E+ +I++AY  FE    ++E++ FA ++++D + + ++ +EY
Sbjct  828  LKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEY  887

Query  897  TFGGSISEEAIRRRLAAYHMGLLKITKMTGAIKEFVVNTYSRYKA  941
             ++G ++++ ++  ++   +   + TK   A+  FV +   +Y +
Sbjct  888  EYSGIVNQDHLKELVGDKKLREKRQTKK--AVTSFVEEVSEKYSS  930

82) Msp_0477 in NC_007681


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  614 bits (2319),  Expect = 9e-177, Method: Compositional matrix adjust.
 Identities = 378/921 (42%), Positives = 626/921 (68%), Gaps = 35/921 (3%)

Query  1    MSTQSESALEDILVDDLANNGYEKITIRNDEELEQNFR-----RQLEKFNNITFTDDEFE  55
            M  QSE ALE  ++++L +NGYE +TIRN+++L +NFR     R+ +K+N   +TD EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   KILLFLKQGTIFDKAQKLRDSYTLQREGQADKWIRFINKDEWCKNYFQVAHQIKSKNKHN  115
            ++L  ++   IF+ A+ LRD   L+R+++++  + F++  +WC+N FQ+++Q+   +  +
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  FRYDVTLLINGLPLVQIELKKRGVEIKQAFNQIKERY-LPTFKGLFQYIQIFVISNGVDT  174
             RYDVT+LINGLPLVQIELK+RG++I++AFNQ+  RY    + GLF+YIQ+F+ISNG+DT
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVM-RYRKQNYTGLFRYIQLFIISNGIDT  179

Query  175  KYFATGIPSSMKFEYTYFWKNKENRNIKQLAEFSQTFLEKCNLAKMITQFMVLNQIDKNI  234
            +Y++       K    ++W +KEN  I+ L EF++TFL  C++AKMI+++M+LN+ D+ +
Sbjct  180  RYISNNDGEIYK-SHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNIL  238

Query  235  MILRAYQKYAVEEIIRQATKIKQNGYVWHTTGSGKTLTSFKTSQILSEDPNIDKVVFVVD  294
            M +R+YQ  AVE +I+QAT   +NGY+WHTTGSGKTLTSFK+SQ+LSE+ +I KV+F+VD
Sbjct  239  MAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVD  298

Query  295  RKDLDTQTMKRFNQYEKDSVAKVYNTYSLIKKLNSSKTKLIITTIQKLSNVATKHQTKVA  354
            RKDLD+QT   FN++ K+SV K  NT  L+K+L+     LI+TTIQK+S+   ++   + 
Sbjct  299  RKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAEALD  358

Query  355  QMKDKRIIFIYDECHRSQFGKMHQSIIDFFTNSLCFGFTGTPIFVENSG-GNKTTKTIFG  413
            Q K  +++FI DECHRSQFG MH+ + + F N+  FGFTGTP F EN + + ++T  IFG
Sbjct  359  QYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFG  418

Query  414  KRLHTYMIKDAIRDNNVLGFSIQYYESVPISKDDVD----VNSLAYEEMLMKDKRLEKNV  469
            + LHTY+IKDAI+D NVLGFS++Y +++   + D +    V+++  +E+ + D+R+E   
Sbjct  419  RCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIA  478

Query  470  EKLLETYPSKTHNGKFNAMFTVSRGKFINKYY----RILKEKAPELKIAAIYNANPNSED  525
              + E     T+N +++A+FTV     + KYY    +I K+    LK+A++++  +N E 
Sbjct  479  RHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEER  538

Query  526  TNGKSDYSY----LSEYMEDYNQTFGTNFSPETFKEYNIDISNRMEK----REIDLLLVK  577
             +G  D +     L E ++DYN  FGTNFS +TF+EY  +IS+ + K      ID+L+V 
Sbjct  539  NEGEVDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVV  598

Query  578  DMYTTGFDCPRLNTLYVDKNLQYHTLLQTFSRTNRIFDKSKAYGNIICFRDISAETDEAL  637
            +M+ TGFD   LNTLYVDKNL+YH L+Q++SRTNR+   +K++G+I+ +RD+  +TD+AL
Sbjct  599  NMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNAL  658

Query  638  TLFSDNEPLEDLLMKDYQTYVDEFNEAYKKFLELTQTVEDAQNLESETEIKEYVENFREL  697
             LFS+ E  + +LM+DY+ Y  EF +A   +  ++   +D ++++ E E K +VE FR +
Sbjct  659  KLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLV  718

Query  698  NRIKSKLDTFPEFTF--DDLDMDEQEYNDHKSVYLDIYDEIK---NDGEPESPLHDIDFE  752
            +++  +L +F EF F   +++M+EQE++D KS Y+ IYDE+K    + E  S L+DIDFE
Sbjct  719  SKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFE  778

Query  753  LELIRDDTINVDYILGLLKYLN-KDDANYEKDLERIKKITKETEQ--LRNKNTLIEKFIE  809
            +E++R+D INV YI++L++ ++ KD A+ +++ ++I+++  ++++  LR K  L+  FI+
Sbjct  779  IEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFID  838

Query  810  KVLGTFDRTEMTVEEKFYEFMRNERRQAFCNLIEKENLDETATRKLIDEYQFSGIMDTTM  869
             V+  +   +  ++E +  F    R   F ++ +++ +DE   + + +EY++SGI++   
Sbjct  839  DVIPELSEED-NIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDH  897

Query  870  IEASFINKPKFKERRVKRNRI  890
            +   ++   K++E+R  ++ +
Sbjct  898  LKE-LVGDKKLREKRQTKKAV  917

83) Celal_0832 in NC_014934


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  608 bits (2296),  Expect = 7e-175, Method: Compositional matrix adjust.
 Identities = 396/942 (43%), Positives = 636/942 (68%), Gaps = 57/942 (6%)

