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Homologs of binR gene of NC_007168_R3

560

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) binR
( YP_254224.1 )

resolvase/integrase BinR

NC_007168
(Staphylococcus haemolyticus JCSC1435)

5e-68

100

2) SH1761
( YP_253676.1 )

DNA-invertase

NC_007168
(Staphylococcus haemolyticus JCSC1435)

3e-65

3) binL
( YP_254524.1 )

DNA-invertase

NC_007168
(Staphylococcus haemolyticus JCSC1435)

3e-65

4) resR
( YP_005327050.1 )

transposon Tn552 DNA-invertase BinR

NC_016942
(Staphylococcus aureus MSHR1132)

5e-65

5) SAAG_03516
( YP_008470932.1 )

resolvase/integrase BinR

NC_022126
(Staphylococcus aureus 55/2053)

1e-64

6) EFAU004_p1057
( YP_005376187.1 )

multiple promoter invertase

NC_017032
(Enterococcus faecium Aus0004)

4e-64

7) hin
( YP_008390848.1 )

DNA-invertase Hin

NC_021987
(Enterococcus faecium AUS0085)

4e-64

8) EFAU085_p2071
( YP_008396517.1 )

multiple promoter invertase

NC_021995
(Enterococcus faecium AUS0085)

1e-63

9) CA347_2800
( YP_008126868.1 )

resolvase, N terminal domain protein

NC_021552
(Staphylococcus aureus CA-347)

1e-63

10) binL
( YP_005740737.1 )

Resolvase, N-terminal domain-containing protein

NC_017339
(Staphylococcus aureus JKD6159)

1e-63

11) tnpR
( YP_031709.1 )

transposon resolvase

NC_005951
(Staphylococcus aureus MSSA476)

1e-63

12) binL
( NP_395549.1 )

DNA-invertase

NC_003140
(Staphylococcus aureus N315)

1e-63

13) binL
( YP_005751296.1 )

resolvase family site-specific recombinase

NC_017345
(Staphylococcus aureus TCH60)

1e-63

14) SLGD_00885
( YP_003471150.1 )

Resolvase/integrase Bin

NC_013893
(Staphylococcus lugdunensis HKU09-01)

1e-63

15) SLGD_01662
( YP_003471880.1 )

Resolvase/integrase Bin

NC_013893
(Staphylococcus lugdunensis HKU09-01)

1e-63

16) SPSINT_1864
( YP_004150028.1 )

Resolvase/integrase Bin

NC_014925
(Staphylococcus pseudintermedius HKU10-03)

1e-63

17) SAR0719
( YP_040147.1 )

resolvase

NC_002952
(Staphylococcus aureus MRSA252)

3e-63

18) MS7_0042
( YP_005756509.1 )

DNA-invertase hin

NC_017351
(Staphylococcus aureus 11819-97)

5e-63

19) SAAG_00704
( YP_008448216.1 )

resolvase/integrase BinR

NC_022113
(Staphylococcus aureus 55/2053)

5e-63

20) tnpR
( YP_008167503.1 )

resolvase TnpR

NC_021670
(Staphylococcus aureus Bmb9393)

5e-63

21) SABB_05219
( YP_008169679.1 )

resolvase TnpR

NC_021670
(Staphylococcus aureus Bmb9393)

5e-63

22) binL
( YP_005745937.1 )

Resolvase, N-terminal domain-containing protein

NC_017341
(Staphylococcus aureus JKD6008)

5e-63

23) tnpR
( YP_041214.1 )

resolvase

NC_002952
(Staphylococcus aureus MRSA252)

5e-63

24) SAT0131_02800
( YP_005753846.1 )

Resolvase

NC_017347
(Staphylococcus aureus T0131)

5e-63

25) SPSE_2390
( YP_006016442.1 )

transposon Tn552 resolvase

NC_017568
(Staphylococcus pseudintermedius ED99)

5e-63

26) tnpR
( YP_005732668.1 )

resolvase

NC_017331
(Staphylococcus aureus TW20)

7e-63

27) tnpR
( YP_005759121.1 )

transposon Tn552 resolvase

NC_017352
(Staphylococcus aureus TW20)

7e-63

28) pli0056
( NP_569209.1 )

hypothetical protein

NC_003383
(Listeria innocua Clip11262)

8e-63

29) M641_15695
( YP_008285616.1 )

DNA invertase

NC_021828
(Listeria monocytogenes R2-502)

2e-62

30) LMOSLCC2372_p0024
( YP_006932066.1 )

resolvase

NC_018889
(Listeria monocytogenes SLCC2372)

2e-62

31) LMOSLCC2482_p0024
( YP_006950396.1 )

resolvase

NC_018888
(Listeria monocytogenes SLCC2482)

2e-62

32) LMOSLCC2755_p0032
( YP_003877850.1 )

resolvase

NC_014495
(Listeria monocytogenes SLCC2755)

2e-62

33) LM5578_p78
( YP_003415208.1 )

DNA invertase

NC_013767
(Listeria monocytogenes 08-5578)

4e-62

34) M643_p00310
( YP_008406944.1 )

DNA invertase

NC_022045
(Listeria monocytogenes N1-011A)

4e-62

35) USA300HOU_pUSA300HOUMR0014
( YP_001569059.1 )

recombinase

NC_010063
(Staphylococcus aureus TCH1516)

5e-61

36) SEA0006
( YP_187535.1 )

resolvase family site-specific recombinase

NC_006663
(Staphylococcus epidermidis RP62A)

5e-61

37) ECTR2_2588
( YP_005751267.1 )

transposon Tn552 DNA-invertase binR

NC_017344
(Staphylococcus aureus ECT-R 2)

2e-58

38) BN843_p60
( YP_007869784.1 )

Resolvase/integrase Bin

NC_021060
(Staphylococcus aureus M1)

2e-58

39) uc509_p5009
( YP_006998528.1 )

resolvase/integrase

NC_019432
(Lactococcus lactis UC509.9)

2e-58

40) SaurJH1_2823
( YP_001312316.1 )

resolvase domain-containing protein

NC_009619
(Staphylococcus aureus JH1)

3e-58

41) SaurJH9_2746
( YP_001220626.1 )

resolvase domain-containing protein

NC_009477
(Staphylococcus aureus JH9)

3e-58

42) LLKF_p0016
( YP_003354937.1 )

resolvase

NC_013657
(Lactococcus lactis KF147)

3e-58

43) ENT_30330
( YP_007809065.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021023
(Enterococcus sp. 7L76)

4e-58

44) int
( YP_005877277.1 )

resolvase/integrase

NC_017493
(Lactococcus lactis A76)

4e-58

45) LACR_D15
( YP_796542.1 )

site-specific recombinase, DNA invertase Pin related protein

NC_008506
(Lactococcus lactis SK11)

4e-58

46) tnpR
( YP_005867337.1 )

DNA-invertase/resolvase

NC_017483
(Lactococcus lactis CV56)

5e-58

47) tnpR
( YP_001032050.1 )

DNA-invertase/resolvase

NC_009004
(Lactococcus lactis MG1363)

5e-58

48) LLNZ_03700
( YP_006356151.1 )

DNA-invertase/resolvase

NC_017949
(Lactococcus lactis NZ9000)

5e-58

49) Sinf_1973
( YP_005220781.1 )

resolvase/integrase Bin

NC_016837
(Streptococcus infantarius CJ18)

5e-58

50) MS7_2726
( YP_005756454.1 )

DNA-invertase hin

NC_017350
(Staphylococcus aureus 11819-97)

7e-58

51) binR
( YP_007586564.1 )

Resolvase/integrase

NC_020539
(Staphylococcus aureus ST228)

7e-58

52) binR
( YP_007622295.1 )

Resolvase/integrase

NC_020567
(Staphylococcus aureus ST228)

7e-58

53) binR
( YP_007578594.1 )

Resolvase/integrase

NC_020530
(Staphylococcus aureus ST228 (isolate=10388))

7e-58

54) binR
( YP_007578616.1 )

Resolvase/integrase

NC_020531
(Staphylococcus aureus ST228 (isolate=10497))

7e-58

55) binR
( YP_007620309.1 )

Resolvase/integrase

NC_020565
(Staphylococcus aureus ST228 (isolate=15532))

7e-58

56) binR
( YP_007582567.1 )

Resolvase/integrase

NC_020534
(Staphylococcus aureus ST228 (isolate=16035))

7e-58

57) binR
( YP_007586549.1 )

Resolvase/integrase

NC_020538
(Staphylococcus aureus ST228 (isolate=18412))

7e-58

58) MCCL_plsB0032
( YP_002559363.1 )

resolvase

NC_011996
(Macrococcus caseolyticus JCSC5402)

2e-57

59) tnpR
( YP_245576.1 )

resolvase

NC_007103
(Bacillus cereus E33L)

1e-54

60) BCAH820_B0219
( YP_002455101.1 )

DNA-invertase hin

NC_011777
(Bacillus cereus AH820)

1e-54

61) SE_p411
( NP_863236.1 )

resolvase/integrase

NC_005005
(Staphylococcus epidermidis ATCC 12228)

4e-50

62) uc509_p8044
( YP_006998445.1 )

site-specific recombinase, DNA invertase Pin related protein

NC_019430
(Lactococcus lactis UC509.9)

7e-50

63) SE_p509
( NP_863212.1 )

DNA-invertase

NC_005004
(Staphylococcus epidermidis ATCC 12228)

1e-48

64) BTF1_32536
( YP_006614074.1 )

putative resolvase

NC_018510
(Bacillus thuringiensis HD-789)

2e-48

65) Cri9333_0511
( YP_007140979.1 )

Resolvase domain-containing protein

NC_019753
(Crinalium epipsammum PCC 9333)

3e-40

66) Cal6303_5631
( YP_007112964.1 )

Resolvase domain-containing protein

NC_019727
(Calothrix sp. PCC 6303)

9e-40

67) Fphi_1744
( YP_001678470.1 )

invertase/recombinase-like protein

NC_010336
(Francisella philomiragia ATCC 25017)

2e-39

68) Mmar10_1503
( YP_756733.1 )

resolvase

NC_008347
(Maricaulis maris MCS10)

3e-39

69) Runsl_3919
( YP_004657407.1 )

resolvase domain-containing protein

NC_015703
(Runella slithyformis DSM 19594)

3e-39

70) PSR_56002
( YP_003566136.1 )

DNA-invertase

NC_014028
(Salinibacter ruber M8)

3e-38

71) amb3309
( YP_422672.1 )

site-specific recombinase

NC_007626
(Magnetospirillum magneticum AMB-1)

4e-38

72) Cha6605_6161
( YP_007318366.1 )

site-specific recombinase, DNA invertase Pin

NC_020053
(Chamaesiphon minutus PCC 6605)

7e-38

73) A225_R1p0710
( YP_006501598.1 )

Resolvase-like protein

NC_018107
(Klebsiella oxytoca E718)

2e-37

74) Sfri_3474
( YP_752144.1 )

resolvase domain-containing protein

NC_008345
(Shewanella frigidimarina NCIMB 400)

2e-37

75) lp12_2566
( YP_005186908.1 )

transposase (resolvase, DNA invertase)

NC_016811
(Legionella pneumophila ATCC 43290)

3e-37

76) LPE509_00469
( YP_007567012.1 )

Resolvase/integrase

NC_020521
(Legionella pneumophila Philadelphia 1)

3e-37

77) lpg2573
( YP_096579.1 )

resolvase

NC_002942
(Legionella pneumophila Philadelphia 1)

3e-37

78) LP6_2606
( YP_008064297.1 )

transposase (resolvase, DNA invertase)

NC_021350
(Legionella pneumophila Thunder Bay)

3e-37

79) ECO55CA74_25503
( YP_006157087.1 )

DNA-invertase

NC_017653
(Escherichia coli RM12579)

4e-37

80) Dfer_2312
( YP_003086696.1 )

Resolvase domain

NC_013037
(Dyadobacter fermentans DSM 18053)

5e-37

81) pKPR_0023
( YP_007988879.1 )

hypothetical protein

NC_021231
(Klebsiella pneumoniae SB3432)

6e-37

82) pKPR_0034
( YP_007988890.1 )

hypothetical protein

NC_021231
(Klebsiella pneumoniae SB3432)

7e-37

83) KPR_1871
( YP_007990851.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

7e-37

84) KPR_4281
( YP_007993255.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

7e-37

85) SDY_1916
( YP_403513.1 )

DNA-invertase

NC_007606
(Shigella dysenteriae Sd197)

1e-36

86) Alide_4514
( YP_004129092.1 )

resolvase domain protein

NC_014911
(Alicycliphilus denitrificans BC)

1e-36

87) Bcep1808_7245
( YP_001109905.1 )

resolvase domain-containing protein

NC_009227
(Burkholderia vietnamiensis G4)

1e-36

88) ESA_pESA2p06563
( YP_001440432.1 )

hypothetical protein

NC_009779
(Cronobacter sakazakii ATCC BAA-894)

1e-36

89) ECL_A223
( YP_003602718.1 )

resolvase domain-containing protein

NC_014107
(Enterobacter cloacae ATCC 13047)

1e-36

90) PADK2_14220
( YP_006482827.1 )

resolvase domain-containing protein

NC_018080
(Pseudomonas aeruginosa DK2)

1e-36

91) L483_16565
( YP_008095092.1 )

DNA invertase

NC_021491
(Pseudomonas putida H8234)

1e-36

92) Tmz1t_2154
( YP_002355790.1 )

resolvase

NC_011662
(Thauera sp. MZ1T)

1e-36

93) pinE
( YP_003467839.1 )

e14 prophage inversion of adjacent DNA

NC_013892
(Xenorhabdus bovienii SS-2004)

7e-37

94) Rru_B0010
( YP_425046.1 )

resolvase

NC_007641
(Rhodospirillum rubrum ATCC 11170)

7e-37

95) ECSE_2565
( YP_002293840.1 )

phage DNA invertase

NC_011415
(Escherichia coli SE11)

8e-37

96) EKO11_3654
( YP_005279292.1 )

Resolvase domain-containing protein

NC_016902
(Escherichia coli KO11FL)

1e-36

97) gin
( YP_006162600.1 )

putative DNA-invertase

NC_017660
(Escherichia coli KO11FL)

1e-36

98) LY180_01330
( YP_008563412.1 )

DNA invertase

NC_022364
(Escherichia coli LY180)

1e-36

99) gin
( YP_006123051.1 )

phage DNA invertase

NC_017635
(Escherichia coli W)

1e-36

100) gin
( YP_006171714.1 )

DNA-invertase

NC_017664
(Escherichia coli W)

1e-36

101) Anacy_1373
( YP_007155795.1 )

Resolvase domain protein

NC_019771
(Anabaena cylindrica PCC 7122)

2e-36

102) Anacy_2120
( YP_007156504.1 )

Resolvase domain protein

NC_019771
(Anabaena cylindrica PCC 7122)

2e-36

103) Anacy_2144
( YP_007156523.1 )

Resolvase domain protein

NC_019771
(Anabaena cylindrica PCC 7122)

2e-36

104) Anacy_2173
( YP_007156550.1 )

Resolvase domain protein

NC_019771
(Anabaena cylindrica PCC 7122)

2e-36

105) Anacy_6026
( YP_007160074.1 )

Resolvase domain protein

NC_019773
(Anabaena cylindrica PCC 7122)

2e-36

106) Anacy_6064
( YP_007160109.1 )

Resolvase domain protein

NC_019773
(Anabaena cylindrica PCC 7122)

2e-36

107) Anacy_6137
( YP_007160177.1 )

Resolvase domain protein

NC_019774
(Anabaena cylindrica PCC 7122)

2e-36

108) SO_A0019
( NP_720358.1 )

ISSod9, DNA-invertase

NC_004349
(Shewanella oneidensis MR-1)

6e-36

109) SO_A0170
( NP_720484.1 )

ISSod9, DNA-invertase

NC_004349
(Shewanella oneidensis MR-1)

6e-36

110) hin
( NP_927405.1 )

DNA-invertase HIN

NC_005126
(Photorhabdus luminescens TTO1)

1e-35

111) Arth_0466
( YP_829966.1 )

resolvase

NC_008541
(Arthrobacter sp. FB24)

8e-36

112) pinE
( YP_003711874.1 )

e14 prophage; inversion of adjacent DNA

NC_014228
(Xenorhabdus nematophila ATCC 19061)

1e-35

113) pREC1_0084
( YP_345145.1 )

site-specific recombinase

NC_007486
(Rhodococcus erythropolis PR4)

2e-35

114) G432_19435
( YP_007592298.1 )

resolvase

NC_020542
(Sphingomonas sp. MM-1)

2e-35

115) G432_19730
( YP_007592350.1 )

resolvase

NC_020542
(Sphingomonas sp. MM-1)

2e-35

116) G432_21670
( YP_007592555.1 )

resolvase

NC_020544
(Sphingomonas sp. MM-1)

2e-35

117) G432_00275
( YP_007614381.1 )

resolvase

NC_020561
(Sphingomonas sp. MM-1)

2e-35

118) G432_10070
( YP_007616335.1 )

resolvase

NC_020561
(Sphingomonas sp. MM-1)

2e-35

119) Veis_1403
( YP_996184.1 )

resolvase domain-containing protein

NC_008786
(Verminephrobacter eiseniae EF01-2)

2e-35

120) BAST_0134
( YP_006864305.1 )

Tn3 family transposase

NC_018720
(Bifidobacterium asteroides PRL2011)

3e-35

121) G432_20910
( YP_007618206.1 )

resolvase

NC_020562
(Sphingomonas sp. MM-1)

3e-35

122) Bacsa_3704
( YP_004260698.1 )

Resolvase domain

NC_015165
(Bacteroides salanitronis DSM 18170)

6e-35

123) G432_21645
( YP_007592552.1 )

DNA-invertase Gin

NC_020544
(Sphingomonas sp. MM-1)

6e-35

124) G432_21310
( YP_007618286.1 )

DNA-invertase Gin

NC_020562
(Sphingomonas sp. MM-1)

6e-35

125) G432_21895
( YP_007618307.1 )

DNA-invertase Gin

NC_020563
(Sphingomonas sp. MM-1)

6e-35

126) SFHH103_03337
( YP_005190654.1 )

putative resolvase domain protein

NC_016812
(Sinorhizobium fredii HH103)

7e-35

127) SFHH103_04152
( YP_005191409.1 )

Transposon Tn552 resolvase

NC_016814
(Sinorhizobium fredii HH103)

7e-35

128) Zymop_0379
( YP_004661572.1 )

Resolvase domain-containing protein

NC_015709
(Zymomonas mobilis ATCC 29192)

1e-34

129) EcDH1_2489
( YP_006092415.1 )

Resolvase domain-containing protein

NC_017625
(Escherichia coli DH1)

1e-34

130) pinE
( YP_006128495.1 )

e14 prophage; site-specific DNA recombinase

NC_017638
(Escherichia coli DH1)

1e-34

131) pin
( YP_489425.1 )

site-specific DNA recombinase

NC_007779
(Escherichia coli K-12)

1e-34

132) pinE
( NP_415676.1 )

e14 prophage; site-specific DNA recombinase

NC_000913
(Escherichia coli K12)

1e-34

133) ABLL_0896
( YP_005553088.1 )

resolvase

NC_017192
(Arcobacter sp. L)

1e-34

134) hin
( YP_002238667.1 )

DNA-invertase hin

NC_011283
(Klebsiella pneumoniae 342)

1e-34

135) Xaut_0536
( YP_001415449.1 )

resolvase domain-containing protein

NC_009720
(Xanthobacter autotrophicus Py2)

1e-34

136) amb3169
( YP_422532.1 )

site-specific recombinase

NC_007626
(Magnetospirillum magneticum AMB-1)

1e-34

137) HDEF_0740
( YP_002923619.1 )

resolvase

NC_012751
(Candidatus Hamiltonella defensa T5A)

2e-34

138) GBP346_A2066
( YP_002896769.1 )

DNA-invertase

NC_012695
(Burkholderia pseudomallei MSHR346)

2e-34

139) pinE
( YP_004662947.1 )

DNA-invertase from lambdoid prophage e14

NC_015710
(Simkania negevensis Z)

2e-34

140) ZZ6_0410
( YP_006517833.1 )

resolvase domain-containing protein

NC_018145
(Zymomonas mobilis ATCC 29191)

2e-34

141) UWK_03613
( YP_007469776.1 )

site-specific recombinase, DNA invertase Pin

NC_020305
(Desulfocapsa sulfexigens DSM 10523)

2e-34

142) SL003B_0645
( YP_004302374.1 )

Invertase recombinase-like protein

NC_015259
(Polymorphum gilvum SL003B-26A1)

3e-34

143) invA
( YP_910147.1 )

DNA invertase-like protein

NC_008618
(Bifidobacterium adolescentis ATCC 15703)

4e-34

144) amad1_21363
( YP_006979065.1 )

transposase

NC_019394
(Alteromonas macleodii AltDE1)

4e-34

145) I633_22401
( YP_008169973.1 )

transposase

NC_021709
(Alteromonas macleodii English Channel 615)

4e-34

146) I607_20072
( YP_008174007.1 )

transposase

NC_021711
(Alteromonas macleodii Ionian Sea U4)

4e-34

147) I876_09780
( YP_008196352.1 )

transposase

NC_021717
(Alteromonas macleodii Ionian Sea U7)

4e-34

148) I634_09835
( YP_008176082.1 )

transposase

NC_021712
(Alteromonas macleodii Ionian Sea U8)

4e-34

149) I635_21364
( YP_008198422.1 )

transposase

NC_021718
(Alteromonas macleodii Ionian Sea UM7)

4e-34

150) ENC_16960
( YP_007845501.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021046
(Enterobacter cloacae NCTC 9394)

5e-34

151) Arth_4383
( YP_829135.1 )

resolvase

NC_008537
(Arthrobacter sp. FB24)

5e-34

152) DMR_40330
( YP_002955410.1 )

DNA-invertase

NC_012796
(Desulfovibrio magneticus RS-1)

6e-34

153) Atc_2p09
( YP_004750506.1 )

recombinase

NC_015853
(Acidithiobacillus caldus SM-1)

7e-34

154) Entcl_1125
( YP_003940676.1 )

resolvase domain-containing protein

NC_014618
(Enterobacter cloacae SCF1)

1e-33

155) tnpR
( YP_003546984.1 )

resolvase

NC_014007
(Sphingobium japonicum UT26S)

8e-34

156) XFa0019
( NP_061675.1 )

recombinase

NC_002490
(Xylella fastidiosa 9a5c)

2e-33

157) hin
( YP_003038864.1 )

putative dna-invertase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-33

158) pin
( YP_006510304.1 )

site-specific DNA recombinase; e14 prophage

NC_018141
(Legionella pneumophila Lorraine)

2e-33

159) Acife_1046
( YP_004783540.1 )

resolvase domain-containing protein

NC_015942
(Acidithiobacillus ferrivorans SS3)

3e-33

160) Zmob_0412
( YP_005620710.1 )

resolvase domain-containing protein

NC_017262
(Zymomonas mobilis ATCC 10988)

4e-33

161) Za10_0407
( YP_003225541.1 )

resolvase

NC_013355
(Zymomonas mobilis NCIMB 11163)

4e-33

162) ZMO0888
( YP_162623.1 )

resolvase domain-containing protein

NC_006526
(Zymomonas mobilis ZM4)

4e-33

163) G432_07750
( YP_007615871.1 )

resolvase

NC_020561
(Sphingomonas sp. MM-1)

4e-33

164) Cyan7822_6640
( YP_003891018.1 )

Resolvase domain protein

NC_014504
(Cyanothece sp. PCC 7822)

6e-33

165) Cyan7822_6519
( YP_003900359.1 )

resolvase domain-containing protein

NC_014534
(Cyanothece sp. PCC 7822)

6e-33

166) ACMV_P2_00400
( YP_004285718.1 )

recombinase

NC_015187
(Acidiphilium multivorum AIU301)

6e-33

167) Mjls_2258
( YP_001070535.1 )

resolvase domain-containing protein

NC_009077
(Mycobacterium sp. JLS)

8e-33

168) SL003B_3610
( YP_004305336.1 )

Invertase recombinase-like protein

NC_015259
(Polymorphum gilvum SL003B-26A1)

1e-32

169) BamMC406_6608
( YP_001812277.1 )

resolvase domain-containing protein

NC_010553
(Burkholderia ambifaria MC40-6)

2e-32

170) Plut_0854
( YP_374762.1 )

invertase/recombinase like protein

NC_007512
(Chlorobium luteolum DSM 273)

2e-32

171) Ppro_3714
( YP_899558.1 )

resolvase domain-containing protein

NC_008607
(Pelobacter propionicus DSM 2379)

2e-32

172) Sphch_4111
( YP_004556196.1 )

Fis family transcriptional regulator

NC_015595
(Sphingobium chlorophenolicum L-1)

2e-32

173) Dsui_2526
( YP_005028718.1 )

site-specific recombinase, DNA invertase Pin

NC_016616
(Dechlorosoma suillum PS)

2e-32

174) PP1Y_Spl249
( YP_004537946.1 )

resolvase domain-containing protein

NC_015582
(Novosphingobium sp. PP1Y)

2e-32

175) pinR
( YP_008578744.1 )

DNA invertase

NC_022436
(Desulfovibrio gigas ATCC 19364)

4e-32

176) tnpR
( YP_006993121.2 )

resolvase, N terminal domain protein

NC_019425
(Carnobacterium maltaromaticum LMA28)

4e-32

177) CJA_1226
( YP_001981719.1 )

invertase/recombinase like protein

NC_010995
(Cellvibrio japonicus Ueda107)

4e-32

178) SE451236_19955
( YP_008266983.1 )

DNA-invertase

NC_021820
(Salmonella enterica 08-1736)

5e-32

179) hin
( YP_005238855.1 )

DNA-invertase Hin

NC_016856
(Salmonella enterica 14028S)

5e-32

180) CFSAN001921_03220
( YP_008254047.1 )

DNA-invertase

NC_021814
(Salmonella enterica CFSAN001921)

5e-32

181) STMMW_27391
( YP_005233766.1 )

DNA-invertase hin

NC_016854
(Salmonella enterica D23580)

5e-32

182) hin
( NP_461699.1 )

DNA-invertase Hin

NC_003197
(Salmonella enterica LT2)

5e-32

183) hin
( YP_005182647.1 )

DNA-invertase hin

NC_016810
(Salmonella enterica SL1344)

5e-32

184) hin
( YP_005243755.1 )

DNA-invertase Hin

NC_016857
(Salmonella enterica ST4/74)

5e-32

185) STMDT12_C28260
( YP_005248522.1 )

DNA-invertase Hin

NC_016860
(Salmonella enterica T000240)

5e-32

186) STU288_14035
( YP_007903898.1 )

DNA-invertase

NC_021151
(Salmonella enterica U288)

5e-32

187) hin
( YP_005253265.1 )

DNA-invertase Hin

NC_016863
(Salmonella enterica UK-1)

5e-32

188) mlr9265
( NP_085804.1 )

invertase/recombinase like protein

NC_002679
(Mesorhizobium loti MAFF303099)

1e-31

189) SL003B_0703
( YP_004302432.1 )

Invertase recombinase-like protein

NC_015259
(Polymorphum gilvum SL003B-26A1)

5e-32

190) SBOV27871
( YP_008506613.1 )

H inversion protein

NC_022241
(Salmonella enterica 3114)

5e-32

191) SNSL254_A2967
( YP_002042013.1 )

DNA-invertase hin

NC_011080
(Salmonella enterica SL254)

5e-32

192) L083_1637
( YP_007949627.1 )

hypothetical protein

NC_021191
(Actinoplanes sp. N902-109)

6e-32

193) Nmul_D2813
( YP_413492.1 )

resolvase-like protein

NC_007617
(Nitrosospira multiformis ATCC 25196)

6e-32

194) Xfasm12_1562
( YP_001776103.1 )

recombinase

NC_010513
(Xylella fastidiosa M12)

6e-32

195) hin
( YP_004662915.1 )

DNA-invertase hin

NC_015710
(Simkania negevensis Z)

6e-32

196) Shew_3862
( YP_001095984.1 )

resolvase domain-containing protein

NC_009092
(Shewanella loihica PV-4)

7e-32

197) SEEB0189_06320
( YP_008307610.1 )

DNA-invertase

NC_021844
(Salmonella enterica CFSAN000189)

7e-32

198) Cyan7425_5431
( YP_002478387.1 )

Resolvase domain protein

NC_011880
(Cyanothece sp. PCC 7425)

7e-32

199) tnpR
( YP_003415134.1 )

resolvase

NC_013767
(Listeria monocytogenes 08-5578)

7e-32

200) M643_p00290
( YP_008406940.1 )

resolvase

NC_022045
(Listeria monocytogenes N1-011A)

7e-32

201) M641_15675
( YP_008285612.1 )

resolvase

NC_021828
(Listeria monocytogenes R2-502)

7e-32

202) LMOSLCC2372_p0028
( YP_006932070.1 )

resolvase

NC_018889
(Listeria monocytogenes SLCC2372)

7e-32

203) LMOSLCC2482_p0029
( YP_006950401.1 )

resolvase

NC_018888
(Listeria monocytogenes SLCC2482)

7e-32

204) LMOSLCC2755_p0037
( YP_003877855.1 )

resolvase

NC_014495
(Listeria monocytogenes SLCC2755)

7e-32

205) Mvol_0481
( YP_003707114.1 )

Resolvase domain-containing protein

NC_014222
(Methanococcus voltae A3)

8e-32

206) CFSAN001992_19675
( YP_007473647.1 )

DNA-invertase hin

NC_020307
(Salmonella enterica CFSAN001992)

8e-32

207) SeSA_A2913
( YP_002115725.1 )

DNA-invertase hin

NC_011094
(Salmonella enterica CVM19633)

8e-32

208) ST548_p3173
( YP_007391425.1 )

DNA-invertase

NC_020181
(Enterobacter aerogenes EA1509E)

8e-32

209) RHA1_ro03112
( YP_703073.1 )

resolvase

NC_008268
(Rhodococcus jostii RHA1)

8e-32

210) Oant_4685
( YP_001373284.1 )

resolvase domain-containing protein

NC_009671
(Ochrobactrum anthropi ATCC 49188)

9e-32

211) SEEH1578_22675
( YP_008248584.1 )

DNA-invertase

NC_021810
(Salmonella enterica 41578)

9e-32

212) SU5_03259
( YP_006088867.1 )

DNA-invertase

NC_017623
(Salmonella enterica B182)

9e-32

213) CFSAN002069_18405
( YP_008252435.1 )

DNA-invertase

NC_021812
(Salmonella enterica CFSAN002069)

9e-32

214) SeHA_C2948
( YP_002046730.1 )

DNA-invertase hin

NC_011083
(Salmonella enterica SL476)

9e-32

215) pin
( YP_003455098.1 )

site-specific DNA recombinase; e14 prophage

NC_013861
(Legionella longbeachae NSW150)

1e-31

216) cgR_0559
( YP_001137429.1 )

hypothetical protein

NC_009342
(Corynebacterium glutamicum R)

1e-31

217) SLG_p_00300
( YP_004831150.1 )

invertase/recombinase like protein

NC_015974
(Sphingobium sp. SYK-6)

1e-31

218) CVAR_0973
( YP_004759400.1 )

DNA invertase

NC_015859
(Corynebacterium variabile DSM 44702)

1e-31

219) YSA_03464
( YP_006385755.1 )

putative DNA invertase

NC_017986
(Pseudomonas putida ND6)

1e-31

220) XALc_1566
( YP_003376055.1 )

invertase/recombinase

NC_013722
(Xanthomonas albilineans GPE PC73)

1e-31

221) PAJ_2645
( YP_005935521.1 )

DNA-invertase from lambdoid prophage e14

NC_017531
(Pantoea ananatis AJ13355)

1e-31

222) Bcep1808_7192
( YP_001109853.1 )

resolvase domain-containing protein

NC_009227
(Burkholderia vietnamiensis G4)

1e-31

223) SPAB_03441
( YP_001589621.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-31

224) Q7S_25766
( YP_006258976.1 )

Resolvase domain-containing protein

NC_017773
(Rahnella aquatilis HX2)

2e-31

225) STY1643
( NP_456054.1 )

DNA-invertase

NC_003198
(Salmonella enterica CT18)

3e-31

226) t1346
( NP_805145.1 )

DNA-invertase

NC_004631
(Salmonella enterica Ty2)

3e-31

227) XF2028
( NP_299310.1 )

DNA invertase

NC_002488
(Xylella fastidiosa 9a5c)

3e-31

228) pin
( NP_644789.1 )

invertase recombinase-like protein

NC_003922
(Xanthomonas axonopodis 306)

3e-31

229) XAC29_22439
( YP_007630957.1 )

invertase recombinase-like protein

NC_020797
(Xanthomonas axonopodis Xac29-1)

3e-31

230) cin
( YP_005033781.1 )

DNA-invertase

NC_016619
(Azospirillum brasilense Sp245)

3e-31

231) pin
( NP_644692.1 )

invertase/recombinase like protein

NC_003921
(Xanthomonas axonopodis 306)

4e-31

232) XAC29_22824
( YP_007638756.1 )

invertase/recombinase like protein

NC_020801
(Xanthomonas axonopodis Xac29-1)

4e-31

233) A225_R1p0425
( YP_006501699.1 )

invertase

NC_018107
(Klebsiella oxytoca E718)

4e-31

234) G432_19965
( YP_007592395.1 )

resolvase

NC_020542
(Sphingomonas sp. MM-1)

5e-31

235) SCD19.06
( NP_628521.1 )

DNA invertase

NC_003888
(Streptomyces coelicolor A3(2))

5e-31

236) G432_19250
( YP_007592261.1 )

invertase/recombinase like protein

NC_020542
(Sphingomonas sp. MM-1)

6e-31

237) UMNK88_1004
( YP_006132792.1 )

DNA-invertase pinH

NC_017641
(Escherichia coli UMNK88)

6e-31

238) B479_27024
( YP_007232197.1 )

TnpR2

NC_019906
(Pseudomonas putida PC9)

6e-31

239) XCAW_b00030
( YP_007652748.1 )

invertase recombinase-like protein

NC_020817
(Xanthomonas citri Aw12879)

6e-31

240) pin
( YP_003915122.1 )

site-specific DNA recombinase; e14 prophage

NC_014544
(Legionella longbeachae NSW150)

7e-31

241) E2348C_1831
( YP_002329352.1 )

DNA invertase

NC_011601
(Escherichia coli E2348/69)

7e-31

242) XACM_2281
( YP_004851842.1 )

Site-specific recombinase

NC_016010
(Xanthomonas axonopodis F1)

7e-31

243) XALr_3242
( YP_005994898.1 )

probable resolvase protein

NC_017555
(Xanthomonas albilineans GPE PC73)

7e-31

244) resR
( YP_004662952.1 )

transposon Tn552 DNA-invertase BinR

NC_015710
(Simkania negevensis Z)

1e-30

245) Tint_3248
( YP_003644898.1 )

resolvase

NC_014155
(Thiomonas intermedia K12)

1e-30

246) finB
( YP_209695.1 )

putative resolvase/DNA invertase

NC_006873
(Bacteroides fragilis NCTC 9343)

1e-30

247) GBP346_A2075
( YP_002896778.1 )

recombinase

NC_012695
(Burkholderia pseudomallei MSHR346)

1e-30

248) HDEF_1047
( YP_002923883.1 )

inversion of adjacent DNA

NC_012751
(Candidatus Hamiltonella defensa T5A)

1e-30

249) Pnap_4123
( YP_973154.1 )

resolvase domain-containing protein

NC_008757
(Polaromonas naphthalenivorans CJ2)

1e-30

250) pin
( YP_002966231.1 )

site-specific DNA recombinase

NC_012809
(Methylobacterium extorquens AM1)

1e-30

251) RAF_pORF1262
( YP_002845764.1 )

Site-specific recombinase, DNA invertase Pin-like protein

NC_012634
(Rickettsia africae ESF-5)

1e-30

252) CVAR_2792
( YP_004761204.1 )

transposase for insertion sequence element

NC_015859
(Corynebacterium variabile DSM 44702)

7e-31

253) STBHUCCB_14330
( YP_005216991.1 )

Min

NC_016832
(Salmonella enterica P-stx-12)

7e-31

254) TY21A_06825
( YP_007925669.1 )

DNA-invertase

NC_021176
(Salmonella enterica Ty21a)

7e-31

255) ACMV_P4_00310
( YP_004285778.1 )

recombinase

NC_015188
(Acidiphilium multivorum AIU301)

7e-31

256) XC_2601
( YP_243670.1 )

invertase/recombinase protein

NC_007086
(Xanthomonas campestris 8004)

8e-31

257) XCC1630
( NP_637000.1 )

invertase/recombinase protein

NC_003902
(Xanthomonas campestris ATCC 33913)

8e-31

258) pin
( YP_003499699.1 )

DNA-invertase

NC_013941
(Escherichia coli CB9615)

9e-31

259) SBO_1391
( YP_407842.1 )

DNA-invertase

NC_007613
(Shigella boydii Sb227)

9e-31

260) RSPPHO_01146
( YP_005416742.1 )

Site-specific recombinase

NC_017059
(Rhodospirillum photometricum DSM 122)

2e-30

261) PT7_0578
( YP_004415742.1 )

DNA invertase

NC_015458
(Pusillimonas sp. T7-7)

2e-30

262) RHA1_ro03159
( YP_703120.1 )

resolvase

NC_008268
(Rhodococcus jostii RHA1)

2e-30

263) W5S_2866
( YP_006283821.1 )

DNA-invertase

NC_017845
(Pectobacterium sp. SCC3193)

2e-30

264) RD1_C0010
( YP_771883.1 )

site-specific recombinase

NC_008388
(Roseobacter denitrificans OCh 114)

2e-30

265) tnpR
( YP_245571.1 )

resolvase

NC_007103
(Bacillus cereus E33L)

2e-30

266) resR1
( YP_006396491.1 )

transposon Tn552 DNA-invertase BinR

NC_018000
(Sinorhizobium fredii USDA 257)

2e-30

267) YBT020_29391
( YP_005563666.1 )

resolvase domain-containing protein

NC_017199
(Bacillus thuringiensis YBT-020)

2e-30

268) YBT020_28669
( YP_005569307.1 )

resolvase domain-containing protein

NC_017201
(Bacillus thuringiensis YBT-020)

2e-30

269) SFHH103_03984
( YP_005191300.1 )

Transposon Tn552 DNA-invertase binR

NC_016813
(Sinorhizobium fredii HH103)

2e-30

270) Psest_4043
( YP_007242143.1 )

site-specific recombinase, DNA invertase Pin

NC_019936
(Pseudomonas stutzeri RCH2)

3e-30

271) ECO103_1894
( YP_003221833.1 )

DNA-invertase

NC_013353
(Escherichia coli 12009)

3e-30

272) ETEC_2009
( YP_006115576.1 )

putative DNA-invertase

NC_017633
(Escherichia coli ETEC H10407)

3e-30

273) SSON53_08190
( YP_005456188.1 )

DNA invertase

NC_016822
(Shigella sonnei 53G)

3e-30

274) pin
( YP_006143361.1 )

DNA-invertase (site specific recombinase) from prophage

NC_017646
(Escherichia coli CE10)

3e-30

275) PST_0242
( YP_001170791.1 )

DNA invertase

NC_009434
(Pseudomonas stutzeri A1501)

3e-30

276) inv
( YP_003365546.1 )

phage DNA invertase

NC_013716
(Citrobacter rodentium ICC168)

3e-30

277) inv
( YP_003367101.1 )

phage DNA-invertase

NC_013716
(Citrobacter rodentium ICC168)

3e-30

278) ECOK1_2592
( YP_006101741.1 )

site-specific recombinase resolvase family protein

NC_017628
(Escherichia coli IHE3034)

3e-30

279) pin
( YP_539936.1 )

DNA-invertase

NC_007946
(Escherichia coli UTI89)

3e-30

280) ECABU_c18600
( YP_006105936.1 )

DNA invertase from prophage

NC_017631
(Escherichia coli ABU 83972)

3e-30

281) pin
( YP_002407948.1 )

DNA-invertase (site specific recombinase) from prophage

NC_011750
(Escherichia coli IAI39)

3e-30

282) PFLU5282A
( YP_002874784.1 )

putative DNA invertase

NC_012660
(Pseudomonas fluorescens SBW25)

3e-30

283) Celgi_0271
( YP_004599363.1 )

Resolvase domain protein

NC_015671
(Cellvibrio gilvus ATCC 13127)

4e-30

284) HYPDE_34678
( YP_007915106.1 )

resolvase-like protein

NC_021172
(Hyphomicrobium denitrificans 1NES1)

4e-30

285) hin
( YP_217689.1 )

site-specific recombinase

NC_006905
(Salmonella enterica SC-B67)

4e-30

286) Mycsm_01247
( YP_007291070.1 )

site-specific recombinase, DNA invertase Pin

NC_019966
(Mycobacterium smegmatis JS623)

4e-30

287) tnpR
( YP_006203892.1 )

putative resolvase

NC_017724
(Escherichia coli ETEC H10407)

5e-30

288) SARI_00048
( YP_001569143.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

6e-30

289) ECSE_1871
( YP_002293146.1 )

phage recombinase

NC_011415
(Escherichia coli SE11)

6e-30

290) MmarC7_1490
( YP_001330701.1 )

resolvase domain-containing protein

NC_009637
(Methanococcus maripaludis C7)

6e-30

291) P12B_c2722
( YP_006169734.1 )

DNA-invertase

NC_017663
(Escherichia coli P12b)

1e-29

292) Sta7437_4816
( YP_007134941.1 )

Resolvase domain protein

NC_019749
(Stanieria cyanosphaera PCC 7437)

1e-29

293) DMR_37200
( YP_002955097.1 )

site-specific recombinase

NC_012796
(Desulfovibrio magneticus RS-1)

1e-29

294) BCQ_PT41
( YP_002533107.1 )

Min

NC_011971
(Bacillus cereus Q1)

1e-29

295) Swit_5399
( YP_001260274.1 )

resolvase domain-containing protein

NC_009507
(Sphingomonas wittichii RW1)

6e-30

296) A225_2413
( YP_006498133.1 )

DNA-invertase

NC_018106
(Klebsiella oxytoca E718)

7e-30

297) Emtol_0068
( YP_006870509.1 )

Resolvase domain-containing protein

NC_018743
(Emticicia oligotrophica DSM 17448)

7e-30

298) E2348C_0835
( YP_002328400.1 )

DNA invertase

NC_011601
(Escherichia coli E2348/69)

8e-30

299) EcolC_2757
( YP_001725712.1 )

resolvase domain-containing protein

NC_010468
(Escherichia coli ATCC 8739)

1e-29

300) Dd1591_1818
( YP_003004148.1 )

Resolvase domain-containing protein

NC_012912
(Dickeya zeae Ech1591)

2e-29

301) Veis_5037
( YP_980134.1 )

resolvase domain-containing protein

NC_008771
(Verminephrobacter eiseniae EF01-2)

2e-29

302) hin
( YP_005398142.1 )

DNA-invertase hin

NC_017046
(Salmonella enterica 798)

2e-29

303) SN31241_38600
( YP_008361775.1 )

Min

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-29

304) ETEC_0311
( YP_006113901.1 )

putative pinE invertase/site-specific DNA recombinase

NC_017633
(Escherichia coli ETEC H10407)

3e-29

305) Emtol_0038
( YP_006870535.1 )

Resolvase domain-containing protein

NC_018744
(Emticicia oligotrophica DSM 17448)

3e-29

306) Emtol_0101
( YP_006875483.1 )

Resolvase domain-containing protein

NC_018749
(Emticicia oligotrophica DSM 17448)

3e-29

307) Sput200_3754
( YP_006011594.1 )

Resolvase domain-containing protein

NC_017566
(Shewanella putrefaciens 200)

3e-29

308) B479_27269
( YP_007232246.1 )

resolvase

NC_019906
(Pseudomonas putida PC9)

3e-29

309) pin
( YP_002398957.1 )

site-specific DNA recombinase; e14 prophage

NC_011745
(Escherichia coli ED1a)

4e-29

310) APECO78_04920
( YP_007380165.1 )

DNA-invertase

NC_020163
(Escherichia coli APEC O78)

4e-29

311) Glo7428_3143
( YP_007128790.1 )

Resolvase domain protein

NC_019745
(Gloeocapsa sp. PCC 7428)

4e-29

312) SSON53_15410
( YP_005457590.1 )

phage DNA invertase

NC_016822
(Shigella sonnei 53G)

4e-29

313) Sputcn32_0167
( YP_001181702.1 )

resolvase domain-containing protein

NC_009438
(Shewanella putrefaciens CN-32)

4e-29

314) Sputw3181_3209
( YP_964578.1 )

resolvase domain-containing protein

NC_008750
(Shewanella sp. W3-18-1)

4e-29

315) BCAH187_C0233
( YP_002335968.1 )

resolvase

NC_011655
(Bacillus cereus AH187)

4e-29

316) BCAH820_B0202
( YP_002455084.1 )

resolvase

NC_011777
(Bacillus cereus AH820)

4e-29

317) NE0257
( NP_840347.1 )

site-specific recombinase

NC_004757
(Nitrosomonas europaea ATCC 19718)

4e-29

318) RLO149_c018840
( YP_004690835.1 )

resolvase/recombinase

NC_015730
(Roseobacter litoralis Och 149)

5e-29

319) EKO11_2998
( YP_005278650.1 )

Resolvase domain-containing protein

NC_016902
(Escherichia coli KO11FL)

5e-29

320) KO11_19325
( YP_006166184.1 )

putative DNA invertase

NC_017660
(Escherichia coli KO11FL)

5e-29

321) LF82_387
( YP_002557462.1 )

DNA-invertase

NC_011993
(Escherichia coli LF82)

5e-29

322) pinE
( YP_006123693.1 )

site-specific DNA recombinase

NC_017635
(Escherichia coli W)

5e-29

323) WFL_04605
( YP_006172371.1 )

putative DNA invertase

NC_017664
(Escherichia coli W)

5e-29

324) STY2889
( NP_457172.1 )

putative DNA-invertase

NC_003198
(Salmonella enterica CT18)

5e-29

325) STY3695
( NP_457886.1 )

DNA-invertase

NC_003198
(Salmonella enterica CT18)

5e-29

326) t2667
( NP_806378.2 )

DNA-invertase

NC_004631
(Salmonella enterica Ty2)

5e-29

327) ECH74115_0302
( YP_002268882.1 )

DNA-invertase

NC_011353
(Escherichia coli EC4115)

5e-29

328) pinH
( NP_285972.1 )

DNA invertase from prophage CP-933H

NC_002655
(Escherichia coli EDL933)

5e-29

329) ECs0284
( NP_308311.1 )

DNA-invertase

NC_002695
(Escherichia coli Sakai)

5e-29

330) pinH
( YP_003076253.1 )

DNA invertase from prophage CP-933H

NC_013008
(Escherichia coli TW14359)

5e-29

331) CDCO157_0278
( YP_006311137.1 )

DNA-invertase

NC_017906
(Escherichia coli Xuzhou21)

5e-29

332) SG0709
( YP_454389.1 )

phage DNA-invertase

NC_007712
(Sodalis glossinidius morsitans)

5e-29

333) gin
( YP_003368142.1 )

phage DNA invertase

NC_013716
(Citrobacter rodentium ICC168)

5e-29

334) hin
( YP_002638348.1 )

DNA-invertase Hin

NC_012125
(Salmonella enterica RKS4594)

5e-29

335) plpp0052
( YP_122207.1 )

hypothetical protein

NC_006365
(Legionella pneumophila Paris)

6e-29

336) UMNK88_328
( YP_006132143.1 )

phage DNA-invertase

NC_017641
(Escherichia coli UMNK88)

6e-29

337) pin
( YP_407274.1 )

inversion of adjacent DNA; at locus of e14 element

NC_007613
(Shigella boydii Sb227)

6e-29

338) Rpic12D_5126
( YP_002973600.1 )

Resolvase domain protein

NC_012849
(Ralstonia pickettii 12D)

6e-29

339) STBHUCCB_36190
( YP_005219092.1 )

Min

NC_016832
(Salmonella enterica P-stx-12)

7e-29

340) pin
( NP_807099.1 )

DNA-invertase

NC_004631
(Salmonella enterica Ty2)

7e-29

341) PP1Y_Spl144
( YP_004537933.1 )

invertase/recombinase protein

NC_015582
(Novosphingobium sp. PP1Y)

7e-29

342) pinE
( YP_006143806.1 )

e14 prophage, site-specific DNA recombinase

NC_017646
(Escherichia coli CE10)

8e-29

343) MASS_0401
( YP_008020867.1 )

resolvase

NC_021282
(Mycobacterium abscessus 50594)

9e-29

344) D782_2458
( YP_007340609.1 )

site-specific recombinase, DNA invertase Pin

NC_020063
(Enterobacteriaceae bacterium FGI 57)

9e-29

345) BN406_00335
( YP_006839206.1 )

resolvase domain-containing protein

NC_018700
(Sinorhizobium meliloti Rm41)

9e-29

346) BcerKBAB4_5396
( YP_001642722.1 )

resolvase domain-containing protein

NC_010181
(Bacillus weihenstephanensis KBAB4)

9e-29

347) pinE
( YP_003500606.1 )

DNA invertase from prophage CP-933H

NC_013941
(Escherichia coli CB9615)

1e-28

348) STBHUCCB_28060
( YP_005218316.1 )

Min

NC_016832
(Salmonella enterica P-stx-12)

1e-28

349) TY21A_13505
( YP_007926952.1 )

putative DNA-invertase

NC_021176
(Salmonella enterica Ty21a)

1e-28

350) TY21A_17390
( YP_007927690.1 )

DNA-invertase

NC_021176
(Salmonella enterica Ty21a)

1e-28

351) MmarC7_0041
( YP_001329263.1 )

resolvase domain-containing protein

NC_009637
(Methanococcus maripaludis C7)

1e-28

352) Namu_5332
( YP_003204587.1 )

resolvase domain-containing protein

NC_013235
(Nakamurella multipartita DSM 44233)

1e-28

353) Strop_4137
( YP_001160944.1 )

resolvase domain-containing protein

NC_009380
(Salinispora tropica CNB-440)

1e-28

354) Maqu_0409
( YP_957699.1 )

resolvase domain-containing protein

NC_008740
(Marinobacter aquaeolei VT8)

2e-28

355) RLO149_c010810
( YP_004690051.1 )

bacteriophage DNA-invertase

NC_015730
(Roseobacter litoralis Och 149)

2e-28

356) SM11_chr0357
( YP_005718901.1 )

DNA-invertase

NC_017325
(Sinorhizobium meliloti SM11)

2e-28

357) M301_2190
( YP_003675135.1 )

Resolvase domain-containing protein

NC_014207
(Methylotenera versatilis 301)

3e-28

358) Celgi_0231
( YP_004599325.1 )

Resolvase domain protein

NC_015671
(Cellvibrio gilvus ATCC 13127)

4e-28

359) cgR_0135
( YP_001136999.1 )

hypothetical protein

NC_009342
(Corynebacterium glutamicum R)

4e-28

360) Dd586_1782
( YP_003333350.1 )

Resolvase domain-containing protein

NC_013592
(Dickeya dadantii Ech586)

4e-28

361) UMNK88_931
( YP_006132719.1 )

hypothetical protein

NC_017641
(Escherichia coli UMNK88)

5e-28

362) pin
( YP_003883333.1 )

DNA-invertase

NC_014500
(Dickeya dadantii 3937)

5e-28

363) Nwat_2408
( YP_003761549.1 )

resolvase domain-containing protein

NC_014315
(Nitrosococcus watsonii C-113)

5e-28

364) pin
( YP_006506382.1 )

site-specific DNA recombinase; e14 prophage

NC_018139
(Legionella pneumophila Lorraine)

5e-28

365) GYY_04310
( YP_004742480.1 )

resolvase domain-containing protein

NC_015847
(Methanococcus maripaludis X1)

6e-28

366) Zmob_1652
( YP_005621917.1 )

resolvase domain-containing protein

NC_017262
(Zymomonas mobilis ATCC 10988)

6e-28

367) ZZ6_1631
( YP_006519012.1 )

resolvase domain-containing protein

NC_018145
(Zymomonas mobilis ATCC 29191)

6e-28

368) ZMO1455
( YP_163190.1 )

resolvase domain-containing protein

NC_006526
(Zymomonas mobilis ZM4)

6e-28

369) CSSP291_01770
( YP_007439241.1 )

DNA-invertase

NC_020260
(Cronobacter sakazakii Sp291)

7e-28

370) MASS_1085
( YP_008021551.1 )

putative resolvase

NC_021282
(Mycobacterium abscessus 50594)

1e-27

371) Thivi_0196
( YP_006412392.1 )

site-specific recombinase, DNA invertase Pin

NC_018012
(Thiocystis violascens DSM 198)

1e-27

372) Thivi_1340
( YP_006413478.1 )

site-specific recombinase, DNA invertase Pin

NC_018012
(Thiocystis violascens DSM 198)

1e-27

373) Thivi_4374
( YP_006416304.1 )

site-specific recombinase, DNA invertase Pin

NC_018012
(Thiocystis violascens DSM 198)

1e-27

374) ARUE_232p00350
( YP_006664281.1 )

resolvase

NC_018532
(Arthrobacter sp. Rue61a)

1e-27

375) Sinme_6651
( YP_004557791.1 )

resolvase domain-containing protein

NC_015597
(Sinorhizobium meliloti AK83)

1e-27

376) AARI_08090
( YP_003916006.1 )

resolvase

NC_014550
(Arthrobacter arilaitensis Re117)

8e-28

377) PSPPH_B0057
( YP_272312.1 )

resolvase, putative

NC_007275
(Pseudomonas syringae 1448A)

8e-28

378) H924_13205
( YP_007599808.1 )

hypothetical protein

NC_020553
(Corynebacterium callunae DSM 20147)

8e-28

379) CtCNB1_3813
( YP_003279855.1 )

Resolvase-like protein

NC_013446
(Comamonas testosteroni CNB-1)

2e-27

380) inv
( YP_003364518.1 )

phage DNA invertase

NC_013716
(Citrobacter rodentium ICC168)

2e-27

381) CDBH8_0918
( YP_005160010.1 )

transposase-like protein

NC_016800
(Corynebacterium diphtheriae BH8)

2e-27

382) resP
( NP_987886.1 )

site-specific recombinase

NC_005791
(Methanococcus maripaludis S2)

2e-27

383) invA
( YP_006367683.1 )

DNA-invertase hin

NC_017955
(Modestobacter marinus BC501)

2e-27

384) D11S_2321
( YP_003966094.1 )

site-specific recombinase

NC_014629
(Aggregatibacter actinomycetemcomitans D11S-1)

2e-27

385) SAUSA300_pUSA030028
( YP_492714.1 )

resolvase

NC_007792
(Staphylococcus aureus FPR3757)

2e-27

386) SAI5S5_20220
( YP_007582606.1 )

Resolvase

NC_020535
(Staphylococcus aureus ST228)

2e-27

387) res
( NP_115306.1 )

putative resolvase

NC_002774
(Staphylococcus aureus Mu50)

2e-27

388) Arth_4386
( YP_829138.1 )

resolvase

NC_008537
(Arthrobacter sp. FB24)

3e-27

389) AZL_f00900
( YP_003453394.1 )

resolvase

NC_013860
(Azospirillum sp. B510)

3e-27

390) BN4_10636
( YP_007493024.1 )

hypothetical protein

NC_020409
(Desulfovibrio piezophilus C1TLV30)

3e-27

391) Arth_4459
( YP_829210.1 )

resolvase

NC_008537
(Arthrobacter sp. FB24)

3e-27

392) Arth_4290
( YP_829308.1 )

resolvase

NC_008538
(Arthrobacter sp. FB24)

3e-27

393) Arth_4190
( YP_829412.1 )

resolvase

NC_008539
(Arthrobacter sp. FB24)

3e-27

394) Ppro_3670
( YP_899515.1 )

resolvase domain-containing protein

NC_008607
(Pelobacter propionicus DSM 2379)

3e-27

395) tnpR2
( YP_006993221.1 )

resolvase, N terminal domain protein

NC_019425
(Carnobacterium maltaromaticum LMA28)

3e-27

396) Cfla_0348
( YP_003635464.1 )

resolvase domain-containing protein

NC_014151
(Cellulomonas flavigena DSM 20109)

4e-27

397) Paes_2392
( YP_002019735.1 )

resolvase

NC_011061
(Prosthecochloris aestuarii DSM 271)

4e-27

398) Maqu_4154
( YP_956922.1 )

resolvase domain-containing protein

NC_008738
(Marinobacter aquaeolei VT8)

4e-27

399) Paes_1093
( YP_002015774.1 )

resolvase domain

NC_011059
(Prosthecochloris aestuarii DSM 271)

4e-27

400) OA238_c45100
( YP_007701839.1 )

DNA integration/recombination/inversion protein

NC_020908
(Octadecabacter arcticus 238)

5e-27

401) pinE
( YP_003622597.1 )

DNA-invertase from lambdoid prophage e14

NC_014144
(Thiomonas sp. 3As)

5e-27

402) tnpR
( YP_005304261.1 )

transposon Tn21 resolvase

NC_016932
(Corynebacterium pseudotuberculosis 316)

6e-27

403) Maqu_0235
( YP_957528.1 )

resolvase domain-containing protein

NC_008740
(Marinobacter aquaeolei VT8)

1e-26

404) B479_27034
( YP_007232199.1 )

resolvase

NC_019906
(Pseudomonas putida PC9)

1e-26

405) resR2
( YP_006398532.1 )

transposon Tn552 DNA-invertase

NC_018000
(Sinorhizobium fredii USDA 257)

1e-26

406) res
( YP_245982.1 )

resolvase

NC_007105
(Bacillus cereus E33L)

7e-27

407) cgR_0159
( YP_001137023.1 )

hypothetical protein

NC_009342
(Corynebacterium glutamicum R)

7e-27

408) Cp258_1641
( YP_006353204.1 )

Resolvase

NC_017945
(Corynebacterium pseudotuberculosis 258)

7e-27

409) MmarC6_0014
( YP_001548072.1 )

resolvase domain-containing protein

NC_009975
(Methanococcus maripaludis C6)

8e-27

410) Za10_1737
( YP_003226855.1 )

resolvase

NC_013355
(Zymomonas mobilis NCIMB 11163)

8e-27

411) Krad_4707
( YP_001355396.1 )

resolvase domain-containing protein

NC_009660
(Kineococcus radiotolerans SRS30216)

9e-27

412) Noc_A0021
( YP_342064.1 )

resolvase-like protein

NC_007483
(Nitrosococcus oceani ATCC 19707)

1e-26

413) ECs4992
( NP_313019.1 )

DNA-invertase

NC_002695
(Escherichia coli Sakai)

2e-26

414) GLX_31570
( YP_004869610.1 )

DNA resolvase

NC_016028
(Gluconacetobacter xylinus NBRC 3288)

2e-26

415) SBI_04041
( YP_004962293.1 )

DNA invertase

NC_016582
(Streptomyces bingchenggensis BCW-1)

3e-26

416) pinE
( YP_003071354.1 )

e14 prophage; inversion of adjacent DNA

NC_012989
(Methylobacterium extorquens DM4)

3e-26

417) Mvol_0519
( YP_003707152.1 )

Resolvase domain-containing protein

NC_014222
(Methanococcus voltae A3)

5e-26

418) Mvol_0520
( YP_003707153.1 )

Resolvase domain-containing protein

NC_014222
(Methanococcus voltae A3)

1e-25

419) Shew_0991
( YP_001093121.1 )

resolvase domain-containing protein

NC_009092
(Shewanella loihica PV-4)

5e-26

420) Oant_4775
( YP_001373192.1 )

resolvase domain-containing protein

NC_009670
(Ochrobactrum anthropi ATCC 49188)

5e-26

421) Oant_4668
( YP_001373267.1 )

resolvase domain-containing protein

NC_009671
(Ochrobactrum anthropi ATCC 49188)

5e-26

422) Sulku_2622
( YP_004049829.1 )

Resolvase domain

NC_014754
(Sulfuricurvum kujiense DSM 16994)

6e-26

423) Sulku_2718
( YP_004049921.1 )

resolvase

NC_014755
(Sulfuricurvum kujiense DSM 16994)

6e-26

424) YBT020_29181
( YP_005563626.1 )

resolvase

NC_017199
(Bacillus thuringiensis YBT-020)

6e-26

425) Noc_0696
( YP_342740.1 )

resolvase-like protein

NC_007484
(Nitrosococcus oceani ATCC 19707)

7e-26

426) PGA2_c09000
( YP_006562157.1 )

resolvase

NC_018286
(Phaeobacter gallaeciensis 2.10)

7e-26

427) XFLM_12030
( YP_005999382.1 )

P25

NC_017561
(Xylella fastidiosa GB514)

9e-26

428) Kvar_2125
( YP_003439056.1 )

resolvase

NC_013850
(Klebsiella variicola At-22)

1e-25

429) Odosp_2993
( YP_004254141.1 )

Resolvase domain

NC_015160
(Odoribacter splanchnicus DSM 220712)

1e-25

430) Dd703_3045
( YP_002988640.1 )

resolvase

NC_012880
(Dickeya dadantii Ech703)

1e-25

431) Achl_0955
( YP_002487039.1 )

resolvase

NC_011886
(Arthrobacter chlorophenolicus A6)

1e-25

432) BTF1_19875
( YP_006612064.1 )

DNA integration/recombination/inversion protein

NC_018508
(Bacillus thuringiensis HD-789)

1e-25

433) B479_26924
( YP_007232177.1 )

Tn5501/Tn5503/Tn4662 resolvase

NC_019906
(Pseudomonas putida PC9)

2e-25

434) B479_27179
( YP_007232228.1 )

Tn5501/Tn5503/Tn4662 resolvase

NC_019906
(Pseudomonas putida PC9)

2e-25

435) ambt_17020
( YP_004468711.1 )

DNA-invertase

NC_015554
(Alteromonas sp. SN2)

3e-25

436) Arad_14069
( YP_002551254.1 )

resolvase

NC_011990
(Agrobacterium radiobacter K84)

3e-25

437) BYI23_E002780
( YP_004980226.1 )

resolvase

NC_016591
(Burkholderia sp. YI23)

3e-25

438) GLX_31540
( YP_004869607.1 )

DNA resolvase

NC_016028
(Gluconacetobacter xylinus NBRC 3288)

3e-25

439) tnpR
( NP_943127.1 )

Tn5501 resolvase

NC_005244
(Pseudomonas putida ND6)

3e-25

440) VAB18032_30359
( YP_004377783.1 )

resolvase domain-containing protein

NC_015409
(Verrucosispora maris AB-18-032)

3e-25

441) MEALZ_2136
( YP_004917414.1 )

site-specific DNA recombinase

NC_016112
(Methylomicrobium alcaliphilum 20Z)

3e-25

442) Mvol_1533
( YP_003708161.1 )

Resolvase domain-containing protein

NC_014222
(Methanococcus voltae A3)

4e-25

443) Ppha_1052
( YP_002017951.1 )

resolvase

NC_011060
(Pelodictyon phaeoclathratiforme BU-1)

4e-25

444) Slin_4835
( YP_003389612.1 )

resolvase

NC_013730
(Spirosoma linguale DSM 74)

4e-25

445) pinR
( YP_004522007.1 )

site-specific recombinase PinR

NC_015576
(Mycobacterium sp. JDM601)

5e-25

446) Sulku_2789
( YP_004049990.1 )

Resolvase domain

NC_014756
(Sulfuricurvum kujiense DSM 16994)

6e-25

447) Sputw3181_4073
( YP_965429.1 )

resolvase domain-containing protein

NC_008750
(Shewanella sp. W3-18-1)

7e-25

448) Psest_4383
( YP_007242480.1 )

site-specific recombinase, DNA invertase Pin

NC_019937
(Pseudomonas stutzeri RCH2)

7e-25

449) Neut_2538
( YP_743719.1 )

resolvase domain-containing protein

NC_008341
(Nitrosomonas eutropha C91)

1e-24

450) YBT020_28454
( YP_005569266.1 )

putative site-specific recombinase

NC_017201
(Bacillus thuringiensis YBT-020)

1e-24

451) Asphe3_41370
( YP_004243336.1 )

site-specific recombinase, DNA invertase Pin

NC_015146
(Arthrobacter phenanthrenivorans Sphe3)

8e-25

452) Sphch_4093
( YP_004556178.1 )

Resolvase domain-containing protein

NC_015595
(Sphingobium chlorophenolicum L-1)

9e-25

453) SLG_p_00470
( YP_004831167.1 )

resolvase

NC_015974
(Sphingobium sp. SYK-6)

9e-25

454) Avi_9833
( YP_002546498.1 )

Resolvase Protein

NC_011986
(Agrobacterium vitis S4)

2e-24

455) Alide_4456
( YP_004129037.1 )

resolvase domain protein

NC_014911
(Alicycliphilus denitrificans BC)

2e-24

456) YSA_03493
( YP_006385771.1 )

TniR protein

NC_017986
(Pseudomonas putida ND6)

3e-24

457) LAB52_07560
( YP_005854436.1 )

hypothetical protein

NC_017470
(Lactobacillus amylovorus GRL1118)

3e-24

458) AAur_0420
( YP_946228.1 )

resolvase family site-specific recombinase

NC_008711
(Arthrobacter aurescens TC1)

3e-24

459) ACMV_P4_00130
( YP_004285760.1 )

resolvase

NC_015188
(Acidiphilium multivorum AIU301)

3e-24

460) slr7049
( NP_942337.1 )

resolvase

NC_005230
(Synechocystis sp. PCC 6803)

4e-24

461) MYO_4470
( YP_007452987.1 )

resolvase

NC_020287
(Synechocystis sp. PCC 6803)

4e-24

462) GLX_31030
( YP_004857966.1 )

DNA resolvase

NC_016021
(Gluconacetobacter xylinus NBRC 3288)

4e-24

463) GLX_31450
( YP_004869598.1 )

DNA resolvase

NC_016028
(Gluconacetobacter xylinus NBRC 3288)

4e-24

464) tniR
( YP_004980230.1 )

TniR protein

NC_016591
(Burkholderia sp. YI23)

4e-24

465) PST_0227
( YP_001170776.1 )

TniR protein

NC_009434
(Pseudomonas stutzeri A1501)

4e-24

466) PT7_0587
( YP_004415751.1 )

TniR protein

NC_015458
(Pusillimonas sp. T7-7)

4e-24

467) Pnap_4991
( YP_973981.1 )

resolvase domain-containing protein

NC_008762
(Polaromonas naphthalenivorans CJ2)

5e-24

468) tnpR
( YP_003425840.1 )

resolvase serine resolvase family

NC_013791
(Bacillus pseudofirmus OF4)

5e-24

469) Alide_4638
( YP_004124083.1 )

Resolvase domain protein

NC_014908
(Alicycliphilus denitrificans BC)

5e-24

470) PSPA7_5339
( YP_001350670.1 )

DNA-invertase

NC_009656
(Pseudomonas aeruginosa PA7)

5e-24

471) VIBHAR_p08245
( YP_001436112.1 )

resolvase

NC_009777
(Vibrio campbellii ATCC BAA-1116)

5e-24

472) M892_28630
( YP_008530201.1 )

DNA invertase

NC_022271
(Vibrio campbellii ATCC BAA-1116)

5e-24

473) AB57_0286
( YP_002317695.1 )

resolvase IS26

NC_011586
(Acinetobacter baumannii AB0057)

6e-24

474) tnpR
( YP_001715329.1 )

resolvase

NC_010410
(Acinetobacter baumannii AYE)

6e-24

475) ABTJ_02585
( YP_006290475.1 )

site-specific recombinase, DNA invertase Pin

NC_017847
(Acinetobacter baumannii MDR-TJ)

6e-24

476) ABTW07_3871
( YP_005797119.1 )

resolvase IS26

NC_017387
(Acinetobacter baumannii TCDC-AB0715)

6e-24

477) M3Q_1516
( YP_006847839.1 )

site-specific recombinase, DNA invertase Pin

NC_018706
(Acinetobacter baumannii TYTH-1)

6e-24

478) L483_16460
( YP_008095071.1 )

DNA invertase

NC_021491
(Pseudomonas putida H8234)

6e-24

479) Psyr_2668
( YP_235745.1 )

helix-turn-helix, Fis-type

NC_007005
(Pseudomonas syringae B728a)

6e-24

480) SeHA_C1568
( YP_002045436.1 )

helix-turn-helix, Fis-type

NC_011083
(Salmonella enterica SL476)

6e-24

481) XCV2327
( YP_364058.1 )

resolvase

NC_007508
(Xanthomonas campestris 85-10)

6e-24

482) Pse7367_3725
( YP_007083387.1 )

Resolvase domain-containing protein

NC_019690
(Pseudanabaena sp. PCC 7367)

1e-23

483) mlr6326
( NP_106852.1 )

DNA invertase

NC_002678
(Mesorhizobium loti MAFF303099)

1e-23

484) AciPR4_0123
( YP_004180958.1 )

resolvase domain-containing protein

NC_014963
(Terriglobus saanensis SP1PR4)

1e-23

485) SJA_P2-00270
( YP_003543429.1 )

putative resolvase

NC_014005
(Sphingobium japonicum UT26S)

7e-24

486) NH44784_017531
( YP_008028847.1 )

COG1961: Site-specific recombinases, DNA invertase Pin homologs

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

7e-24

487) pEFER_0031
( YP_002394579.1 )

resolvase

NC_011743
(Escherichia fergusonii ATCC 35469)

7e-24

488) SSPP111
( YP_302547.1 )

putative site-specific recombinase

NC_007351
(Staphylococcus saprophyticus ATCC 15305)

8e-24

489) Alide_4496
( YP_004129074.1 )

resolvase domain protein

NC_014911
(Alicycliphilus denitrificans BC)

8e-24

490) Dsui_2500
( YP_005028694.1 )

site-specific recombinase, DNA invertase Pin

NC_016616
(Dechlorosoma suillum PS)

8e-24

491) ECL_A229
( YP_003602723.1 )

TniR protein

NC_014107
(Enterobacter cloacae ATCC 13047)

8e-24

492) ECL_03827
( YP_003614310.1 )

putative resolvase

NC_014121
(Enterobacter cloacae ATCC 13047)

8e-24

493) Tint_3212
( YP_003644866.1 )

Resolvase domain protein

NC_014154
(Thiomonas intermedia K12)

8e-24

494) lwe0782
( YP_848983.1 )

resolvase

NC_008555
(Listeria welshimeri SLCC5334)

8e-24

495) Bcep1808_7230
( YP_001109891.1 )

resolvase domain-containing protein

NC_009227
(Burkholderia vietnamiensis G4)

1e-23

496) ECL_01720
( YP_003612227.1 )

DNA-invertase

NC_014121
(Enterobacter cloacae ATCC 13047)

2e-23

497) AM1_H0028
( YP_001522692.1 )

resolvase domain-containing protein

NC_009933
(Acaryochloris marina MBIC11017)

2e-23

498) A225_R1p0410
( YP_006501694.1 )

Resolvase

NC_018107
(Klebsiella oxytoca E718)

2e-23

499) TM1040_1645
( YP_613640.1 )

resolvase-like protein

NC_008044
(Ruegeria sp. TM1040)

2e-23

500) Mycsm_06107
( YP_007295671.1 )

site-specific recombinase, DNA invertase Pin

NC_019966
(Mycobacterium smegmatis JS623)

3e-23

501) XNC1_p0130
( YP_003662409.1 )

Resolvase

NC_014170
(Xenorhabdus nematophila ATCC 19061)

4e-23

502) tniR
( YP_003038828.1 )

putative resolvase

NC_012961
(Photorhabdus asymbiotica ATCC 43949)

4e-23

503) tniR
( YP_001144375.1 )

TniR protein

NC_009350
(Aeromonas salmonicida A449)

5e-23

504) Ppro_3694
( YP_899538.1 )

resolvase domain-containing protein

NC_008607
(Pelobacter propionicus DSM 2379)

6e-23

505) GYY_02460
( YP_004742118.1 )

resolvase domain-containing protein

NC_015847
(Methanococcus maripaludis X1)

8e-23

506) Tmz1t_2111
( YP_002355747.1 )

resolvase

NC_011662
(Thauera sp. MZ1T)

8e-23

507) Tint_3239
( YP_003644889.1 )

Resolvase domain protein

NC_014154
(Thiomonas intermedia K12)

8e-23

508) Tint_3259
( YP_003644908.1 )

resolvase

NC_014155
(Thiomonas intermedia K12)

8e-23

509) tniR
( YP_585149.1 )

serine-based site-specific recombinase activity (resolvase) (Tn6048)

NC_007973
(Cupriavidus metallidurans CH34)

8e-23

510) tniR
( YP_586179.1 )

resolvase

NC_007974
(Cupriavidus metallidurans CH34)

8e-23

511) tniR
( YP_587106.1 )

resolvase

NC_007974
(Cupriavidus metallidurans CH34)

8e-23

512) KPN_pKPN5p08178
( YP_001338788.1 )

putative resolvase

NC_009651
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

8e-23

513) A284_12147
( YP_007443095.1 )

putative site-specific recombinase

NC_020266
(Staphylococcus warneri SG1)

2e-22

514) Haur_5190
( YP_001547945.1 )

resolvase domain-containing protein

NC_009973
(Herpetosiphon aurantiacus DSM 785)

2e-22

515) Terro_3079
( YP_006422646.1 )

site-specific recombinase, DNA invertase Pin

NC_018014
(Terriglobus roseus DSM 18391)

1e-22

516) CVAR_1346
( YP_004759775.1 )

DNA invertase

NC_015859
(Corynebacterium variabile DSM 44702)

2e-22

517) Celgi_2802
( YP_004601865.1 )

Resolvase domain protein

NC_015671
(Cellvibrio gilvus ATCC 13127)

2e-22

518) pin
( YP_005041195.1 )

site-specific DNA recombinase, ISAli20, Tn3 family

NC_016624
(Azospirillum lipoferum 4B)

4e-22

519) Tmz1t_2347
( YP_002364177.1 )

Resolvase domain protein

NC_011667
(Thauera sp. MZ1T)

5e-22

520) pnf2460
( YP_122095.1 )

putative resolvase

NC_006363
(Nocardia farcinica IFM 10152)

6e-22

521) BCQ_PI072
( YP_002533249.1 )

resolvase

NC_011973
(Bacillus cereus Q1)

7e-22

522) AARI_30520
( YP_003918224.1 )

resolvase

NC_014550
(Arthrobacter arilaitensis Re117)

8e-22

523) Deipe_4426
( YP_007174204.1 )

site-specific recombinase, DNA invertase Pin

NC_019790
(Deinococcus peraridilitoris DSM 19664)

1e-21

524) JCM7686_pAMI1p052
( YP_008406395.1 )

resolvase

NC_022042
(Paracoccus aminophilus JCM 7686)

1e-21

525) JCM7686_pAMI8p166
( YP_008408550.1 )

transposon Tn3434a resolvase

NC_022050
(Paracoccus aminophilus JCM 7686)

1e-21

526) JCM7686_pAMI8p184
( YP_008408568.1 )

transposon Tn3434a resolvase

NC_022050
(Paracoccus aminophilus JCM 7686)

1e-21

527) AMBLS11_01125
( YP_006823274.1 )

DNA-invertase

NC_018692
(Alteromonas macleodii Black Sea 11)

1e-21

528) XNC1_1750
( YP_003711996.1 )

DNA-invertase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

1e-21

529) Dshi_3683
( YP_001541897.1 )

resolvase domain-containing protein

NC_009955
(Dinoroseobacter shibae DFL 12)

2e-21

530) pinR
( YP_001848908.1 )

site-specific recombinase PinR

NC_010612
(Mycobacterium marinum M)

2e-21

531) D11S_2299
( YP_003264506.1 )

resolvase/integrase-like protein

NC_013438
(Aggregatibacter actinomycetemcomitans D11S-1)

5e-21

532) OBV_34630
( YP_004883167.1 )

putative site-specific recombinase

NC_016048
(Oscillibacter valericigenes Sjm18-20)

5e-21

533) Ethha_0111
( YP_004090432.1 )

Resolvase domain

NC_014828
(Ethanoligenens harbinense YUAN-3)

6e-21

534) Ethha_0478
( YP_004090794.1 )

Resolvase domain

NC_014828
(Ethanoligenens harbinense YUAN-3)

6e-21

535) SGR_2539
( YP_001824051.1 )

DNA invertase

NC_010572
(Streptomyces griseus NBRC 13350)

8e-21

536) MAB_p04c
( YP_001700702.1 )

Putative resolvase/invertase/recombinase

NC_010394
(Mycobacterium abscessus ATCC 19977)

8e-21

537) AAur_pTC10225
( YP_950094.1 )

resolvase domain-containing protein

NC_008712
(Arthrobacter aurescens TC1)

8e-21

538) KPR_3326
( YP_007992302.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

9e-21

539) DPPB96
( YP_066950.1 )

transposition resolvase

NC_006139
(Desulfotalea psychrophila LSv54)

2e-20

540) B2K_02710
( YP_006187410.1 )

resolvase

NC_017672
(Paenibacillus mucilaginosus K02)

5e-20

541) MMAR_p15
( YP_001840842.1 )

site-specific DNA recombinase

NC_010604
(Mycobacterium marinum M)

5e-20

542) MLP_44250
( YP_004574842.1 )

site-specific recombinase

NC_015635
(Microlunatus phosphovorus NM-1)

6e-20

543) Oant_4606
( YP_001373122.1 )

resolvase domain-containing protein

NC_009669
(Ochrobactrum anthropi ATCC 49188)

7e-20

544) ACMV_P1_00880
( YP_004277026.1 )

putative recombinase

NC_015178
(Acidiphilium multivorum AIU301)

1e-19

545) KPR_2781
( YP_007991760.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

2e-19

546) GDI_3875
( YP_001600262.1 )

putative DNA recombinase

NC_010124
(Gluconacetobacter diazotrophicus PAl 5)

2e-19

547) AZOLI_p30410
( YP_005040911.1 )

site-specific DNA recombinase

NC_016623
(Azospirillum lipoferum 4B)

2e-19

548) SAAV_c04
( YP_003283629.1 )

putative resolvase

NC_013453
(Staphylococcus aureus ED98)

2e-19

549) MAB_1820c
( YP_001702558.1 )

Putative resolvase

NC_010397
(Mycobacterium abscessus ATCC 19977)

3e-19

550) tnpR
( YP_006520703.1 )

transposon resolvase

NC_018150
(Mycobacterium abscessus GO 06)

3e-19

551) MPD5_0180
( YP_005318981.1 )

DNA-invertase

NC_016938
(Melissococcus plutonius DAT561)

1e-17

552) MPTP_0191
( YP_004455499.1 )

DNA-invertase

NC_015516
(Melissococcus plutonius ATCC 35311)

1e-17

553) PAC1_03945
( YP_006850784.1 )

resolvase

NC_018707
(Propionibacterium acnes C1)

1e-17

554) gin
( YP_004985749.1 )

DNA-invertase

NC_016594
(Azospirillum brasilense Sp245)

2e-17

555) Arth_4319
( YP_829337.1 )

resolvase-like protein

NC_008538
(Arthrobacter sp. FB24)

5e-17

556) Dtpsy_0846
( YP_002552324.1 )

resolvase domain-containing protein

NC_011992
(Acidovorax ebreus TPSY)

6e-17

557) Pnap_3928
( YP_984145.1 )

resolvase domain-containing protein

NC_008781
(Polaromonas naphthalenivorans CJ2)

3e-16

558) AZOBR_p430011
( YP_004987017.1 )

putative DNA-invertase from bacteriophage

NC_016596
(Azospirillum brasilense Sp245)

4e-14

559) ACMV_P3_00090
( YP_004277231.1 )

putative resolvase

NC_015179
(Acidiphilium multivorum AIU301)

8e-13

560) Acry_3562
( YP_001220302.1 )

resolvase domain-containing protein

NC_009470
(Acidiphilium cryptum JF-5)

1e-12

• Sequence Alignments

1) binR in NC_007168


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  250 bits (933),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 192/192 (100%), Positives = 192/192 (100%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLNNQENKDK  192
            LNKLNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