Query  1    MSHQSETILENNLIQQLVGLGYTAVKIPDATALVANLKSQL-----EAFNKTSYSNKEFD  55
            M  QSE  LE ++++QL + GY +V I +   L+ N++S L     + +N  + ++KEF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   GILNHLEKGKVFEKAKTLRDRFSFIRENGEVCYVRFFNSENWNNNLFQVTNQISLEGSYK  115
             +L  ++   +FE A+ LRD+ ++ R++    Y+ F+++ +W +N FQ+TNQ+S++++YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  116  NRYDVTLLVNGLPLVQLELKRRGIEIKEAFNQINRYQLHSFWSTHGLFQYVQLFIISNGG  175
             RYDVT+L+NGLPLVQ+ELKRRGI+I+EAFNQ+ RY+ +++    GLF+Y+QLFIISNG 
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFIISNGI  177

Query  176  NTKYLANNELQS-VLQTFFWADKNNKRITELPEFAAAFLNIDHLGKMIAQYVVINETYKN  234
            +T+Y++NN+ +    + F+W+DK+N+RI  L EF+ +FL   H++KMI++Y+++NET + 
Sbjct  178  DTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNI  237

Query  235  MMVLRPYQYYATEAIIHQVKNTTTNGYIWHTTGSGKTLTSFKASQILMDLPEVYKVVFVV  294
            +M +RPYQ  A EA+IHQ  +T+ NGYIWHTTGSGKTLTSFKASQ+L +  ++ KV+F+V
Sbjct  238  LMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLV  297

Query  295  DRKDLDYQTMKEFNAFKEGSVDTTENTTSLVHQFLGKFKDKKGVRKDSDLIITTIQKLNN  354
            DRKDLD QT  EFN F  GSVD T+NT+ LV Q    +KD     K   LI+TTIQK+++
Sbjct  298  DRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQ----LKD-----KSLPLIVTTIQKMSK  348

Query  355  AISGHNKTKLSPLKNERFVFIFDECHRSQFGDTHARITEFFSNSQLFGFTGTPIFADNAS  414
            AI  +  + L   K ++ VFI+DECHRSQFGD H  + + F+N+Q FGFTGTP F +N S
Sbjct  349  AIQNNAEA-LDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQS  407

Query  415  KNDLGKRTTKDLFGNCLHKYVITDAIRDENVLRFAIEYIGKYKNKS-QTFIDIEVEDIDK  473
            +++   R+T D+FG CLH Y+I DAI+D NVL F+++YI   K ++ +T  D  VE+I+ 
Sbjct  408  QDG---RSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINT  464

Query  474  KEVLDSPKRLTKIADYIIAHHDQKTFSKAYSALFAVSSIDNLITYYDIFQQKKEAGEHNL  533
             EV  S +R+  IA  I  +HD+ T ++ YSA+F+V SI  L+ YYD F++     EH L
Sbjct  465  DEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPL  524

Query  534  RIATIFTYGTNEANDDAQDYLPEDDLGMAAEPQETYKTSHSRDKLEKYIGDYNAMYSTSY  593
            ++A +F+Y++NE  ++++                    +HSR+KLE  I DYN  ++T++
Sbjct  525  KVAGVFSYAANEERNEGEV-----------------DEAHSRGKLEEVIQDYNLNFGTNF  567

Query  594  TTKDQQQFENYFKNISQRLKEREKKNFNDEKDRLDIVIVVNMMLTGFDAKKVNTLYVDKN  653
            +T   + F++YF++IS+ +K   K N      ++D++IVVNM LTGFD+K +NTLYVDKN
Sbjct  568  ST---DTFQEYFNHISKNVKKGVKDN------KIDVLIVVNMFLTGFDSKVLNTLYVDKN  618

Query  654  LKQHGLIQAFSRTNRILGDQKSQGNILCFRNLKKATDDAITLFSNKDAIEVVTMPDYEVI  713
            LK H+LIQA+SRTNR+  + K+ G+I+ +R+LK+ TD+A+ LFS+ +  + V M DY+  
Sbjct  619  LKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEY  678

Query  714  AEKFDEALQKLREITPTYQSVNDLATENDEAAFVQAFRRLLRNMNVLQSYTDFDW--DDL  771
               F +AL  L+ ++   Q ++++  EN+  AFV+AFR + + +  L+++ +FD    ++
Sbjct  679  KAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANI  738

Query  772  PISEQEFADYQGKYKDLYDKVRRANAK-QKTSILADIDFELELIHSDTINVAYIFILLAK  830
             ++EQEF DY++KY  +YD V+   +  +K SIL DIDFE+E++++D INV+YI  L+ +
Sbjct  739  GMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQ  798

Query  831  LknaksseakaqkkaILDLL--GGDTMLRSKRELIEKFIDENLPKIDDTDTIQDEFESYW  888
            +     +E + ++  I  +L  ++D  LR KR+L+  FID+ +P + + D I++ +  + 
Sbjct  799  IDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFE  858

Query  889  QEQKVLALGKLCDEENLDKAQFKALIDTYIYSG---QEPIKD  927
            + ++   + ++ +++ +D   +K + + Y YSG   Q+ +K+
Sbjct  859  NAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQDHLKE  900

84) Krodi_2315 in NC_015496


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  607 bits (2292),  Expect = 2e-174, Method: Compositional matrix adjust.
 Identities = 400/938 (43%), Positives = 631/938 (68%), Gaps = 59/938 (6%)

Query  1    MGHQSEAILENKLIKQLVGLGYTKVSIADGHALVANLKSQL-----EAFNNDSYTDKEFD  55
            M  QSE  LE  ++ QL + GY  V+I + + L+ N++S L     + +N D+ TDKEF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   TILNDLAKGNVFEKAKKLRDRFSFIRTSATGEAEETIYVRFFDSENWNNNLFQVTNQVTQ  115
             +L  +    +FE A+ LRD+ ++ R     + E  +Y+ F+D+ +W +N FQ+TNQV+ 
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKR-----DDESEVYLSFLDTRHWCQNKFQITNQVSV  115