2) SH1761 in NC_007168


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  241 bits (898),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 182/189 (97%), Positives = 188/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

3) binL in NC_007168


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  241 bits (898),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 182/189 (97%), Positives = 188/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

4) resR in NC_016942


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  240 bits (895),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 184/192 (96%), Positives = 189/192 (99%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNQYGCEKIFSDHISGAKSKRPGLDRAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN  GCEKIF+DH+SG+KSKRPGLD+AIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMADLITLVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNM DLITLVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLNNQENKDK  192
            LNKLNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

5) SAAG_03516 in NC_022126


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  239 bits (891),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 183/192 (96%), Positives = 189/192 (99%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNQYGCEKIFSDHISGAKSKRPGLDRAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN  GCEKIF+DH+SG+KSKRPGLD+AIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMADLITLVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNM DLITLVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLNNQENKDK  192
            LNKLNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

6) EFAU004_p1057 in NC_017032


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  237 bits (884),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 154/192 (81%), Positives = 178/192 (93%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGLQNLDLQEDSLNKFGCEKIFTDHMSGAKSNRPGLEMAIDFVRSGDTLVV  60
            MKIGYARVSTGLQNL+LQED LN  GCEKIF DHMSG+KS+RPGL+ AI+F RSGDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLISIVNRLNERGVSFHSIQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI++VN LNERGVSFHS++ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErsaagraaarargrfggrPEKLSEQDLELLKTLVDSGTPIKTIAERWNVSRTTIYRY  180
            ILERS+AGR AARARGR+GGRPEKL+ +DL LLKTL D+GTPIKTIAE+W+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LAKMEEKNGKTN  192
            L K+++++ K +
Sbjct  181  LNKLNNQENKDK  192

7) hin in NC_021987


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  237 bits (884),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 154/192 (81%), Positives = 178/192 (93%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGLQNLDLQEDSLNKFGCEKIFTDHMSGAKSNRPGLEMAIDFVRSGDTLVV  60
            MKIGYARVSTGLQNL+LQED LN  GCEKIF DHMSG+KS+RPGL+ AI+F RSGDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLISIVNRLNERGVSFHSIQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI++VN LNERGVSFHS++ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErsaagraaarargrfggrPEKLSEQDLELLKTLVDSGTPIKTIAERWNVSRTTIYRY  180
            ILERS+AGR AARARGR+GGRPEKL+ +DL LLKTL D+GTPIKTIAE+W+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LAKMEEKNGKTN  192
            L K+++++ K +
Sbjct  181  LNKLNNQENKDK  192

8) EFAU085_p2071 in NC_021995


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  236 bits (879),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 153/192 (80%), Positives = 178/192 (93%), Gaps = 0/192 (0%)

Query  4    LKIGYARVSTGLQNLDLQEDSLNKFGCEKIFTDHMSGAKSNRPGLEMAIDFVRSGDTLVV  63
            +KIGYARVSTGLQNL+LQED LN  GCEKIF DHMSG+KS+RPGL+ AI+F RSGDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  64   WRLDRLGRNMEDLISIVNRLNERGVSFHSIQENITMDKSSSTGQLMFHLFAAFAEFERNL  123
            WRLDRLGRNMEDLI++VN LNERGVSFHS++ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  124  ILErsaagraaarargrfggrPEKLSEQDLELLKTLVDSGTPIKTIAERWNVSRTTIYRY  183
            ILERS+AGR AARARGR+GGRPEKL+ +DL LLKTL D+GTPIKTIAE+W+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  184  LAKMEEKNGKTN  195
            L K+++++ K +
Sbjct  181  LNKLNNQENKDK  192

9) CA347_2800 in NC_021552


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 180/189 (96%), Positives = 186/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNT GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWHVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

10) binL in NC_017339


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 180/189 (96%), Positives = 186/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNT GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWHVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

11) tnpR in NC_005951


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 180/189 (96%), Positives = 186/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNT GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWHVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

12) binL in NC_003140


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 180/189 (96%), Positives = 186/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNT GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWHVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

13) binL in NC_017345


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 180/189 (96%), Positives = 186/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNT GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWHVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

14) SLGD_00885 in NC_013893


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 180/189 (96%), Positives = 186/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNT GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWHVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

15) SLGD_01662 in NC_013893


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 180/189 (96%), Positives = 186/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNT GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWHVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

16) SPSINT_1864 in NC_014925


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 180/189 (96%), Positives = 186/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNT GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWHVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

17) SAR0719 in NC_002952


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  234 bits (873),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 179/187 (96%), Positives = 185/187 (99%), Gaps = 0/187 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDE  187
            LNKL+++
Sbjct  181  LNKLNNQ  187

18) MS7_0042 in NC_017351


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  234 bits (871),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 177/189 (94%), Positives = 187/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIF+DH+SGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEEKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

19) SAAG_00704 in NC_022113


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  234 bits (871),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 177/189 (94%), Positives = 187/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIF+DH+SGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEEKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

20) tnpR in NC_021670


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  234 bits (871),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 177/189 (94%), Positives = 187/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIF+DH+SGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEEKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

21) SABB_05219 in NC_021670


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  234 bits (871),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 177/189 (94%), Positives = 187/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIF+DH+SGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEEKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

22) binL in NC_017341


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  234 bits (871),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 177/189 (94%), Positives = 187/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIF+DH+SGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEEKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

23) tnpR in NC_002952


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  234 bits (871),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 177/189 (94%), Positives = 187/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIF+DH+SGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEEKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

24) SAT0131_02800 in NC_017347


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  234 bits (871),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 177/189 (94%), Positives = 187/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIF+DH+SGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEEKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

25) SPSE_2390 in NC_017568


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  234 bits (871),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 177/189 (94%), Positives = 187/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIF+DH+SGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEEKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

26) tnpR in NC_017331


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  233 bits (868),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 176/189 (94%), Positives = 186/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKVIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIF+DH+SGSKSKRPGLDK IEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEEKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

27) tnpR in NC_017352


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  233 bits (868),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 176/189 (94%), Positives = 186/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKVIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLN+ GCEKIF+DH+SGSKSKRPGLDK IEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNQKDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLN++DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEEKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

28) pli0056 in NC_003383


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  233 bits (868),  Expect = 8e-63, Method: Compositional matrix adjust.
 Identities = 149/183 (82%), Positives = 170/183 (93%), Gaps = 0/183 (0%)

Query  1    MKIGYARVSTGLQNLDLQVDSLEKHGCEKIFHDHISGAKSKRPGLEAAIDFCRSGDTIVV  60
            MKIGYARVSTGLQNL+LQ D L+ HGCEKIF+DH+SG+KSKRPGL+ AI+F RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLIRVVNQLNNNGISFHSLQENITMNKSSSTGQLIFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI +VN+LN+ G+SFHSL+ENITM+KSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILERSaagreaarargrfggrPEKLTAEDLALMRTLIDNGTPIKTIAARWNVSRTTIYRY  180
            ILERS+AGR AARARGR+GGRPEKL   DL+L++TL DNGTPIKTIA +W+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNK  183
            LNK
Sbjct  181  LNK  183

29) LMOSLCC2755_p0032 in NC_014495


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  231 bits (863),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 149/183 (82%), Positives = 170/183 (93%), Gaps = 0/183 (0%)

Query  1    MKIGYARVSTGLQNLDLQIDSLEKDGCEKIFQDHISGAKSKRPGLDAAIDFCRSGDTIVV  60
            MKIGYARVSTGLQNL+LQ D L+ +GCEKIF+DH+SG+KSKRPGLD AI+F RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLIRVVNQLNDNGISFHSLQENITMNKSSSTGQLIFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI +VN+LN+ G+SFHSL+ENITM+KSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILERSaagreaarargrfggrPEKLTAEDLALMRTLIDNGTPIKTIAARWNVSRTTIYRY  180
            ILERS+AGR AARARGR+GGRPEKL   DL+L++TL DNGTPIKTIA +W+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNK  183
            LNK
Sbjct  181  LNK  183

30) LMOSLCC2482_p0024 in NC_018888


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  231 bits (863),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 149/183 (82%), Positives = 170/183 (93%), Gaps = 0/183 (0%)

Query  1    MKIGYARVSTGLQNLDLQIDSLEKDGCEKIFQDHISGAKSKRPGLDAAIDFCRSGDTIVV  60
            MKIGYARVSTGLQNL+LQ D L+ +GCEKIF+DH+SG+KSKRPGLD AI+F RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLIRVVNQLNDNGISFHSLQENITMNKSSSTGQLIFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI +VN+LN+ G+SFHSL+ENITM+KSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILERSaagreaarargrfggrPEKLTAEDLALMRTLIDNGTPIKTIAARWNVSRTTIYRY  180
            ILERS+AGR AARARGR+GGRPEKL   DL+L++TL DNGTPIKTIA +W+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNK  183
            LNK
Sbjct  181  LNK  183

31) LMOSLCC2372_p0024 in NC_018889


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  231 bits (863),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 149/183 (82%), Positives = 170/183 (93%), Gaps = 0/183 (0%)

Query  1    MKIGYARVSTGLQNLDLQIDSLEKDGCEKIFQDHISGAKSKRPGLDAAIDFCRSGDTIVV  60
            MKIGYARVSTGLQNL+LQ D L+ +GCEKIF+DH+SG+KSKRPGLD AI+F RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLIRVVNQLNDNGISFHSLQENITMNKSSSTGQLIFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI +VN+LN+ G+SFHSL+ENITM+KSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILERSaagreaarargrfggrPEKLTAEDLALMRTLIDNGTPIKTIAARWNVSRTTIYRY  180
            ILERS+AGR AARARGR+GGRPEKL   DL+L++TL DNGTPIKTIA +W+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNK  183
            LNK
Sbjct  181  LNK  183

32) M641_15695 in NC_021828


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  231 bits (863),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 149/183 (82%), Positives = 170/183 (93%), Gaps = 0/183 (0%)

Query  1    MKIGYARVSTGLQNLDLQIDSLEKDGCEKIFQDHISGAKSKRPGLDAAIDFCRSGDTIVV  60
            MKIGYARVSTGLQNL+LQ D L+ +GCEKIF+DH+SG+KSKRPGLD AI+F RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLIRVVNQLNDNGISFHSLQENITMNKSSSTGQLIFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI +VN+LN+ G+SFHSL+ENITM+KSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILERSaagreaarargrfggrPEKLTAEDLALMRTLIDNGTPIKTIAARWNVSRTTIYRY  180
            ILERS+AGR AARARGR+GGRPEKL   DL+L++TL DNGTPIKTIA +W+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNK  183
            LNK
Sbjct  181  LNK  183

33) M643_p00310 in NC_022045


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  230 bits (859),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 148/183 (81%), Positives = 170/183 (93%), Gaps = 0/183 (0%)

Query  6    LKIGYARVSTGLQNLDLQIDSLEKDGCEKIFQDHISGAKSKRPGLDAAIDFCRSGDTIVV  65
            +KIGYARVSTGLQNL+LQ D L+ +GCEKIF+DH+SG+KSKRPGLD AI+F RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  66   WRLDRLGRNMEDLIRVVNQLNDNGISFHSLQENITMNKSSSTGQLIFHLFAAFAEFERNL  125
            WRLDRLGRNMEDLI +VN+LN+ G+SFHSL+ENITM+KSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  126  ILERSaagreaarargrfggrPEKLTAEDLALMRTLIDNGTPIKTIAARWNVSRTTIYRY  185
            ILERS+AGR AARARGR+GGRPEKL   DL+L++TL DNGTPIKTIA +W+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  186  LNK  188
            LNK
Sbjct  181  LNK  183

34) LM5578_p78 in NC_013767


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  230 bits (859),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 148/183 (81%), Positives = 170/183 (93%), Gaps = 0/183 (0%)

Query  6    LKIGYARVSTGLQNLDLQIDSLEKDGCEKIFQDHISGAKSKRPGLDAAIDFCRSGDTIVV  65
            +KIGYARVSTGLQNL+LQ D L+ +GCEKIF+DH+SG+KSKRPGLD AI+F RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  66   WRLDRLGRNMEDLIRVVNQLNDNGISFHSLQENITMNKSSSTGQLIFHLFAAFAEFERNL  125
            WRLDRLGRNMEDLI +VN+LN+ G+SFHSL+ENITM+KSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  126  ILERSaagreaarargrfggrPEKLTAEDLALMRTLIDNGTPIKTIAARWNVSRTTIYRY  185
            ILERS+AGR AARARGR+GGRPEKL   DL+L++TL DNGTPIKTIA +W+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  186  LNK  188
            LNK
Sbjct  181  LNK  183

35) USA300HOU_pUSA300HOUMR0014 in NC_010063


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  227 bits (845),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 176/180 (98%), Positives = 178/180 (99%), Gaps = 0/180 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNT GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

36) SEA0006 in NC_006663


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  227 bits (845),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 176/180 (98%), Positives = 178/180 (99%), Gaps = 0/180 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNT GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLNLLKTLYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

37) ECTR2_2588 in NC_017344


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  218 bits (812),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 184/192 (96%), Positives = 188/192 (98%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGlqnldlqedqlnqYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNL+LQED+LN  GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLIILVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLI LVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLNNQENKDK  192
            LNKLNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

38) BN843_p60 in NC_021060


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  218 bits (812),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 184/192 (96%), Positives = 188/192 (98%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGlqnldlqedqlnqYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNL+LQED+LN  GCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLIILVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLI LVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLNNQENKDK  192
            LNKLNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

39) uc509_p5009 in NC_019432


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  218 bits (811),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 145/184 (79%), Positives = 167/184 (91%), Gaps = 0/184 (0%)

Query  1    MNIGYARVSTGLQNLDLQKDSLKKYDCEKIFTDHMSGSKKERPGLKSAIEFSRSGDTIVV  60
            M+IGYARVSTGLQNL+LQ D L+  +CEKIF DHMSGSK  RPGL  AIEF+RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLISIVNSLNDKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI++VN LN++GVSFHSL+ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IlersaagreaarargrlggrPEKFSEQDVKLLKTLVESGTPIKSIADSWGVSRTTIYRY  180
            ILERS+AGR AARARGR GGRPEK++ +D+ LLKTL ++GTPIK+IA+ W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  INKF  184
            +NK+
Sbjct  181  LNKL  184

40) SaurJH1_2823 in NC_009619


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  218 bits (810),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 181/189 (96%), Positives = 188/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEklkkkdlnllktlYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKL+K+DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

41) SaurJH9_2746 in NC_009477


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  218 bits (810),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 181/189 (96%), Positives = 188/189 (99%), Gaps = 0/189 (0%)

Query  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60
            MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEklkkkdlnllktlYDNGTPIKTIAEQWQVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKL+K+DL LLKTLYDNGTPIKTIAEQW+VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNKLEDKED  189
            LNKL+++E+
Sbjct  181  LNKLNNQEN  189

42) LLKF_p0016 in NC_013657


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  218 bits (810),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 143/184 (78%), Positives = 165/184 (90%), Gaps = 0/184 (0%)

Query  1    MNIGYARVSTGLQNLDLQKDSLEKYNCEKIFTDHMSGSKKERPGLKSAVEFSRPGDTIVV  60
            M+IGYARVSTGLQNL+LQ D L+   CEKIF DHMSGSK  RPGL  A+EF+R+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLINIVNSLNNKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI +VN LN++GVSFHSL+ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IlersaagreaarargrlggrPEKFSEQDIKLLKTLVESGTPIKSIADSWGVSRTTIYRY  180
            ILERS+AGR AARARGR GGRPEK++ +D+ LLKTL ++GTPIK+IA+ W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  INKF  184
            +NK+
Sbjct  181  LNKL  184

43) ENT_30330 in NC_021023


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  217 bits (808),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 144/184 (79%), Positives = 167/184 (91%), Gaps = 0/184 (0%)

Query  1    MNIGYARVSTGLQNLDLQKDSLKKYDCEKIFTDHLSGSKKDRPGLKSAIEFSRSGDTIVV  60
            M+IGYARVSTGLQNL+LQ D L+  +CEKIF DH+SGSK  RPGL  AIEF+RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLISIVNSLNDKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI++VN LN++GVSFHSL+ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IlersaagreaarargrlggrPEKFSEQDVKLLKTLVESGTPIKSIADSWGVSRTTIYRY  180
            ILERS+AGR AARARGR GGRPEK++ +D+ LLKTL ++GTPIK+IA+ W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  INKF  184
            +NK+
Sbjct  181  LNKL  184

44) int in NC_017493


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  217 bits (808),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 144/184 (79%), Positives = 167/184 (91%), Gaps = 0/184 (0%)

Query  1    MNIGYARVSTGLQNLDLQKDSLKKYDCEKIFTDHLSGSKKDRPGLKSAIEFSRSGDTIVV  60
            M+IGYARVSTGLQNL+LQ D L+  +CEKIF DH+SGSK  RPGL  AIEF+RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLISIVNSLNDKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI++VN LN++GVSFHSL+ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IlersaagreaarargrlggrPEKFSEQDVKLLKTLVESGTPIKSIADSWGVSRTTIYRY  180
            ILERS+AGR AARARGR GGRPEK++ +D+ LLKTL ++GTPIK+IA+ W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  INKF  184
            +NK+
Sbjct  181  LNKL  184

45) LACR_D15 in NC_008506


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  217 bits (808),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 144/184 (79%), Positives = 167/184 (91%), Gaps = 0/184 (0%)

Query  1    MNIGYARVSTGLQNLDLQKDSLKKYDCEKIFTDHLSGSKKDRPGLKSAIEFSRSGDTIVV  60
            M+IGYARVSTGLQNL+LQ D L+  +CEKIF DH+SGSK  RPGL  AIEF+RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLISIVNSLNDKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI++VN LN++GVSFHSL+ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IlersaagreaarargrlggrPEKFSEQDVKLLKTLVESGTPIKSIADSWGVSRTTIYRY  180
            ILERS+AGR AARARGR GGRPEK++ +D+ LLKTL ++GTPIK+IA+ W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  INKF  184
            +NK+
Sbjct  181  LNKL  184

46) tnpR in NC_009004


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  217 bits (807),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 144/184 (79%), Positives = 165/184 (90%), Gaps = 0/184 (0%)

Query  1    MNIGYARVSTGLQNLDLQKDSLKKYNCEKIFTDHMSGSKRERPGLKSAIEFSRPGDTIVV  60
            M+IGYARVSTGLQNL+LQ D L+   CEKIF DHMSGSK  RPGL  AIEF+R+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLINIVNSLNNKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI +VN LN++GVSFHSL+ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IlersaagreaarargrlggrPEKFSEQDVKLLKTLVESGTPIKSIADSWGVSRTTIYRY  180
            ILERS+AGR AARARGR GGRPEK++ +D+ LLKTL ++GTPIK+IA+ W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  INKF  184
            +NK+
Sbjct  181  LNKL  184

47) LLNZ_03700 in NC_017949


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  217 bits (807),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 144/184 (79%), Positives = 165/184 (90%), Gaps = 0/184 (0%)

Query  1    MNIGYARVSTGLQNLDLQKDSLKKYNCEKIFTDHMSGSKRERPGLKSAIEFSRPGDTIVV  60
            M+IGYARVSTGLQNL+LQ D L+   CEKIF DHMSGSK  RPGL  AIEF+R+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLINIVNSLNNKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI +VN LN++GVSFHSL+ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IlersaagreaarargrlggrPEKFSEQDVKLLKTLVESGTPIKSIADSWGVSRTTIYRY  180
            ILERS+AGR AARARGR GGRPEK++ +D+ LLKTL ++GTPIK+IA+ W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  INKF  184
            +NK+
Sbjct  181  LNKL  184

48) tnpR in NC_017483


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  217 bits (807),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 144/184 (79%), Positives = 166/184 (91%), Gaps = 0/184 (0%)

Query  1    MNIGYARVSTGLQNLDLQKDSLKKYDCEKIFTDHMSGSKRERPGLKSAIEFSRPGDTIVV  60
            M+IGYARVSTGLQNL+LQ D L+  +CEKIF DHMSGSK  RPGL  AIEF+R+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLINIVNSLNNKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI +VN LN++GVSFHSL+ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IlersaagreaarargrlggrPEKFSEQDVKLLKTLVESGTPIKSIADSWGVSRTTIYRY  180
            ILERS+AGR AARARGR GGRPEK++ +D+ LLKTL ++GTPIK+IA+ W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  INKF  184
            +NK+
Sbjct  181  LNKL  184

49) Sinf_1973 in NC_016837


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  217 bits (807),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 143/184 (78%), Positives = 165/184 (90%), Gaps = 0/184 (0%)

Query  1    MNIGYARVSTGVQNLDLQKDSLKKYNCEKIFTDHMSGSKKERPGLKSAIEFSRSGDTIVV  60
            M+IGYARVSTG+QNL+LQ D L+   CEKIF DHMSGSK  RPGL  AIEF+RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLISIVNSLNDKGVSFHSLQENITMDKSSSNGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI++VN LN++GVSFHSL+ENITMDKSSS GQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IlersaagreaarargrlggrPEKFSEQDVKLLKTLVESGTPIKSIADSWGVSRTTIYRY  180
            ILERS+AGR AARARGR GGRPEK++ +D+ LLKTL ++GTPIK+IA+ W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  INKF  184
            +NK+
Sbjct  181  LNKL  184

50) MS7_2726 in NC_017350


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 182/192 (95%), Positives = 189/192 (99%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGlqnlnlqedqlnqYGCEKIFSDHISGSKSKRPGLDKAIEFARAGDTIVV  60
            MKIGYARVSTGLQNLNLQED+LN  GCEKIF+DH+SGSKSKRPGLDKAIEFAR+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNRLNNQENKDK  192
            LN+LNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

51) binR in NC_020530


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 182/192 (95%), Positives = 189/192 (99%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGlqnlnlqedqlnqYGCEKIFSDHISGSKSKRPGLDKAIEFARAGDTIVV  60
            MKIGYARVSTGLQNLNLQED+LN  GCEKIF+DH+SGSKSKRPGLDKAIEFAR+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNRLNNQENKDK  192
            LN+LNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

52) binR in NC_020531


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 182/192 (95%), Positives = 189/192 (99%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGlqnlnlqedqlnqYGCEKIFSDHISGSKSKRPGLDKAIEFARAGDTIVV  60
            MKIGYARVSTGLQNLNLQED+LN  GCEKIF+DH+SGSKSKRPGLDKAIEFAR+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNRLNNQENKDK  192
            LN+LNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

53) binR in NC_020565


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 182/192 (95%), Positives = 189/192 (99%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGlqnlnlqedqlnqYGCEKIFSDHISGSKSKRPGLDKAIEFARAGDTIVV  60
            MKIGYARVSTGLQNLNLQED+LN  GCEKIF+DH+SGSKSKRPGLDKAIEFAR+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNRLNNQENKDK  192
            LN+LNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

54) binR in NC_020534


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 182/192 (95%), Positives = 189/192 (99%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGlqnlnlqedqlnqYGCEKIFSDHISGSKSKRPGLDKAIEFARAGDTIVV  60
            MKIGYARVSTGLQNLNLQED+LN  GCEKIF+DH+SGSKSKRPGLDKAIEFAR+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNRLNNQENKDK  192
            LN+LNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

55) binR in NC_020538


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 182/192 (95%), Positives = 189/192 (99%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGlqnlnlqedqlnqYGCEKIFSDHISGSKSKRPGLDKAIEFARAGDTIVV  60
            MKIGYARVSTGLQNLNLQED+LN  GCEKIF+DH+SGSKSKRPGLDKAIEFAR+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNRLNNQENKDK  192
            LN+LNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

56) binR in NC_020567


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 182/192 (95%), Positives = 189/192 (99%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGlqnlnlqedqlnqYGCEKIFSDHISGSKSKRPGLDKAIEFARAGDTIVV  60
            MKIGYARVSTGLQNLNLQED+LN  GCEKIF+DH+SGSKSKRPGLDKAIEFAR+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNRLNNQENKDK  192
            LN+LNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

57) binR in NC_020539


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 182/192 (95%), Positives = 189/192 (99%), Gaps = 0/192 (0%)

Query  1    MKIGYARVSTGlqnlnlqedqlnqYGCEKIFSDHISGSKSKRPGLDKAIEFARAGDTIVV  60
            MKIGYARVSTGLQNLNLQED+LN  GCEKIF+DH+SGSKSKRPGLDKAIEFAR+GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLITLVNELN+RGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILErssagriaarargryggrPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180
            ILERSSAGRIAARARGRYGGRPEKLNK+DL LLKTLYDNGTPIKTIAEQWKVSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LNRLNNQENKDK  192
            LN+LNNQENKDK
Sbjct  181  LNKLNNQENKDK  192

58) MCCL_plsB0032 in NC_011996


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  215 bits (799),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 152/191 (80%), Positives = 177/191 (93%), Gaps = 0/191 (0%)

Query  1    MKIGYARVSTGLQNLDLQQDSLKNYGCEKIFTDKVSGAKSNRPGLESAIEFARSGDVVVV  60
            MKIGYARVSTGLQNL+LQ+D L+  GCEKIF D +SG+KS+RPGL+ AIEFARSGD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLISIVNALNNRGISFHSIQENITMDKSSSTGQllfhlfaafaEFERNL  120
            WRLDRLGRNMEDLI++VN LN+RG+SFHS++ENITMDKSSSTGQLLFHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  ILERSaagrvaarargrlggrPEKLNDSDLKLLKTLVDSGTPIKTIAEKWNVSRTTVYRY  180
            ILERS+AGR+AARARGR GGRPEKLN  DL LLKTL D+GTPIKTIAE+W+VSRTT+YRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LEKMNNKDIKN  191
            L+K+NN++ K+
Sbjct  181  LNKLNNQENKD  191

59) tnpR in NC_007103


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  206 bits (765),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 131/183 (72%), Positives = 161/183 (88%), Gaps = 0/183 (0%)

Query  1    MLIGYARVSTGLQNLDLQTDALTQYGCKKIFHDKMSGTKKQRPGLEEAIHYAREGDTIVV  60
            M IGYARVSTGLQNL+LQ D L   GC KIF+D MSG+K +RPGL+ AI++AR GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMQDLIQIVNNLNKRGIGFHSLQENLTMDKSNATGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNM+DLI +VN+LN RG++FHSL+EN+TMDKS++TGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IEErsaagraaarargrlggrPEKFGLKDIEMMKSLIESGTPIKDVAEKWGVSRTTIYRY  180
            I ERS+AGR AARARGR GGRPEK+  +D+ ++K+L ++GTPIK +AE+W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LER  183
            L++
Sbjct  181  LNK  183

60) BCAH820_B0219 in NC_011777


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  205 bits (763),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 130/183 (72%), Positives = 161/183 (88%), Gaps = 0/183 (0%)

Query  1    MLIGYARVSTGLQNLDLQTDALTQYGCKKIFQDKMSGTKKQRPGLEEAIHYAREGDTIVV  60
            M IGYARVSTGLQNL+LQ D L   GC KIF+D MSG+K +RPGL+ AI++AR GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMQDLIQIVNNLNKRGIGFHSLQENLTMEKSNATGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNM+DLI +VN+LN RG++FHSL+EN+TM+KS++TGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IEErsaagraaarargrlggrPEKFGLKDIEMMKSLIESGTPIKDVAEKWGVSRTTIYRY  180
            I ERS+AGR AARARGR GGRPEK+  +D+ ++K+L ++GTPIK +AE+W VSRTTIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LER  183
            L++
Sbjct  181  LNK  183

61) SE_p411 in NC_005005


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  191 bits (707),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 155/158 (99%), Positives = 157/158 (99%), Gaps = 0/158 (0%)

Query  1    MSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNNRGVSFHSLEENI  60
            MSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELN+RGVSFHSLEENI
Sbjct  35   MSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENI  94

Query  61   TMDKSSSTGQllfhlfaafaEFERNLILErssagriaarargryggrPEKLNKQDLKLLK  120
            TMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNK+DL LLK
Sbjct  95   TMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK  154

Query  121  TLYDNGTPIKTIAEQWKVSRTTIYRYLNKLNNQENKDK  158
            TLYDNGTPIKTIAEQWKVSRTTIYRYLNKLNNQENKDK
Sbjct  155  TLYDNGTPIKTIAEQWKVSRTTIYRYLNKLNNQENKDK  192

62) uc509_p8044 in NC_019430


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  190 bits (704),  Expect = 7e-50, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 149/164 (91%), Gaps = 0/164 (0%)

Query  1    MNIGYARVSTGLQNLDLQKDSLKKYDCEKIFTDHLSGSKKDRPGLKSAIEFSRSGDTIVV  60
            M+IGYARVSTGLQNL+LQ D L+  +CEKIF DH+SGSK  RPGL  AIEF+RSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNMEDLISIVNSLNDKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNL  120
            WRLDRLGRNMEDLI++VN LN++GVSFHSL+ENITMDKSSSTGQL+FHLFAAFAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IlersaagreaarargrlggrPEKFSEQDVKLLKTLVESGTPIK  164
            ILERS+AGR AARARGR GGRPEK++ +D+ LLKTL ++GTPIK
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIK  164

63) SE_p509 in NC_005004


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  186 bits (688),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 149/155 (97%), Positives = 154/155 (99%), Gaps = 0/155 (0%)

Query  1    MSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENI  60
            MSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENI
Sbjct  35   MSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENI  94

Query  61   TMDKSSSTGQllfhlfaafaEFERNLILErssagriaarargryggrPEKLNKQDLNLLK  120
            TMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNK+DL LLK
Sbjct  95   TMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK  154

Query  121  TLYDNGTPIKTIAEQWKVSRTTIYRYLNKLEDKED  155
            TLYDNGTPIKTIAEQWKVSRTTIYRYLNKL+++E+
Sbjct  155  TLYDNGTPIKTIAEQWKVSRTTIYRYLNKLNNQEN  189

64) BTF1_32536 in NC_018510


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  185 bits (685),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 121/183 (67%), Positives = 157/183 (86%), Gaps = 0/183 (0%)

Query  1    MKIGYVRVSTVDQNLDLQIDALKAYGCDEIFEDKLSGIAGKRPGLEKALQYVRPGDSLVV  60
            MKIGY RVST  QNL+LQ D L++ GC+ IF+D +SG  +KRPGL+KA+++ R+GD++VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRTMHHLIQIVNELNEQGVSFYSVQENITMDRSSATGQLMFHLFASFAEFERNL  120
            WRLDRLGR M++LI +VNELNE+GVSF S++ENITMD+SS+TGQL+FHLFA+FAEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  irerteagriaarargrfggrPEKLGEKEQQMIQTLVSKKTPIKDIAQILKISRTTVYRY  180
            I ER+ AGRIAARARGR+GGRPEKL  ++  +++TL  + TPIK IA+  K+SRTT+YRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  181  LQK  183
            L+K
Sbjct  181  LNK  183

65) Cri9333_0511 in NC_019753


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  158 bits (583),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 95/184 (52%), Positives = 134/184 (73%), Gaps = 3/184 (1%)

Query  26   MLVGYARVSTIDQNLDLQREALQQAGCEKVFTDIASGIQDSRSGLTEALNYLRAGDTLVV  85
            M +GYARVST  QNL+LQ + L+  GCEK+F D  SG +  R+GL  A+++ R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  86   WKLDRLGRSLKHLIETVNTLGTKSISFCSLQE--TLDTTTSGGKLIFHLFAALAEFETEV  143
            W+LDRLGR++ +LI  VN L  +++SF SL+E  T+D ++S G+L+FHLFAA+AEFE ++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  144  IRERTRAGLKAAKARGHQGGRPRKLDASSLNMAKLLISEGNTSVTEICRTLQVSRSTLYR  203
            I ER+ AG  AA+ARG+ GGRP KL+   L + K L  +G T++  I    +VSR+T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNG-TPIKTIAEQWKVSRTTIYR  179

Query  204  YLGK  207
            YL K
Sbjct  180  YLNK  183

66) Cal6303_5631 in NC_019727


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  156 bits (576),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 97/191 (51%), Positives = 140/191 (74%), Gaps = 7/191 (3%)

Query  1    MLIGYARVSTEDQNLDLQMDALRQAGCEKVYTDHISGAKAARPGLLLAFEVARTGDVLVV  60
            M IGYARVST  QNL+LQ D L   GCEK++ DH+SG+K+ RPGL  A+E AR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKDLIETMETLDKRGIGLSSLQESIT--TTSGSGRLIFHLFGALAEFERNL  118
            WRLDRLGR++ DLI  ++ L+ RG+++ SL+E+IT   +S++G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ISERTTAGLMAARKRGHRGGRPKALDPAKRQLAV--KLYTERQHTIIEICKLMGISKPTL  176
            I ER++AG +AAR RG+ GGRP  L+  KR+L++   LY +    I  I     +S+ T+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN--KRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTI  177

Query  177  YNYVAEIETEH  187
            Y Y+  ++ ++
Sbjct  178  YRYLNKLNNQE  188

67) Fphi_1744 in NC_010336


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  155 bits (572),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 91/184 (50%), Positives = 136/184 (74%), Gaps = 5/184 (2%)

Query  5    VGYARVSTKEQDLNLQIDSLVKYGCRKSNIYTDIISGSKSKRPGLDKCLSNLNKGDTLVV  64
            +GYARVST  Q+LNLQ D L   GC K  I+ D +SGSKSKRPGLDK +     GDT+VV
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  65   WRLDRLGRSMQHLVSLVNDLGEKGISFKSISDG-AIDTTTASGELVFNIFSSLAQFERKL  123
            WRLDRLGR+M++L++LVN+L E+G+SF S+ +  ++D ++++G+L+F++F+++A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  124  IQERTKAGLSAARARGKLGGRKKIQADDPRVIMAKNMHKDHSMPIDDICKTLKISRASFY  183
            I ER+ AG  AARARG+ GGR   + +   + + K +  D++ PI  I    K+SR+++Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIY  178

Query  184  RYIN  187
            RY+N
Sbjct  179  RYLN  182

68) Mmar10_1503 in NC_008347


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  155 bits (570),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 88/183 (49%), Positives = 131/183 (72%), Gaps = 3/183 (1%)

Query  1    MKIGYARVSTAEQTTGLQTDALGQAGCERVFDETASGAQRDRPELAKAIEFLRPGDVLVV  60
            MKIGYARVST+ Q   LQ D L   GCE++F++  SG++  RP L KAIEF R+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLARSLRQLIETVEDLQARGIGFISITEGI--DTTSAGGKLVFHIFGALAEFEREM  118
            W+LDRL+R++ +LI  V++L+ RG++F S+ E I  D +S+ G+L+FH+F+A+AEFER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTVAGLKSAKGRGVKLGRPSALTDEQIAMARSLKASGELTSKQIATQLGVSRATLYR  178
            I ER+ AG  +A++RG   GRP  L   ++++ ++L  +G    K IA Q  VSR+T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  CLS  181
             L+
Sbjct  180  YLN  182

69) Runsl_3919 in NC_015703


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 96/185 (52%), Positives = 132/185 (72%), Gaps = 6/185 (3%)

Query  1    MKIGYARVSTQDQNLGLQLDALKTAGCEKIFKEKESGGKTDRPELLKMLEQVREGDIVVV  60
            MKIGYARVST  QNL LQ D L+T GCEKIF++  SG+K+ RP L K +E  R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSLKHLIEIVNELHERKVQFVSLKETI--DTTSATGKLIFNIFASFAEFEKDM  118
            W+LDRLGR++ +LI +VNEL+ER V F SL E I  D +S+TG+L+F++FA+FAEFE+++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTKAGLANARRIGKTGGRPKGLSEESKGKAETAKILYESKSLPITSICQQLDISKAT  178
            I ER+ AG   AR  G+ GGRP  L   +K      K LY++ + PI +I +Q  +S++T
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKL---NKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  179  LYKLL  183
            +Y+ L
Sbjct  177  IYRYL  181

70) PSR_56002 in NC_014028


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  151 bits (557),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 85/183 (47%), Positives = 129/183 (71%), Gaps = 3/183 (1%)

Query  1    MRIGYARVSTGDQNLDAQIDELENAGCERVYKEKTSGAAKERPELERCMEELREGDTLCV  60
            M+IGYARVSTG QNL+ Q D L+  GCE+++++  SG+   RP L++ +E  R GDT+ V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRFGRSLKDLVSKMESLEEKGADFVSLTEGI--DTTTAQGKLTFHIFGALAEFEREL  118
            WRLDR+GR++ DL++ ++ L+E+G  F SL E I  D +++ G+L FH+F+A+AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TRERTMAGLKAARERGRVGGRPPALDEDEVPQVQAMMRDEKVSTSDICEQFEISRATLYR  178
              ER+ AG  AAR RGR GGRP  L+  ++  ++++  D+  +   I EQ  +SR+T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  179  YVG  181
            Y+ 
Sbjct  180  YLN  182

71) amb3309 in NC_007626


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 82/179 (46%), Positives = 134/179 (75%), Gaps = 3/179 (1%)

Query  11   VGYARVSTQDQSPQLQLDALHAAGCERIFSEHASGARADRPELKAALDFARNGDTVVVWK  70
            +GYARVST  Q+ +LQ D L++ GCE+IF++H SG+++ RP L  A++FAR+GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  71   LDRLARSTRQLIETVDMLDGRGIGLRSLTEAI--DTTTAGGKLIFHVFAALGEFERSLII  128
            LDRL+R+  +LI  V+ L+ RG++++SL E I  D +++ G+L+FH+FAA++EFER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  129  ERTRAGLDSARKMGRVGGRPRSLSGQDVEVARAMLASPAITVEEVARRLNVSTATLYRH  187
            ER+ AG  +AR  GR GGRP  L+ +D+ + +++  + +  +  +A + +VS +T+YR 
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYRY  180

72) Cha6605_6161 in NC_020053


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  150 bits (552),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 93/183 (51%), Positives = 135/183 (74%), Gaps = 3/183 (1%)

Query  1    MLIGYARVSTddqlldlqqdALTKVGCERIFTDRESGAKATRPGLTLALDMLRADDTLVV  60
            M IGYARVST+ Q L+LQ+D L   GCE+IF D+ SG+K+ RPGL  A++  R++DT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKNLIELTELLRERSIQLHSIQDGI--DTSTSGGQLMFHLFGALAEFERNL  118
            WRLDRLGR++ +LI L + L ER++ +HS+++ I  D S+S GQL+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTNAGLTAARTRGKTGGRPKALAPNQRALVVSLYKEKQHSLDEICQMMGISRPTLYS  178
            I ER++AG  AAR+RG+ GGRP  L   + +L+ +LY ++  ++  I +   +SR T+Y 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  179  YVA  181
            Y+ 
Sbjct  180  YLN  182

73) A225_R1p0710 in NC_018107


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 85/190 (45%), Positives = 131/190 (69%), Gaps = 2/190 (1%)

Query  1    MLVGYARVSTQDQNLELQREALTQAGCQKLFEDKLSGTRAERPGLAKALEMLRKGDTLVV  60
            M +GYARVST  QNL+LQ + L   GC+K+F+D +SG+++ RPGL KA+E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVSELHKQSIQFKSLTDAI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV+EL+ +++ F SL + I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLAVARLSGRKGGRKPKMTKSKIESAKKLLASGIAPKDVAKNLGVSIPTLYRW  178
             +ER+ AG   AR  GR GGR  K+ K  +   K L  +G + K +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  VPASGHAEQK  188
            +    + E+K
Sbjct  181  LNKLNNQENK  190

74) Sfri_3474 in NC_008345


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 85/190 (45%), Positives = 131/190 (69%), Gaps = 2/190 (1%)

Query  1    MLVGYARVSTQDQNLELQREALTQAGCQKLFEDKLSGTRAERPGLAKALEMLRKGDTLVV  60
            M +GYARVST  QNL+LQ + L   GC+K+F+D +SG+++ RPGL KA+E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVSELHKQSIQFKSLTDAI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV+EL+ +++ F SL + I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLAVARLSGRKGGRKPKMTKSKIESAKKLLASGIAPKDVAKNLGVSIPTLYRW  178
             +ER+ AG   AR  GR GGR  K+ K  +   K L  +G + K +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  VPASGHAEQK  188
            +    + E+K
Sbjct  181  LNKLNNQENK  190

75) lp12_2566 in NC_016811


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 99/184 (54%), Positives = 142/184 (78%), Gaps = 3/184 (1%)

Query  1    MRVGYARVSTHEQNLDLQLDELKKAGCEQIFTDKISGSVSERPGLEKVENFLREGDVLVV  60
            M++GYARVST  QNL+LQ D L+  GCE+IF D +SGS S RPGL+K  +F R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKHLISYVSKLEEKGIGFHSVTEAINTE--TPSGKFMFHVFGALSEFERNL  118
            WRLDRLGR++ +LI+ V+ L+E+G++FHS+ E I  +  +++G+++FH+F+A++EFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IKERTLagleaarargrqggrPEKLSDEQKELVKTLYANKKHSIQSICKMVGVGKTTLYK  178
            I ER+ AG  AARARGR GGRPEKL+  +  L+KTLY N   +I++I     V++TT+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YINQ  182
            Y+N+
Sbjct  180  YLNK  183

76) LPE509_00469 in NC_020521


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 99/184 (54%), Positives = 142/184 (78%), Gaps = 3/184 (1%)

Query  1    MRVGYARVSTHEQNLDLQLDELKKAGCEQIFTDKISGSVSERPGLEKVENFLREGDVLVV  60
            M++GYARVST  QNL+LQ D L+  GCE+IF D +SGS S RPGL+K  +F R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKHLISYVSKLEEKGIGFHSVTEAINTE--TPSGKFMFHVFGALSEFERNL  118
            WRLDRLGR++ +LI+ V+ L+E+G++FHS+ E I  +  +++G+++FH+F+A++EFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IKERTLagleaarargrqggrPEKLSDEQKELVKTLYANKKHSIQSICKMVGVGKTTLYK  178
            I ER+ AG  AARARGR GGRPEKL+  +  L+KTLY N   +I++I     V++TT+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YINQ  182
            Y+N+
Sbjct  180  YLNK  183

77) lpg2573 in NC_002942


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 99/184 (54%), Positives = 142/184 (78%), Gaps = 3/184 (1%)

Query  1    MRVGYARVSTHEQNLDLQLDELKKAGCEQIFTDKISGSVSERPGLEKVENFLREGDVLVV  60
            M++GYARVST  QNL+LQ D L+  GCE+IF D +SGS S RPGL+K  +F R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKHLISYVSKLEEKGIGFHSVTEAINTE--TPSGKFMFHVFGALSEFERNL  118
            WRLDRLGR++ +LI+ V+ L+E+G++FHS+ E I  +  +++G+++FH+F+A++EFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IKERTLagleaarargrqggrPEKLSDEQKELVKTLYANKKHSIQSICKMVGVGKTTLYK  178
            I ER+ AG  AARARGR GGRPEKL+  +  L+KTLY N   +I++I     V++TT+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YINQ  182
            Y+N+
Sbjct  180  YLNK  183

78) LP6_2606 in NC_021350


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 99/184 (54%), Positives = 142/184 (78%), Gaps = 3/184 (1%)

Query  1    MRVGYARVSTHEQNLDLQLDELKKAGCEQIFTDKISGSVSERPGLEKVENFLREGDVLVV  60
            M++GYARVST  QNL+LQ D L+  GCE+IF D +SGS S RPGL+K  +F R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKHLISYVSKLEEKGIGFHSVTEAINTE--TPSGKFMFHVFGALSEFERNL  118
            WRLDRLGR++ +LI+ V+ L+E+G++FHS+ E I  +  +++G+++FH+F+A++EFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IKERTLagleaarargrqggrPEKLSDEQKELVKTLYANKKHSIQSICKMVGVGKTTLYK  178
            I ER+ AG  AARARGR GGRPEKL+  +  L+KTLY N   +I++I     V++TT+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YINQ  182
            Y+N+
Sbjct  180  YLNK  183

79) ECO55CA74_25503 in NC_017653


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  147 bits (543),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 92/180 (52%), Positives = 130/180 (73%), Gaps = 2/180 (1%)

Query  1    MQIGYIRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSARPGLKKLLRTLSEGDTLVV  60
            M+IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +     GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLITLIEELREKGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LITL++EL E+GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTLAGLAAAREQGRIGGRRPKLTKEQHEQIARLIENGYSRKQLAIIYDIGVSTIYRY  178
            I+ER+ AG  AAR +GR GGR  KL K +   +  L +NG + K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

80) Dfer_2312 in NC_013037


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  147 bits (542),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 90/192 (47%), Positives = 140/192 (73%), Gaps = 7/192 (3%)

Query  1    MIFGYARVSTQDQNLNLQIDDLKKCGCDRIFREKVSSVKE-RPELNKLLDTARAGDTIIV  59
            M +GYARVST  QNLNLQ D L+  GC++IF + +S+ K  RP L+K ++ AR+GDTI+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  60   WKLDRLGRSLKDLIHLITEFQQKQIGFRSLNDAI--DTTTAQGRLIFNIFASLAEFERDL  117
            W+LDRLGR++ DLI L+ E++++ ++F+SL++ I  D +++ G+L+F++FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  118  IRERTKAGLSAARARGRMGGKPKGLskaamskahaakaLYDKKDKTGKEIGRVLGISRAT  177
            I ER+ AG  AARARGR GG+P  L           K+LYD ++   K I+    +SR+T
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKL---NKRDLTLLKTLYD-NGTPIKTIAEQWKVSRTT  176

Query  178  VYRYIKEIEQQQ  189
            +YRY++ +++Q+
Sbjct  177  IYRYLNKLNNQE  188

81) pKPR_0023 in NC_021231


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  147 bits (541),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 85/182 (47%), Positives = 125/182 (69%), Gaps = 2/182 (1%)

Query  5    MMIGYARVSTQDQNLDLQTEALTRAGCEKIYEDKISGVRVERPGLTRALEMLREGDTLVV  64
            M IGYARVST  QNL+LQ + L   GCEKI++D +SG +  RPGL +A+E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  65   WKLDRLGRSVKQLVDMVGELHKQGIQFKSLTDAI--DTGTPAGRFFFHVMASLAEMEREL  122
            W+LDRLGR++ +L+ +V EL+ +G+ F SL + I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  123  IIERTRAGLDAAKQLGRKGGRKPKMTSSKIESAKKLLASGIPPRDVAKDLGVSVPTLYRW  182
            I+ER+ AG  AA+  GR GGR  K+    +   K L  +G P + +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  183  LP  184
            L 
Sbjct  181  LN  182

82) pKPR_0034 in NC_021231


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  147 bits (540),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 85/182 (47%), Positives = 125/182 (69%), Gaps = 2/182 (1%)

Query  5    MMIGYARVSTQDQNLDLQTEALTRAGCEKIYEDKISGVRVERPGLTRALEMLREGDTLVV  64
            M IGYARVST  QNL+LQ + L   GCEKI++D +SG +  RPGL +A+E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  65   WKLDRLGRSVKQLVDMVGELHKQGIQFKSLTDAI--DTGTPAGRFFFHVMASLAEMEREL  122
            W+LDRLGR++ +L+ +V EL+ +G+ F SL + I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  123  IIERTRAGLDAAKQLGRKGGRKPKMTSSKIESAKKLLASGIPPRDVAKDLGVSVPTLYRW  182
            I+ER+ AG  AA+  GR GGR  K+    +   K L  +G P + +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  183  LP  184
            L 
Sbjct  181  LN  182

83) KPR_1871 in NC_021232


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  147 bits (540),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 85/182 (47%), Positives = 125/182 (69%), Gaps = 2/182 (1%)

Query  5    MMIGYARVSTQDQNLDLQTEALTRAGCEKIYEDKISGVRVERPGLTRALEMLREGDTLVV  64
            M IGYARVST  QNL+LQ + L   GCEKI++D +SG +  RPGL +A+E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  65   WKLDRLGRSVKQLVDMVGELHKQGIQFKSLTDAI--DTGTPAGRFFFHVMASLAEMEREL  122
            W+LDRLGR++ +L+ +V EL+ +G+ F SL + I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  123  IIERTRAGLDAAKQLGRKGGRKPKMTSSKIESAKKLLASGIPPRDVAKDLGVSVPTLYRW  182
            I+ER+ AG  AA+  GR GGR  K+    +   K L  +G P + +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  183  LP  184
            L 
Sbjct  181  LN  182

84) KPR_4281 in NC_021232


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  147 bits (540),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 85/182 (47%), Positives = 125/182 (69%), Gaps = 2/182 (1%)

Query  5    MMIGYARVSTQDQNLDLQTEALTRAGCEKIYEDKISGVRVERPGLTRALEMLREGDTLVV  64
            M IGYARVST  QNL+LQ + L   GCEKI++D +SG +  RPGL +A+E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  65   WKLDRLGRSVKQLVDMVGELHKQGIQFKSLTDAI--DTGTPAGRFFFHVMASLAEMEREL  122
            W+LDRLGR++ +L+ +V EL+ +G+ F SL + I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  123  IIERTRAGLDAAKQLGRKGGRKPKMTSSKIESAKKLLASGIPPRDVAKDLGVSVPTLYRW  182
            I+ER+ AG  AA+  GR GGR  K+    +   K L  +G P + +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  183  LP  184
            L 
Sbjct  181  LN  182

85) SDY_1916 in NC_007606


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTRTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+++ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTMAGLAAARNKGRIGGRPPKLTKAEWEQAGRLLAQGIPRKQVALIYDVALSTLYK  177
            I+ER+ AG  AAR +GR GGRP KL K +      L  +G P K +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

86) Alide_4514 in NC_014911


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (537),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLELQREALSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVV  60
            M IGYARVST  QNL+LQ + L+  GC K+F+D +SG+++ RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV +L+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYR  177
             +ER+ AG   A+  GR GGR  K+    +   K L  +G P K +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

87) Bcep1808_7245 in NC_009227


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (537),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLELQREALSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVV  60
            M IGYARVST  QNL+LQ + L+  GC K+F+D +SG+++ RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV +L+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYR  177
             +ER+ AG   A+  GR GGR  K+    +   K L  +G P K +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

88) ESA_pESA2p06563 in NC_009779


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (537),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLELQREALSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVV  60
            M IGYARVST  QNL+LQ + L+  GC K+F+D +SG+++ RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV +L+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYR  177
             +ER+ AG   A+  GR GGR  K+    +   K L  +G P K +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

89) ECL_A223 in NC_014107


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (537),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLELQREALSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVV  60
            M IGYARVST  QNL+LQ + L+  GC K+F+D +SG+++ RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV +L+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYR  177
             +ER+ AG   A+  GR GGR  K+    +   K L  +G P K +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

90) PADK2_14220 in NC_018080


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (537),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLELQREALSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVV  60
            M IGYARVST  QNL+LQ + L+  GC K+F+D +SG+++ RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV +L+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYR  177
             +ER+ AG   A+  GR GGR  K+    +   K L  +G P K +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

91) L483_16565 in NC_021491


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (537),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLELQREALSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVV  60
            M IGYARVST  QNL+LQ + L+  GC K+F+D +SG+++ RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV +L+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYR  177
             +ER+ AG   A+  GR GGR  K+    +   K L  +G P K +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

92) Tmz1t_2154 in NC_011662


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (537),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLELQREALSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVV  60
            M IGYARVST  QNL+LQ + L+  GC K+F+D +SG+++ RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV +L+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYR  177
             +ER+ AG   A+  GR GGR  K+    +   K L  +G P K +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

93) pinE in NC_013892


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (539),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 84/180 (47%), Positives = 131/180 (73%), Gaps = 2/180 (1%)

Query  3    RVGYIRVSTNDQNSDLQKNALVNIDCERIFEDKISGKTANRPGLKRALKYLQSGDTLVVW  62
            ++GY RVST  QN +LQ + L   +CE+IF+D +SG  ++RPGL +A+ + +SGDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KLDRLGRSVKNLVTLISELHDRGIHFQSLTDSI--DTSTAMGRFFFHVMSALAEMERELI  120
            +LDRLGR++ +L+TL++EL++RG+ F+SL ++I  D S++ G+++FH+ +A+AE ER+LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  VERTNAGLAAAREQGRIGGRPVIFTEEDRQQAARLLDKGHTRKQLSLIYHVSLSTIYKYL  180
            +ER++AG  AAR +GR GGRP  +   D      L D+G   K ++    VS +TIY+YL
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

94) Rru_B0010 in NC_007641


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (539),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 82/179 (46%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLELQRESLSKAGCQKVFEDKVSGTRADRPGLAKALEMLREDDTLVV  60
            M IGYARVST  QNL+LQ + L+  GC+K+F+D +SG+++ RPGL KA+E  R +DT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVGDLHKQGIQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV +L+ +G+ F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEVAKQLGRKGGRKPKMTDSKIASAKKLLASGVPPKDVAKNLGVSIPTLYR  177
             +ER+ AG   A+  GR GGR  K+    ++  K L  +G P K +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

95) ECSE_2565 in NC_011415


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  146 bits (539),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 91/179 (51%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  1    MLIGYIRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+K+ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDNI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL +NI  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTMAGLAAARNKGRIGGRPPKLTKAEWEQAGRLLAQGIPRKQVALIYDVALSTLYK  177
            I+ER+ AG  AAR +GR GGRP KL K +      L  +G P K +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

96) gin in NC_017660


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTRTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+++ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTMAGLAAARNKGRIGGRPPKLTKAEWEQAGRLLAQGIPRKQVALIYDVALSTLYK  177
            I+ER+ AG  AAR +GR GGRP KL K +      L  +G P K +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

97) EKO11_3654 in NC_016902


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTRTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+++ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTMAGLAAARNKGRIGGRPPKLTKAEWEQAGRLLAQGIPRKQVALIYDVALSTLYK  177
            I+ER+ AG  AAR +GR GGRP KL K +      L  +G P K +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

98) LY180_01330 in NC_022364


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTRTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+++ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTMAGLAAARNKGRIGGRPPKLTKAEWEQAGRLLAQGIPRKQVALIYDVALSTLYK  177
            I+ER+ AG  AAR +GR GGRP KL K +      L  +G P K +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

99) gin in NC_017635


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTRTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+++ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTMAGLAAARNKGRIGGRPPKLTKAEWEQAGRLLAQGIPRKQVALIYDVALSTLYK  177
            I+ER+ AG  AAR +GR GGRP KL K +      L  +G P K +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

100) gin in NC_017664


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTRTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+++ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTMAGLAAARNKGRIGGRPPKLTKAEWEQAGRLLAQGIPRKQVALIYDVALSTLYK  177
            I+ER+ AG  AAR +GR GGRP KL K +      L  +G P K +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

101) Anacy_1373 in NC_019771


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 96/193 (50%), Positives = 146/193 (76%), Gaps = 7/193 (3%)

Query  1    MLIGYARISTDDQNLNLQMDALQLAGCEKIYSDRTSGAKAERPGLSLALEVARTGDVLVV  60
            M IGYAR+ST+ QNLNLQ D L+  GCEKI++D+ SG+K+ RPGL  A+E AR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKDLIEMMETLDKRGIGLSSLQESIT--TTNNSGRLIFHLFGALAEFERNL  118
            WRLDRLGR++ DLI +++ L+ RG+++ SL+E+IT   ++++G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTTAGLVAArgrghrggrPKALDPTKRQLAV--RLYTEKQYTIIEICNLMGISKPTL  176
            I ER++AG +AAR+RG+ GGRP  L+  KR+L++   LY ++   I  I +   +S+ T+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN--KRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTI  177

Query  177  YNYIAEIKTEHGT  189
            Y Y+  ++ ++  
Sbjct  178  YRYLNKLNNQENK  190

102) Anacy_2120 in NC_019771


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 96/193 (50%), Positives = 146/193 (76%), Gaps = 7/193 (3%)

Query  1    MLIGYARISTDDQNLNLQMDALQLAGCEKIYSDRTSGAKAERPGLSLALEVARTGDVLVV  60
            M IGYAR+ST+ QNLNLQ D L+  GCEKI++D+ SG+K+ RPGL  A+E AR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKDLIEMMETLDKRGIGLSSLQESIT--TTNNSGRLIFHLFGALAEFERNL  118
            WRLDRLGR++ DLI +++ L+ RG+++ SL+E+IT   ++++G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTTAGLVAArgrghrggrPKALDPTKRQLAV--RLYTEKQYTIIEICNLMGISKPTL  176
            I ER++AG +AAR+RG+ GGRP  L+  KR+L++   LY ++   I  I +   +S+ T+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN--KRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTI  177

Query  177  YNYIAEIKTEHGT  189
            Y Y+  ++ ++  
Sbjct  178  YRYLNKLNNQENK  190

103) Anacy_2144 in NC_019771


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 96/193 (50%), Positives = 146/193 (76%), Gaps = 7/193 (3%)

Query  1    MLIGYARISTDDQNLNLQMDALQLAGCEKIYSDRTSGAKAERPGLSLALEVARTGDVLVV  60
            M IGYAR+ST+ QNLNLQ D L+  GCEKI++D+ SG+K+ RPGL  A+E AR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKDLIEMMETLDKRGIGLSSLQESIT--TTNNSGRLIFHLFGALAEFERNL  118
            WRLDRLGR++ DLI +++ L+ RG+++ SL+E+IT   ++++G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTTAGLVAArgrghrggrPKALDPTKRQLAV--RLYTEKQYTIIEICNLMGISKPTL  176
            I ER++AG +AAR+RG+ GGRP  L+  KR+L++   LY ++   I  I +   +S+ T+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN--KRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTI  177

Query  177  YNYIAEIKTEHGT  189
            Y Y+  ++ ++  
Sbjct  178  YRYLNKLNNQENK  190

104) Anacy_2173 in NC_019771


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 96/193 (50%), Positives = 146/193 (76%), Gaps = 7/193 (3%)

Query  1    MLIGYARISTDDQNLNLQMDALQLAGCEKIYSDRTSGAKAERPGLSLALEVARTGDVLVV  60
            M IGYAR+ST+ QNLNLQ D L+  GCEKI++D+ SG+K+ RPGL  A+E AR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKDLIEMMETLDKRGIGLSSLQESIT--TTNNSGRLIFHLFGALAEFERNL  118
            WRLDRLGR++ DLI +++ L+ RG+++ SL+E+IT   ++++G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTTAGLVAArgrghrggrPKALDPTKRQLAV--RLYTEKQYTIIEICNLMGISKPTL  176
            I ER++AG +AAR+RG+ GGRP  L+  KR+L++   LY ++   I  I +   +S+ T+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN--KRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTI  177

Query  177  YNYIAEIKTEHGT  189
            Y Y+  ++ ++  
Sbjct  178  YRYLNKLNNQENK  190

105) Anacy_6026 in NC_019773


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 96/193 (50%), Positives = 146/193 (76%), Gaps = 7/193 (3%)

Query  1    MLIGYARISTDDQNLNLQMDALQLAGCEKIYSDRTSGAKAERPGLSLALEVARTGDVLVV  60
            M IGYAR+ST+ QNLNLQ D L+  GCEKI++D+ SG+K+ RPGL  A+E AR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKDLIEMMETLDKRGIGLSSLQESIT--TTNNSGRLIFHLFGALAEFERNL  118
            WRLDRLGR++ DLI +++ L+ RG+++ SL+E+IT   ++++G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTTAGLVAArgrghrggrPKALDPTKRQLAV--RLYTEKQYTIIEICNLMGISKPTL  176
            I ER++AG +AAR+RG+ GGRP  L+  KR+L++   LY ++   I  I +   +S+ T+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN--KRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTI  177

Query  177  YNYIAEIKTEHGT  189
            Y Y+  ++ ++  
Sbjct  178  YRYLNKLNNQENK  190

106) Anacy_6064 in NC_019773


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 96/193 (50%), Positives = 146/193 (76%), Gaps = 7/193 (3%)

Query  1    MLIGYARISTDDQNLNLQMDALQLAGCEKIYSDRTSGAKAERPGLSLALEVARTGDVLVV  60
            M IGYAR+ST+ QNLNLQ D L+  GCEKI++D+ SG+K+ RPGL  A+E AR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKDLIEMMETLDKRGIGLSSLQESIT--TTNNSGRLIFHLFGALAEFERNL  118
            WRLDRLGR++ DLI +++ L+ RG+++ SL+E+IT   ++++G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTTAGLVAArgrghrggrPKALDPTKRQLAV--RLYTEKQYTIIEICNLMGISKPTL  176
            I ER++AG +AAR+RG+ GGRP  L+  KR+L++   LY ++   I  I +   +S+ T+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN--KRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTI  177

Query  177  YNYIAEIKTEHGT  189
            Y Y+  ++ ++  
Sbjct  178  YRYLNKLNNQENK  190

107) Anacy_6137 in NC_019774


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 96/193 (50%), Positives = 146/193 (76%), Gaps = 7/193 (3%)

Query  1    MLIGYARISTDDQNLNLQMDALQLAGCEKIYSDRTSGAKAERPGLSLALEVARTGDVLVV  60
            M IGYAR+ST+ QNLNLQ D L+  GCEKI++D+ SG+K+ RPGL  A+E AR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKDLIEMMETLDKRGIGLSSLQESIT--TTNNSGRLIFHLFGALAEFERNL  118
            WRLDRLGR++ DLI +++ L+ RG+++ SL+E+IT   ++++G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTTAGLVAArgrghrggrPKALDPTKRQLAV--RLYTEKQYTIIEICNLMGISKPTL  176
            I ER++AG +AAR+RG+ GGRP  L+  KR+L++   LY ++   I  I +   +S+ T+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN--KRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTI  177

Query  177  YNYIAEIKTEHGT  189
            Y Y+  ++ ++  
Sbjct  178  YRYLNKLNNQENK  190

108) SO_A0019 in NC_004349


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  144 bits (528),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 85/181 (47%), Positives = 127/181 (71%), Gaps = 2/181 (1%)

Query  1    MLIGYARVSTQDQHLELQREALLKAGCEKVFEDTISGTRADRLGLSKALEILREGDTLVV  60
            M IGYARVST  Q+L+LQ + L   GCEK+F+D +SG+++ R GL KA+E+ R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVELVSDLHKQNVQFKSLTDSI--DTGTPSGRFFFHVMASLAEMERDL  118
            W+LDRLGR++ +L+ LV++L+ + V F SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLDVARQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSVPTLYRW  178
            I+ER+ AG   AR  GR GGR  K+    +   K L  +G P K +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  L  179
            L
Sbjct  181  L  181

109) SO_A0170 in NC_004349


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  144 bits (528),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 85/181 (47%), Positives = 127/181 (71%), Gaps = 2/181 (1%)

Query  1    MLIGYARVSTQDQHLELQREALLKAGCEKVFEDTISGTRADRLGLSKALEILREGDTLVV  60
            M IGYARVST  Q+L+LQ + L   GCEK+F+D +SG+++ R GL KA+E+ R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVELVSDLHKQNVQFKSLTDSI--DTGTPSGRFFFHVMASLAEMERDL  118
            W+LDRLGR++ +L+ LV++L+ + V F SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLDVARQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSVPTLYRW  178
            I+ER+ AG   AR  GR GGR  K+    +   K L  +G P K +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  L  179
            L
Sbjct  181  L  181

110) hin in NC_005126


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  143 bits (525),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 85/180 (48%), Positives = 132/180 (74%), Gaps = 2/180 (1%)

Query  3    KIGYIRVSTNDQNSDLQRNALISINCEQIFEDKISGKTSNRPGLKRALKQLKKGDTLVVW  62
            KIGY RVST  QN +LQ + L +  CE+IF+D +SG  S+RPGL +A+   + GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KLDRLGRSVKNMVTLISDLSERGIHFQSLTDSI--DTSTSMGRFFFHIMSALAEMERELI  120
            +LDRLGR++ +++TL+++L+ERG+ F+SL ++I  D S+S G+++FH+ +A+AE ER+LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  VERTNAGLIAARAQGRIGGRPVSLSFVEQQQAARLLAKGHTRKQLSLIYNISLSTIYKYF  180
            +ER++AG IAARA+GR GGRP  L+  +      L  +G   K ++   ++S +TIY+Y+
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

111) Arth_0466 in NC_008541


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  143 bits (526),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 85/187 (46%), Positives = 131/187 (71%), Gaps = 2/187 (1%)

Query  5    RIGYARVSTRDQNLDLQLTALKGAGCDRIFEDTMSGTKAGRPGLAKALETLREGDTLIVW  64
            +IGYARVST  QNL+LQ   L+  GC++IF+D MSG+K+ RPGL KA+E  R GDT++VW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  65   KLDRLGRSVKDLLDFAGGLNERGIGFVSLTDSI--DTTTASGRFFFNVMASLAQMERELM  122
            +LDRLGR++ DL+ +   LNERG++F SL ++I  D ++++G+++F++ A++A+ ER+L+
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  123  VERTQAGLQAAREQGRVGGRKRVMTEAKIRSARKLLNQGTPPKEVAASLGVSVPTLYRWV  182
            +ER+ AG  AAR +GR GGR   +    +   + L ++GTP K +A    VS  T+YR +
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  183  PATNPEA  189
               N + 
Sbjct  182  NKLNNQE  188

112) pinE in NC_014228


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 87/180 (49%), Positives = 130/180 (73%), Gaps = 2/180 (1%)

Query  3    KIGYIRVSTNDQNSDLQRNALVNIHCELIFEDKISGKTANRPGLKRALKHLKSGDTLVVW  62
            KIGY RVST  QN +LQ + L    CE IF+D +SG  ++RPGL +A+   +SGDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KLDRLGRSVKNLVTLISELHERGIHFHSLTDSI--DTSTAMGRFFFHVMSALAEMERELI  120
            +LDRLGR++ +L+TL++EL+ERG+ FHSL ++I  D S++ G+++FH+ +A+AE ER+LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  VERTNAGLAAAREQGRIGGRPVIFIEEDRQQAARLLHKGHSRKQLSIIYNVSLSTIYKYL  180
            +ER++AG  AAR +GR GGRP  +   D      L ++G + K ++   +VS +TIY+YL
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

113) pREC1_0084 in NC_007486


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  5    LGYARVSTTDQNPELQLDALNAAGCFRVWTDKASGAKTDRPQLAAVMDALRPGDTLIVWR  64
            +GYARVST  QN +LQ D LN+ GC ++  D  SG+K+ RP L   ++  R+GDT++VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   IDRLGRSLSHLIDTVESLEKRGVAFRSLNDPI--DTTTSSGKLIFQIFGALSEFERNLVR  122
            +DRLGR++ +LI  V+ L+ RGV+F+SL++ I  D ++S+G+L+F++F+A++EFERNL+ 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTMAGLTAARDRGRIGGRPSSLTAAKKRQANKMRGDGVSMREIAEVLGVARSTLYRNL  181
            ER+ AG  AAR RGR GGRP  L        + + ++G +++ IAE   V+R+T+YR L
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

114) G432_19435 in NC_020542


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 89/190 (47%), Positives = 137/190 (73%), Gaps = 2/190 (1%)

Query  31   IGYARVSTADQKLSLQLDALNAAGCDRIFDDHASGAKADRPGLAEALAYLRSGDTLVVWK  90
            IGYARVST+ Q+L+LQ D LN+ GC++IF+DH SG+K+ RPGL  A+ + RSGDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  91   LDRLGRSMSHLIEKVGELATRGIGFRSLTENI--DTTTSGGMLVFNIFGSLAQFERDLIR  148
            LDRLGR+M +LI  V EL  RG++F+SL ENI  D ++S G L+F++F+++A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  149  ERTHAGLKAArergrpggrrpVVTPDKLRKAREHIASGLTVREAAARLKIGKTALYKALE  208
            ER+ AG  AAR RGR GGR   +    L   +    +G  ++  A + K+++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  209  ATEKNTKSQR  218
              +++ + ++
Sbjct  183  KLNNQENKDK  192

115) G432_19730 in NC_020542


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 89/190 (47%), Positives = 137/190 (73%), Gaps = 2/190 (1%)

Query  31   IGYARVSTADQKLSLQLDALNAAGCDRIFDDHASGAKADRPGLAEALAYLRSGDTLVVWK  90
            IGYARVST+ Q+L+LQ D LN+ GC++IF+DH SG+K+ RPGL  A+ + RSGDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  91   LDRLGRSMSHLIEKVGELATRGIGFRSLTENI--DTTTSGGMLVFNIFGSLAQFERDLIR  148
            LDRLGR+M +LI  V EL  RG++F+SL ENI  D ++S G L+F++F+++A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  149  ERTHAGLKAArergrpggrrpVVTPDKLRKAREHIASGLTVREAAARLKIGKTALYKALE  208
            ER+ AG  AAR RGR GGR   +    L   +    +G  ++  A + K+++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  209  ATEKNTKSQR  218
              +++ + ++
Sbjct  183  KLNNQENKDK  192

116) G432_21670 in NC_020544


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 89/190 (47%), Positives = 137/190 (73%), Gaps = 2/190 (1%)

Query  31   IGYARVSTADQKLSLQLDALNAAGCDRIFDDHASGAKADRPGLAEALAYLRSGDTLVVWK  90
            IGYARVST+ Q+L+LQ D LN+ GC++IF+DH SG+K+ RPGL  A+ + RSGDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  91   LDRLGRSMSHLIEKVGELATRGIGFRSLTENI--DTTTSGGMLVFNIFGSLAQFERDLIR  148
            LDRLGR+M +LI  V EL  RG++F+SL ENI  D ++S G L+F++F+++A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  149  ERTHAGLKAArergrpggrrpVVTPDKLRKAREHIASGLTVREAAARLKIGKTALYKALE  208
            ER+ AG  AAR RGR GGR   +    L   +    +G  ++  A + K+++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  209  ATEKNTKSQR  218
              +++ + ++
Sbjct  183  KLNNQENKDK  192

117) G432_00275 in NC_020561


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 89/190 (47%), Positives = 137/190 (73%), Gaps = 2/190 (1%)

Query  31   IGYARVSTADQKLSLQLDALNAAGCDRIFDDHASGAKADRPGLAEALAYLRSGDTLVVWK  90
            IGYARVST+ Q+L+LQ D LN+ GC++IF+DH SG+K+ RPGL  A+ + RSGDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  91   LDRLGRSMSHLIEKVGELATRGIGFRSLTENI--DTTTSGGMLVFNIFGSLAQFERDLIR  148
            LDRLGR+M +LI  V EL  RG++F+SL ENI  D ++S G L+F++F+++A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  149  ERTHAGLKAArergrpggrrpVVTPDKLRKAREHIASGLTVREAAARLKIGKTALYKALE  208
            ER+ AG  AAR RGR GGR   +    L   +    +G  ++  A + K+++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  209  ATEKNTKSQR  218
              +++ + ++
Sbjct  183  KLNNQENKDK  192

118) G432_10070 in NC_020561


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 89/190 (47%), Positives = 137/190 (73%), Gaps = 2/190 (1%)

Query  31   IGYARVSTADQKLSLQLDALNAAGCDRIFDDHASGAKADRPGLAEALAYLRSGDTLVVWK  90
            IGYARVST+ Q+L+LQ D LN+ GC++IF+DH SG+K+ RPGL  A+ + RSGDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  91   LDRLGRSMSHLIEKVGELATRGIGFRSLTENI--DTTTSGGMLVFNIFGSLAQFERDLIR  148
            LDRLGR+M +LI  V EL  RG++F+SL ENI  D ++S G L+F++F+++A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  149  ERTHAGLKAArergrpggrrpVVTPDKLRKAREHIASGLTVREAAARLKIGKTALYKALE  208
            ER+ AG  AAR RGR GGR   +    L   +    +G  ++  A + K+++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  209  ATEKNTKSQR  218
              +++ + ++
Sbjct  183  KLNNQENKDK  192

119) Veis_1403 in NC_008786


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 82/179 (46%), Positives = 124/179 (70%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLELQREALTKAGCKKVFEDKVSGTRADRPGLSKTLEMLREGDTLVV  60
            M IGYARVST  QNL+LQ + L   GC K+F+D +SG+++ RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV +L+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKELLASGVLPKDVAKNLGVSIPTLYR  177
             +ER+ AG   A+  GR GGR  K+    +   K L  +G   K +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

120) BAST_0134 in NC_018720


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 88/180 (49%), Positives = 138/180 (77%), Gaps = 3/180 (1%)

Query  1    MLIGYARVSTLDQNEDLQVDALKADGCDRCYVDHASGAKASRPELDRMFDVLREGDVLVV  60
            M IGYARVST  QN +LQ D L+++GC++ + DH SG+K+ RP LD+ ++  R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVQNLVDIMNRLQDMGVGFKSLTEQ--MDTTTPGGVLVFNVFAAMAQFERDL  118
            W+LDRLGR++++L+ ++N L++ GV+F SL E+  MD +++ G L+F++FAA A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTTAGLKAArsrgrvggrrPKLSKSDKSMVRQLYESRSVTVQEIAQRFNVSRGTIYK  178
            I ER++AG  AAR+RGR GGR  KL+K D ++++ LY++ +  ++ IA++ +VSR TIY+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYR  179

121) bgla_2g16460 in NC_015376


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 88/186 (48%), Positives = 126/186 (68%), Gaps = 3/186 (1%)

Query  1    MIIGYARVSTEDQNLDMQIQALERLGCDEVFTDHGVSGRAASRPGLDRALARLTSGDKLV  60
            M IGYARVST  QNL++Q + L+  GC+ +F DH +SG  + RPGLD+A+    SGD +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRSLVNLVRLLESLGQRGIRFQSLTEHI--DTSSSGGRLVFHMMAALAEFERS  118
            VWRLDRLGR++ +L+ L++ L +RG+ F+SL E+I  D SSS G+L+FH+ AA+AEFER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTRAGMAAARVNGKPMGRPPSLSPVQIEQARRLLESGKCRSEIAVQLGVHPRTLKR  178
            LI ER+ AG  AAR  G+  GRP  L+  ++   + L ++G     IA Q  V   T+ R
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  179  TLARMD  184
             L +++
Sbjct  180  YLNKLN  185

122) tnpR in NC_014006


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 89/190 (47%), Positives = 137/190 (73%), Gaps = 2/190 (1%)

Query  4    IGYARVSTADQKLSLQLDALNAAGCDRIFDDHASGAKADRPGLAEALAYLRSGDTLVVWK  63
            IGYARVST+ Q+L+LQ D LN+ GC++IF+DH SG+K+ RPGL  A+ + RSGDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMSHLIEKVGELATRGIGFRSLTENI--DTTTSGGMLVFNIFGSLAQFERDLIR  121
            LDRLGR+M +LI  V EL  RG++F+SL ENI  D ++S G L+F++F+++A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTHAGLKAArergrpggrrpVVTPDKLRKAREHIASGLTVREAAARLKIGKTALYKALE  181
            ER+ AG  AAR RGR GGR   +    L   +    +G  ++  A + K+++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  ATEKNTKSQR  191
              +++ + ++
Sbjct  183  KLNNQENKDK  192

123) tnpR in NC_014013


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 89/190 (47%), Positives = 137/190 (73%), Gaps = 2/190 (1%)

Query  4    IGYARVSTADQKLSLQLDALNAAGCDRIFDDHASGAKADRPGLAEALAYLRSGDTLVVWK  63
            IGYARVST+ Q+L+LQ D LN+ GC++IF+DH SG+K+ RPGL  A+ + RSGDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMSHLIEKVGELATRGIGFRSLTENI--DTTTSGGMLVFNIFGSLAQFERDLIR  121
            LDRLGR+M +LI  V EL  RG++F+SL ENI  D ++S G L+F++F+++A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTHAGLKAArergrpggrrpVVTPDKLRKAREHIASGLTVREAAARLKIGKTALYKALE  181
            ER+ AG  AAR RGR GGR   +    L   +    +G  ++  A + K+++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  ATEKNTKSQR  191
              +++ + ++
Sbjct  183  KLNNQENKDK  192

124) G432_20910 in NC_020562


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 89/190 (47%), Positives = 137/190 (73%), Gaps = 2/190 (1%)

Query  4    IGYARVSTADQKLSLQLDALNAAGCDRIFDDHASGAKADRPGLAEALAYLRSGDTLVVWK  63
            IGYARVST+ Q+L+LQ D LN+ GC++IF+DH SG+K+ RPGL  A+ + RSGDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMSHLIEKVGELATRGIGFRSLTENI--DTTTSGGMLVFNIFGSLAQFERDLIR  121
            LDRLGR+M +LI  V EL  RG++F+SL ENI  D ++S G L+F++F+++A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTHAGLKAArergrpggrrpVVTPDKLRKAREHIASGLTVREAAARLKIGKTALYKALE  181
            ER+ AG  AAR RGR GGR   +    L   +    +G  ++  A + K+++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  ATEKNTKSQR  191
              +++ + ++
Sbjct  183  KLNNQENKDK  192

125) Bacsa_3704 in NC_015165


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 90/185 (49%), Positives = 132/185 (72%), Gaps = 8/185 (4%)

Query  4    IGYARVSTREQNLDLQLDALKSVGCERIFMEKASGVKE-RPELDKALSYLRAGDTFVIWK  62
            IGYARVST  QNL+LQ D L++ GCE+IF +  SG K  RP LDKA+ + R+GDT+V+W+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  63   LDRLGRSLKELVSIVDGLQKRNIAFISISDGI--NTSSALGKCQFGIFAALAEYEREMII  120
            LDRLGR++ +L+++V+ L+ R ++F S+ + I  + SS+ G+  F +FAA+AE+ER++I+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  121  ERTKAGLQAARERGKLGGRPKGLSVEGKRKAKAAKILYLNGEYSINEICKMLKIGSKATL  180
            ER+ AG  AAR RG+ GGRP  L+   KR     K LY NG  +I+ I    K+ S++T+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLN---KRDLTLLKTLYDNGT-PIKTIAEQWKV-SRTTI  177

Query  181  YRYLS  185
            YRYL+
Sbjct  178  YRYLN  182

126) G432_21645 in NC_020544


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 129/185 (70%), Gaps = 4/185 (2%)

Query  1    MRVGYARVSTSDQNPELQLDALRRAGCERVFTEKASGARDDRPELARILEDVLRAGDTLV  60
            M++GYARVST+ QN +LQ D L   GCE++F +  SG++  RP L + +E   R+GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIE-FARSGDTIV  59

Query  61   VWKLDRLARSLKKLIATAEDLEREKIGLVSLTESI--DTTTPGGMLTFHVFGAIAQFERA  118
            VW+LDRL+R++  LI+  ++L+   +++ SL E+I  D +++ G L FH+F+A+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIRERTTAGLVEARRQGRKGGRPSAMRPSDVAAARAMMKEGTLPVRDIAKRMGVSVATLY  178
            LI ER++AG + AR +GR GGRP  +   D++  +++  +GT P++ IA +  VS +T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  179  RYAGK  183
            RY  K
Sbjct  179  RYLNK  183

127) G432_21310 in NC_020562


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 129/185 (70%), Gaps = 4/185 (2%)

Query  1    MRVGYARVSTSDQNPELQLDALRRAGCERVFTEKASGARDDRPELARILEDVLRAGDTLV  60
            M++GYARVST+ QN +LQ D L   GCE++F +  SG++  RP L + +E   R+GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIE-FARSGDTIV  59

Query  61   VWKLDRLARSLKKLIATAEDLEREKIGLVSLTESI--DTTTPGGMLTFHVFGAIAQFERA  118
            VW+LDRL+R++  LI+  ++L+   +++ SL E+I  D +++ G L FH+F+A+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIRERTTAGLVEARRQGRKGGRPSAMRPSDVAAARAMMKEGTLPVRDIAKRMGVSVATLY  178
            LI ER++AG + AR +GR GGRP  +   D++  +++  +GT P++ IA +  VS +T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  179  RYAGK  183
            RY  K
Sbjct  179  RYLNK  183

128) G432_21895 in NC_020563


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 129/185 (70%), Gaps = 4/185 (2%)

Query  1    MRVGYARVSTSDQNPELQLDALRRAGCERVFTEKASGARDDRPELARILEDVLRAGDTLV  60
            M++GYARVST+ QN +LQ D L   GCE++F +  SG++  RP L + +E   R+GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIE-FARSGDTIV  59