Query  116  EGSYKNRYDVTLLVNGLPLVQIELKRRGTEIKEAFNQINRYQLHSFWSNHGLFQYVQLFV  175
            +++YK RYDVT+L+NGLPLVQIELKRRG +I+EAFNQ+ RY+ +++    GLF+Y+QLF+
Sbjct  116  DDTYKARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFI  172

Query  176  ISNGGNTKYLANNKLQSVK-QTFFWADTNNKNITEIIDFASQFLNPNHLGKMIAKYIVIN  234
            ISNG +T+Y++NN  +  K + F+W+D +N+ I  + +F+  FL P H++KMI++Y+++N
Sbjct  173  ISNGIDTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILN  232

Query  235  ETHKIMMILRPYQYYAVEAIIKQVQTTTDNGYIWHTTGSGKTLTSFKASQILMEvpevtk  294
            ET++I+M +RPYQ  AVEA+I Q   T++NGYIWHTTGSGKTLTSFKASQ+L E  ++ K
Sbjct  233  ETDNILMAMRPYQVHAVEALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKK  292

Query  295  vvfvvDRKDLDYQTMKEFNAFKEGSVDTTNNTNSLVNQFLGTFKDKKGVPKDSDLIITTI  354
            V+F+VDRKDLD QT  EFN F  GSVD TNNT  LV+Q+       K++P    LI+TTI
Sbjct  293  VIFLVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQL-----KDKSLP----LIVTTI  343

Query  355  QKLNNAISGHYRNKLEPIKNERYVFIFDECHRSQFGKTHNKITEFFTNSQLFGFTGTPIF  414
            QK+++AI  +  + L+  K ++ VFI+DECHRSQFG  H  + + F N+Q FGFTGTP F
Sbjct  344  QKMSKAIQNN-AEALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRF  402

Query  415  ADNASKNDLGKRTTKDLFGNCLHKYVITDAIKDENVLRFGIEYVGKYKNKS-NAFFDIEV  473
             +N S+++   R+T D+FG CLH Y+I DAI D NVL F+++Y+   K ++ ++  D  V
Sbjct  403  EENQSQDG---RSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELV  459

Query  474  EDIDKREVFNDPKRLSKIADYIIARHSQKTFDKDYSSLFAVSSIDNAIKYYDIFQKKKEA  533
            E+I+  EV    +R+  IA  I   H + T +++YS++F+V SI   +KYYD F+K    
Sbjct  460  EGINTDEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKD  519

Query  534  GEHDLRIATIFTYGANEDSDFAIDALPDDEMLQAAEPASAYTLSHTRDKLESYIADYNAM  593
             EH L++A +F+Y+ANE+ +              +E   A    H+R+KLE  I DYN  
Sbjct  520  YEHPLKVAGVFSYAANEERN-------------EGEVDEA----HSRGKLEEVIQDYNLN  562

Query  594  YNTSFTTKDQQQFENYFKDISKRLKEREKITFDDEKDRLDIVIVVNMMLTGFDAKKVNTL  653
            + T+F+T   + F++YF++ISK +K   K       +++D++IVVNM LTGFD+K +NTL
Sbjct  563  FGTNFST---DTFQEYFNHISKNVKKGVK------DNKIDVLIVVNMFLTGFDSKVLNTL  613

Query  654  YVDKNLKQHGLIQAFSRTNRTLGDQKSQGNILCFRNLKKATDDAITLFSNKDAIEVVTMP  713
            YVDKNLK H+LIQA+SRTNR   + K+ G+I+ +R+LK+ TD+A+ LFS+ +  + V M 
Sbjct  614  YVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMR  673

Query  714  DYEAIAVKFDEALKNLRDITPTYQSVNDLASEEDEAAFVQAFRRLLRNMNVLQSYTAFEW  773
            DY+     F +AL +L+ ++   Q ++++  E++  AFV+AFR + + +  L+++  F+ 
Sbjct  674  DYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDF  733

Query  774  --DDLHISEKEFEDYKGKYLDLYDKVKRDTAK-EKTSILDDIDFELELIHRDRINVAYIL  830
               ++ ++E+EFEDYK+KY+ +YD VK   +  EK SIL+DIDFE+E+++ DRINV+YI+
Sbjct  734  TKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIM  793

Query  831  KLLAKLKDANTSEAQAQKKAIIDLL--GGDIKLRSKRELIEKFINENLPHIKDEDAIEEE  888
             L+ ++   + +E Q ++  I  +L  ++D  LR KR+L+  FI++ +P++ +ED I+E 
Sbjct  794  DLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEA  853

Query  889  FEQYWQDQKVLALGKLCEEEHLDKAQFKALIDAYIYSG  926
            +  + + ++   + ++ +++ +D   +K + + Y YSG
Sbjct  854  YILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSG  891

85) MASE_18490 in NC_018632


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  597 bits (2256),  Expect = 1e-171, Method: Compositional matrix adjust.
 Identities = 402/968 (42%), Positives = 638/968 (66%), Gaps = 83/968 (8%)

Query  1    MSYQSEQQLEDNFIAQLQQQDYERIQLNDAQALKDNLRKQLSA--LNKLE---ISETEFR  55
            M YQSE  LE + + QL+ ++YE + + + Q L DN+R  L+    +KL+   +++ EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  56   QVRNALIKGNVFDKAKLLRDRISITRDDGSTAYIRFLADSH-EENILQVTNQVTIKGRYK  114
            ++   +    +F+ A++LRD++++ RDD S  Y+ FL   H  +N +Q+TNQV++ + YK
Sbjct  61   RLLTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYK  120

Query  115  NRYDVTVLVNGLPLIQIELKRRGLELKEAFNQVNRYQRHSYWAEDGIFQFVQIFVISNGV  174
             RYDVT+L+NGLPL+QIELKRRG++++EAFNQV RY++++Y    G+F+++Q+F+ISNG+
Sbjct  121  ARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFIISNGI  177