Query  61   VWKLDRLARSLKKLIATAEDLEREKIGLVSLTESI--DTTTPGGMLTFHVFGAIAQFERA  118
            VW+LDRL+R++  LI+  ++L+   +++ SL E+I  D +++ G L FH+F+A+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIRERTTAGLVEARRQGRKGGRPSAMRPSDVAAARAMMKEGTLPVRDIAKRMGVSVATLY  178
            LI ER++AG + AR +GR GGRP  +   D++  +++  +GT P++ IA +  VS +T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  179  RYAGK  183
            RY  K
Sbjct  179  RYLNK  183

129) SFHH103_03337 in NC_016812


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  140 bits (514),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 130/185 (71%), Gaps = 4/185 (2%)

Query  1    MRVGYARVSTIDQNPELQLEALRRAGCEKVFTERGSGAADDRPELGRILSDVLRTGDTLV  60
            M++GYARVST  QN +LQ + L   GCEK+F ++ SG+   RP L++ + +  R+GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAI-EFARSGDTIV  59

Query  61   VWKLDRLARSLKKLIATAEELERAKIGLVSLTESI--DTTTPGGMLTFHVFGAIAQFERA  118
            VW+LDRL+R++  LI+  +EL+   +++ SL E+I  D +++ G L FH+F+A+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIRERTTAGLVEARQRGRKGGRPPAMRPSDIAAARALMKEGSIPVRNIAQRMGVSVATLY  178
            LI ER++AG + AR RGR GGRP  +   D++  ++L  +G+ P++ IA++  VS +T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  179  RHIGK  183
            R + K
Sbjct  179  RYLNK  183

130) SFHH103_04152 in NC_016814


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  140 bits (514),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 130/185 (71%), Gaps = 4/185 (2%)

Query  1    MRVGYARVSTIDQNPELQLEALRRAGCEKVFTERGSGAADDRPELGRILSDVLRTGDTLV  60
            M++GYARVST  QN +LQ + L   GCEK+F ++ SG+   RP L++ + +  R+GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAI-EFARSGDTIV  59

Query  61   VWKLDRLARSLKKLIATAEELERAKIGLVSLTESI--DTTTPGGMLTFHVFGAIAQFERA  118
            VW+LDRL+R++  LI+  +EL+   +++ SL E+I  D +++ G L FH+F+A+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIRERTTAGLVEARQRGRKGGRPPAMRPSDIAAARALMKEGSIPVRNIAQRMGVSVATLY  178
            LI ER++AG + AR RGR GGRP  +   D++  ++L  +G+ P++ IA++  VS +T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  179  RHIGK  183
            R + K
Sbjct  179  RYLNK  183

131) gin in NC_018192


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  140 bits (514),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 130/185 (71%), Gaps = 4/185 (2%)

Query  1    MRVGYARVSTIDQNPELQLEALRRAGCEKVFTERGSGAADDRPELGRILSDVLRTGDTLV  60
            M++GYARVST  QN +LQ + L   GCEK+F ++ SG+   RP L++ + +  R+GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAI-EFARSGDTIV  59

Query  61   VWKLDRLARSLKKLIATAEELERAKIGLVSLTESI--DTTTPGGMLTFHVFGAIAQFERA  118
            VW+LDRL+R++  LI+  +EL+   +++ SL E+I  D +++ G L FH+F+A+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIRERTTAGLVEARQRGRKGGRPPAMRPSDIAAARALMKEGSIPVRNIAQRMGVSVATLY  178
            LI ER++AG + AR RGR GGRP  +   D++  ++L  +G+ P++ IA++  VS +T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  179  RHIGK  183
            R + K
Sbjct  179  RYLNK  183

132) Zymop_0379 in NC_015709


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 100/184 (55%), Positives = 136/184 (74%), Gaps = 5/184 (2%)

Query  1    MKIGYARVSTHEENLNFQIAALEAAGCEEIFTDKVSGIKAERPGLTEALNFMREGDKFII  60
            MKIGYARVST  +NLN+Q   L++ GCE IF D +SG K+ RPGL  A++F R GD +++
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLARSLKELITLVERLKEHSILFESLSEKI--DTASSSGGLIFHIFGAMAEFERNL  118
            WRLDRL+R++ +LITLV+ L+E+++ F+SL E+I  D +SS+G L+FH+F+A AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQaglkaarargrlggrPHTPEKKIKTAID-LYHNNPDLPIAEICKLSGVSRATLY  177
            I ER+ AG  AARARGR GGRP+  +K+  T +  LY+N    PI  I     VSR+T+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT--PIKTIAEQWKVSRTTIY  178

Query  178  RYLK  181
            RYL+
Sbjct  179  RYLN  182

133) EcDH1_2489 in NC_017625


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 88/179 (50%), Positives = 127/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVVLVEELRERGINFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERG++F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLETARAQGRIGGRRPKLTPEQWAQAGRLIAAGTPRQKVAIIYDVGVSTLYK  177
            I+ER+ AG  +ARA+GR GGR  KL   + +    L   GTP + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

134) pinE in NC_017638


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 88/179 (50%), Positives = 127/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVVLVEELRERGINFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERG++F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLETARAQGRIGGRRPKLTPEQWAQAGRLIAAGTPRQKVAIIYDVGVSTLYK  177
            I+ER+ AG  +ARA+GR GGR  KL   + +    L   GTP + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

135) pinE in NC_000913


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 88/179 (50%), Positives = 127/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVVLVEELRERGINFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERG++F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLETARAQGRIGGRRPKLTPEQWAQAGRLIAAGTPRQKVAIIYDVGVSTLYK  177
            I+ER+ AG  +ARA+GR GGR  KL   + +    L   GTP + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

136) pin in NC_007779


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 88/179 (50%), Positives = 127/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVVLVEELRERGINFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERG++F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLETARAQGRIGGRRPKLTPEQWAQAGRLIAAGTPRQKVAIIYDVGVSTLYK  177
            I+ER+ AG  +ARA+GR GGR  KL   + +    L   GTP + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

137) ABLL_0896 in NC_017192


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 87/185 (48%), Positives = 128/185 (70%), Gaps = 4/185 (2%)

Query  1    MLIGYIRVSTDDQNLNLQKDALIKYGVDERNIFSDKTSGSKDKRVGLDKAIEFLKDGDTL  60
            M IGY RVST+ QNLNLQ D L   G +  +IF+D  SGSK KR GLDKAIEF + GDT+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  61   VVWKLDRLGRSLAHLIDVITNLKNRNVSFVSITEG--MDTTTASGELFFHIFGALAQFER  118
            VVW+LDRLGR++ +LI ++ +L++R VSF S+ E   MD ++++G+L+FH+F+A+A+FER
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  119  SLIQERVKAGLESAKLRGIRGGRPRAIDDEKMVAIKKALEDGMSKAAVCRTFGVKRSTLI  178
            +LI ER  AG  +A+ RG  GGRP  ++   +  +K   ++G +  ++     V R+T+ 
Sbjct  119  NLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  179  DSLNR  183
              LN+
Sbjct  179  RYLNK  183

138) hin in NC_011283


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 86/181 (48%), Positives = 130/181 (72%), Gaps = 2/181 (1%)

Query  1    MLIGYARVSTGDQNLDLQKNALIRAECELVFEDMASGKNARRPELKRALRRLKPGDVLVV  60
            M IGYARVSTG QNL+LQ + L    CE +F+D  SG +++RP L +A+   ++GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVRDLITLVSELQARGVNFRSLTDSI--DTSTPAGRFFFHVMSALAEMEREL  118
            W+LDRLGR++ DLITLV+EL+ RGV+F+SL ++I  D S+++G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLAAAREQGRVGGRRRLMTTEVVERCRRMLENGATRQQIADVTGVGVKTIYKY  178
            I+ER+ AG  AAR +GR GGR   +    +   + + +NG+  + IA+   V+  TIY+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  L  179
            L
Sbjct  181  L  181

139) Xaut_0536 in NC_009720


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 87/183 (48%), Positives = 134/183 (74%), Gaps = 3/183 (1%)

Query  1    MLIGYARVSTGDQNLDLQRQALIAAGCQRLHEDSGVSGAMVIRPGLRRALKTARAGDVLV  60
            M IGYARVSTG QNL+LQ + L + GC+++ +D  +SG+   RPGL +A+  AR+GD +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRSIKDLIDIVGQLQQRGIGFLSLQEQI--DTTSAAGRFYLHMLAALAEFERE  118
            VWRLDRLGR++ DLI +V +L++RG++F SL+E+I  D +S++G++ +H++AA+AEFER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIRDRTRAGLDAARSRGVVMGRPRKLSPAQIADARNLIASGRTVTSVAAACGVTRTTLRR  178
            LI +R+ AG  AAR+RG   GRP KL+  +++  + L  +G  + ++A    V+RTT+ R
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  179  LLG  181
             L 
Sbjct  180  YLN  182

140) amb3169 in NC_007626


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 77/169 (46%), Positives = 122/169 (73%), Gaps = 3/169 (1%)

Query  6    QSPQLQLDALGGVGCERIFSEHASGAHADRPELKAALGFARNGDTVVVWKLDRLARSTRQ  65
            Q+ +LQ D L   GCE+IF++H SG+ + RP L  A+ FAR+GDT+VVW+LDRL+R+  +
Sbjct  13   QNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMED  72

Query  66   LIETVDMLNERGIGLRSLTEAI--DTTTAGGKLIFHIFAALGEFERSLIIERTRAGLDSA  123
            LI  V+ LNERG++++SL E I  D +++ G+L+FH+FAA++EFER+LI+ER+ AG  +A
Sbjct  73   LITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAA  132

Query  124  RKMGRMGGRPRSLSDQDVEVARAMLASPVITVEEVARRLNVSTATLYRH  172
            R  GR GGRP  L+ +D+ + +++  +    +  +A + +VS +T+YR 
Sbjct  133  RARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRY  180

141) HDEF_0740 in NC_012751


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 100/183 (55%), Positives = 138/183 (76%), Gaps = 3/183 (1%)

Query  1    MLLGYARVSTDDQNLHLQLDALNLAGCEKIFEDRFSGAKSERPGLQNILDYARSGDTIVV  60
            M +GYARVST+ QNL+LQ D LN  GCEKIF+D+ SG+KS RPGL++ +++ARSGDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRFSRSLKDLIDIVTLLGSKEIGLKSLQEAI--DTSSSSGKLIFHLFGALAEFERNL  118
            WRLDR++R++ DLI +V  L  + +++ SL+E I  D SSS+G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQaglkaarargrhggrPKALSQDKQALSVKLYDDKKHTVYQICEMMGISKPTLYK  178
            I ER+ AG  AARARGR GGRP  L++   +L   LYD+    +  I E   +S+ T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YIE  181
            Y++
Sbjct  180  YLN  182

142) BP1026B_I1649 in NC_017831


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 92/181 (51%), Positives = 125/181 (70%), Gaps = 6/181 (3%)

Query  1    MKIGYARVSTEEQNLALQRDALMRAGCKRIFTDRGVSGTEFDRPGLNRALASLRAGDTLV  60
            MKIGYARVST  QNL LQ D L   GC +IF D+ +SG+   RPGL++A+   R+GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRALPKLVGLVQQLSLREIQFESLTE--AMTTNSSSGMLVFHMMAALAQFERS  118
            VWRLDRLGR +  L+ LV++L+ R + F+SL E  +M  +SS+G L+FH+ AA+A+FER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTCAGMAAARARGQILGRRPALNEKQRAQALKLLLTQ--PIKCVAKQFNVHPRTLQ  176
            LI ER+ AG  AARARG+  GR   LN ++ +  LK L  +  PIK +A Q +V   T+ 
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLT-LLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  177  R  177
            R
Sbjct  179  R  179

143) BPSL1702 in NC_006350


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 92/181 (51%), Positives = 125/181 (70%), Gaps = 6/181 (3%)

Query  1    MKIGYARVSTEEQNLALQRDALMRAGCKRIFTDRGVSGTEFDRPGLNRALASLRAGDTLV  60
            MKIGYARVST  QNL LQ D L   GC +IF D+ +SG+   RPGL++A+   R+GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRALPKLVGLVQQLSLREIQFESLTE--AMTTNSSSGMLVFHMMAALAQFERS  118
            VWRLDRLGR +  L+ LV++L+ R + F+SL E  +M  +SS+G L+FH+ AA+A+FER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTCAGMAAARARGQILGRRPALNEKQRAQALKLLLTQ--PIKCVAKQFNVHPRTLQ  176
            LI ER+ AG  AARARG+  GR   LN ++ +  LK L  +  PIK +A Q +V   T+ 
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLT-LLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  177  R  177
            R
Sbjct  179  R  179

144) GBP346_A2066 in NC_012695


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 92/181 (51%), Positives = 125/181 (70%), Gaps = 6/181 (3%)

Query  1    MKIGYARVSTEEQNLALQRDALMRAGCKRIFTDRGVSGTEFDRPGLNRALASLRAGDTLV  60
            MKIGYARVST  QNL LQ D L   GC +IF D+ +SG+   RPGL++A+   R+GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRALPKLVGLVQQLSLREIQFESLTE--AMTTNSSSGMLVFHMMAALAQFERS  118
            VWRLDRLGR +  L+ LV++L+ R + F+SL E  +M  +SS+G L+FH+ AA+A+FER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTCAGMAAARARGQILGRRPALNEKQRAQALKLLLTQ--PIKCVAKQFNVHPRTLQ  176
            LI ER+ AG  AARARG+  GR   LN ++ +  LK L  +  PIK +A Q +V   T+ 
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLT-LLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  177  R  177
            R
Sbjct  179  R  179

145) pinE in NC_015710


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 81/184 (45%), Positives = 132/184 (72%), Gaps = 5/184 (2%)

Query  6    LGYARVSRDDQNLELQINSLQSAGCKEELIFTDKISGAKSVRPGLEQCLKELKNGDTLIV  65
            +GYARVS + QNL+LQ + L++ GC  E IF D +SG+KS RPGL++ +   ++GDT++V
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  66   WRLDRLGRSMSHLVKLIEELRQDGISFKSICDG-AIDTTTASGELIFNIFSSLAQFERRL  124
            WRLDRLGR+M +L+ L++EL + G+SF S+ +  ++D ++++G+L+F++F+++A+FER L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  125  IQERTRAGLSAARSRGKMGGRKPILPSDPRVKTAKRMHEDKSIKIEEICKTLRISRPTLY  184
            I ER+ AG  AAR+RG+ GGR   L +   +   K + ++ +  I  I    ++SR T+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKL-NKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIY  178

Query  185  RYLS  188
            RYL+
Sbjct  179  RYLN  182

146) ZZ6_0410 in NC_018145


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  138 bits (508),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 98/184 (54%), Positives = 135/184 (74%), Gaps = 5/184 (2%)

Query  1    MKIGYARVSTHEENLDDQIKALKEAGCEEVFTDKVSSIKAERPGLEEALNFMREGDKFIV  60
            MKIGYARVST  +NL+ Q   L+  GCE +F D +S+ K+ RPGL+ A++F R GD ++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLARSLKELITLVDNLKKRSVLFESLSEKI--DTASSDGGLIFHIFGAMAEFERNL  118
            WRLDRL+R++ +LITLV++L+ R+V F+SL E+I  D +SS G L+FH+F+A AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQaglkaarargrlggrPHMPEDKINTAI-TLYHSNPDMPIADICQASGVSRATLY  177
            I ER+ AG  AARARGR GGRP+  + +  T + TLY++    PI  I +   VSR+T+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT--PIKTIAEQWKVSRTTIY  178

Query  178  RYLK  181
            RYL+
Sbjct  179  RYLN  182

147) UWK_03613 in NC_020305


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  138 bits (508),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 95/183 (52%), Positives = 133/183 (73%), Gaps = 3/183 (1%)

Query  1    MKIGYARVSTGDQNPELQIDALEKAGCEKIYTDKISGAKTDRPNLKDALGYVRKGDCLVV  60
            MKIGYARVSTG QN +LQ D L+  GCEKI+ D +SG+K+ RP L  A+ + R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKHLIEVVEGLEAQGTGFISLQEGF--DTTSSGGKLVFQIFGALAEFERNL  118
            WRLDRLGR++ +LI +V+ L+ +G +F SL+E +  D +SS G+L+F++F+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTkagleaarargrvggrkakLDSDQVGTLKAMHESRKHTIKEICSVFGISKPTFYR  178
            I ER+ AG  AARARGR GGR  KL+  ++  LK++ ++    IK I     +S+ T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYR  179

Query  179  YLE  181
            YL+
Sbjct  180  YLN  182

148) SL003B_0645 in NC_015259


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 96/183 (53%), Positives = 138/183 (76%), Gaps = 3/183 (1%)

Query  1    MNIGYARVSTDEQKSTLQTDALKAAGCERIFGETASGAKSDRPGLEQALNFMRPGDTLVV  60
            M+IGYARVST+ Q+  LQ D L++ GCE+IF +  SG+KS RPGL++A++F R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLARSMRQLIDTVELLQSKGIGFRSLTEAI--DTTTAGGMLVFHIFGALAEFERAI  118
            W+LDRL+R+M +LI  V+ L+ +G++F+SL E I  D +++ G L+FH+F+A+AEFER +
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTRAGLEAArvrgrkggrprklskADIRVAKTLLSDPEISVAEVAERLGVSIATLYR  178
            I ER+ AG  AAR RGR GGRP KL+K D+ + KTL  D   ++  +AE+  VS +T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  179  YLP  181
            YL 
Sbjct  180  YLN  182

149) invA in NC_008618


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 90/184 (49%), Positives = 133/184 (73%), Gaps = 3/184 (1%)

Query  20   MIYGYARVSTNDQTTNLQKDALEKAGCDRIFTEVASGAKAHRPELDHMLDLLREGDTVVV  79
            M  GYARVST  Q  NLQ D L+  GC++IF +  SG+K+ RP LD  +++ R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  80   WKLDRLGRSMQNLVDLMTTFDERGVQFRSLTESI--DTNTPGGTLVFNIFGSLAQFERDL  137
            W+LDRLGR+M++L+ L+  ++ERGV F+SL E+I  D +++ G L+F++F+++A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  138  IrertragleaarargrkggrPAKLDEKQVREVRRLYESRTVTVDQIATMMGVGRSTIYR  197
            I ER+ AG  AARARGR GGRP KL+ +++  ++ LY++    +  IA    V+R+TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYR  179

Query  198  CLNT  201
             LN 
Sbjct  180  YLNK  183

150) amad1_21363 in NC_019394


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 89/187 (48%), Positives = 139/187 (75%), Gaps = 5/187 (2%)

Query  3    LKIGYARVSTSDQDLNLQIDALMNNGCAPEHIFTDKTSGAKSTRPGLDKCLDTLSSGDIL  62
            +KIGYARVST+ Q+LNLQ D L  +GC  E IF D  SG+KS RPGLDK ++   SGD +
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  63   IVWRLDRLGRSMSHLINLIESLVEKDIGFKSIQDG-AIDTTTASGELMFNIFSALSQFER  121
            +VWRLDRLGR+M +LI L++ L E++++F S+++  ++D ++++G+L+F++F+A+++FER
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  122  RLIQERTNaglsaarargrnggrPKIGINNPKVQMAKQMHQNNSLSIESICNSLSISKAT  181
             LI ER++AG  AARARGR GGRP   +N+  + + K + +N + +I +I +   +S++T
Sbjct  119  NLILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  182  FYRYLAM  188
            +YRYL  
Sbjct  177  IYRYLNK  183

151) I633_22401 in NC_021709


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 89/187 (48%), Positives = 139/187 (75%), Gaps = 5/187 (2%)

Query  3    LKIGYARVSTSDQDLNLQIDALMNNGCAPEHIFTDKTSGAKSTRPGLDKCLDTLSSGDIL  62
            +KIGYARVST+ Q+LNLQ D L  +GC  E IF D  SG+KS RPGLDK ++   SGD +
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  63   IVWRLDRLGRSMSHLINLIESLVEKDIGFKSIQDG-AIDTTTASGELMFNIFSALSQFER  121
            +VWRLDRLGR+M +LI L++ L E++++F S+++  ++D ++++G+L+F++F+A+++FER
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  122  RLIQERTNaglsaarargrnggrPKIGINNPKVQMAKQMHQNNSLSIESICNSLSISKAT  181
             LI ER++AG  AARARGR GGRP   +N+  + + K + +N + +I +I +   +S++T
Sbjct  119  NLILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  182  FYRYLAM  188
            +YRYL  
Sbjct  177  IYRYLNK  183

152) I607_20072 in NC_021711


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 89/187 (48%), Positives = 139/187 (75%), Gaps = 5/187 (2%)

Query  3    LKIGYARVSTSDQDLNLQIDALMNNGCAPEHIFTDKTSGAKSTRPGLDKCLDTLSSGDIL  62
            +KIGYARVST+ Q+LNLQ D L  +GC  E IF D  SG+KS RPGLDK ++   SGD +
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  63   IVWRLDRLGRSMSHLINLIESLVEKDIGFKSIQDG-AIDTTTASGELMFNIFSALSQFER  121
            +VWRLDRLGR+M +LI L++ L E++++F S+++  ++D ++++G+L+F++F+A+++FER
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  122  RLIQERTNaglsaarargrnggrPKIGINNPKVQMAKQMHQNNSLSIESICNSLSISKAT  181
             LI ER++AG  AARARGR GGRP   +N+  + + K + +N + +I +I +   +S++T
Sbjct  119  NLILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  182  FYRYLAM  188
            +YRYL  
Sbjct  177  IYRYLNK  183

153) I876_09780 in NC_021717


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 89/187 (48%), Positives = 139/187 (75%), Gaps = 5/187 (2%)

Query  3    LKIGYARVSTSDQDLNLQIDALMNNGCAPEHIFTDKTSGAKSTRPGLDKCLDTLSSGDIL  62
            +KIGYARVST+ Q+LNLQ D L  +GC  E IF D  SG+KS RPGLDK ++   SGD +
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  63   IVWRLDRLGRSMSHLINLIESLVEKDIGFKSIQDG-AIDTTTASGELMFNIFSALSQFER  121
            +VWRLDRLGR+M +LI L++ L E++++F S+++  ++D ++++G+L+F++F+A+++FER
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  122  RLIQERTNaglsaarargrnggrPKIGINNPKVQMAKQMHQNNSLSIESICNSLSISKAT  181
             LI ER++AG  AARARGR GGRP   +N+  + + K + +N + +I +I +   +S++T
Sbjct  119  NLILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  182  FYRYLAM  188
            +YRYL  
Sbjct  177  IYRYLNK  183

154) I634_09835 in NC_021712


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 89/187 (48%), Positives = 139/187 (75%), Gaps = 5/187 (2%)

Query  3    LKIGYARVSTSDQDLNLQIDALMNNGCAPEHIFTDKTSGAKSTRPGLDKCLDTLSSGDIL  62
            +KIGYARVST+ Q+LNLQ D L  +GC  E IF D  SG+KS RPGLDK ++   SGD +
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  63   IVWRLDRLGRSMSHLINLIESLVEKDIGFKSIQDG-AIDTTTASGELMFNIFSALSQFER  121
            +VWRLDRLGR+M +LI L++ L E++++F S+++  ++D ++++G+L+F++F+A+++FER
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  122  RLIQERTNaglsaarargrnggrPKIGINNPKVQMAKQMHQNNSLSIESICNSLSISKAT  181
             LI ER++AG  AARARGR GGRP   +N+  + + K + +N + +I +I +   +S++T
Sbjct  119  NLILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  182  FYRYLAM  188
            +YRYL  
Sbjct  177  IYRYLNK  183

155) I635_21364 in NC_021718


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 89/187 (48%), Positives = 139/187 (75%), Gaps = 5/187 (2%)

Query  3    LKIGYARVSTSDQDLNLQIDALMNNGCAPEHIFTDKTSGAKSTRPGLDKCLDTLSSGDIL  62
            +KIGYARVST+ Q+LNLQ D L  +GC  E IF D  SG+KS RPGLDK ++   SGD +
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  63   IVWRLDRLGRSMSHLINLIESLVEKDIGFKSIQDG-AIDTTTASGELMFNIFSALSQFER  121
            +VWRLDRLGR+M +LI L++ L E++++F S+++  ++D ++++G+L+F++F+A+++FER
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  122  RLIQERTNaglsaarargrnggrPKIGINNPKVQMAKQMHQNNSLSIESICNSLSISKAT  181
             LI ER++AG  AARARGR GGRP   +N+  + + K + +N + +I +I +   +S++T
Sbjct  119  NLILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  182  FYRYLAM  188
            +YRYL  
Sbjct  177  IYRYLNK  183

156) ENC_16960 in NC_021046


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (504),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 123/179 (69%), Gaps = 2/179 (1%)

Query  1    MQIGYVRVSTNDQNTDLQRQALERAGCEQVFEEKMSGTVANRPALKKLLRTLSEGDTLVV  60
            M+IGY RVST  QN +LQ + L+  GCE++F++ MSG+ ++RP+L K +     GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRNLVLLVDELRQRGIHFKSLTDSI--DTSSPMGRFIFHIMSALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL +RG+ F SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLAAAREKGRIGGRRPKLTPEQWTQAGRLIANGVDRKQVAIIYDVAVCTLYK  177
            I+ER+ AG  AAR +GR GGR  KL   + T    L  NG   K +A    V+  T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

157) Arth_4383 in NC_008537


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (504),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 81/178 (46%), Positives = 127/178 (72%), Gaps = 2/178 (1%)

Query  5    RIGYARVSTRDQNLGLQIGALKKAGCDKIYEDTISGTKSHRPGLGQALDTLRDGDTLVVW  64
            +IGYARVST  QNL LQ + L+  GC+KI++D +SG+KS RPGL++A++  R GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  65   KLDRLGRSVKDLLDFAGGLNNRGVGFVSLTDAI--DTTTVSGRFFFNVMASLAQMERELM  122
            +LDRLGR++ DL+ +   LN+RGV+F SL + I  D ++ +G+++F++ A++A+ ER+L+
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  123  VERTQAGLRAAREQGRVGGRKRIMTEAKIRSARKLLNQGTPPREVATSLGISVPTLYR  180
            +ER+ AG  AAR +GR GGR   +    +   + L ++GTP + +A    +S  T+YR
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

158) DMR_40330 in NC_012796


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 85/179 (48%), Positives = 122/179 (69%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTLDQNLEFQREALIETGCRKVFEDKGNGSRTERPGLATALEVLREGDTLVV  60
            M IGYARVST  QNL++Q + L   GC K+F+D  +GS++ RPGL  A+E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLIDLVDVLSKKGVQFKSLTDSI--DTGTPSGRFFFHVMASLAEMERGL  118
            W+LDRLGR++ +LI LV+ L+ +GV F SL ++I  D ++++G+++FH+ A++AE ER L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLEVARQLGRKGGRKPKMTVSKIESAKKLLASGVPPKDVAKNLGVSIPTLYR  177
            I+ER+ AG   AR  GR GGR  K+    +   K L  +G P K +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

159) N175_00440 in NC_022223


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 89/192 (47%), Positives = 137/192 (72%), Gaps = 3/192 (1%)

Query  13   MKIGYARVSTDDQELHLQLDALNETGCDKIYTEKASGKTANRPELEKALDNLREGDVFVV  72
            MKIGYARVST+ Q+L+LQ D LN  GC+KI+ +  SG  ++RP L+KA++  R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  73   WRLDRLGRSLPHLIETVNGLKERNIGFVSIAEAI--DTSSPAGELIFHIFGAIAQFERSL  130
            WRLDRLGR++ +LI  VN L+ER ++F S+ E I  D SS++G+L+FH+F+A+A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  131  ISERTkaglaaakrrgkNVGRKPSMSKKDIRLAASMLLSESITKTEVAKHFGVSRPTLDK  190
            I ER+ AG  AA+ RG+  GR   ++K+D+ L  ++  + +  KT +A +  VSR T+ +
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTTIYR  179

Query  191  ALKSITLNEQQS  202
             L+ +  +E++ 
Sbjct  180  YLNKLNNQENKD  191

160) VAA_00474 in NC_015633


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 89/192 (47%), Positives = 137/192 (72%), Gaps = 3/192 (1%)

Query  13   MKIGYARVSTDDQELHLQLDALNETGCDKIYTEKASGKTANRPELEKALDNLREGDVFVV  72
            MKIGYARVST+ Q+L+LQ D LN  GC+KI+ +  SG  ++RP L+KA++  R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  73   WRLDRLGRSLPHLIETVNGLKERNIGFVSIAEAI--DTSSPAGELIFHIFGAIAQFERSL  130
            WRLDRLGR++ +LI  VN L+ER ++F S+ E I  D SS++G+L+FH+F+A+A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  131  ISERTkaglaaakrrgkNVGRKPSMSKKDIRLAASMLLSESITKTEVAKHFGVSRPTLDK  190
            I ER+ AG  AA+ RG+  GR   ++K+D+ L  ++  + +  KT +A +  VSR T+ +
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTTIYR  179

Query  191  ALKSITLNEQQS  202
             L+ +  +E++ 
Sbjct  180  YLNKLNNQENKD  191

161) Atc_2p09 in NC_015853


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  137 bits (502),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 90/182 (50%), Positives = 131/182 (72%), Gaps = 2/182 (1%)

Query  1    MLIGYARVSTQDQNLALQREALTHAGCEKILEDQLSGSRAERPGLSRALEELRPGDTLVV  60
            M IGYARVST  QNL LQ + L   GCEKI++D++SGS++ RPGL +A+E  R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVRNLIDLVSSLQDRGVHFRSLTDAI--DTGTTSGRFFFHVMASLAEMERDL  118
            W+LDRLGR++ +LI LV+ L++RGV F+SL + I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TIERTRAGLEAArklgrkpgrkrlMTESKITSARKLLDNGTPRREVAEHLGVSLPTLYRW  178
             +ER+ AG  AAR  GR  GR   +    +T  + L DNGTP + +AE+  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  IP  180
            + 
Sbjct  181  LN  182

162) Entcl_1125 in NC_014618


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  136 bits (500),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 124/179 (70%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTALQRNALESAGCEQIFEDKMSGKSADRPGLKRALKQINDGDTLVV  60
            M IGY RVST  QN  LQ + L++ GCE+IF+D MSG  + RPGL +A+     GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLISLTEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+L +EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTRAGLEVARSQGRIGGRRPKLTAEEWAQAGRLIAAGESRQRVALIFDVGLSTLYK  177
            I+ER+ AG   AR++GR GGR  KL   + +    L   G + + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

163) VC395_0021 in NC_012582


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 89/190 (47%), Positives = 136/190 (72%), Gaps = 3/190 (1%)

Query  1    MKIGYARVSTNDQELHLQLDALNEMGCDKIYTEKASGKTFNRPELEKALDNLREGDVFVV  60
            MKIGYARVST  Q+L+LQ D LN  GC+KI+ +  SG   +RP L+KA++  R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLPHLIETVNGLKERNIGFVSIAEAI--DTSSPAGELIFHIFGAIAQFERSL  118
            WRLDRLGR++ +LI  VN L+ER ++F S+ E I  D SS++G+L+FH+F+A+A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ISERTkaglaaakrrgkNVGRKPSMSRKDMRLAAGMLLSGSITKTEVAKHFGVSRPTLDK  178
            I ER+ AG  AA+ RG+  GR   ++++D+ L   +  +G+  KT +A +  VSR T+ +
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTTIYR  179

Query  179  ALKNISLEEE  188
             L++++ +E+
Sbjct  180  YLNKLNNQEN  189

164) VC0395_A2362 in NC_009457


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 89/190 (47%), Positives = 136/190 (72%), Gaps = 3/190 (1%)

Query  1    MKIGYARVSTNDQELHLQLDALNEMGCDKIYTEKASGKTFNRPELEKALDNLREGDVFVV  60
            MKIGYARVST  Q+L+LQ D LN  GC+KI+ +  SG   +RP L+KA++  R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLPHLIETVNGLKERNIGFVSIAEAI--DTSSPAGELIFHIFGAIAQFERSL  118
            WRLDRLGR++ +LI  VN L+ER ++F S+ E I  D SS++G+L+FH+F+A+A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ISERTkaglaaakrrgkNVGRKPSMSRKDMRLAAGMLLSGSITKTEVAKHFGVSRPTLDK  178
            I ER+ AG  AA+ RG+  GR   ++++D+ L   +  +G+  KT +A +  VSR T+ +
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTTIYR  179

Query  179  ALKNISLEEE  188
             L++++ +E+
Sbjct  180  YLNKLNNQEN  189

165) tnpR in NC_014006


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  136 bits (501),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 85/180 (48%), Positives = 128/180 (72%), Gaps = 2/180 (1%)

Query  23   IGYARVSTadqklalqldalsaaGCDRIFDDYASGAKADRPGLAEALTYLRTGDTLVVWK  82
            IGYARVST+ Q+L LQ D L++ GC++IF+D  SG+K+ RPGL  A+ + R+GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  83   LDRLGRSMSHLIEKVGELAARGVGFRSLTEQI--DTTTSGGMLVFNIFGSLAQFERDLIR  140
            LDRLGR+M +LI  V EL  RGV+F+SL E+I  D ++S G L+F++F+++A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  141  ERTHAGLRAARERGSQGGRRPVVTPDKLRKARAHIAAGLTVREAAARLKIGKTALYKALE  200
            ER+ AG  AAR RG  GGR   +    L   ++    G  ++  A + K+++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

166) tnpR in NC_014007


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  136 bits (501),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 85/180 (48%), Positives = 128/180 (72%), Gaps = 2/180 (1%)

Query  23   IGYARVSTadqklalqldalsaaGCDRIFDDYASGAKADRPGLAEALTYLRTGDTLVVWK  82
            IGYARVST+ Q+L LQ D L++ GC++IF+D  SG+K+ RPGL  A+ + R+GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  83   LDRLGRSMSHLIEKVGELAARGVGFRSLTEQI--DTTTSGGMLVFNIFGSLAQFERDLIR  140
            LDRLGR+M +LI  V EL  RGV+F+SL E+I  D ++S G L+F++F+++A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  141  ERTHAGLRAARERGSQGGRRPVVTPDKLRKARAHIAAGLTVREAAARLKIGKTALYKALE  200
            ER+ AG  AAR RG  GGR   +    L   ++    G  ++  A + K+++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

167) XFa0019 in NC_002490


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 87/182 (48%), Positives = 127/182 (70%), Gaps = 2/182 (1%)

Query  4    MLIGYARVSTQDQNLELQCEALAKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVV  63
            M IGYARVST  QNL+LQ + L   GC K+F+D +SG+++ RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  64   WKLDRLGRSVKQLVDLVGELHKQGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  121
            W+LDRLGR++ +L+ LV EL+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  122  IVERTRAGLEVAKQLgrkggrkrkMTDSKIESAKKLLANGVPSKDVAKNLGVSIPTLYRW  181
            I+ER+ AG   A+  GR GGR  K+    +   K L  NG P K +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  182  LP  183
            L 
Sbjct  181  LN  182

168) hin in NC_012962


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 83/180 (47%), Positives = 132/180 (74%), Gaps = 2/180 (1%)

Query  3    KIGYIRVSTNDQNSDLQRNALISINCERIFEDKISGKTANRPGlkqalkqlkkGDTLVVW  62
            KIGY RVST  QN +LQ + L +  CE+IF+D +SG  ++RPGL +A+   + GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KLDRLGRSVKNMVTLISDLSERGIHFQSLTDSI--DTSTSMGRFFFHVMSALAEMERELI  120
            +LDRLGR++ +++TL+++L+ERG+ F+SL ++I  D S+S G+++FH+ +A+AE ER+LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  VERTNAGLIAARAQGRIGGRPVSFSFTEQQQAARLLAKGHSRKQLSLIYNTSLSTIYKYF  180
            +ER++AG IAARA+GR GGRP  ++  +      L  +G + K ++   + S +TIY+Y+
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

169) rinQ in NC_011983


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 87/191 (46%), Positives = 130/191 (69%), Gaps = 4/191 (2%)

Query  1    MKIGYARVSTEDQKMDLQLNALAAAGCDRVFTDHGVSGAGFERRGLDGVMKVLRKGDTLV  60
            MKIGYARVST  Q+++LQ + L + GC+++F DH +SG+   R GLD  +   R GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRSLVRLVQFVDELGKRGVEFRSLSENI--DTTSSGGRLVFHLIAALSEFERA  118
            VWRLDRLGR++  L+ +V+EL  RGV F+SL ENI  D +SS G+L+FHL+AA++EFER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTRAGMDAARHKGLHLGRRPSLDEQQQEEAYRAVRVDGQTIPAVAKHYNVNPRTIR  178
            LI ER+ AG  AAR +G   GR   L+ ++     +++  +G  I ++A + +V+  TI 
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDL-TLLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  179  RIVSRLKAEAA  189
            R +++L+ +  
Sbjct  179  RYLNKLNNQEN  189

170) Pden_1202 in NC_008686


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 84/184 (46%), Positives = 127/184 (70%), Gaps = 4/184 (2%)

Query  1    MKIGYARVSTEDQKLDLQLTALRDAGCDEIFKDHGFSGSVMSRPGLERLLRVLKPGQTLV  60
            MKIGYARVST  Q+L+LQ   L   GC+ IF+DH  SGS   RPGL++ +   ++G+T+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRSLTGLVQVIDELGKRGVEFQSLTEEV--NTTSSGGRLVFHIMAALAEFERT  118
            VWRLDRLGR++ +L+ +++EL  RGV F+SL E++  + +SS G+L+FH+ AA+AEFER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTKAGMMEAQRNGRHIGRPPILSTEEL-LEASRCLKNESLQAVATRYGVSPRTLRR  177
            LI ER+ AG + A+  GR  GRP  L+  +L L  +   +  +++++A +  VS  T+ R
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  178  HIKK  181
             ++K
Sbjct  180  YLNK  183

171) pin in NC_018141


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 129/180 (72%), Gaps = 3/180 (1%)

Query  1    MKIGYARVSTTDQNLELQLVALKEAGCKRIYQEKISGAKRDRPELQRLLDQLRPEDVVVV  60
            MKIGYARVST  QNL+LQ   L+  GC +I+++ +SG+K  RP L++ ++  R+ D +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLARSTQHLLELIDCIRTTEASFCSLSEPWA-DTTSHAGKMIMTVFAGIAEFERDL  119
            W+LDRL+R+ ++L+ L++ +     SF SL E  + D +S +G+++  +FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  IRERTGAGRAAAKQRGVRF-GRPEKMNKEQKSLAKRLLQEDKSVSEIAKTFNVHKATIYR  178
            I ER++AGR AA+ RG R+ GRPEK+NK + +L K L +++ ++  IA   +V ++TIYR
Sbjct  121  ILERSSAGRIAARARG-RYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

172) Acife_1046 in NC_015942


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 97/186 (53%), Positives = 138/186 (75%), Gaps = 7/186 (3%)

Query  1    MLIGYARVSTDDQNLDLQRDALQAAGCERIFEDMVSGAKVDRTGMTEMLAVLRAGDTVVI  60
            M IGYARVST+ QNL+LQ D L++ GCE+IF+D +SG+K  R G+   +   R+GDT+V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKNLIAVVEHLEVAQVGLRSLQENI--DTTSSGGRLVFHLFGALAEFERNL  118
            WRLDRLGR++ +LI++V++L+   V+++SL+ENI  D +SS G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTragmaaarargrmggrPKRLDPAKRALAL--QLHQEEKYTIKEICQMMGISKSTL  176
            I ER+ AG  AARARGR GGRP +L+  KR L+L   L ++    IK I +   +S++T+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN--KRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTI  177

Query  177  YNYLAT  182
            Y YL  
Sbjct  178  YRYLNK  183

173) Zmob_0412 in NC_017262


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  134 bits (491),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 98/184 (54%), Positives = 133/184 (73%), Gaps = 5/184 (2%)

Query  1    MKIGYARVSTHEENLDDQIKALKEAGCEEVFTDKVSSIKAERPGLEEALNFMREGDKFIV  60
            MKIGYARVST  +NL+ Q   L+  GCE +F D +S+ K+ RPGL+ A++F R GD ++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLARSLKELITLVDNLKKRLVLFESLSEKI--DTASSDGGLIFHIFGAMAEFERNL  118
            WRLDRL+R++ +LITLV++L+ R V F+SL E+I  D +SS G L+FH+F+A AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQaglkaarargrlggrPHMPEDKINTAI-TLYHSNPDMPIADICRASGVSRATLY  177
            I ER+ AG  AARARGR GGRP+  + +  T + TLY++    PI  I     VSR+T+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT--PIKTIAEQWKVSRTTIY  178