Query  175  NTKYYANFPSNRKPSFK-QTFYWADVDNHRYAKLDQFTSQFLTQKHITDMITKYVVINET  233
            +T+Y   +++N    +K + FYW+D +N+R   L++FT  FL   HI+ MI++Y+++NET
Sbjct  178  DTRY---ISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNET  234

Query  234  DRMLMVMRPYQIYATEAIIARVGERAALPQERQITEDLNGYIWHTTGSGKTLTSFKTAQL  293
            D +LM MRPYQ+ A EA+I +  E +            NGYIWHTTGSGKTLTSFK++Q+
Sbjct  235  DNILMAMRPYQVHAVEALIHQATETSN-----------NGYIWHTTGSGKTLTSFKASQV  283

Query  294  LTTDPSIDRVVFVVDRKDLDYQTAKEFNNFKKGCVDGTDKTNILVKQFLGKEVYYIEEDG  353
            L+ +  I +V+F+VDRKDLD QT  EFN+F KG VD T++T  LVKQ+ +K +       
Sbjct  284  LSEQDDIKKVIFLVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSL-------  336

Query  354  VRKSASQNDGGKLNELRNEKLIVTTIQKLNHAISRKRYKAQMERVREQNIVFIFDECHRS  413
                                LIVTTIQK++ AI  +     +++ + +++VFI+DECHRS
Sbjct  337  -------------------PLIVTTIQKMSKAIQNN--AEALDQYKTDKVVFIIDECHRS  375

Query  414  QFGETHHRICDFFTNHQMFGFTGTPIMAKNAISKSGRKYTTTDLFHKALHKYTIVDAIKD  473
            QFG+ H+ + + F N Q FGFTGTP    N  S+ GR  +T+D+F + LH Y I DAI D
Sbjct  376  QFGDMHRIVRQHFNNAQYFGFTGTPRFEENQ-SQDGR--STADIFGRCLHTYLIKDAIHD  432

Query  474  ENVLRFGVEYVGRYRKKDSANEVDIEVQNIDTKELMESDARLEKIVDYIIEQHGRKTHSK  533
             NVL F+V+Y+   + ++   E D  V+ I+T E+  SD R+E I   I E+H++ T+++
Sbjct  433  GNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARHITENHDKYTRNR  492

Query  534  SFTSMFCVSSVPALTKYYELFAKKKAEGQHDLRIATIFSYSDNEEDPDADGVFDFTELTQ  593
             ++++F V S+PAL KYY+ F K   + +H L++A +FSY+ NEE               
Sbjct  493  QYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEE---------------  537

Query  594  KESSAVAEMPAQYTHSRDKLESYIGDYNAMFGCNYTTKDSESYYNYYN-DISKKVRERKI  652
            ++ + V E     +HSR+KLE  I DYN  FG N++T   + Y+N  + ++ K V++ KI
Sbjct  538  RNEGEVDE-----AHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKI  592

Query  653  DLLLVVNMFLTGFDSKTLNTLFVDKNLKFHGLVQAYSRTNRILNEQKSQGNIVCFRNLKK  712
            D+L+VVNMFLTGFDSK LNTL+VDKNLK+H+L+QAYSRTNR+ +E K+ G+IV +R+LK+
Sbjct  593  DVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQ  652

Query  713  RTDEALALFSNKDAKDTVIMPPYSEFVKLFKEALQKLEAIAPdvdsvddlvdedaeleFI  772
             TD+AL LFS+ +  D V+M  Y E+   F +AL  L A+A   + +D++ DE+    F+
Sbjct  653  NTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFV  712

Query  773  KAFRELMRLRNVLSTFADFDF--DDIGIEEQTFEDYKSKYLDLYDKVKTNTGG-DKESIL  829
             AFR + +L   L +F +FDF   +IG++EQ FEDYKSKY+ +YD VK + G  +K SIL
Sbjct  713  EAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSIL  772

Query  830  EEVDFELELLAMDVINVTYIlnllaklkeaeneeqyqyqyKA-LMQAVGGDPELRSKQEL  888
            +++DFE+E+L  D INV+YI++L+ ++   ++ EQ + + +   M   ++DP LR K++L
Sbjct  773  NDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDL  832

Query  889  IDKFIKENLPDVKNAEDVGEAFSAYWEVEKDKAIKQLATEEDLDEEAVIDVVERIEYTS-  947
            +  FI + +P++ + ++++EA+  + +  ++  ++Q+A ++ +DE+ + D+    EY++ 
Sbjct  833  LREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGI  892

Query  948  --QEPLRE  953
              Q+ L+E
Sbjct  893  VNQDHLKE  900

86) hsdR in NC_008255


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  596 bits (2250),  Expect = 3e-171, Method: Compositional matrix adjust.
 Identities = 381/911 (42%), Positives = 617/911 (68%), Gaps = 49/911 (5%)

Query  29   GYEKVILPNEDALLLNLK-----KQLEKHNKITFSKAEFDKVLNIVNKGSVFEKAKILRQ  83
            GYE V + NE+ LL N++     ++ +K N   ++  EF+++L ++N  ++FE A+ILR+
Sbjct  21   GYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQRLLTMINGKGIFESARILRD  80

Query  84   RQHIIRDNGDNLYFEFLNTDYWCQNEYQVTNQLSQEGRYLNRYDVTLLINGLPLVQIELK  143
            +  + RD+  ++Y+ FL+T  WCQN +Q+TNQ+S ++ Y  RYDVT+LINGLPLVQIELK
Sbjct  81   KMPLKRDDESEVYLSFLDTRHWCQNKFQITNQVSVDDTYKARYDVTILINGLPLVQIELK  140

Query  144  RRGLELKEAFNQIDRYRKHSFGSGHGLYHFVQLFVISNGVNTKYFGNFGIHKQEY-LQTF  202
            RRG++++EAFNQ+ RYRK+++    GL++++QLF+ISNG++T+Y++N   + + Y  + F
Sbjct  141  RRGIDINEAFNQVMRYRKQNYT---GLFRYIQLFIISNGIDTRYISN--NDGEIYKSHMF  195

Query  203  HWTDENNKPLNNILNGFTDTFLEPCHISKMICKYIVLHETEKKLMVLRPYQYFAVENIIK  262
             W+D +N+ +N  LN FT+TFL PCHI+KMI +Y++L+ET++ LM +RPYQ  AVE +I 
Sbjct  196  YWSDKENNRINT-LNEFTETFLRPCHIAKMISRYMILNETDNILMAMRPYQVHAVEALIH  254

Query  263  KVKENEVLNGYDINKNGYIWHTTGSGKTLTSFKASQILSNIPAIKKVVFVVDRKDLDYQT  322
            +  E         ++NGYIWHTTGSGKTLTSFKASQ+LS+   IKKV+F+VDRKDLD QT
Sbjct  255  QATET--------SNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRKDLDSQT  306

Query  323  NQEYEKFSQGCVSSVGNTDDLIKKFNDPAERIIVTTIQKLNNAISGKNIYKMKAMQDQRM  382
            ++E++KFS+G V    NT +L+K+++D +  +IVTTIQK+++AI  +    +   + +++
Sbjct  307  EEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNNAE-ALDQYKTDKV  365

Query  383  VFIFDECHRSQFGDTHKNIVSYFTNIQLFGFTGTPILVEN-ANGEKTTASLFGKCLHKYV  441
            VFI+DECHRSQFGD H+ +   F N Q FGFTGTP + EN +++ ++TA +FG+CLH Y+
Sbjct  366  VFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGRSTADIFGRCLHTYL  425

Query  442  ITDAIRDENVLRFSVEYIQTFKQKEHIVDLK--IEQINETEVFEAPERKEAIVNYILQHH  499
            I DAI+D NVL FSV+YI+T+K ++   +    +E IN  EV  + +R E I   I ++H
Sbjct  426  IKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARHITENH  485

Query  500  KQKTQQGKYCAMMCVQDIDSVIQYYEILKAMKKAGEHQLKIITIFSFAQNEDPLDYEIKT  559
             + T++ +Y A+  VQ I ++++YY+ +K + K  EH LK+  +FS+A NE+  + E+  
Sbjct  486  DKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKDYEHPLKVAGVFSYAANEERNEGEVD-  544

Query  560  ELSVVEEPKALYGLPPHRRELLDAYIGDFNQLYDTAHSTKDSQSFYTYYNDVAKKA-KNN  618
                           +H R  L+  I D+N  ++T  ST   Q ++   +   KK+ K+N
Sbjct  545  --------------EAHSRGKLEEVIQDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDN  590

Query  619  EMDILLVANMFLTGFDSKYLNTLYVDKNLQYHGLIQAFSRTNRTHDKNKTQGNIVCFRNL  678
             +D+L+V NMFLTGFDSK LNTLYVDKNL+YH+LIQA+SRTNR +   K  G+IV +R+L
Sbjct  591  KIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDL  650

Query  679  KDKTDEAITLFSNREAIDEVIVAPYETYVEEFNKAVNQLKAIVPNVDSVDDLYTEEDQLK  738
            K++TD+A+ LFS+ E  D V++  Y+ Y  EF  A+ +LKA+  + + +D++  E+++  
Sbjct  651  KQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVALKPQDMDQVQDENEKKA  710

Query  739  FILAFRNMIRLHKKMSHYTE--FTWDDLEIEEQSFLDYSSKYQDLKDSI-VHKSDKEKTS  795
            F+ AFR + +L  ++  + E  FT  ++ ++EQ F DY SKY  + D +   +++ EK S
Sbjct  711  FVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVS  770

Query  796  ILDDIDFELELIKKDTINVSYIVQLLFklkvkkgkkdkeevekeIFNLLNT--EVSLRSK  853
            IL+DIDFE+E++++D INVSYI++L+ +    K+K +++    +I  +L+   + +LR K
Sbjct  771  ILNDIDFEIEILRNDRINVSYIMDLV-RQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLK  829

Query  854  RELIEKFIKENMSKIVEAEDIVDEFTRFWNEEQQKAFDELVQDENLSAERTQHLIEGYLF  913
            R+L+  FI + ++ + E ++I + +  F N  ++  F+++ Q++ +  +  +++   Y +
Sbjct  830  RDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFAQQQAVDEQVLKDITGEYEY  889

Query  914  S---EQEPLRD  921
            S   +Q+ L++
Sbjct  890  SGIVNQDHLKE  900

87) Entcl_0678 in NC_014618


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  581 bits (2194),  Expect = 8e-167, Method: Compositional matrix adjust.
 Identities = 402/940 (43%), Positives = 651/940 (70%), Gaps = 54/940 (5%)

Query  1    MATQSEYELETQLVEQLVGMHYERVNVTDEASMKANLRKQIEIH--NRLEQAPLTDSEFN  58
            M  QSE+ LET+++EQL +  YE V + +E  +  N+R  ++ +  ++L+  PLTD EF+
Sbjct  1    MVYQSEFALETEMMEQLKSNGYETVTIRNEQQLLDNFRSILNERHADKLNGDPLTDKEFQ  60

Query  59   RIFLHLTKGNEVIDRAKILRDRYQLLRDDGTEKWLSFINKEEWCQNEFQVTSQVKQFNAE  118
            R+ L + +G+ +++ A+ILRD+  L RDD +E  LSF++  +WCQN FQ+T+QV    + 
Sbjct  61   RL-LTMINGKGIFESARILRDKMPLKRDDESEVYLSFLDTRHWCQNKFQITNQV----SV  115