Query  178  RYLK  181
            RYL+
Sbjct  179  RYLN  182

174) Za10_0407 in NC_013355


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  134 bits (491),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 98/184 (54%), Positives = 133/184 (73%), Gaps = 5/184 (2%)

Query  1    MKIGYARVSTHEENLDDQIKALKEAGCEEVFTDKVSSIKAERPGLEEALNFMREGDKFIV  60
            MKIGYARVST  +NL+ Q   L+  GCE +F D +S+ K+ RPGL+ A++F R GD ++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLARSLKELITLVDNLKKRLVLFESLSEKI--DTASSDGGLIFHIFGAMAEFERNL  118
            WRLDRL+R++ +LITLV++L+ R V F+SL E+I  D +SS G L+FH+F+A AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQaglkaarargrlggrPHMPEDKINTAI-TLYHSNPDMPIADICRASGVSRATLY  177
            I ER+ AG  AARARGR GGRP+  + +  T + TLY++    PI  I     VSR+T+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT--PIKTIAEQWKVSRTTIY  178

Query  178  RYLK  181
            RYL+
Sbjct  179  RYLN  182

175) ZMO0888 in NC_006526


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  134 bits (491),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 98/184 (54%), Positives = 133/184 (73%), Gaps = 5/184 (2%)

Query  1    MKIGYARVSTHEENLDDQIKALKEAGCEEVFTDKVSSIKAERPGLEEALNFMREGDKFIV  60
            MKIGYARVST  +NL+ Q   L+  GCE +F D +S+ K+ RPGL+ A++F R GD ++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLARSLKELITLVDNLKKRLVLFESLSEKI--DTASSDGGLIFHIFGAMAEFERNL  118
            WRLDRL+R++ +LITLV++L+ R V F+SL E+I  D +SS G L+FH+F+A AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQaglkaarargrlggrPHMPEDKINTAI-TLYHSNPDMPIADICRASGVSRATLY  177
            I ER+ AG  AARARGR GGRP+  + +  T + TLY++    PI  I     VSR+T+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT--PIKTIAEQWKVSRTTIY  178

Query  178  RYLK  181
            RYL+
Sbjct  179  RYLN  182

176) G432_07750 in NC_020561


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  134 bits (492),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 84/180 (47%), Positives = 128/180 (72%), Gaps = 2/180 (1%)

Query  4    IGYARVSTADQKLSLQQDALAHAGCERIFDDQASGAKADRPGLAEALAYLRSGDTLVVWK  63
            IGYARVST+ Q+L+LQ+D L   GCE+IF+D+ SG+K+ RPGL  A+ + RSGDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMRHLIDAVDALAARGIGFRSLTEHI--DTTTPGGMLVFNIFGALAQFERDLIR  121
            LDRLGR+M +LI  V+ L  RG++F+SL E+I  D +++ G L+F++F+A+A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTQaglsaarergsrggrrPVVTPDKLRKARQHIAAGLTVREAAARLRIGKTALYKALE  181
            ER+ AG  AAR RG  GGR   +    L   +     G  ++  A + ++++T++Y+ L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

177) Cyan7822_6640 in NC_014504


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  134 bits (490),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 99/181 (55%), Positives = 132/181 (73%), Gaps = 3/181 (1%)

Query  3    IGYARVSTDDQNLNLQRDALLSAGCTKIYEDRLSGVKVARPGLQQALSVARSGDVLVIWR  62
            IGYARVST+ QNLNLQ D L + GC KI++D++SG K  RPGL++A+  ARSGD +V+WR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  63   LDRLGRSLKDLIQTMETLEERGIELHSLSESIT--TTTSGGRLIFHLFGALAEFERNLIK  120
            LDRLGR++ DLI  ++ L+ERG+ +HSL E+IT   ++S G+L+FHLF+A+AEFERNLI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  121  ERTSaglkaarargrkggrpkalEPNKRKLAVKLYKEGQHTISEICQMMGISKPTLYSYV  180
            ER+SAG  AARARGR GGRP  L+     L   LY +G   I  I +   +S+ T+Y Y+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRYL  181

Query  181  A  181
             
Sbjct  182  N  182

178) Cyan7822_6519 in NC_014534


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  134 bits (490),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 99/181 (55%), Positives = 132/181 (73%), Gaps = 3/181 (1%)

Query  3    IGYARVSTDDQNLNLQRDALLSAGCTKIYEDRLSGVKVARPGLQQALSVARSGDVLVIWR  62
            IGYARVST+ QNLNLQ D L + GC KI++D++SG K  RPGL++A+  ARSGD +V+WR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  63   LDRLGRSLKDLIQTMETLEERGIELHSLSESIT--TTTSGGRLIFHLFGALAEFERNLIK  120
            LDRLGR++ DLI  ++ L+ERG+ +HSL E+IT   ++S G+L+FHLF+A+AEFERNLI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  121  ERTSaglkaarargrkggrpkalEPNKRKLAVKLYKEGQHTISEICQMMGISKPTLYSYV  180
            ER+SAG  AARARGR GGRP  L+     L   LY +G   I  I +   +S+ T+Y Y+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRYL  181

Query  181  A  181
             
Sbjct  182  N  182

179) ACMV_P2_00400 in NC_015187


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  134 bits (490),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 92/180 (52%), Positives = 134/180 (75%), Gaps = 3/180 (1%)

Query  4    RIGYARVSTDDQHLDLQRDALTQAGCSVIYEEAASGKNATRPELEQCRKALRAGDTLVVW  63
            +IGYARVST+ Q+L+LQ D L   GC  I+++  SG ++ RP L++     R+GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   RLDRLGRSLPDLVQIVADLEQQGVGFESLAEKI--ETSSAAGKLIFHVFAALAEFERGLI  121
            RLDRLGR++ DL+ +V +L+++GV+F+SL E+I  + SS++G+L+FH+FAA+AEFER LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  RErtqaglaaarargrtggrKPKLDAKQIRQIKVLLRDPNTSVAEVARDYGVSRTTIYKY  181
             ER+ AG  AARARGR GGR  KL+ +++  +K L  D  T++  +A +  VSRTTIY+Y
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYRY  180

180) Mjls_2258 in NC_009077


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  133 bits (488),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 78/183 (43%), Positives = 131/183 (72%), Gaps = 5/183 (2%)

Query  12   RIGYTRVSTVTQTLDQQKEALQTAGVSKVFSDVMSGARDDRPGLADLMAYVRDGDTVVVW  71
            +IGY+RVST  Q L+ Q + L+T G  K+F+D MSG++  RPGL   + + R GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  72   KLDRLGRNMLHILQTVKELAERGVTLVSTSDGI--DSSTPAGRMMIGVLGSLAEYERELI  129
            +LDRLGRNM +++  V+EL ERGV++ S  + I  D S+++G++++ +++++AE+ER+LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  130  KERTALKRAASRTDGTKF-GRPRKVDDAERIATARRMKADGYTGKAITEYLGVSRATLYR  188
             ER++  R A+R+ G ++ GRP K++  + ++  + +  +G   K+I+E   VSR+T+YR
Sbjct  122  LERSSAGRIAARARG-RYGGRPEKLNKRD-LTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  189  YLD  191
            YL+
Sbjct  180  YLN  182

181) SL003B_3610 in NC_015259


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 91/183 (50%), Positives = 132/183 (73%), Gaps = 3/183 (1%)

Query  1    MLVGYARVSTHDQNPALQLDALKQAGCGRTFIDKASGAHRERPALMSAIDYLRPGDTLVV  60
            M +GYARVST  QN  LQ D L+  GC + F D  SG+   RP+L  AI++ R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLARSMKQLIETIEVLERQGVGFRSLTEAI--DTTTAGGRLVFHIFGALAEFERAM  118
            W+LDRL+R+M +LI  ++ L+ +GV+F+SL E I  D +++ G+L+FH+F+A+AEFER +
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ILERTragldaarargrgggrPPKLTDEDVAAARTMLADSDISIEYVAKRFNISPATLYR  178
            ILER+ AG  AARARGR GGRP KL   D++  +T L D++ +I  +A + ++S +T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKT-LYDNGTPIKTIAEQWKVSRTTIYR  179

Query  179  YLP  181
            YL 
Sbjct  180  YLN  182

182) BamMC406_6608 in NC_010553


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 85/182 (47%), Positives = 124/182 (69%), Gaps = 6/182 (3%)

Query  1    MKVGYARVSTEEQFLDLQISALKDAGCDTIFSDHGVSGTRKDRQGLNDALVHLARGDTLV  60
            MK+GYARVST  Q L+LQ   L+  GC+ IF+DH +SG++  R GL+ A+     GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRSLSQLVILMNGLRDRQVHFVSLNESI--DTDSPTGMFMFHMIAALAEFERS  118
            VWRLDRLGR++ +L+ L+N L +R V F SL+E+I  D  S+TG ++FH++AA+AEFER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTKAGLAAARNRGSKLGRPRALSPQEIAEAKDLVKTYPDAFVAKLFDVHVKTLRSA  178
            LI ER+ AG  AAR RG   GRP  L+ ++++  K L   Y ++   K +  + K  R++
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTL---YDNGTPIKTIAEQWKVSRTT  176

Query  179  LY  180
            +Y
Sbjct  177  IY  178

183) Plut_0854 in NC_007512


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  132 bits (484),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 83/184 (46%), Positives = 128/184 (70%), Gaps = 5/184 (2%)

Query  12   IGYARVSTTGQELNLQLDALKQAGIPDKLIFIDKASGAKTERPGLAACMTELQAGDTLVI  71
            IGYARVST  Q+LNLQ D L+  G     IF D  SG+K+ RPGL   +   ++GDT+V+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  72   WRLDRLGRSLKHLIEIVEELKGRGVGFRSISDG-GIDTTTASGEMVFNIFATLAQFERRL  130
            WRLDRLGR++ +LI +V+EL+ RGV+F+S+ +   +D ++++G+++F++FA++A+FER L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  131  IQERTQAGLKAARSRGKKGGRPKISANDPKVQMAKKMSKNLSISVGEICSTLKISRATYY  190
            I ER+ AG  AAR+RG+ GGRP    N   + + K +  N + ++  I    K+SR+T Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIY  178

Query  191  RFLK  194
            R+L+
Sbjct  179  RYLN  182

184) Ppro_3714 in NC_008607


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 84/188 (45%), Positives = 132/188 (71%), Gaps = 2/188 (1%)

Query  1    MLVGYARVSTLDQNLDLQLSALTQAGCGKIYEDQISGTRAERPGLTLTLEVLRDGDTLVV  60
            M +GYARVST  QNL+LQ   L   GC KI++D++SG+++ RPGL  ++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKGLIDLITELEKRGVNFKSLTDSI--DTGTPSGRFFFHVMASLAQMEREL  118
            W+LDRLGR++ +LI L+ EL+ RGV+F SL ++I  D ++++G+++FH+ A++A+ ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLVAArkngriggrkrkMTDSKIESAKKLLSSGVTPKEVADNLGISIPTLYRW  178
            I+ER+ AG +AAR  GR GGR  K+    +   K L  +G   K +A++  +S  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  IPASSNHQ  186
            +   +N++
Sbjct  181  LNKLNNQE  188

185) Sphch_4111 in NC_015595


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 82/185 (45%), Positives = 122/185 (66%), Gaps = 3/185 (1%)

Query  5    LGYARVSTGDQDVAGQTMRLEEAGAIKVFTDVMSGKSMERPGLAELIAYARKGDTLAVVR  64
            +GYARVSTG Q++  Q  RL+  G  K+F D MSG    RPGL   I +AR GDT+ V R
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSLAELLTTVETLRGQGIALLSLEEKI--DTSSAAGELIFHVFGAIAHFERRLIS  122
            LDRLGR++ +L+T V+ L  +G+++ SLEE+I  D SS++G+L+FH+F+A+A+FER LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTRDGIAAARAKGKLPGR-QPLDMSKVHAAIKLVEASISPTEAARQLGIGRSTIYREMR  181
            ER+  G  AARA+G+  GR + L+   +     L + + +    A Q  ++R+TIYR + 
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  RLGVE  186
            +L  +
Sbjct  183  KLNNQ  187

186) Dsui_2526 in NC_016616


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  132 bits (484),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 129/189 (69%), Gaps = 6/189 (3%)

Query  1    MLVGYMRVSSDSDRQSTDLQRDALLAAGVDPRHLFEDHASGAKDDRAGLARALEFVRPGD  60
            M +GY RVS++   Q+ +LQ D L + G +   +F+DH SG+K  R+GL +A+EF R+GD
Sbjct  1    MKIGYARVSTGL--QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLSHLLAIVTSLKDKRVAFRSLTEN--LDTTTPSGEFLFQVFGALAQY  118
             +VVW+LDRLGR++ +L+++V  L+++ V+F+SL EN  +D ++++G++LF++F+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERALIQERVVAGLTAARKRGRIGGRPQAITGEKLDAIVAALDGGMSKAAVCRNFSVKRTT  178
            ER LI ER  AG  AAR RGR GGRP+ +    L  + +  D G +  ++  +  V RTT
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LIETLARIG  187
            +   L ++ 
Sbjct  177  IYRYLNKLN  185

187) PP1Y_Spl249 in NC_015582


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (482),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 82/183 (45%), Positives = 122/183 (67%), Gaps = 3/183 (1%)

Query  5    LGYARVSTGDQDVAGQTMRLEKAGAIKVFTDVMSGKSMERPGLVELIAYARKGDTLAVVR  64
            +GYARVSTG Q++  Q  RL+  G  K+F D MSG    RPGL   I +AR GDT+ V R
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSLAELLTTVETLRGQGIALLSLEEKI--DTSSAAGELIFHVFGAIAHFERRLIS  122
            LDRLGR++ +L+T V+ L  +G+++ SLEE+I  D SS++G+L+FH+F+A+A+FER LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTRDGIAAARAKGRQPGR-QPLDMAKVDAAIKLIEASISPTEAARQLGIGRSTVYREMK  181
            ER+  G  AARA+GR  GR + L+   +     L + + +    A Q  ++R+T+YR ++
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  RLG  184
            +L 
Sbjct  183  KLN  185

188) Avi_3440 in NC_011989


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (480),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 86/185 (47%), Positives = 133/185 (72%), Gaps = 4/185 (2%)

Query  1    MRIGYARVSTSdqnldlqlqalaqVGCERIFSDQGLSGATRQRPGLMEALAALKSGDTLV  60
            M+IGYARVST+ QNL+LQ + L   GCE+IF+D+ +SG+  +RPGL  A+   +SGDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   IWRLDRLGRSLSHLIEMVTELGERKIGLYSVNECI--DTASAGGVLIFHIMGALAQFERS  118
            +WRLDRLGR++ +LI +V EL ER +++ S++E I  D +S+ G L+FH+ +A+A+FER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTRAGMSAARQRGSAIGRPVKLTTQDVEVARGAIHGGSVTVQGAARDMGISRATLY  178
            LI ER+ AG  AAR RG   GRP KL  +D+ + + ++ + +  ++  A +  +SR+T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSRTTIY  178

Query  179  RALRR  183
            R L +
Sbjct  179  RYLNK  183

189) pinR in NC_022436


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 86/182 (48%), Positives = 127/182 (70%), Gaps = 2/182 (1%)

Query  1    MHIGYARVSTQDQHLALQRDALTAAGCERIYEDVVSGSREQRPGLERAMEMLRRGDTFVV  60
            M IGYARVST  Q+L LQ D L + GCE+I++D +SGS+ +RPGL++A+E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVAGLEARGVQFRSLTDGI--DTGGPAGRFFFHVMASLAQMEREL  118
            W+LDRLGR++ +L+ LV  L+ RGV F+SL + I  D ++++G+++FH+ A++A+ ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTragleaarrqgrrggrkrKMTDSKLDAAARLLATGMPPRDVARDLGISVPTLYRW  178
            I+ER+ AG  AAR +GR GGR  K+    L     L   G P + +A +  +S  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  LP  180
            L 
Sbjct  181  LN  182

190) tnpR in NC_019425


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 84/183 (46%), Positives = 131/183 (72%), Gaps = 4/183 (2%)

Query  1    MIFGYARVSTEDQNLNLQIDALTQHGIDKLFQEKVTGSKRDRPQLEDMIRGLRDGDSVVI  60
            M +GYARVST  QNLNLQ D L  HG +K+F++ ++GSK  RP L+  I   R GD++V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRISRSTKHLIELSETFEELGVNFISIQDNV--DTSTSMGRFFFRVMASLAELERDI  118
             +LDR++R+  +LI L + ++E GV+F S+++N+  D S+S G+++F++ A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TIERTKSGLEAARARGKKGGRPSK-ASQSIELALKMYDSKQYSIKQILEASKLSKTTLYR  177
             +ER+ +G  AARARG+ GGRP K   + + L   +YD+   +IK I E  K+S+TT+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  178  YLN  180
            YLN
Sbjct  180  YLN  182

191) CJA_1226 in NC_010995


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 81/193 (42%), Positives = 135/193 (70%), Gaps = 3/193 (1%)

Query  1    MKIGYARVSTddqnldlqadllRKDGCDKVFMEKMTGKAGSRPELTRLLGQLRAGDVLVV  60
            MKIGYARVST+ QNL+LQ D L  +GC+K+F + M+G  + RP L + +   R+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSLKHLIDILQELKARQIGFRCITDGI--DTETASGKLLFHIIGAIAEFEGVL  118
            W+LDRLGR++ +LI +++EL+ R ++F+ + + I  D  +++G+LLFH+++A+AEFE  L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ISERTKAGLQAARNRGKRIGRPPAIDAVQIDIARQLCASGKQSRADIAAQLNIGKTTLWR  178
            I ER+ AG  AAR RG+  GRP  ++  ++ + + L  +G   ++ IA Q ++++TT+ R
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTTIYR  179

Query  179  VMKKHPDEIIKNK  191
             ++K  ++  K+K
Sbjct  180  YLNKLNNQENKDK  192

192) SE451236_19955 in NC_021820


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

193) hin in NC_016856


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

194) STMMW_27391 in NC_016854


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

195) hin in NC_003197


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

196) hin in NC_016810


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

197) hin in NC_016857


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

198) STMDT12_C28260 in NC_016860


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

199) STU288_14035 in NC_021151


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

200) hin in NC_016863


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

201) CFSAN001921_03220 in NC_021814


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

202) mlr9265 in NC_002679


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (475),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 86/180 (48%), Positives = 126/180 (70%), Gaps = 2/180 (1%)

Query  17   IGYARVSTGDQETALQLDALRKAGCDRVFEDRASGVKTDRPGLGEAIRYVREGDTLTVWK  76
            IGYARVSTG Q+  LQ D L   GC+++F+D+ SG K+ RPGL+ AI + R GDT+ VW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  77   LDRLGRSMKHLIEIIAELEAKGVGFRSITENI--DTTTSGGSLVFHFFGALAQFERDLIR  134
            LDRLGR+M +LI ++ EL+ +GV+F+S+ ENI  D ++S G L+FH+F+A+A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  135  ERTraglqaarergrrggrqaVVTPEKLERARQLLAAGLNVREAAARVKIGKTALYEALK  194
            ER+ AG  AAR RGR GGR   +    L   + L   G  ++  A + K+++T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

203) SL003B_0703 in NC_015259


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (478),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 87/183 (48%), Positives = 134/183 (74%), Gaps = 3/183 (1%)

Query  1    MNIGYARVSTAEQNLTLQTDALEAAGCERVFVETASGAQRDRPELERALDFMRPGDTLVV  60
            M+IGYARVST+ QNL LQ D L++ GCE++F +  SG++  RP L++A++F R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLARSMRQLIDTVELLHSKGMGFLSMTEAI--DTTTAGGMLVFHIFGALAQFERAI  118
            W+LDRL+R+M +LI  V+ L+ +G++F S+ E I  D +++ G L+FH+F+A+A+FER +
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRErtragldaarargrkggrrPKLSQSDIRDARALLRDPEVSVAEVAKRLNVSPATLYR  178
            I ER+ AG  AARARGR GGR  KL++ D+   ++L  D   ++  +A + +VS +T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  179  HLP  181
             L 
Sbjct  180  YLN  182

204) SBOV27871 in NC_022241


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (478),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

205) SNSL254_A2967 in NC_011080


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (478),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

206) L083_1637 in NC_021191


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (477),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 88/185 (48%), Positives = 130/185 (71%), Gaps = 6/185 (3%)

Query  6    IGYARVSTREQSPALQHDALTAAGCARVFTDVASGARADRPQLAAVLDYLRPGDVLVVWQ  65
            IGYARVST  Q+  LQ+D L + GC ++F D  SG+++ RP L   +++ R+GD +VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  66   LDRLGRNMRHLIDTVNALHERDVQFRSLRENI--DTTTAAGRLVFHVFAALAEFERDLLR  123
            LDRLGRNM +LI  VN L+ER+V F+SL ENI  D ++++G+L+FH+FAA+AEFER+L+ 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  124  ERTSAGLEAIASrrargrrggrprKMTPEKIAVARQMYASQTFTVDQIARTLGVTRGTVY  183
            ER+SAG     + RARGR GGRP K+    +++ + +Y + T  +  IA    V+R T+Y
Sbjct  123  ERSSAG---RIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  184  AHLDR  188
              L++
Sbjct  179  RYLNK  183

207) Nmul_D2813 in NC_007617


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (477),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 87/185 (48%), Positives = 128/185 (70%), Gaps = 4/185 (2%)

Query  1    MKIGYARVSTddqnldlqldalTKAGCEQVFTDHGVSGATIEREGLSQAIAAVGKGDVLV  60
            MKIGYARVST+ QNL+LQ D L   GCE++F DH +SG+   R GL +AI     GD +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWKLDRLGRSLSFLIELIEKLRNEGAGFESLSDGI--DTTTAGGKLVFHIMGALAEFERS  118
            VW+LDRLGR++  LI L++ L + G +F+SL + I  D +++ G+L+FH+ +A+AEFER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERSKAGMQAARRRGKHIGRPHKLSREQISHAAQMIQEGRETVSGMAGLLSVDRATLY  178
            LI ERS AG  AAR RG+  GRP+KL++ +++    + ++G   +  +A    V R+T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNG-TPIKTIAEQWKVSRTTIY  178

Query  179  RALNR  183
            R LN+
Sbjct  179  RYLNK  183

208) Xfasm12_1562 in NC_010513


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (477),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 84/182 (47%), Positives = 125/182 (69%), Gaps = 2/182 (1%)

Query  1    MLIGYARVSTQDQNLELQCEALARAGCKKVFEEKVSGTRVERPGLAKTLEMLREGDTLVV  60
            M IGYARVST  QNL+LQ + L   GC K+F++ +SG++  RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKQLVDLVGELHKQGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV EL+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLEVAKQLgrkggrkrkMTDSKIESAKKLLASGVTPKDVAKNLGVSIPTLYRW  178
            I+ER+ AG   A+  GR GGR  K+    +   K L  +G   K +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  LP  180
            L 
Sbjct  181  LN  182

209) hin in NC_015710


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (477),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 82/179 (46%), Positives = 123/179 (69%), Gaps = 4/179 (2%)

Query  14   IGYARVSTFDQNPQLQIDALVDAGVDIRHLYEEKVSGSHLNRPRLKDALEFMKKGDVLIV  73
            IGYARVST  QN +LQ D L   G +   ++++ +SGS  +RP L  A+EF + GD ++V
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  74   WKLDRLGRSLQDLIGIIEDLKKRGIGFKSLTEGI--DTTTSGGMLIFHIFGSLAQFGREL  131
            W+LDRLGR+++DLI ++++L+ RG++F SL E I  D ++S G L+FH+F+++A+F R+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  132  TRERTLAGLEAARRQGRKGGRPRSLNNEQRETLKELIEQGKGVSHIARILNTSRFTVYR  190
              ER+ AG  AAR +GR GGRP  LN+ +   LK L ++G  +  IA   + SR T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

210) Shew_3862 in NC_009092


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 98/192 (52%), Positives = 146/192 (77%), Gaps = 4/192 (2%)

Query  4    KIGYARVSTDDQNLHLQRGALAAAGCEIIYEDKASGKNAARPELDNCLKALRPGDTLVVW  63
            KIGYARVST+ QNL+LQ + L + GCE I++D  SG ++ RP LD+ +   R+GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   RLDRLGRSLADLVNVVTHLVDERRVGFLSLQEQI--ETNSASGKLVFHVFAALAEFERNL  121
            RLDRLGR++ DL+ +V +L +ER V+F SL+E+I  + +S++G+L+FH+FAA+AEFERNL
Sbjct  62   RLDRLGRNMEDLITLVNEL-NERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  122  ISERTkagleaarargrlggrkpklqkkDIREIRALLKDGSIPVSDVARRYGVSRTTIYN  181
            I ER+ AG  AARARGR GGR  KL+K+D+  +++L  +G+ P+  +A +  VSRTTIY 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  182  HVGVVSVQNSRG  193
             +  ++ Q++++
Sbjct  180  YLNKLNNQENKD  191

211) SEEB0189_06320 in NC_021844


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINRHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +N+++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

212) Cyan7425_5431 in NC_011880


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 83/181 (46%), Positives = 124/181 (69%), Gaps = 2/181 (1%)

Query  1    MLIGYARVSTHDQNLDLQIEALTQAGCHKVFTDKSSGSRAERPGLAKALEMLRQGDSLVV  60
            M IGYARVST  QNL+LQ + L   GC+K+F D  SGS++ RPGL KA+E  R GD++VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKHLVDLVGELRQQDIQFKSLTDAI--DTATPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV EL ++++ F SL + I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEAARQLgrkggrkrrMTDSKIESAKKLLANGVPPRDVAKNLDISVPTLYRW  178
             +ER+ AG  AAR  GR GGR  ++    +   K L  NG P + +A +  +S  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  I  179
            +
Sbjct  181  L  181

213) LMOSLCC2755_p0037 in NC_014495


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 82/183 (45%), Positives = 131/183 (72%), Gaps = 4/183 (2%)

Query  1    MIFGYARVSTEDQNLNLQIDALTQHGIDKLFQEKVTGSKRDRPQLEDMIKGLREGDSVVI  60
            M +GYARVST  QNLNLQ D L  HG +K+F++ ++GSK  RP L+  I   R GD++V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRISRSTKHLIELSETFEELGVNFISIQDNV--DTSTSMGRFFFRVMASLAELERDI  118
             +LDR++R+  +LI L + ++E GV+F S+++N+  D S+S G+++F++ A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TIERTKSGLEAARARGKKGGRPSK-ASQSIELALKMYDSKEYSINQILDASKLSKTTLYR  177
             +ER+ +G  AARARG+ GGRP K   + + L   +YD+   +I+ I +  K+S+TT+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  178  YLN  180
            YLN
Sbjct  180  YLN  182

214) LMOSLCC2482_p0029 in NC_018888


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 82/183 (45%), Positives = 131/183 (72%), Gaps = 4/183 (2%)

Query  1    MIFGYARVSTEDQNLNLQIDALTQHGIDKLFQEKVTGSKRDRPQLEDMIKGLREGDSVVI  60
            M +GYARVST  QNLNLQ D L  HG +K+F++ ++GSK  RP L+  I   R GD++V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRISRSTKHLIELSETFEELGVNFISIQDNV--DTSTSMGRFFFRVMASLAELERDI  118
             +LDR++R+  +LI L + ++E GV+F S+++N+  D S+S G+++F++ A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TIERTKSGLEAARARGKKGGRPSK-ASQSIELALKMYDSKEYSINQILDASKLSKTTLYR  177
             +ER+ +G  AARARG+ GGRP K   + + L   +YD+   +I+ I +  K+S+TT+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  178  YLN  180
            YLN
Sbjct  180  YLN  182

215) LMOSLCC2372_p0028 in NC_018889


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 82/183 (45%), Positives = 131/183 (72%), Gaps = 4/183 (2%)

Query  1    MIFGYARVSTEDQNLNLQIDALTQHGIDKLFQEKVTGSKRDRPQLEDMIKGLREGDSVVI  60
            M +GYARVST  QNLNLQ D L  HG +K+F++ ++GSK  RP L+  I   R GD++V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRISRSTKHLIELSETFEELGVNFISIQDNV--DTSTSMGRFFFRVMASLAELERDI  118
             +LDR++R+  +LI L + ++E GV+F S+++N+  D S+S G+++F++ A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TIERTKSGLEAARARGKKGGRPSK-ASQSIELALKMYDSKEYSINQILDASKLSKTTLYR  177
             +ER+ +G  AARARG+ GGRP K   + + L   +YD+   +I+ I +  K+S+TT+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  178  YLN  180
            YLN
Sbjct  180  YLN  182

216) M643_p00290 in NC_022045


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 82/183 (45%), Positives = 131/183 (72%), Gaps = 4/183 (2%)

Query  1    MIFGYARVSTEDQNLNLQIDALTQHGIDKLFQEKVTGSKRDRPQLEDMIKGLREGDSVVI  60
            M +GYARVST  QNLNLQ D L  HG +K+F++ ++GSK  RP L+  I   R GD++V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRISRSTKHLIELSETFEELGVNFISIQDNV--DTSTSMGRFFFRVMASLAELERDI  118
             +LDR++R+  +LI L + ++E GV+F S+++N+  D S+S G+++F++ A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TIERTKSGLEAARARGKKGGRPSK-ASQSIELALKMYDSKEYSINQILDASKLSKTTLYR  177
             +ER+ +G  AARARG+ GGRP K   + + L   +YD+   +I+ I +  K+S+TT+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  178  YLN  180
            YLN
Sbjct  180  YLN  182

217) M641_15675 in NC_021828


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 82/183 (45%), Positives = 131/183 (72%), Gaps = 4/183 (2%)

Query  1    MIFGYARVSTEDQNLNLQIDALTQHGIDKLFQEKVTGSKRDRPQLEDMIKGLREGDSVVI  60
            M +GYARVST  QNLNLQ D L  HG +K+F++ ++GSK  RP L+  I   R GD++V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRISRSTKHLIELSETFEELGVNFISIQDNV--DTSTSMGRFFFRVMASLAELERDI  118
             +LDR++R+  +LI L + ++E GV+F S+++N+  D S+S G+++F++ A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TIERTKSGLEAARARGKKGGRPSK-ASQSIELALKMYDSKEYSINQILDASKLSKTTLYR  177
             +ER+ +G  AARARG+ GGRP K   + + L   +YD+   +I+ I +  K+S+TT+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  178  YLN  180
            YLN
Sbjct  180  YLN  182

218) tnpR in NC_013767


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 82/183 (45%), Positives = 131/183 (72%), Gaps = 4/183 (2%)

Query  1    MIFGYARVSTEDQNLNLQIDALTQHGIDKLFQEKVTGSKRDRPQLEDMIKGLREGDSVVI  60
            M +GYARVST  QNLNLQ D L  HG +K+F++ ++GSK  RP L+  I   R GD++V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRISRSTKHLIELSETFEELGVNFISIQDNV--DTSTSMGRFFFRVMASLAELERDI  118
             +LDR++R+  +LI L + ++E GV+F S+++N+  D S+S G+++F++ A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TIERTKSGLEAARARGKKGGRPSK-ASQSIELALKMYDSKEYSINQILDASKLSKTTLYR  177
             +ER+ +G  AARARG+ GGRP K   + + L   +YD+   +I+ I +  K+S+TT+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  178  YLN  180
            YLN
Sbjct  180  YLN  182

219) Mvol_0481 in NC_014222


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (475),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 87/186 (47%), Positives = 129/186 (70%), Gaps = 7/186 (3%)

Query  1    MKIGYARVSTKEQNIEKYIEELKKVGCEKIYFEKISGGKSERPEFNKMMETIRENDIVVV  60
            MKIGYARVST  QN++   + L+  GCEKI+ + +SG+KS RP ++K +E  R  D +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   SDLTRLSRSMKDLITTMELFKSKGVQLKSLKEAWI--DTTTAQGELMFNIFSALAEFERK  118
              L RL+R+M DLIT ++ ++ +GV + SL E  I  D +++ G+L+F++F+A+AEFER+
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIKERTKNGLDVARSRGRVGGRPKVDLGKVEMAI--KLYNSGECTLKEIKEITGVSKTTL  176
            LI ER+  G   AR+RGR GGRP   L K ++++   LY++G   +K I E   VS+TT+
Sbjct  120  LILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTI  177

Query  177  YRYLEK  182
            YRYL+K
Sbjct  178  YRYLNK  183

220) CFSAN001992_19675 in NC_020307


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINRHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +N+++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

221) SeSA_A2913 in NC_011094


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINRHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +N+++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

222) ST548_p3173 in NC_020181


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (475),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 86/191 (46%), Positives = 134/191 (71%), Gaps = 2/191 (1%)

Query  1    MLIGYARVSTGDQNLDLQKNALIRAECELIFEDTASGKNARRPGLKRALRRLRPGDVLVV  60
            M IGYARVSTG QNL+LQ + L    CE IF+D  SG +++RPGL +A+   R+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVRDLITLVSELQARGVNFRSLTDSI--DTSTPAGRFFFHVMSALAEMEREL  118
            W+LDRLGR++ DLITLV+EL+ RGV+F+SL ++I  D S+++G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLAAAREQgriggrrriMTTEVVDRCRRMLEKGATRQQVADVIGISEKTVYKY  178
            I+ER+ AG  AAR +GR GGR   +    +   + + ++G+  + +A+   +S  T+Y+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  FPSESGVPEKS  189
            +   +   +K 
Sbjct  181  LNKLNNQENKD  191

223) RHA1_ro03112 in NC_008268


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (476),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 83/188 (45%), Positives = 129/188 (69%), Gaps = 4/188 (2%)

Query  4    IGYARVSTLEQNPELQEHALREAGAIKIFTDYESGAKTARPELDKCLNYLRDNDGDVLVV  63
            IGYARVST  QN +LQE+ L   G  KIF D  SG+K+ RP LDK +++ R   GD +VV
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARS--GDTIVV  60

Query  64   WKLDRLGRSMRHVIETVHNLGERGIQFRSLTEGF--DTTTPGGEFLFHIMAALAQMERRM  121
            W+LDRLGR+M ++I  V++L ERG+ F+SL E +  D +++ G++LFH+ AA+A+ ER +
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  122  IIERTRAGLDAAARQGRHGGRPTVMNTDRIELARTMREQGKSLDAIAKSVGVGRSSVRRA  181
            I+ER+ AG  AA  +GR GGRP  +N   + L +T+ ++G ++ +IA    V+R+++ R 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  182  LDRSDPHA  189
            L++ + + 
Sbjct  181  LNKLNNQE  188

224) Oant_4685 in NC_009671


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (475),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 87/180 (49%), Positives = 125/180 (70%), Gaps = 2/180 (1%)

Query  4    IGYARVSTGDQDTALQLDALRKAGCEKVFEDKASGVKTDRPGLTEAVRYARDGDTLTVWR  63
            IGYARVSTG Q+  LQ D L   GCEK+F+D  SG K+ RPGL  A+ +AR GDT+ VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMKHLIEIVTELEAKGVGFRSITESI--DTTTFGGRLVFHLFGALAQFERDLIR  121
            LDRLGR+M +LI +V EL+ +GV+F+S+ E+I  D ++  G+L+FHLF+A+A+FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTraglqaaeergrrggrqaVVTPEKLAKARQHLASGLNVREAAARVKIGKTALYEALK  181
            ER+ AG  AA  RGR GGR   +    L+  +    +G  ++  A + K+++T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

225) SEEH1578_22675 in NC_021810


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (475),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINRHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +N+++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

226) SU5_03259 in NC_017623


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (475),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINRHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +N+++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

227) CFSAN002069_18405 in NC_021812


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (475),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINRHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +N+++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

228) SeHA_C2948 in NC_011083


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  130 bits (475),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 134/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINRHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +N+++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

229) pin in NC_013861


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 104/188 (56%), Positives = 147/188 (79%), Gaps = 4/188 (2%)

Query  1    MLIGYARVSTDDQNLNLQHDALKNAGCERIFDDQMTGSKIQRPGLDATLQFARSGDVIVV  60
            M IGYARVST+ QNLNLQ+D L+  GCE+IF+D+M+GSK +RPGLD +++FARSGD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WrldrlsrslkdlIEMVALLDSKKIGLRSLHESI--DTSSSSGKLIFHIFGALAEFERNL  118
            WRLDRL+R++ DLI +V  L+ + ++++SL+E+I  D SSS+G+L+FH+F+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTHaglqaarargrkggrPKKLSMDKAKLAIEIYNQKNHSIKQICDLMGISKPTLYK  178
            I ER+ AG  AARARGR GGRP KL+     L   +Y++   +IK I +   +S+ T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYR  179

Query  179  YI-KLSKQ  185
            Y+ KL++Q
Sbjct  180  YLNKLNNQ  187

230) cgR_0559 in NC_009342


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 98/181 (55%), Positives = 129/181 (72%), Gaps = 3/181 (1%)

Query  6    GYARVSTNDQDARLQHDALTKAGCYRIFTDTASGSLESRPELDKLLDQLRPGDTLVVWRL  65
            GYARVST  Q+  LQ+D L   GC +IF D  SGS   RP LDK ++  R+GDT+VVWRL
Sbjct  4    GYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRL  63

Query  66   DRLGRSIRHLIDQLATLQERGVEFRSLQENI--DTSSSGGRLVFHIFASLAEFERDLIRE  123
            DRLGR++ +LI  +  L+ERGV F+SL+ENI  D SSS G+L+FH+FA++AEFER+LI E
Sbjct  64   DRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILE  123

Query  124  RTNagleaarargrtggrPPSLSGDKLRTARKLYEQKDMTVAQIGEVLGVSRTTVYRALR  183
            R++AG  AARARGR GGRP  L+   L   + LY++ +  +  I+E   VSRTT+YR L 
Sbjct  124  RSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYRYLN  182

Query  184  R  184
            +
Sbjct  183  K  183

231) SJA_C1-05460 in NC_014006


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 98/184 (54%), Positives = 134/184 (73%), Gaps = 7/184 (3%)

Query  1    MKIGYARVSTAEQNLDLQRDALKAAGCEKVITDKASGATAARPGLEKVKELLRAGDTLVV  60
            MKIGYARVST+ QNL+LQ D L++ GCEK++ D  SG+ + RPGL+K  E+ R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WrldrlgrslrdlIGWMTYLDEEKVGLLSLHEAI--DTTTTSGKLTFHLFGALAEFERNL  118
            WRLDRLGR++ DLI  +  L+E  V++ SL+E I  D ++++G+L FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQAGLTAARARGKKGGRPAALGKDKRDLPV--RLYHENTMPIAKICSMLGISKPKL  176
            I ER+ AG  AARARG+ GGRP  L  +KRDL +   LY++ T PI  I     +S+  +
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKL--NKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTI  177

Query  177  YAYV  180
            Y Y+
Sbjct  178  YRYL  181

232) SLG_p_00300 in NC_015974


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 98/184 (54%), Positives = 134/184 (73%), Gaps = 7/184 (3%)

Query  1    MKIGYARVSTAEQNLDLQRDALKAAGCEKVITDKASGATAARPGLEKVKELLRAGDTLVV  60
            MKIGYARVST+ QNL+LQ D L++ GCEK++ D  SG+ + RPGL+K  E+ R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WrldrlgrslrdlIGWMTYLDEEKVGLLSLHEAI--DTTTTSGKLTFHLFGALAEFERNL  118
            WRLDRLGR++ DLI  +  L+E  V++ SL+E I  D ++++G+L FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQAGLTAARARGKKGGRPAALGKDKRDLPV--RLYHENTMPIAKICSMLGISKPKL  176
            I ER+ AG  AARARG+ GGRP  L  +KRDL +   LY++ T PI  I     +S+  +
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKL--NKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTI  177