Query  119  QNTRKTRFDVTLLINGLPLVQIELKRRGLGLKEAFNQINRYHRDAFWVGSGLFQYVQIFI  178
            ++T K+R+DVT+LINGLPLVQIELKRRG++++EAFNQ+ RY+++ +   +GLF+Y+Q+FI
Sbjct  116  DDTYKARYDVTILINGLPLVQIELKRRGIDINEAFNQVMRYRKQNY---TGLFRYIQLFI  172

Query  179  ISNGVDTKYYANNRANHF-EQTFFWTDEKNNPLKALEKFTDAFLKVCHIAKMITHYTVLN  237
            ISNG+DT+Y +NN ++ +  + F+W+D  NN +++L+ FT++FL+ CHIAKMI++Y +LN
Sbjct  173  ISNGIDTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILN  232

Query  238  ETRKCLMVMRPYQFYACEAMIHHVKDNLHKQGRPENGYIWHTTGSGKTLTSFKASQVIME  297
            ET + LM MRPYQ  A EA+IH+  +       ++NGYIWHTTGSGKTLTSFKASQV+ E
Sbjct  233  ETDNILMAMRPYQVHAVEALIHQATET------SNNGYIWHTTGSGKTLTSFKASQVLSE  286

Query  298  MPEvdrvifvvdrrdldYQTAKEFNGFAKDSVDTTNNTSTLIkhlkqsstkltlttiqkl  357
              ++ +VIF+VDR+DLD QT  EFN F+K+SVD TNNT+ L+K+LK+ S  L +TTIQK+
Sbjct  287  QDDIKKVIFLVDRKDLDSQTEEEFNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKM  346

Query  358  NNAITHEGYKAQLAHLRKERIVFIFDECHRSQFGDTHKAIVNFFENAQLFGFTGTPIFAN  417
            ++AI +++    L + + +++VFI+DECHRSQFGD H+ + + F+NAQ FGFTGTP F +
Sbjct  347  SKAIQNNA--EALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEE  404

Query  418  NVNITNGVKQTTELLFDKCLHKYVIVDAIRDENVLRFAVEYVGTYKRKESSNEIDIDVED  477
            N   +++ + T+++ F++CLH Y+I DAI+D NVL F+V+Y+ T K ++   E D  VE+
Sbjct  405  NQ--SQDGRSTADI-FGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEG  461

Query  478  IDTKEVMESDIRLGKITDYILAHHNAKTRNREFTAMFCVGSVDMLITYYKLFKEKQAALQ  537
            I+T EV  SD R+  I+  I  +H+  TRNR+++A+F V S+  L+ YY  FK       
Sbjct  462  INTDEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKK------  515

Query  538  AADANY-KPLKIATIFTYAANEADKSDKEAVNGLLDEEDISLPQGAKVDTSSRDHLDSFI  596
                +Y  PLK+A +F+YAANE  +                  +G   ++ SR+ L+  I
Sbjct  516  -ISKDYEHPLKVAGVFSYAANEERN------------------EGEVDEAHSRGKLEEVI  556

Query  597  EDYNELYGTSYSANDSKSFYNYY-KNIAQRTKEKGIDILLVVNMFLTGFDSPALNTLYVD  655
            +DYN  +GT++S++  + ++N   KN+ +  K++ ID+L+VVNMFLTGFDS  LNTLYVD
Sbjct  557  QDYNLNFGTNFSTDTFQEYFNHISKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVD  616

Query  656  KNLRFHGLVQAFSRTNRILNEKKSHGNIVCFRNLKKATDDAIALFSNKDASSVVLVKPFD  715
            KNL++H+L+QA+SRTNR+ +E K+ G+IV +R+LK+ TD+A+ LFS+ + +  VL++ +D
Sbjct  617  KNLKYHDLIQAYSRTNRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYD  676

Query  716  EYFGDYQDAVDRLLALTPTVESVDGLPDEEAQLAFVTAFRDVMRLKNILESFADFD--DA  773
            EY +++ DA+  L A++   + +D + DE+ + AFV AFR V +L   L +F +FD   A
Sbjct  677  EYKAEFVDALAELKAVALKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKA  736

Query  774  AKPLSDQTLADFTSKYLDI-HDkvkkhsskekvsILEDVDFEVSLIHRDEINVGYILRLL  832
               +++Q + D+ SKY+ I ++   K++  EKVSIL+D+DFE+ +++ D INV+YI+ L+
Sbjct  737  NIGMNEQEFEDYKSKYFAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLV  796

Query  833  AGIQAMPPkeqqeqkkkIMDIVDS--DVTLRSKRELIDNFIEKSLLHASHDEDITQVFEA  890
              I+     EQQ ++ +I  ++D+  D TLR KR+L+ +FI+  + + S++++I + +  
Sbjct  797  RQIDLKDKAEQQRNRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYIL  856

Query  891  YVEQEKGKALATLCSEERLDSIKLTGLLDNYLFTDVMPRE  930
            + +  +   +  +  ++ +D   L ++ ++Y +++++ ++
Sbjct  857  FENAKRESEFNQFAQQQAVDEQVLKDITGEYEYSGIVNQD  896

88) hsdR2 in NC_021224


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  574 bits (2166),  Expect = 1e-164, Method: Compositional matrix adjust.
 Identities = 341/782 (44%), Positives = 556/782 (72%), Gaps = 23/782 (2%)

Query  2    RLVQVFVISNGNETRYFANGDGELNSNFMFYWTDEHNNWLNDLDAFTTTFLSKPRLHSLI  61
            R +Q+F+ISNG +TRY++N DGE+  + MFYW+D +NN++N L+ FT TFL   ++  +I
Sbjct  166  RYIQLFIISNGIDTRYISNNDGEIYKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMI  225

Query  62   AKYTVFDSSDHKMLLMRPYQIYATEAIIKQAIDHPHENGYVWHTTGSGKTITSFKASQLL  121
            ++Y +++ +D+ ++ MRPYQ+ A EA+I QA + ++ NGY+WHTTGSGKT+TSFKASQ+L
Sbjct  226  SRYMILNETDNILMAMRPYQVHAVEALIHQATETSN-NGYIWHTTGSGKTLTSFKASQVL  284

Query  122  LQETDAEKVIFMIDRADLDIQTVKNFSAYLPETTGGQSPLDRTDNTAALVKQLSSNDNGL  181
             ++ D  KVIF++DR DLD QT  +F+ +      +++++D+T+NTA LVKQL  +   L
Sbjct  285  SEQDDIKKVIFLVDRKDLDSQTEEEFNKF------SKGSVDKTNNTAQLVKQLKDKSLPL  338

Query  182  IVTTIQKMNNAVSNDRYKDILTPYHDRKVIFIEDESHRSQMGEMRKNVNHWFKNAQHFGF  241
            IVTTIQKM++A+ N+   + L  Y   KV+FI DE HRSQ G+M++ V + F+NAQ FGF
Sbjct  339  IVTTIQKMSKAIQNN--AEALDQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQYFGF  396

Query  242  TGTPIFQQNMGPDGRTTKDLYENQLHQYLIRDAVRDGNVLGFSIQYLSTFEETDHDI-TD  300
            TGTP F++N + DGR+T D++   LH YLI+DA++DGNVLGFS++Y++T+   + D  TD
Sbjct  397  TGTPRFEENQSQDGRSTADIFGRCLHTYLIKDAIHDGNVLGFSVDYINTIKAQNIDTETD  456

Query  301  EQVPGIDTQEVYESEERLTKIVEHILLNHSHITKNKHYNAIFTVANTRMALKYYQLFRKL  360
            E V GI+T+EV  S++R+  I  HI  NH   T+N++Y+AIFTV +    +KYY+ F+K+
Sbjct  457  ELVEGINTDEVWLSDQRVELIARHITENHDKYTRNRQYSAIFTVQSIPALVKYYDAFKKI  516

Query  361  DPD--HNLKVTTIFTWAANEDDNEEHQKQDDVTSRMGLDQVVKDYNQMYGTDFSTDKFKD  418
              D  H LKV+ +F+ AANE+ NE +   D+  SR  L++V++DYN  +GT+FSTD F++
Sbjct  517  SKDYEHPLKVAGVFSYAANEERNEGE--VDEAHSRGKLEEVIQDYNLNFGTNFSTDTFQE  574

Query  419  YFADVSKRMRDHNDQTPTDNIDILIVVNMFLTGFDSKRLSTLYVDKNLQWHGLIQAFSRT  478
            YF ++SK ++        ++ID+LIVVNMFLTGFDSK L+TLYVDKNL+ H+LIQA+SRT
Sbjct  575  YFNHISKNVK---KGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRT  631

Query  479  NRVEGKQKPFGNIIAYRNIKNKTDEAVALFSDGDSSG-FLAPDYDELKAEFTDKIGQLLT  537
            NRVE   KPFG+I+ YR++K++TD+A+ LFS+ + ++  L  DYDE KAEF D +++L +
Sbjct  632  NRVEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKA  691

Query  538  VTPDVQSVDDLYNRGDDALYEFVMAFRAVLRVYNRIRVYDDFEWAQYEPEFSDQLMEAFR  597
            V+   Q +D++  ++++    FV AFR V ++  R++ +D+F+ ++ +   ++Q  E ++
Sbjct  692  VALKPQDMDQV--QDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYK  749

Query  598  GKYFTAYQTIYQRKTQ-ERVSILDDVDFDISLLETDTINVDYIVNLISGIDLMSSTERKQ  656
            +KYF+ Y+ +  ++ + E+VSIL+D+DF+I +L  D INV YI++L+  IDL   +E+++
Sbjct  750  SKYFAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQR  809

Query  657  DIQKIEHLLDNATNDQLKSKVELLEQFLNEVLPTLDTDDDIGMSLSNFMAESQRAAIKGF  716
            + ++I ++LDNA +  L+ K +LL +F+++V+P L  +D+I+ +   F    + + ++ F
Sbjct  810  NRDQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQF  869

Query  717  SQEHHLSEDFVNEQISDYNFYGKTKDKEIIDKLSANGLGFREKRQAKREIKDFVSTIDRK  776
            +Q++ + E+ +++  ++Y++ G  ++ ++ + ++ + L  REKRQ+K+ +  FV  +  K
Sbjct  870  AQQQAVDEQVLKDITGEYEYSGIVNQDHLKELVGDKKL--REKRQTKKAVTSFVEEVSEK  927

Query  777  YS  778
            YS
Sbjct  928  YS  929

89) hsdR in NC_016603


> NC_007350_R2|14|G14|73661363|YP_300144.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|-|13413..16205|-|SSP0054|type 
I site-specific restriction-modification system restriction 
subunit
Length=930

 Score =  552 bits (2084),  Expect = 4e-158, Method: Compositional matrix adjust.
 Identities = 382/944 (41%), Positives = 624/944 (67%), Gaps = 68/944 (7%)

Query  21   GYERVQLRNETTLLENLK-----RKIQQLNKIGNPFSDSEWKQIWHYLSNETTVFKKAEL  75
            GYE V +RNE  LL+N++     R  ++LN  G+P++D E +++   + N   +F  A +
Sbjct  21   GYETVTIRNEQQLLDNFRSILNERHADKLN--GDPLTDKEFQRLLT-MINGKGIFESARI  77

Query  76   LRNRCPVKFDDGSVRHVHFISEDVQ--ENSFQVSNQVVADHRDLNGRTSRFDVTLLINGF  133
            LR++ P+K DD S   + F+ +  +  +N FQ++NQV  D    +   +R+DVT+LING+
Sbjct  78   LRDKMPLKRDDESEVYLSFL-DTRHWCQNKFQITNQVSVD----DTYKARYDVTILINGL  132