Query  177  YAYV  180
            Y Y+
Sbjct  178  YRYL  181

233) CVAR_0973 in NC_015859


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 92/181 (51%), Positives = 134/181 (75%), Gaps = 3/181 (1%)

Query  6    GYARVSTADQDASLQRDALSRHGCSEIFTDVGSGSRAHRPELDRLWGKLRSGDTVVVWRL  65
            GYARVST+ Q+ +LQ D L+ HGC  IF D  SGS++ RP LD+     RSGDT+VVWRL
Sbjct  4    GYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRL  63

Query  66   DRLGRSVPHLIDQLEDLQTRGVGFVSLQETI--DTTTPGGRLVFHVFSALAQFERDLVIE  123
            DRLGR++ +LI  +++L+ RGV+F SL+E I  D +++ G+L+FH+F+A+A+FER+L++E
Sbjct  64   DRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILE  123

Query  124  rttaglaaarargrvggrPNKLTAQQTATARSLYEAKTMTVTDIGRVLGVSRSTIYRALD  183
            R++AG  AARARGR GGRP+KL  ++ +  ++LY+  T  +  I+    VSR+TIYR L+
Sbjct  124  RSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRYLN  182

Query  184  S  184
             
Sbjct  183  K  183

234) YSA_03464 in NC_017986


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (474),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 91/183 (50%), Positives = 131/183 (72%), Gaps = 3/183 (1%)

Query  4    RIGYARVSTDDQNLDLQRDALALAGCSTVYEETMSGKSADRPELGHCLKALRSGDTLVVW  63
            +IGYARVST+ QNL+LQ D L   GC  ++++ MSG  + RP L+  +   RSGDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   RLDRLGRSLPDLVGIVSSLEREGVAFESMTERI--ETTSAAGKLIFHVFAALAEFERNLI  121
            RLDRLGR++ DL+ +V+ L+  GV+F+S+ E I  + +S++G+L+FH+FAA+AEFERNLI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  rertraglaaarargrnggrKPALDDRQVRAIRALLRDPEIQVTDVARRYGVSRTTLYRY  181
             ER+ AG  AARARGR GGR   L+ R++  +++L  D    +  +A +  VSRTT+YRY
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYRY  180

Query  182  VGS  184
            +  
Sbjct  181  LNK  183

235) XALc_1566 in NC_013722


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (474),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 87/179 (49%), Positives = 132/179 (74%), Gaps = 3/179 (1%)

Query  4    RIGYARVSIDDQHLDLQRDALTQAGCGAIYEEAIGGKNVARPELEQCRKALRAGDTLVVW  63
            +IGYARVS + Q+L+LQ D L   GC  I+++ ++G +  RP L++     R+GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   RLDRLGRSLPDLVQIVADLEQQGVGFESLTEKI--ETGSAAGKLVFHVFAALAEFERGLI  121
            RLDRLGR++ DL+ +V +L+++GV+F+SL E+I  + +S++G+L+FH+FAA+AEFER LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  RERTQaglaaarargrvggrKPKLDDQQVREIKALLRDPDIQVADVARRYGVSRTTIYK  180
             ER+ AG  AARARGR GGR  KL+ +++  +K+L  D +  +  +A +  VSRTTIY+
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

236) PAJ_2645 in NC_017531


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 85/188 (46%), Positives = 129/188 (69%), Gaps = 2/188 (1%)

Query  13   MLIGYVRVSTNDQNTDLQRNALQSANCEQIFEDKISGKTSERPGLKRALRTLKEGDTLVV  72
            M IGY RVST  QN +LQ + L++  CE+IF+D +SG  S RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  73   WKLDRLGRSMRHLVMLTEELRERGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  130
            W+LDRLGR+M +L+ L +EL ERGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  131  IVERTRAGLTAAREKgriggrrriMTPEVVARAERMMANGATLHQVALVLDVSTKTIYRY  190
            I+ER+ AG  AAR +GR GGR   +    ++    +  NG+ +  +A    VS  TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  191  IPAPKQHH  198
            +   ++++
Sbjct  181  LNKLNNQE  188

237) rinQ in NC_011983


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (474),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 84/193 (44%), Positives = 130/193 (68%), Gaps = 4/193 (2%)

Query  1    MRIGYARVSTEDQKMDLQLNALGEAGCDHVFTDHGVSGAGFERPGLEDVMKALQRGDTLV  60
            M+IGYARVST  Q+++LQ + L   GC+ +F DH +SG+   RPGL+  +   + GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRSLVRLVQFVDELGKRGIEFRSLSENI--DTTSSGGRLVFHLIAALSEFERA  118
            VWRLDRLGR++  L+ +V+EL  RG+ F+SL ENI  D +SS G+L+FHL+AA++EFER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTRAGMDAARRKGLHLGRRPVLTTQQQKAAYRAVRVDGQTIPAVAKHYNVDPRTIR  178
            LI ER+ AG  AAR +G + G RP    +++ +  +++  +G  I ++A + +V   TI 
Sbjct  120  LILERSSAGRIAARARG-RYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  179  RIVNQKETKARTE  191
            R +N+ + +   +
Sbjct  179  RYLNKLNNQENKD  191

238) Bcep1808_7192 in NC_009227


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 69/167 (42%), Positives = 115/167 (69%), Gaps = 2/167 (1%)

Query  6    SVRPQTLSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVVWKLDRLGRSVKQLVD  65
            +++ + L+  GC K+F+D +SG+++ RPGL K++E  R GDT+VVW+LDRLGR++ +L+ 
Sbjct  16   NLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLIT  75

Query  66   LVGDLHKHGVQFRSLTDSI--DTGTPSGRFFFHVMASLAEMERELTVERTRAGLEVAKQL  123
            LV +L+ +GV F+SL ++I  D ++++G+++FH+ A++AE ER+L +ER+ AG   A+  
Sbjct  76   LVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARAR  135

Query  124  GRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYRWVP  170
            GR GGR  K+    +   K L  +G P K +A +  VS  T+YR + 
Sbjct  136  GRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

239) SPAB_03441 in NC_010102


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 83/179 (47%), Positives = 133/179 (75%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNIDLQRNALTCANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IGY RVST  QN++LQ + L    C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINRHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +N+++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

240) Q7S_25766 in NC_017773


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 87/191 (46%), Positives = 136/191 (72%), Gaps = 1/191 (0%)

Query  4    IGYARVSTDNQHIDLQNDALRSAGCERIFDDVISGSKNERPGLDAALAYLREGDILVVWK  63
            IGYARVST+ Q+++LQ+D L + GCE+IF+D +SGSK+ RPGLD A+ + R GD +VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMAHLVNTVQELSVRGVGLKVLTGQGAAIDTTTAPGKLVFGIFAALAEFERDLI  123
            LDRLGR+M +L+  V+EL+ RGV++  L  +  ++D +++ G+L+F +FAA+AEFER+LI
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  124  RErtkaglsaaaargrkggrkPVVTDEGLQKAQSLMAQGLSVREAAGRLKIGKTALYDAL  183
             ER+ AG  AA ARGR GGR   +   +L   ++L  +G +++  A + K+++T++Y  L
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  184  RAFKNVGNDSS  194
              ++N  N   
Sbjct  182  NKLNNQENKDK  192

241) STY1643 in NC_003198


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 95/191 (50%), Positives = 136/191 (72%), Gaps = 4/191 (2%)

Query  1    MQIGYIRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSARPGLKKLLRTLSEGDTLVV  60
            M+IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +     GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLITLIEELREKGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LITL++EL E+GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTLAGLEaaraqgriggrrPKLTKEQHEQIARLIKNGYSRKQLAIIYDIGISTIYRY  178
            I+ER+ AG  AARA+GR GGR  KL K +   +  L  NG + K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  HPVEELQTQAE  189
              ++ L+ Q +
Sbjct  181  --LNKLNNQEN  189

242) t1346 in NC_004631


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 95/191 (50%), Positives = 136/191 (72%), Gaps = 4/191 (2%)

Query  1    MQIGYIRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSARPGLKKLLRTLSEGDTLVV  60
            M+IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +     GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLITLIEELREKGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LITL++EL E+GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTLAGLEaaraqgriggrrPKLTKEQHEQIARLIKNGYSRKQLAIIYDIGISTIYRY  178
            I+ER+ AG  AARA+GR GGR  KL K +   +  L  NG + K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  HPVEELQTQAE  189
              ++ L+ Q +
Sbjct  181  --LNKLNNQEN  189

243) XF2028 in NC_002488


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 85/179 (48%), Positives = 124/179 (70%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLDLQIDALTKAGCQKLFNDKISGSNKERPGLTKTLEMLREGDTLVV  60
            M IGYARVST  QNL+LQ D L   GC+K+FND +SGS+  RPGL K++E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKNLVDLVGDLHKQGVQFKSLTDAI--DTGTPSGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV +L+ +GV F SL + I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  MVERTRAGLEVArklgrkggrklkMTESKVESAKKLLASGMAPRDVARNLGVSIPTLYR  177
            ++ER+ AG   AR  GR GGR  K+    +   K L  +G + + +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

244) pin in NC_003922


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 125/186 (68%), Gaps = 2/186 (1%)

Query  4    IGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRNGDVLAVWR  63
            IGYARVST+ Q+  LQ D L   GCE++F+D  SG+K+ RPGL  A+ + R+GD + VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMPHLIETIGALEARGVGFRSLTEAI--DTTTPGGRLIFHVFGALGQFERDLIR  121
            LDRLGR+M +LI  +  L+ RGV+F+SL E I  D +++ G+L+FH+F+A+++FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ErtkaglsaaaargrkggrkPVITADKLQQARKHIANGINVREAATRLKVSKTALYAALQ  181
            ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  STSAGD  187
              +  +
Sbjct  183  KLNNQE  188

245) XAC29_22439 in NC_020797


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 125/186 (68%), Gaps = 2/186 (1%)

Query  4    IGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRNGDVLAVWR  63
            IGYARVST+ Q+  LQ D L   GCE++F+D  SG+K+ RPGL  A+ + R+GD + VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMPHLIETIGALEARGVGFRSLTEAI--DTTTPGGRLIFHVFGALGQFERDLIR  121
            LDRLGR+M +LI  +  L+ RGV+F+SL E I  D +++ G+L+FH+F+A+++FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ErtkaglsaaaargrkggrkPVITADKLQQARKHIANGINVREAATRLKVSKTALYAALQ  181
            ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  STSAGD  187
              +  +
Sbjct  183  KLNNQE  188

246) cin in NC_016619


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 81/187 (44%), Positives = 124/187 (67%), Gaps = 2/187 (1%)

Query  4    IGYARVSTADQDPALQLDALTKAGCARVFEDKASGAKTDRlglaaalaflREGDVLVVWK  63
            IGYARVST+ Q+  LQ D L   GC ++F+D  SG+K+ R GL  A+ F R GD +VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSLPHLIETVTALEGRGVGFRSLTETI--DTTTPGGRLIFHIFGALGQFECDLIR  121
            LDRLGR++ +LI  V  L+ RGV+F+SL E I  D +++ G+L+FH+F+A+++FE +LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTRAGLDAAVARSRRGGRKPVVTEEKLRRARMLIAQGLTVREAAARIKVGKTALYAALG  181
            ER+ AG  AA AR+R GGR   +    L   + L  +G  ++  A + KV++T++Y  L 
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  EASSDAS  188
              +++ +
Sbjct  183  KLNNQEN  189

247) pin in NC_003921


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  128 bits (467),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 85/181 (47%), Positives = 123/181 (68%), Gaps = 2/181 (1%)

Query  4    IGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRNGDVLAVWR  63
            IGYARVST+ Q+  LQ D L   GCE++F+D  SG+K+ RPGL  A+ + R+GD + VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMPHLIETIGALEARGVGFRSLTEAI--DTTTPGGRLIFHVFGALGQFERDLIR  121
            LDRLGR+M +LI  +  L+ RGV+F+SL E I  D +++ G+L+FH+F+A+++FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ErtkaglsaaaargrkggrkPVITADKLQQARKHIANGINVREAATRLKVSKTALYAALQ  181
            ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  S  182
             
Sbjct  183  K  183

248) XAC29_22824 in NC_020801


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  128 bits (467),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 85/181 (47%), Positives = 123/181 (68%), Gaps = 2/181 (1%)

Query  4    IGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRNGDVLAVWR  63
            IGYARVST+ Q+  LQ D L   GCE++F+D  SG+K+ RPGL  A+ + R+GD + VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMPHLIETIGALEARGVGFRSLTEAI--DTTTPGGRLIFHVFGALGQFERDLIR  121
            LDRLGR+M +LI  +  L+ RGV+F+SL E I  D +++ G+L+FH+F+A+++FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ErtkaglsaaaargrkggrkPVITADKLQQARKHIANGINVREAATRLKVSKTALYAALQ  181
            ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  S  182
             
Sbjct  183  K  183

249) A225_R1p0425 in NC_018107


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  128 bits (467),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 85/187 (46%), Positives = 125/187 (67%), Gaps = 2/187 (1%)

Query  47   IGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRDGDVLAVWR  106
            IGYARVST+ Q+  LQ D L   GCE++F+D  SG+K+ RPGL  A+ + R GD + VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  107  LDRLGRSMPHLIETIGALEARGVGFRSLTEAI--DTTTPGGRLIFHVFGALGQFERDLIR  164
            LDRLGR+M +LI  +  L+ RGV+F+SL E I  D +++ G+L+FH+F+A+++FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  165  ErtkagltaaaargrkggrkPVVTADKLQRAREHIANGLNVREAATRLKVSKTALYTALQ  224
            ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  225  STSAADS  231
              +  ++
Sbjct  183  KLNNQEN  189

250) G432_19965 in NC_020542


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  127 bits (465),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 121/185 (66%), Gaps = 3/185 (1%)

Query  5    LGYARVSTGDQDVAGQTMRLEKAGAIKIFTDVISGKSMERPGLAELIAYARKGDTLAVVR  64
            +GYARVSTG Q++  Q  RL+  G  KIF D +SG    RPGL   I +AR GDT+ V R
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSLAELLTTVETLRGQGIALLSLEEKI--DTSSAAGELIFHVFGAIAHFERRLIS  122
            LDRLGR++ +L+T V+ L  +G+++ SLEE+I  D SS++G+L+FH+F+A+A+FER LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTRDGIAAARAKGKQPGR-QPLDMSKVDAAIKLVEARISPTEAARQLGIGRSTIYREMR  181
            ER+  G  AARA+G+  GR + L+   +     L +   +    A Q  ++R+TIYR + 
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  RMGIE  186
            ++  +
Sbjct  183  KLNNQ  187

251) SCD19.06 in NC_003888


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  127 bits (465),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 69/167 (42%), Positives = 117/167 (71%), Gaps = 1/167 (0%)

Query  1    MQRDTLTAAGCARTFEDKASGKNADRPELRSALDYARAGDTLCVWKLDRFARSLIDLVTM  60
            +Q D L + GC + F+D  SG ++ RP L  A+++AR+GDT+ VW+LDR++R++ DL+T+
Sbjct  17   LQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITL  76

Query  61   VDTLRERGIGFKVLTGALANIDPGTADGRLMLQVVGAMAEFERSLIKERTRAGLDAAKAQ  120
            V+ L ERG++F  L   ++ +D +++ G+L++++ +A AEFER+LI ER+ AG  AA+A+
Sbjct  77   VNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARAR  135

Query  121  GRTGGRPSVVNEDVLTVARARKAKRESVSAVAKALGVSRATLYRHLA  167
            GR GGRP  +N   LT+ ++   +  ++ ++A    VSR+T+YR L 
Sbjct  136  GRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

252) G432_19250 in NC_020542


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  127 bits (465),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 97/184 (53%), Positives = 134/184 (73%), Gaps = 7/184 (3%)

Query  1    MKIGYARVSTAEQNLDLQRDALKAAGCEKVITDKASGATAARPGLEKVKELLRAGDTLVV  60
            MKIGYARVST+ QNL+LQ D L++ GCEK++ D  SG+ + RPGL+K  E+ R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WrlgrlgrslrdligWMTYLDEEKVGLLSLHEAI--DTTTTSGKLTFHLFGALAEFERNL  118
            WRL+RLGR++ DLI  +  L+E  V++ SL+E I  D ++++G+L FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQAGLTAARARGKKGGRPAALGKDKRDLPV--RLYHENTMPIAKICSMLGISKPKL  176
            I ER+ AG  AARARG+ GGRP  L  +KRDL +   LY++ T PI  I     +S+  +
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKL--NKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTI  177

Query  177  YAYV  180
            Y Y+
Sbjct  178  YRYL  181

253) UMNK88_1004 in NC_017641


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  127 bits (465),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 92/180 (52%), Positives = 130/180 (73%), Gaps = 2/180 (1%)

Query  1    MQIGYIRVSTNDQNTDLQRNALNSAGCELIFEDKISGTKSARPGLKKLLRTLSAGDTLVV  60
            M+IGY RVST  QN +LQ + LN+ GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLITLIEELRKKGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LITL++EL  +GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTLaglaaaraqgriggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYDIGISTIYRY  178
            I+ER+ AG  AARA+GR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

254) B479_27024 in NC_019906


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  127 bits (464),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 85/187 (46%), Positives = 125/187 (67%), Gaps = 2/187 (1%)

Query  4    IGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRDGDVLAVWR  63
            IGYARVST+ Q+  LQ D L   GCE++F+D  SG+K+ RPGL  A+ + R GD + VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMPHLIETIGALEARGVGFRSLTEAI--DTTTPGGRLIFHVFGALGQFERDLIR  121
            LDRLGR+M +LI  +  L+ RGV+F+SL E I  D +++ G+L+FH+F+A+++FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ErtkagltaaaargrkggrkPVVTADKLQRAREHIANGLNVREAATRLKVSKTALYTALQ  181
            ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  STSAADS  188
              +  ++
Sbjct  183  KLNNQEN  189

255) XCAW_b00030 in NC_020817


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  127 bits (464),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 125/186 (68%), Gaps = 2/186 (1%)

Query  52   IGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRNGDVLAVWR  111
            IGYARVST+ Q+  LQ D L   GCE++F+D  SG+K+ RPGL  A+ + R+GD + VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  112  LDRLGRSMPHLIETIGALEARGVGFRSLTEAI--DTTTPGGRLIFHVFGALGQFERDLIR  169
            LDRLGR+M +LI  +  L+ RGV+F+SL E I  D +++ G+L+FH+F+A+++FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  170  ErtkaglsaaaargrkggrkPVITADKLQQARKHIANGINVREAATRLKVSKTALYAALQ  229
            ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  230  STSAGD  235
              +  +
Sbjct  183  KLNNQE  188

256) pin in NC_014544


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  127 bits (464),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 104/188 (56%), Positives = 147/188 (79%), Gaps = 4/188 (2%)

Query  1    MLIGYARVSTDDQNLNLQHDALKNAGCERIFDDQMTGSKIQRPGLDATLQFARSGDVIVV  60
            M IGYARVST+ QNLNLQ+D L+  GCE+IF+D+M+GSK +RPGLD +++FARSGD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WrldrlsrslkdlIEMVALLDSKKIGLRSLHESI--DTSSSSGKLIFHIFGALAEFERNL  118
            WRLDRL+R++ DLI +V  L+ + ++++SL+E+I  D SSS+G+L+FH+F+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTHaglqaarargrkggrPKKLSMDKAKLAIEIYNQKNHSIKQICNLMGISKPTLYK  178
            I ER+ AG  AARARGR GGRP KL+     L   +Y++   +IK I +   +S+ T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYR  179

Query  179  YI-KLSKQ  185
            Y+ KL++Q
Sbjct  180  YLNKLNNQ  187

257) E2348C_1831 in NC_011601


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  127 bits (464),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 93/180 (52%), Positives = 129/180 (72%), Gaps = 2/180 (1%)

Query  1    MQIGYIRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSARPGLKKLLRTLSEGDTLVV  60
            M+IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +     GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLITLIEELREKGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LITL++EL E+GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTLaglaaaraqgriggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYDIGISTIYRY  178
            I+ER+ AG  AARA+GR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

258) XACM_2281 in NC_016010


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  127 bits (464),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 88/188 (47%), Positives = 133/188 (71%), Gaps = 3/188 (1%)

Query  4    RIGYARVSTDDQHLDLQRDALTQAGCSVIYEEAASGKSAIRPELEQCRKALRAGDTLVVW  63
            +IGYARVST+ Q+L+LQ D L   GC  I+++  SG  + RP L++     R+GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   RLDRLGRSLPDLVQIVADLERQCVGFESLTEKI--ETGSAAGKLVFHVFAALAEFERGLI  121
            RLDRLGR++ DL+ +V +L+ + V+F+SL E+I  + +S++G+L+FH+FAA+AEFER LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  RERTQaglaaarargraggrrPKLDEQQVREIKVLLRDPGIQVADVARRYGVSRTTLYKH  181
             ER+ AG  AARARGR GGR  KL+ +++  +K L  D G  +  +A +  VSRTT+Y+ 
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYRY  180

Query  182  VGVIAPRQ  189
            +  +  ++
Sbjct  181  LNKLNNQE  188

259) XALr_3242 in NC_017555


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  127 bits (464),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 86/190 (46%), Positives = 136/190 (72%), Gaps = 3/190 (1%)

Query  1    MRIGYARVSTDDQNLDLQRDALCGAGCIEIYEETASGRRADRPELAQCLRALRAGDTLVV  60
            M+IGYARVST+ QNL+LQ D L   GC  I+++  SG ++ RP L + +   R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLADLVGIVEGLRHRGVGFESLNERI--DTTHAAGEMIFHVFAMLAQYERSL  118
            WRLDRLGR++ DL+ +V+ L +RGV+F+SL+E I  D + ++G+++FH+FA +A++ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IrertraglaaarargrkggraaKLDTRQIREIRALLRDPEVRVTDVAKRYSVSRATLYK  178
            I ER+ AG  AARARGR GGR+ KL+ R++  +++L  D    +  +A +  VSR+T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  179  HVGAVRATNQ  188
             +  +   ++
Sbjct  180  YLNKLNNQEN  189

260) Bcep1808_0273 in NC_009256


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (462),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 95/179 (54%), Positives = 133/179 (75%), Gaps = 3/179 (1%)

Query  4    RIGYASVSTDDQNLDLQRDALHLAGVESIYEEATRGKTAVRPELDHCLKALRAGDTLVVW  63
            +IGYA VST+ QNL+LQ D L+  G E I+++   G  + RP LD  +   R+GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   RLDRLGRSLHDLVQIVACLEEKGIGFGSLTEKI--ETSSAAGKLVIHVFAALAEFERNLI  121
            RLDRLGR+++DL+ +V  L+E+G++F SL E+I  + SS++G+L++H+FAA+AEFERNLI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  RERTraglsaarargraggrKPKLDARQIREIKRLMSDPAIPVSQIAERYKVSRTTIYK  180
             ER+ AG  AARARGR GGR  KL+ R++  +K L  D + P+  IAE+ KVSRTTIY+
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTL-YDNGTPIKTIAEQWKVSRTTIYR  179

261) resR in NC_015710


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 95/183 (52%), Positives = 131/183 (72%), Gaps = 4/183 (2%)

Query  1    MKFGYARTSKLEQNLDLQIDELKKAGCERIITDKISGSVAERPGLAKLKEQLRPKEDVVV  60
            MK+GYAR S   QNL+LQ D L+  GCE+I+ D +SGS + RPGL K  E  R+  D +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARS-GDTIV  59

Query  61   VWRLDRLGRSLKHLIDWFIELEKNGIEFQSLHEKI--DTSSPTGKLIFHLFGALAEFEKN  118
            VWRLDRLGR++ +LI    EL+  G+ F+SL+E+I  D SS+TG+L+FHLF+A+AEFE+N
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIQERTQaglaaarargrlggrPKRLDSAKRSLVVKLYKDKESTVKEICNMMGISKPTLY  178
            LI ER+ AG  AARARGR GGRP +L+    +L+  LY D+ + +K I +   +S+ T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIY  178

Query  179  KYL  181
            +YL
Sbjct  179  RYL  181

262) Tint_3248 in NC_014155


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (462),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 86/180 (48%), Positives = 123/180 (69%), Gaps = 2/180 (1%)

Query  4    IGYARVSTAEQDTALQVDALHKAGCERIFEDTASGAKTDRPGLADALAYLRDGDVLAVWR  63
            IGYARVST+ Q+  LQ D L+  GCE+IF+D  SG+K+ RPGL  A+ + R GD + VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMPHLIETIGALEARGVGFRSLTEAI--DTTTPGGRLIFHVFGALGQFERDLIR  121
            LDRLGR+M +LI  +  L+ RGV+F+SL E I  D +++ G+L+FH+F+A+++FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ErtkagltaaaargrkggrkPVVTADKLQRAREHMANGLNVRETAARLKVSKTALYAALQ  181
            ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

263) finB in NC_006873


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 86/184 (47%), Positives = 126/184 (69%), Gaps = 8/184 (4%)

Query  4    IGYARVSTREQNLDLQLDALKEAGCKLIFEEKVSGVKD-RPELDKALAYLREGDTFVIWK  62
            IGYARVST  QNL+LQ D L+  GC  IF++ +SG K  RP LDKA+ + R GDT+V+W+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  63   LDRLGRSLKDLVYIVDCLQKRKVAFKSIVDGI--DTNSALGRCQFGIFASLAEYEREIIV  120
            LDRLGR++ DL+ +V+ L+ R V+F S+ + I  D +S+ G+  F +FA++AE+ER++I+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  121  ERTRAGLQAAKERGKLTGRPIGLSEDAKRKAIAAKRLYENRDYSIDEICRILHIGSKATL  180
            ER+ AG  AA+ RG+  GRP  L+   KR     K LY+N + +I  I     + S++T+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLN---KRDLTLLKTLYDN-GTPIKTIAEQWKV-SRTTI  177

Query  181  YRYL  184
            YRYL
Sbjct  178  YRYL  181

264) BURPS1710b_2172 in NC_007434


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 79/170 (47%), Positives = 117/170 (69%), Gaps = 12/170 (7%)

Query  11   MRIGYARVSTEEQCLALQEDALTRAGCDLIFSDHGISGTNFCRPGLDQALQHLGRGDTLV  70
            M+IGYARVST  Q L LQED L   GC+ IF+DH +SG++  RPGLD+A++    GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  71   VWRLDRLGRSLTKLVDMIDLLGQRDIHFESLTESI--NTQSPSGTLIFHIIAALAQFERA  128
            VWRLDRLGR++  L+ +++ L +R++ F+SL E+I  +  S++G L+FH++AA+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  129  LISERTRAGLAAAKNRGVRVGRPRSLTE---------YQASQAIRLLSER  169
            LI ER+ AG  AA+ RG   GRP  L           Y+ + +I+ ++E+
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQ  169

265) BPSL1696 in NC_006350


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 79/170 (47%), Positives = 117/170 (69%), Gaps = 12/170 (7%)

Query  11   MRIGYARVSTEEQCLALQEDALTRAGCDLIFSDHGISGTNFCRPGLDQALQHLGRGDTLV  70
            M+IGYARVST  Q L LQED L   GC+ IF+DH +SG++  RPGLD+A++    GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  71   VWRLDRLGRSLTKLVDMIDLLGQRDIHFESLTESI--NTQSPSGTLIFHIIAALAQFERA  128
            VWRLDRLGR++  L+ +++ L +R++ F+SL E+I  +  S++G L+FH++AA+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  129  LISERTRAGLAAAKNRGVRVGRPRSLTE---------YQASQAIRLLSER  169
            LI ER+ AG  AA+ RG   GRP  L           Y+ + +I+ ++E+
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQ  169

266) GBP346_A2075 in NC_012695


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 79/170 (47%), Positives = 117/170 (69%), Gaps = 12/170 (7%)

Query  11   MRIGYARVSTEEQCLALQEDALTRAGCDLIFSDHGISGTNFCRPGLDQALQHLGRGDTLV  70
            M+IGYARVST  Q L LQED L   GC+ IF+DH +SG++  RPGLD+A++    GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  71   VWRLDRLGRSLTKLVDMIDLLGQRDIHFESLTESI--NTQSPSGTLIFHIIAALAQFERA  128
            VWRLDRLGR++  L+ +++ L +R++ F+SL E+I  +  S++G L+FH++AA+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  129  LISERTRAGLAAAKNRGVRVGRPRSLTE---------YQASQAIRLLSER  169
            LI ER+ AG  AA+ RG   GRP  L           Y+ + +I+ ++E+
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQ  169

267) HDEF_1047 in NC_012751


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 120/179 (68%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTQDQNLALQIEALTKAGCKKIFEDKSSVSRAQRPGLVKVLEILREGDTLVV  60
            M IGYARVST  QNL LQ + L   GC KIF+D  S S+++RPGL K +E+ R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKNLVDLVGELHKQNIQFKSLTDAI--DTGTASGRFFFHVMASLAEMEREL  118
            W+LDRLGR++ +L+ LV EL+ + + F SL + I  D ++++G+++FH+ A++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TVERTRAGLEVARQLgrkggrkrkMTDSKIESAKKLLANGIPPRDVAKNLGVSVPTLYR  177
             +ER+ AG   AR  GR GGR  K+    +   K L  NG P + +A +  VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

268) Pnap_4123 in NC_008757


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 82/182 (46%), Positives = 124/182 (69%), Gaps = 2/182 (1%)

Query  1    MLIGYARVSTLDQHLDLQMDALTQAGCHRLFDDKMSGSRAERPGLAKALDMLREGDTLVV  60
            M IGYARVST  Q+L+LQ D L   GC+++F+D MSGS++ RPGL KA++  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVKRLVDLVGQLHRQGVHLKSLTDAI--DTGTPSGRFFFHVMTSLAEMEREL  118
            W+LDRLGR++  L+ LV +L+ +GV + SL + I  D ++++G+++FH+ +++AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TAERTRAGLEVARQLgrkggrkrkMTDSKIASAKKLLASGVPPRDVAKNLGVSVPTLYRW  178
              ER+ AG   AR  GR GGR  K+    ++  K L  +G P + +A +  VS  T+YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  IP  180
            + 
Sbjct  181  LN  182

269) pin in NC_012809


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 131/185 (71%), Gaps = 4/185 (2%)

Query  1    MLIGYARVSTEDQNLDLQRDALKAAGCTRIFEEKESGRAGTKRPALEAALDFLRAEDQLV  60
            M IGYARVST  QNL+LQ D L++ GC +IF++  SG + +KRP+L+ A++F R+ D +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSG-SKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWKIDRLGRSLREMLDTAHMLQERGVKLRSLTEQV--DTETATGRMMFNFLGTIAEYFLD  118
            VW++DRLGR++ +++   + L+ERGV ++SL E++  D  ++TG+++F++++++AE+  +
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LNRERTLAGLKAAVARGRKGGRPRKITDADLEAGRAMLAAGTIPVAEIARRLGVSRKTFY  178
            L  ER+ AG  AA ARGR GGRP K+   DL   +++   GT P+  IA +  VSR T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  179  LYFPQ  183
             Y+ +
Sbjct  179  RYLNK  183

270) RAF_pORF1262 in NC_012634


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 122/184 (67%), Gaps = 5/184 (2%)

Query  1    MLIGYARVSTLDQNPNHQIDALNEAGCKKIFTEKISGASKQRTQLQAALDYMREGDTLVV  60
            M IGYARVST  QN N Q D LN  GC KIF + +SG+  +R  L+ A+++ R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLSRLARSLTQIISTLKILEEKKISLHVITQSI--DTSTAEGRLFFHMNAAFDQFQREI  118
            W+L RL+R++ ++I+ ++ L+E+ +S+H + ++I  D S++ G+L+FH+ AAF +F+R++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVENTKTGLKSARRNGRIGGRPKFMSDEKMRTAKAMLKDNENYPFISDIIKTLDIGRTTF  178
            I+E + +G  +AR  GR GGRP  ++   +   K++  +      I  I     ++RTT+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTP---IKTIAEQWKVSRTTI  177

Query  179  YRYF  182
            YRY+
Sbjct  178  YRYL  181

271) CVAR_2792 in NC_015859


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (463),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 90/181 (50%), Positives = 132/181 (73%), Gaps = 3/181 (1%)

Query  6    GYARVSTANQDASLQRDALSRYGCSEIFTDVGSGSRAHRPELDRLWDRLRHGDTVVVWRL  65
            GYARVST+ Q+ +LQ D L+  GC  IF D  SGS++ RP LD+  +  R GDT+VVWRL
Sbjct  4    GYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRL  63

Query  66   DRLGRSVPHLIDQLEDLQTRGVGFVSLQETI--DTTTPGGRLVFHVFSALAQFERDLVIE  123
            DRLGR++ +LI  +++L+ RGV+F SL+E I  D +++ G+L+FH+F+A+A+FER+L++E
Sbjct  64   DRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILE  123

Query  124  RTTaglaaarargrvggrprKLTAQQTATARSLYEAKTMTVTDIGRVLGVSRSTIYRALD  183
            R++AG  AARARGR GGRP KL  ++ +  ++LY+  T  +  I+    VSR+TIYR L+
Sbjct  124  RSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRYLN  182

Query  184  S  184
             
Sbjct  183  K  183

272) STBHUCCB_14330 in NC_016832


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (463),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 95/191 (50%), Positives = 136/191 (72%), Gaps = 4/191 (2%)

Query  56   MQIGYIRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSARPGLKKLLRTLSEGDTLVV  115
            M+IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +     GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  116  WKLDRLGRSMKHLITLIEELREKGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  173
            W+LDRLGR+M +LITL++EL E+GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  174  IVERTLAGLEaaraqgriggrrPKLTKEQHEQIARLIKNGYSRKQLAIIYDIGISTIYRY  233
            I+ER+ AG  AARA+GR GGR  KL K +   +  L  NG + K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  234  HPVEELQTQAE  244
              ++ L+ Q +
Sbjct  181  --LNKLNNQEN  189

273) TY21A_06825 in NC_021176


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (463),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 95/191 (50%), Positives = 136/191 (72%), Gaps = 4/191 (2%)

Query  56   MQIGYIRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSARPGLKKLLRTLSEGDTLVV  115
            M+IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +     GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  116  WKLDRLGRSMKHLITLIEELREKGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  173
            W+LDRLGR+M +LITL++EL E+GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  174  IVERTLAGLEaaraqgriggrrPKLTKEQHEQIARLIKNGYSRKQLAIIYDIGISTIYRY  233
            I+ER+ AG  AARA+GR GGR  KL K +   +  L  NG + K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  234  HPVEELQTQAE  244
              ++ L+ Q +
Sbjct  181  --LNKLNNQEN  189

274) ACMV_P4_00310 in NC_015188


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (463),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 76/183 (42%), Positives = 126/183 (69%), Gaps = 4/183 (2%)

Query  10   IGYARVSTQGQDLAQQRATLREAGCTRIFEEKVSGAKRDRPELARLLDHLRAGDVVTVTR  69
            IGYARVST  Q+L  Q   L   GC +IF++ +SG+K  RP L + ++  R+GD + V R
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  70   LDRLARSTRDLLDIAERIKEAGAGLRSLAEPWA-DTTTPAGRMVLTVFAGMADFERSLIV  128
            LDRL+R+  DL+ + + ++E G +++SL E  + D ++++G++++ +FA+ A+FER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  129  ERTSTGRIAAKARGVRFGPRPA-LAAEQIAHARQLIEVDGKPVAEVARLLGVHRATLYRT  187
            ER+S+GRIAA+ARG R+G RP  L   +++  + L + +G P+  +A    V R+T+YR 
Sbjct  123  ERSSAGRIAARARG-RYGGRPEKLNKRDLTLLKTLYD-NGTPIKTIAEQWKVSRTTIYRY  180

Query  188  LEK  190
            L+K
Sbjct  181  LNK  183

275) XC_2601 in NC_007086


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (463),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 127/186 (69%), Gaps = 2/186 (1%)

Query  4    IGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRAGDVLAVWR  63
            IGYARVST+ Q+  LQ D L   GCE++F+D  SG+K+ RPGL  A+ + R+GD + VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMQHLIETIAALEARGVGFRSLTESI--DTTTPGGRLIFHVFGALGQFERDLIR  121
            LDRLGR+M++LI  +  L+ RGV+F+SL E+I  D +++ G+L+FH+F+A+++FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ErtkagltaaaargrkggrkPVVTADKLQRAREHIANGLNVREAAKRLKVSKTALYAALQ  181
            ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  STSAAN  187
              +  +
Sbjct  183  KLNNQE  188

276) XCC1630 in NC_003902


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (463),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 127/186 (69%), Gaps = 2/186 (1%)

Query  4    IGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRAGDVLAVWR  63
            IGYARVST+ Q+  LQ D L   GCE++F+D  SG+K+ RPGL  A+ + R+GD + VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSMQHLIETIAALEARGVGFRSLTESI--DTTTPGGRLIFHVFGALGQFERDLIR  121
            LDRLGR+M++LI  +  L+ RGV+F+SL E+I  D +++ G+L+FH+F+A+++FER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ErtkagltaaaargrkggrkPVVTADKLQRAREHIANGLNVREAAKRLKVSKTALYAALQ  181
            ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  STSAAN  187
              +  +
Sbjct  183  KLNNQE  188

277) pin in NC_013941


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (462),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 93/180 (52%), Positives = 129/180 (72%), Gaps = 2/180 (1%)

Query  1    MQIGYIRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSARPGLKKLLRTLSEGDTLVV  60
            M+IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +     GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLITLIEELREKGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LITL++EL E+GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTLaglaaaraqgriggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYDIGISTIYRY  178
            I+ER+ AG  AARA+GR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

278) SBO_1391 in NC_007613


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  126 bits (462),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 93/180 (52%), Positives = 130/180 (73%), Gaps = 2/180 (1%)

Query  1    MLIGYVRVSTNDQNTDLQQNALVCAGCEQIFEDKLSGTKTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ++ L   GCE+IF+D +SG+K+ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtlaglaaarargrtggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYGIGTSTIYRY  178
            I+ER+ AG  AARARGR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

279) RSPPHO_01146 in NC_017059


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 94/184 (52%), Positives = 134/184 (73%), Gaps = 3/184 (1%)

Query  1    MLVGYARVSTQEqdlalqldalkaaGCEKIFTEKASGAQRDRPQLLAALDYTRTGDTLVV  60
            M +GYARVST  Q+L LQ D L++ GCEKIF +  SG++  RP L  A++++R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLARSLKQLIETVEDLGGRGIGFRSLTEAI--DTQTTGGRLVFHLFAALAEFERGV  118
            W+LDRL+R++ +LI  V++L  RG++F+SL E I  D  ++ G+L+FHLFAA+AEFER +
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IrertragleaarargrvggrPPALTAKDLTVAKALLRDPEISVEDVARRLGVAPSTLYR  178
            I ER+ AG  AARARGR GGRP  L  +DLT+ K+L  D   ++  +A +  V+ +T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  179  YLPK  182
            YL K
Sbjct  180  YLNK  183

280) PT7_0578 in NC_015458


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 86/179 (49%), Positives = 133/179 (75%), Gaps = 3/179 (1%)

Query  4    RIGYARVSTDDQHLDLQRDALQQAGCGVIYEEAASGKNTARPELEQCRKALRAGDTLVVW  63
            +IGYARVST+ Q+L+LQ D L+  GC  I+++  SG ++ RP L++     R+GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   RLDRLGRSLPDLVQIVTDLEQHSIGFESLTEKI--ETGSAAGKLIFYVFAALAEFERGLI  121
            RLDRLGR++ DL+ +V +L++++++F+SL E+I  + +S++G+L+F +FAA+AEFER LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  RERTQaglaaarargrsggrKPKLDEQQIREIKALLRDPDIQVADVARRYGVSRTTIYK  180
             ER+ AG  AARARGR GGR  KL+ +++  +K+L  D +  +  +A +  VSRTTIY+
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

281) RHA1_ro03159 in NC_008268


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 87/180 (49%), Positives = 126/180 (70%), Gaps = 2/180 (1%)