Query  134  PLVQIEIKKSGVELKKAFEQTLEYAKTAYKSGEGLFGFIQFFVISNGVNCLYYANGTQSI  193
            PLVQIE+K+ G++++ AF+Q + Y K  Y    GLF +IQ+F+ISNG++  Y +N    I
Sbjct  133  PLVQIELKRRGIDINEAFNQVMRYRKQNYT---GLFRYIQLFIISNGIDTRYISNNDGEI  189

Query  194  --EFAFAWTDENNKKVNDLGKFTNSFLDPKHLTKMLMQYIVMHQSTQSLMILRPYQIYAV  251
                 F W+D +N+++N L  FT++FL P H++KM+ +Y++++++ + LM +RPYQ+ AV
Sbjct  190  YKSHMFYWSDKENNRINTLNEFTETFLRPCHIAKMISRYMILNETDNILMAMRPYQVHAV  249

Query  252  EKIIEHVKTSPDNAYIWHTTGSGKTLTSFKASQLLIKQPEIQRVIFVVDRKDLDGQTAEE  311
            E +I++   +++N+YIWHTTGSGKTLTSFKASQ+L  Q +I++VIF+VDRKDLD+QT EE
Sbjct  250  EALIHQATETSNNGYIWHTTGSGKTLTSFKASQVLSEQDDIKKVIFLVDRKDLDSQTEEE  309

Query  312  FNKFRENSVDSTTNTANLVKQLRSLDNRLVVTTIQKLNNAISNDRYEDEMAFLKDQKVIF  371
            FNKF   SVD T NTA+LVKQL+     L+VTTIQK+++AI N+   + +   K +KV+F
Sbjct  310  FNKFSKGSVDKTNNTAQLVKQLKDKSLPLIVTTIQKMSKAIQNN--AEALDQYKTDKVVF  367

Query  372  IFDECHRSQFGETHQKIKKFFKNAQMFGFTGTPIFEKNGHTVGGEKFTTKYLFPKLLHKY  431
            I+DECHRSQFG+ H+ +++ F+NAQ FGFTGTP FE N    G    +T  +F + LH Y
Sbjct  368  IIDECHRSQFGDMHRIVRQHFNNAQYFGFTGTPRFEENQSQDGR---STADIFGRCLHTY  424

Query  432  VIVDAINDGNVLPFNIDYLGRFVHKNPEAQ-EEKIESIDKRELFENERRIEKIVREVIAT  490
            +I DAI+DGNVL F++DY+  +  +N +++ +E +E+I+  E+  +++R+E I R++   
Sbjct  425  LIKDAIHDGNVLGFSVDYINTIKAQNIDTETDELVEGINTDEVWLSDQRVELIARHITEN  484

Query  491  HASKTNQREFNAMFCVSSVPALIQYYDKFEKVQAELLEKAQQNNELY-QPLNIATIFSYG  549
            H   T +R+++A+F V S+PAL++YYD F K+  +           Y +PL++A +FSY+
Sbjct  485  HDKYTRNRQYSAIFTVQSIPALVKYYDAFKKISKD-----------YEHPLKVAGVFSYA  533

Query  550  QSSAQQPSEAADDFIAEEEVDAPKQVDEFAEKKLTQYIANYNQTFNTNYSLGSGFYDYYQ  609
             +  +           E EVD +      +  KL + I +YN  F TN+S    F +Y++
Sbjct  534  ANEER----------NEGEVDEAH-----SRGKLEEVIQDYNLNFGTNFS-TDTFQEYFN  577

Query  610  NISSRVKAYGTDKNKGKEIDILLVVNMFLTGFDSKRLNTLYVDKNLKHHGLIQAFSRTNR  669
            +IS  VK       K++ ID+L+VVNMFLTGFDSK LNTLYVDKNLK H+LIQA+SRTNR
Sbjct  578  HISKNVK----KGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDLIQAYSRTNR  633

Query  670  VYGQTKPFGNIVCFRNLKQATDDALIMFSDKEAKNVVVVSPYEQVIQLYESAVNNLLNIT  729
            V  +TKPFG+IV +R+LKQ TD+AL +FS+ E  + V++  Y++    +  A+ +L  ++
Sbjct  634  VEKETKPFGKIVNYRDLKQNTDNALKLFSQTEDTDRVLMRDYDEYKAEFVDALAELKAVA  693

Query  730  PTCQSVDDLYGESEKESFVYAFRDVMRLNNRLKMYSEYD--QDATSFTKQDFENYSSKYK  787
               Q +D++ +E+EK +FV AFR V +L  RLK + E+D  +   +   Q+FE+Y SKY 
Sbjct  694  LKPQDMDQVQDENEKKAFVEAFRLVSKLVLRLKAFDEFDFTKANIGMNEQEFEDYKSKY-  752

Query  788  DLAFSYQMRPNVA--EKTSVLDEVDFQLDLLFSDRVNVDYilkllnliinsknQEQKDSR  845
             +A+  +++P+ +  EK S+L+++DF++++L +DR+NV YI+ L+  I    + EQ+ +R
Sbjct  753  -FAIYDEVKPKRGEVEKVSILNDIDFEIEILRNDRINVSYIMDLVRQIDLKDKAEQQRNR  811

Query  846  VKQLKDLLNN--NISLYDKRDLIEKFINEQIPKMVTGETVQEAFAAFWDAEKHRAYDIFC  903
              Q++ +L+N  + +L  KRDL+  FI++ IP +   + ++EA+  F +A ++  ++ F 
Sbjct  812  -DQIRRMLDNADDPTLRLKRDLLREFIDDVIPELSEEDNIDEAYILFENAKRESEFNQFA  870

Query  904  NEEQLKKDEFNRVADNFEFTERLPLIHEIKELPIKKPPLGRKRA  947
            +++ +  + ++ +++++E++  +   H +KEL   K    ++++
Sbjct  871  QQQAVDEQVLKDITGEYEYSGIVNQDH-LKELVGDKKLREKRQT  913