Query  1    MGYARVSTAEQTADSQRDALSAAGCSRVWTDTASGATTSRPQLNDMLSHLREGDTLVVWR  60
            +GYARVST+ Q  + Q D L++ GC ++  D  SG+ + RP L+  +   R GDT+VVWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  61   LDRLGRSLPHLLQTVEDLDERGIGFRSLTESI--DTTTSGGKLIFSIFGALAEFERNLIR  118
            LDRLGR++ +L+  V++L+ERG++F+SL E+I  D ++S G+L+F +F+A+AEFERNLI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  119  ERTEVglaaarargriggrPPKMTANKIRQAHKMRENGMPLVDIAEILGVGRTTLYRHLK  178
            ER+  G  AARARGR GGRP K+    +     + +NG P+  IAE   V+RTT+YR L+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

282) BP1026B_I1645 in NC_017831


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 79/170 (47%), Positives = 117/170 (69%), Gaps = 12/170 (7%)

Query  1    MRIGYARVSTEEQCLALQEDALTRAGCDLIFSDHGISGTNFCRPGLDQALQHLGRGDTLV  60
            M+IGYARVST  Q L LQED L   GC+ IF+DH +SG++  RPGLD+A++    GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRSLTKLVDMIDLLGQRDIHFESLTESI--NTQSPSGTLIFHIIAALAQFERA  118
            VWRLDRLGR++  L+ +++ L +R++ F+SL E+I  +  S++G L+FH++AA+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTRAGLAAAKNRGVRVGRPRSLTE---------YQASQAIRLLSER  159
            LI ER+ AG  AA+ RG   GRP  L           Y+ + +I+ ++E+
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQ  169

283) W5S_2866 in NC_017845


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 81/182 (45%), Positives = 123/182 (68%), Gaps = 2/182 (1%)

Query  1    MLIGYARVSTTDQNTDLQKKALIRAECELIFEDTASGKNAQRAGLKRAMRRLRRGDTLIV  60
            M IGYARVST  QN +LQ   L    CE IF+D  SG +++R+GL +A+   R GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVRDLIELVSALQAKGIHFRSLTDSI--DTSTPAGRFFFHVMSALAEMEREL  118
            W+LDRLGR++ DLI LV+ L+ +G+ F+SL ++I  D S+++G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLDAARLQGRIGGRKRLMTQDALCRAEAMLATGATRFQVANVVGVSEKTIYKY  178
            I+ER+ AG  AAR +GR GGR   + +  L    ++   G+    +A+   VS  TIY+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  FP  180
            + 
Sbjct  181  LN  182

284) RD1_C0010 in NC_008388


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 81/182 (45%), Positives = 125/182 (69%), Gaps = 7/182 (3%)

Query  1    MIIGYARVSTDDQNLDSQTDALSAAGVEKVFADKISGSRRARPELDRMLEQLRDGDVVAV  60
            M IGYARVST+ QNL+ Q D L++ G EK+F D +SGS+  RP LD+ +E  R GD + V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TKYDRLARSLKDLLEIVEAIGERGAGFRSLAEDI--DTTTPAGRLVFHVFASIAQFERER  118
             + DRL+R++ DL+ +V+ + ERG +F+SL E+I  D ++++G+L+FH+FA++A+FER+ 
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ISERTREGLTSARKRGRVGGRPPALSAAQKKEVRRMRD--EEQRAIAEIARLFKVSERTV  176
            I ER+  G  +AR RGR GGRP  L+   K+++  ++   ++  +I  IA   KVS  T+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN---KRDLTLLKTLYDNGTPIKTIAEQWKVSRTTI  177

Query  177  RR  178
             R
Sbjct  178  YR  179

285) tnpR in NC_007103


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 133/185 (72%), Gaps = 6/185 (3%)

Query  1    MIFGYARVSTEEQNLDMQIDALQQYGVERLYQEKMTGIKKERPQLEELLKVLRKGDKIVV  60
            M +GYARVST  QNL++Q D L+  G E+++++ M+G K  RP L+  +   R GD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRISRSTKHLIELSEKFKELGVDFISIHDNI--DTSNAMGKFFFRMMASIAELERDI  118
             +LDR++R+  +LI L + ++E GV F S+++NI  D S++ G+++F++ A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ISERTKTGLNAARARGKKGGRPQKHTDKVEMAL--KMYQSKEYSIKQITEATGLSKTTLY  176
            I ER+ +G  AARARG+ GGRP+K  +K +++L   +Y++   +IK I+E   +S+TT+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEK-LNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  177  RYINK  181
            RY+NK
Sbjct  179  RYLNK  183

286) resR1 in NC_018000


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 80/183 (44%), Positives = 117/183 (64%), Gaps = 3/183 (1%)

Query  5    LGYARVSTGDQDVASQTMRLEQAGAIKVFTDVKSGKSMDRPGLAELLAYARMGDTLAVVR  64
            +GYARVSTG Q++  Q  RL+  G  K+F D  SG    RPGL   + +AR GDT+ V R
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSLAELLETVKMLRERKIDLLSLEEKI--DTSSAAGELVFHVFGAIAHFERRLIS  122
            LDRLGR++ +L+  V+ L ER + + SLEE+I  D SS++G+L+FH+F+A+A+FER LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTKDGIAAARVQGKRPGR-QPLDMKKVEAAMKLVSTGMPPVEAAKQLGLGRSTVYREMR  181
            ER+  G  AAR +G+  GR + L+ + +     L   G P    A Q  ++R+T+YR + 
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  RLG  184
            +L 
Sbjct  183  KLN  185

287) YBT020_29391 in NC_017199


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 77/182 (43%), Positives = 128/182 (71%), Gaps = 2/182 (1%)

Query  1    MKFGYMRVSTIDQNLDRQEQQLKEAGCERMFFEKVTGTKRDRLELNRMLEFLRNGDTVVV  60
            MK+GY RVST  QNL+ QE++L+  GCE++F + ++G+K  R  L++ +EF R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TDLTRLSRSTKDLIEITELISQKGANLKSLKEA-WLDTTTAHGKMLFTVFAGIAQFERDL  119
              L RL+R+  DLI + + ++++G ++ SL E   +D +++ G++LF +FA++A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  TSERTKEGILAAKKRGKYPGRPS-VDKEKLSYAFYLMEQGASITEAAEKSGISRMTIYRN  178
              ER+  G +AA+ RG+Y GRP  ++K  L+    L ++G++I   AE+  +SR TIYR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  MN  180
            +N
Sbjct  181  LN  182

288) YBT020_28669 in NC_017201


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 77/182 (43%), Positives = 128/182 (71%), Gaps = 2/182 (1%)

Query  1    MKFGYMRVSTIDQNLDRQEQQLKEAGCERMFFEKVTGTKRDRLELNRMLEFLRNGDTVVV  60
            MK+GY RVST  QNL+ QE++L+  GCE++F + ++G+K  R  L++ +EF R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TDLTRLSRSTKDLIEITELISQKGANLKSLKEA-WLDTTTAHGKMLFTVFAGIAQFERDL  119
              L RL+R+  DLI + + ++++G ++ SL E   +D +++ G++LF +FA++A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  TSERTKEGILAAKKRGKYPGRPS-VDKEKLSYAFYLMEQGASITEAAEKSGISRMTIYRN  178
              ER+  G +AA+ RG+Y GRP  ++K  L+    L ++G++I   AE+  +SR TIYR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  MN  180
            +N
Sbjct  181  LN  182

289) SFHH103_03984 in NC_016813


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 76/183 (42%), Positives = 129/183 (71%), Gaps = 4/183 (2%)

Query  1    MMIGYARVSTQGQDLDQQRAALSAAGCIRLFEEKVSGAKRDRPELARMLDHLRNGDVVTI  60
            M IGYARVST  Q+L+ Q   L++ GC ++F++ +SG+K  RP L + ++  R+GD + +
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   PRLDRLARSTADLLTIAERIKEAGAGLRSLAEPWA-DTTTPAGRMVLTVFAGMAEFERSL  119
             RLDRL+R+  DL+T+ + ++E G +++SL E  + D ++++G++++ +FA+ AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  IVERTSAGRIAAKARGVRFGPSPA-LSAEQIAHARHLINEEKKPVVEVARLLKVHRATLY  178
            I+ER+SAGRIAA+ARG R+G  P  L+  +++  + L ++   P+  +A   KV R+T+Y
Sbjct  121  ILERSSAGRIAARARG-RYGGRPEKLNKRDLTLLKTLYDNG-TPIKTIAEQWKVSRTTIY  178

Query  179  RAL  181
            R L
Sbjct  179  RYL  181

290) Psest_4043 in NC_019936


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (457),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 97/181 (54%), Positives = 136/181 (76%), Gaps = 4/181 (2%)

Query  1    MKIGYARVSRddqqldlqhdaltaaGCERIFSDKMSGAKASRPGLDEALAFARPGDVLVV  60
            MKIGYARVS + Q+L+LQ+D L + GCE+IF+D MSG+K+ RPGLD A+ FAR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSMSELLRLTANLEASGVGLESLKEQI--DTTSAAGRLVFHVFAAMAEFERNL  118
            WRLDRLGR+M +L+ L  +L+  GV+++SL E+I  D +S++G+L+FH+FAA AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTFagleaarargrqggrPG-VPPETIAAIQALAGDQNRTPDEICKALKISRSTLYK  177
            I ER+ AG  AARARGR GGRP  +    ++ +++L  D+      I    K+SR+T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  178  Y  178
            Y
Sbjct  180  Y  180

291) ETEC_2009 in NC_017633


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 93/180 (52%), Positives = 129/180 (72%), Gaps = 2/180 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+K+ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtlaglaaarargrtggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYGIGISTIYRY  178
            I+ER+ AG  AARARGR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

292) ECO103_1894 in NC_013353


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (457),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 93/180 (52%), Positives = 129/180 (72%), Gaps = 2/180 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+K+ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtlaglaaarargrtggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYDIGISTIYRY  178
            I+ER+ AG  AARARGR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

293) SSON53_08190 in NC_016822


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 93/180 (52%), Positives = 129/180 (72%), Gaps = 2/180 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+K+ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtlaglaaarargrtggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYGIGISTIYRY  178
            I+ER+ AG  AARARGR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

294) pin in NC_017646


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 128/180 (72%), Gaps = 2/180 (1%)

Query  31   MLIGYIRVSTNDQNTDLQRNALMCAGCEQIFEDKMSGTKSERPGLKRALKCLKRGDTLVV  90
            M IGY RVST  QN +LQ + L   GCE+IF+D MSG+KS RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  91   WKLDRLGRRMKHLIALTEELRAKGVNFRSLTDSI--DTSTPMGRFFFHMMGALAEMEREL  148
            W+LDRLGR M +LI+L +EL  +GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  149  IVERTLaglaaaraqgrvggrrPKLTKEQHEQIARLLQKGYDRKRLAIIYDIGLSTIYRY  208
            I+ER+ AG  AARA+GR GGR  KL K +   +  L ++G   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

295) PST_0242 in NC_009434


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 96/181 (54%), Positives = 136/181 (76%), Gaps = 4/181 (2%)

Query  1    MKIGYARVSRddqqldlqhdalsaaGCERIFSDKMSGAKASRPGLDEALAFARPGDVLVV  60
            MKIGYARVS + Q+L+LQ+D L++ GCE+IF+D MSG+K+ RPGLD A+ FAR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSMSELLRLTASLESTGVGLESLKEQI--DTTNAAGRLVFHVFAAMAEFERNL  118
            WRLDRLGR+M +L+ L   L+  GV+++SL E+I  D ++++G+L+FH+FAA AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTFagleaarargrqggrPG-VPPETIAAIQALAGDQNRTPDEICKALKISRSTLYK  177
            I ER+ AG  AARARGR GGRP  +    ++ +++L  D+      I    K+SR+T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  178  Y  178
            Y
Sbjct  180  Y  180

296) inv in NC_013716


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 93/180 (52%), Positives = 129/180 (72%), Gaps = 2/180 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+K+ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtlaglaaarargrtggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYGIGTSTIYRY  178
            I+ER+ AG  AARARGR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

297) inv in NC_013716


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 93/180 (52%), Positives = 129/180 (72%), Gaps = 2/180 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+K+ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtlaglaaarargrtggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYGIGTSTIYRY  178
            I+ER+ AG  AARARGR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

298) ECOK1_2592 in NC_017628


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 93/180 (52%), Positives = 129/180 (72%), Gaps = 2/180 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+K+ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtlaglaaarargrtggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYGIGTSTIYRY  178
            I+ER+ AG  AARARGR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

299) pin in NC_007946


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 93/180 (52%), Positives = 129/180 (72%), Gaps = 2/180 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPGLKRALKRLQKGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D +SG+K+ RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtlaglaaarargrtggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYGIGTSTIYRY  178
            I+ER+ AG  AARARGR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

300) ECABU_c18600 in NC_017631


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 128/180 (72%), Gaps = 2/180 (1%)

Query  1    MLIGYIRVSTNDQNTDLQRNALMCAGCEQIFEDKMSGTKSERPGLKRALKCLKRGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D MSG+KS RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRRMKHLIALTEELRAKGVNFRSLTDSI--DTSTPMGRFFFHMMGALAEMEREL  118
            W+LDRLGR M +LI+L +EL  +GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTLaglaaaraqgrvggrrPKLTKEQHEQIARLLQKGYDRKRLAIIYDIGLSTIYRY  178
            I+ER+ AG  AARA+GR GGR  KL K +   +  L ++G   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

301) pin in NC_011750


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 128/180 (72%), Gaps = 2/180 (1%)

Query  1    MLIGYIRVSTNDQNTDLQRNALMCAGCEQIFEDKMSGTKSERPGLKRALKCLKRGDTLVV  60
            M IGY RVST  QN +LQ + L   GCE+IF+D MSG+KS RPGL +A+   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRRMKHLIALTEELRAKGVNFRSLTDSI--DTSTPMGRFFFHMMGALAEMEREL  118
            W+LDRLGR M +LI+L +EL  +GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTLaglaaaraqgrvggrrPKLTKEQHEQIARLLQKGYDRKRLAIIYDIGLSTIYRY  178
            I+ER+ AG  AARA+GR GGR  KL K +   +  L ++G   K +A    ++ +TIYRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

302) PFLU5282A in NC_012660


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 90/183 (50%), Positives = 132/183 (73%), Gaps = 3/183 (1%)

Query  4    RIGYARVSTDDQNLDLQRDALALAGCSVVYEETMSGKSADRPELGHCLKALRSADTLVVW  63
            +IGYARVST+ QNL+LQ D L   GC  ++++ MSG  + RP L+  +   RS+DT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   RLDRLGRSLPDLVGIVSRLEQEGVAFESITERI--ETTSAAGKLIFHVFAALAEFERNLI  121
            RLDRLGR++ DL+ +V+ L++ GV+F+S+ E I  + +S++G+L+FH+FAA+AEFERNLI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  rertraglaaarargrkggrKPALDDRQVREIRALLRDPEIRVTDVARRYGVSRTTLYRY  181
             ER+ AG  AARARGR GGR   L+ R++  +++L  D    +  +A +  VSRTT+YRY
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYRY  180

Query  182  VGS  184
            +  
Sbjct  181  LNK  183

303) Celgi_0271 in NC_015671


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 84/182 (47%), Positives = 130/182 (72%), Gaps = 3/182 (1%)

Query  3    TIGYARVSTREQNPDGQTDALEAAGCDKIFVEHASGTLAKRPALSDALGYLREGDSLVVT  62
             IGYARVST  QN + Q D L++ GC+KIF +H SG+ +KRP+L  A+ + R GD++VV 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KLDRLGRSVRNLKQIADELQRRGVGLRALSQGI--DTTTPGGRLFFHMLAAIAEFEHDLI  120
            +LDRLGR++ +L  + +EL+ RGV++++L + I  D +++ G+L+FH++AA+AEFE++LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  VERTHDglaaarargrkggPKFKMTPTKIRQARAMYDEGAHTVQEIADTFGVSRPTIYRH  180
            +ER+  G  AARARGR GG   K+    +   +++YD+G+  ++ IA+   VSR TIYR 
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRY  180

Query  181  LA  182
            L 
Sbjct  181  LN  182

304) HYPDE_34678 in NC_021172


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (455),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 124/185 (68%), Gaps = 4/185 (2%)

Query  4    MLIGYARVSTEDQNLAMQLDALRAAGCEQIFRDEGVSGSETDRAELNKalaalaaGDVLV  63
            M IGYARVST  QNL +Q D L + GCE+IF D+ +SGS + R+ L+KA+    +GD +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  64   VWKLDRLGRSLAHLMQIVTRLGAEAVGFRSLSEAI--DTTTASGRLLFHVVGAIAEFERN  121
            VW+LDRLGR++ +L+ +V  L   +V+F+SL E I  D ++++G+LLFH+ +A+AEFERN
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  122  LISERTSAGMAAAKARGQHLGRERKLTEADVRWAYHAITSGMMTPRAAAASLGVSISTLY  181
            LI ER+SAG  AA+ARG+  GR  KL   D+     ++       ++ A    VS +T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLT-LLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  182  RSLRR  186
            R L +
Sbjct  179  RYLNK  183

305) hin in NC_006905


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 82/179 (46%), Positives = 131/179 (74%), Gaps = 2/179 (1%)

Query  4    IGHIRVSTIDQNIDLQRNALTCANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWK  63
            IG  RVST  QN++LQ + L    C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGSSVKNLVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLG ++ +L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTlaglaaaraqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  180
            ER+ AG  AARA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

306) Mycsm_01247 in NC_019966


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (455),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/183 (43%), Positives = 127/183 (70%), Gaps = 5/183 (2%)

Query  12   RIGYTRVSTVSQTLDQQNAALTAASVTKTFSDTMSGARDDRPGLAALMAYVRTSDTVVVW  71
            +IGY+RVST  Q L+ Q+  L + +  K F+D MSG++  RPGL   + + R++DT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  72   KLDRLGRNLWHILQTVKELTERGVTLVSVTDGI--DSSTAAGRMMIGVLGSLAEYERELT  129
            +LDRLGRN+ +++  V+EL ERGV++ S+ + I  D S+++G++++ +++++AE+ER+L 
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  130  KERTALKRAASRASGTRF-GRPRKVNDADHIATARKMKADGHNGKDIAKYLGVSRATLYR  188
             ER++  R A+RA G R+ GRP K+N  D ++  + +  +G   K IA    VSR+T+YR
Sbjct  122  LERSSAGRIAARARG-RYGGRPEKLNKRD-LTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  189  YLA  191
            YL 
Sbjct  180  YLN  182

307) tnpR in NC_017724


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (452),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 96/183 (53%), Positives = 141/183 (78%), Gaps = 3/183 (1%)

Query  1    MLIGYARVSTDDQNLDLQRDALQATGCGKIFEDQISGAKAERPGIQAALHFARPGDTLVI  60
            M IGYARVST+ QNL+LQ D L++ GC KIF+D++SG+K+ RPG++ A++FAR+GDT+V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WrldrlsrslkdlIEMVKHLESKGIGLKSLQESI--DTTSSSGMLIFHLFGALAEFERNL  118
            WRLDRL+R++ DLI +V++L+ +G+++ SL+E+I  D +SS+G L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TRERTQaglqaarargrkggrPKTLSKDKQALAVQLYNEKKHTVAQICVLMGISRPTLYK  178
              ER+ AG  AARARGR GGRP  L+K   +L   LY++    +  I     +SR T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YIE  181
            Y++
Sbjct  180  YLN  182

308) SJA_C1-06110 in NC_014006


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (453),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 78/181 (44%), Positives = 119/181 (66%), Gaps = 5/181 (2%)

Query  1    MIVGYARVSTTDQCLAVQMDELAAHGCDRIFQDQASGTSRARAGLVEMMQFVREGDTIVV  60
            M +GYARVST  Q L +Q D L +HGC++IF+D+ SG+   R+GL   ++F R GDTIVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   SRLDRFARSLTDLFQLLDELSRKGVAFQCVHQSI--DTSSSTGKLTLAILGAVAEFENDI  118
             RLDR++R++ DL+ L++EL+ +GV+F+ ++++I  D SSSTG+L + +++A AEFE ++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  RRERQRAGIAKAKANGVYKGRRAKINAER---VREMAAQGFTASTIASELGCHRQSAYRL  175
              ER  AG   A+A G Y GR  K+N      ++ +  +G    TIA +    R + YR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  176  L  176
            L
Sbjct  181  L  181

309) SARI_00048 in NC_010067


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (452),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 98/183 (54%), Positives = 136/183 (75%), Gaps = 3/183 (1%)

Query  1    MLVGYARVSTDDQNLNLQRDALKLAGCTKIFEDQISGAKAERPGLHAVLQFIRPGDTLVV  60
            M +GYARVST+ QNLNLQ D L+  GC KIF+D++SG+K+ RPGL+  ++F R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WrldrlsrslkdlIEMVRQLESNSIGLKSLQESI--DTTSSSGMLIFHLFGALAEFERNL  118
            WRLDRL+R++ DLI +V +L+  ++++ SL+E+I  D +SS+G L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  TRERTQVGLQaarargrkggrPKVLNKDKQALAVQLYDERKHTVAQICELMGVSRPTLYK  178
              ER+  G  AARARGR GGRP  LNK   +L   LYD+    +  I E   VSR T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYR  179

Query  179  YID  181
            Y++
Sbjct  180  YLN  182

310) ECSE_1871 in NC_011415


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (452),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 92/178 (52%), Positives = 128/178 (72%), Gaps = 2/178 (1%)

Query  9    IGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPGLKRALKRLQKGDTLVVWK  68
            IGY RVST  QN +LQ + L   GCE+IF+D +SG+K+ RPGL +A+   + GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  69   LDRLGRSMKHLISLVGELRERGINFRSLTDSI--DTSSPMGRFFFHVMGALAEMERELIV  126
            LDRLGR+M +LI+LV EL ERG++F+SL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  127  ErtlaglaaarargrtggrrPKLTKEQHEQIARLIKNGHDRKQLAIIYGIGTSTIYRY  184
            ER+ AG  AARARGR GGR  KL K +   +  L  NG   K +A    ++ +TIYRY
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

311) MmarC7_1490 in NC_009637


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  124 bits (452),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 87/185 (48%), Positives = 126/185 (69%), Gaps = 5/185 (2%)

Query  1    MIIGYARVSTKDQKLERQIDELKKAGCEKIFLEKISGTKKNRPEFDRMFEVLRPGDMVIV  60
            M IGYARVST  Q+L+ Q D L+  GCEKIF + +SG+K +RP +D+ +E  R+GD ++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   SELTRLSRSTKDLIEIMTRLEEMGVSVKCLKES-WLDTSSAHGKLLFTIFAGLAEFERDL  119
              L RL+R+  DLI ++  L+E GVS   L E+  +D SS+ G+LLF +FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  ISERVKSGLKAARSRGRQGGRPKADINQVELAL--KMYDSKEYEVKQILKATGISKYTLY  177
            I ER  +G  AAR+RGR GGRP   +N+ +L+L   +YD+    +K I     +S+ T+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRP-EKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  178  NYLKK  182
             YL+K
Sbjct  179  RYLNK  183

312) P12B_c2722 in NC_017663


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 91/179 (51%), Positives = 131/179 (74%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCEQIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTTEQWAQIGRLLEAGESIQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G +I+ IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

313) Sta7437_4816 in NC_019749


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 83/180 (47%), Positives = 124/180 (69%), Gaps = 3/180 (1%)

Query  1    MKIGYARVSTNDQNLDSQISLLIENGCEKIFEEKISGAKKSRPELKKLLNQLRKDDTLVV  60
            MKIGYARVST  QNL+ Q   L  +GCEKIF++ +SG+K  RP L K ++  R +DT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   CKLDRLARSTHHLLEIVETLREKKAAFCSLGEPWA-DTTSHAGKMIMTVFAGIAEFERDL  119
             +LDRL+R+ ++L+ +V+ L E+  +F SL E  + D +S +G+++  +FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  IRERTSVGREAAMKRGIRF-GRPRKLSPEQKELILKLREEGKSATELAKTFNVDRSTIYR  178
            I ER+S GR AA  RG R+ GRP KL+  +  L+  L ++G +   +A   +V R+TIYR
Sbjct  121  ILERSSAGRIAARARG-RYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

314) DMR_37200 in NC_012796


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/184 (45%), Positives = 125/184 (68%), Gaps = 3/184 (1%)

Query  1    MIIGYARVSTDKQDLSSQIIRLKQAGAERVYQDVMSGKRFDRPGLAEMMAFAREGDALCV  60
            M IGYARVST+ Q+L+ Q  RL+  G E++++D MSG +  RPGL   + FAR GD++ V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   VRLDRLGRSMRELLEIMDRLKSLKVGFKSLEEQ--LDTTSAAGSLIFHVFAALADFERSL  118
             RLDRLGR+M +L+ +++ L+   V+F SLEE+  +D +S++G L+FH+FAA+A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  LAERTRDGLAVARAKGNMPGRP-KVDDAKVELAQRLLAEGHSKaaaaraaGISRATFLRR  177
            + ER+  G   ARA+G   GRP K++   + L + L  +G +  + A    +SR+T+ R 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  178  LAQL  181
            L +L
Sbjct  181  LNKL  184

315) BCQ_PT41 in NC_011971


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 78/182 (43%), Positives = 119/182 (66%), Gaps = 2/182 (1%)

Query  1    MIFGYARVSTKKQNLDMQLDELNRYGCEEIVTEKESGAKKDRKELQLLLGKLRKGDTLVV  60
            M +GYARVST  QNL++Q D LN  GCE I  +  SG+K  R  L+  +   R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRLGRTMHQLVNLLQEFNDKEIHFVSIKDGI--DTSTTMGRFLFHIFGAMAEMEREV  118
             +LDRLGR M++L+ L++E+N++ + F S+ + I  D S++ G++LFH+F+A AE ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  INERVVSGVAAAKERGKQGGRKRAHTPEQIEGMLKMVEQGLPKVDICKMFNVSRATLYRY  178
            I ER  +G  AA+ RG+ GGR       ++  +  + ++G P   I    +VSR+T+YRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  IN  180
            +N
Sbjct  181  LN  182

316) Swit_5399 in NC_009507


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 74/182 (41%), Positives = 123/182 (68%), Gaps = 1/182 (0%)

Query  1    MKLGYARVSTEDQNLEIQRGRLSEAGCEMMFEEKISGAARGRPELEKLMGHLRKDDVLVV  60
            MK+GYARVST  QNL++Q +RL+  GCE +F++ +SG+   RP L+K +   R +D +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   ARLDRLARSTIELLHIAERIKEKQAGLQSLDEPWA-DTTSPSGVMIMTVFAGIAQFERTL  119
             RLDRL+R+  +L+ + + ++E+  +++SL+E  + D +S++G ++  +FA++A+FER L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  ILSRTEEGRKAAMARGVSFGRPKKMRPDQAELARQLVLEGKSISAVARTFNVHPATIYRC  179
            IL R+  GR AA ARG   GRP K+   +  L + L  +G +I ++A   +V  +TIYR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  180  IE  181
            ++
Sbjct  181  LN  182

317) A225_2413 in NC_018106


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  123 bits (451),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 88/181 (49%), Positives = 131/181 (73%), Gaps = 2/181 (1%)

Query  1    MLIGYARVSTGDQNLDLQKNALIRAECELIFEDTASGKNAKrpglrrairrlrpgDSLVV  60
            M IGYARVSTG QNL+LQ + L    CE IF+D  SG ++KRPGL +AI   R+GD++VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVRDLITLVSELQEKGIHFRSLTDSI--DTSTPAGRFFFHVMSALAEMEREL  118
            W+LDRLGR++ DLITLV+EL+E+G+ F+SL ++I  D S+++G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLAAAREQGRIGGRRRVMTPDVVERGHRMLENGATRQQVADVIGVGVKTIYKY  178
            I+ER+ AG  AAR +GR GGR   +    +     + +NG+  + +A+   V+  TIY+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  F  179
            +
Sbjct  181  L  181

318) Emtol_0068 in NC_018743


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  123 bits (451),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 87/195 (45%), Positives = 137/195 (71%), Gaps = 6/195 (3%)

Query  1    MILGYARVSTKDQNLDLQIEALKKAGCEKIFQEKISGSTKERPELNKMLQHLREGDIIVV  60
            M +GYARVST  QNL+LQ + L+  GCEKIF++ +SGS   RP L+K ++  R GD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSIKNIIDLVLELNQKKVIIKGLTDGV--DTSTSNGRLFLNVMASLAEYEREL  118
            W+LDRLGR++ ++I LV ELN++ V + +L + +  D S+S G+L++++ A++AE+ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTNaglssarargrvggrPKGLKAETVAKLKILRTLYKDTNKQPREIYQPLEITHAS  178
            I ER++AG  +ARARGR GGRP  L+      L +L+TLY D     + I +   +++++
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRD---LTLLKTLY-DNGTPIKTIAEQWKVSRTT  176

Query  179  YYRYIKLLDKYSDKE  193
             YRY++ L++  +K+
Sbjct  177  IYRYLNKLNNQENKD  191

319) E2348C_0835 in NC_011601


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTMaglaaarakgrvggrrPKLTTEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

320) EcolC_2757 in NC_010468


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 93/191 (49%), Positives = 138/191 (73%), Gaps = 5/191 (2%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTTKQWAQIGRLLEAGESRQRIALIFDVGVSTIYR-  177
            I+ER+ AG  AARA+GR GGR  KL  ++ + +  L + G + + IA    V+ +TIYR 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  178  --KFPANENNE  186
              K+  +EN++
Sbjct  181  LNKLNNQENKD  191

321) Dd1591_1818 in NC_012912


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 88/181 (49%), Positives = 130/181 (72%), Gaps = 2/181 (1%)

Query  1    MLIGYARVSTSDQNTELQKNALVSANCELIFEDQASGKNARRPGLKRALRKLKRGDTLIV  60
            M IGYARVST+ QN +LQ + L +  CE IF+D+ SG +++RPGL +A+   + GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVRDLITMVSDLQGRGIHFRSLTDAI--DTSTPAGRFFFHVMSALAEMEREL  118
            W+LDRLGR++ DLIT+V++L+ RG+ F+SL + I  D S+++G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTraglaaaraagriggrrriMTPDAVDQAKTLLNNGATRWQIANIIGVSEKTIYKY  178
            I+ER+ AG  AARA GR GGR   +    +   KTL +NG+    IA+   VS  TIY+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  L  179
            L
Sbjct  181  L  181

322) Veis_5037 in NC_008771


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 85/180 (48%), Positives = 133/180 (74%), Gaps = 3/180 (1%)

Query  11   LRLGYARVSTddqdmalqldalaKVQCDRVFSEKVSSGKASRPQLEECLRTLRRGDVLTV  70
            +++GYARVST+ Q++ LQ D L    C+++F++ +S++K+ RP L+  +   R GD + V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  71   WRLDRLGRSMAELVAIVNDLASRGVTFESLTEHI--DTSSASGKFTFHLFSALAEFERNT  128
            WRLDRLGR+M +L+++VN+L  RGV+F+SL E+I  D SS++G++ FHLF+A+AEFERN 
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  129  IRERTKaglvaarargrmggrPTKVTPKAKREMKALYTSQDVSVKDICTRYSITRSTFYR  188
            I ER+ AG +AARARGR GGRP K+  +    +K+LY  ++ ++K I  +  ++R+T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

323) SN31241_38600 in NC_021902


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 77/169 (46%), Positives = 127/169 (76%), Gaps = 2/169 (1%)

Query  6    QNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWKLDRLGRSVKN  65
            QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+LDRLGR++ +
Sbjct  13   QNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMED  72

Query  66   LVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIVERTlaglaaa  123
            L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+ER+ AG  AA
Sbjct  73   LITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAA  132

Query  124  raqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  172
            RA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  133  RARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

324) hin in NC_017046


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 77/169 (46%), Positives = 127/169 (76%), Gaps = 2/169 (1%)

Query  6    QNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWKLDRLGRSVKN  65
            QN++LQ + L +  C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+LDRLGR++ +
Sbjct  13   QNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMED  72

Query  66   LVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIVERTlaglaaa  123
            L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+ER+ AG  AA
Sbjct  73   LITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAA  132

Query  124  raqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  172
            RA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  133  RARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

325) ETEC_0311 in NC_017633


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (442),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVILVEELRERGVNFRSLTDAI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERGV+F+SL + I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLEaaraqgriggrrPKLTPEQWAQAGRLIASGVPRQKVAIIYDVGISTLYK  177
            I+ER+ AG  AARA+GR GGR  KL   + +    L  +G P + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

326) Emtol_0038 in NC_018744


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (442),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 86/185 (47%), Positives = 130/185 (71%), Gaps = 6/185 (3%)

Query  1    MKIGYARVSTKEQVLDLQIDALTKDGCEMIFKETASGAKTERPELQKLLSHLRKGDIVVV  60
            MKIGYARVST  Q L+LQ D L  +GCE IF++  SG+K+ RP L+K +   R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRLGRSLKHLLEVVAELNQKEVGIRSINDAI--DTTTPQGRLFFNISASFAEFEREL  118
             +LDRLGR++ +L+ +V ELN++ V+++S+++ I  D +++ G+L+F++ A+FAEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTKSGLEaarargrkggrrQGMTKGAEQKAILAETYYKEGKLGVNQIAKEIGVSKMT  178
            I ER+ +G  AARARGR GGR + + K   +   L  T Y +G   ++ IA +  VS+ T
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNK---RDLTLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  179  LYKYL  183
            +Y+YL
Sbjct  177  IYRYL  181

327) Emtol_0101 in NC_018749


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (443),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 86/185 (47%), Positives = 132/185 (72%), Gaps = 6/185 (3%)

Query  1    MKIGYARVSTKDQVLDLQIDALEKDGCELIFKETASGAKTDRPELQKLMNHLRKGDIVVV  60
            MKIGYARVST  Q L+LQ D L+ +GCE IF++  SG+K+ RP L+K ++  R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRLGRSLKHLLDVVAELNQKEVGIRSINDAI--DTTTPQGRLFFNISASFAEFERDL  118
             +LDRLGR++ +L+ +V ELN++ V+++S+++ I  D +++ G+L+F++ A+FAEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTKSGLEaarargrkggrrQGMTKDAVQKAILAETYYKEGKMGVNQIAKEIGVSKMT  178
            I ER+ +G  AARARGR GGR + + K  +    L  T Y +G   ++ IA +  VS+ T
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDL---TLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  179  LYKYL  183
            +Y+YL
Sbjct  177  IYRYL  181

328) Sput200_3754 in NC_017566


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (443),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 142/185 (77%), Gaps = 6/185 (3%)

Query  1    MIFGYCRISTKGQSFDLQEDALKNAGCERVFRDIASGAKTKRPGLDDLLGQLRAGDIIVV  60
            M +GY R+ST  Q+++LQED L+  GCE++F D  SG+K+KRPGLD  +   R+GD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRLGRSLQHLVHLMNQLTEQQIGLRSLNDQV--DTTTPQGRLITNVFASIAEFERDL  118
             +LDRLGR++++L+ L+N+L E+ ++++SL++++  D +++ G+L+ ++FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTKaglasarargrnggrpagLSKDAQNVAIAAEALYKQGSLSAQQIAAQLNISKTT  178
            I ER+ AG  +ARARGR GGRP  L+K  +++++   +LY +G+ + + IA Q ++S+TT
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNK--RDLTL-LKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  179  LYKYL  183
            +Y+YL
Sbjct  177  IYRYL  181

329) B479_27269 in NC_019906


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (443),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 124/188 (66%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQSTNLQRDALIAAGVSLAHLYEDLASGRRDDRPGLAACLKALREGD  60
            M IGY RVS   G Q+ NLQ D L + G     +++D  SG +  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLIVWKLDRLGRDLRHLINTVHDLTARSVGLKVLTGHGAAVDTTTAAGKLVFGIFAALAE  120
            T++VW+LDRLGR++ +LI  V++L  R+V++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELISERTVAGLISARARGRKGGRPFKMTAAKLRLAMASMGQPETKVGDLCEELGITR  180
            FER+LI ER+ AG I+ARARGR GGRP K+    L L + ++ +  T +  + E+  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHVS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

330) pin in NC_011745


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (442),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 131/179 (74%), Gaps = 2/179 (1%)

Query  3    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  62
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  63   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  120
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IVErtraglaaarakgrvggrrPKLTSEQWAQIGRLLEDGESRQRIALIFDVGVSTIYR  179
            I+ER+ AG  AARA+GR GGR  KL   + + +  L ++G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

331) APECO78_04920 in NC_020163


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (441),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKVSGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVILVEELRERGVNFRSLTDAI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERGV+F+SL + I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLEaaraqgriggrrPKLTPEQWAQAGRLIASGVPRQKVAIIYDVGVSTLYK  177
            I+ER+ AG  AARA+GR GGR  KL   + +    L  +G P + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

332) Glo7428_3143 in NC_019745


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (442),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 93/192 (49%), Positives = 133/192 (70%), Gaps = 3/192 (1%)

Query  1    MLIGYARVSSLDQNLDLQIDALDKAGCDHLFTDTSSGASYDRPGLQNALSHLRSGDTLVV  60
            M IGYARVS+  QNL+LQ D L+  GC+ +F D  SG+   RPGL++A+   RSGDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRNLKHLIDTVDDLNCRDIGFRSLTESI--DTTTSAGKLVFAIFGALAEFERGI  118
            WRLDRLGRN+ +LI  V++LN R+++F+SL E+I  D ++S+G+L+F +F+A+AEFER +
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTlaglaaarargrkggrrlkYSDKKIAAAMQLAAGSDDPITEVCESLGISRATYYR  178
            I ER+ AG  AARARGR GGR  K + + ++    L   +  PI  + E   +SR+T YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNG-TPIKTIAEQWKVSRTTIYR  179

Query  179  RQKSLHSSAAKD  190
              + L++   KD
Sbjct  180  YLNKLNNQENKD  191

333) SSON53_15410 in NC_016822


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (442),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 88/190 (47%), Positives = 132/190 (70%), Gaps = 2/190 (1%)

Query  1    MLIGYIRVSTNDQNTALQRNALECAGCELFFEDRISGKTRERPGLKRALKRLRPGDTLLV  60
            M IGY RVST  QN  LQ + L+  GCE +F+D++SG    RPGL +A+   R+GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMQHLVLLTEELRQRGVNFRSITDNI--DTSTPMGRFFFHIMGALAEMEREL  118
            W+LDRLGR+M++L+ L +EL +RGV+F+S+ +NI  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIErtraglaaaraqgrhggrPQKLTEKEREQIARLLANGESRKQIALIFDIGLSTLYRY  178
            I+ER+ AG  AARA+GR GGRP+KL  ++   +  L  NG + K IA    ++ +T+YRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  FPASPAPSPK  188
            +        K
Sbjct  181  LNKLNNQENK  190

334) Sputcn32_0167 in NC_009438


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (442),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 141/185 (77%), Gaps = 6/185 (3%)

Query  1    MIFGYCRISTKGQSFDLQEDALKNAGCERVFRDIASGAKTKRPGLDDLLGQLRAGDIIVV  60
            M +GY R+ST  Q+++LQED L+  GCE++F D  SG+K+KRPGLD  +   R+GD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRLGRSLQHLVHLMNQLTEQQIGLRSLNDPV--DTTTPQGRLITNVFASIAEFERDL  118
             +LDRLGR++++L+ L+N+L E+ ++++SL++ +  D +++ G+L+ ++FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTKaglasarargrnggrpagLSKDAQNVAIAAEALYKQGSLSAQQIAAQLNISKTT  178
            I ER+ AG  +ARARGR GGRP  L+K  +++++   +LY +G+ + + IA Q ++S+TT
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNK--RDLTL-LKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  179  LYKYL  183
            +Y+YL
Sbjct  177  IYRYL  181

335) Sputw3181_3209 in NC_008750


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (442),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 141/185 (77%), Gaps = 6/185 (3%)

Query  1    MIFGYCRISTKGQSFDLQEDALKNAGCERVFRDIASGAKTKRPGLDDLLGQLRAGDIIVV  60
            M +GY R+ST  Q+++LQED L+  GCE++F D  SG+K+KRPGLD  +   R+GD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRLGRSLQHLVHLMNQLTEQQIGLRSLNDPV--DTTTPQGRLITNVFASIAEFERDL  118
             +LDRLGR++++L+ L+N+L E+ ++++SL++ +  D +++ G+L+ ++FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTKaglasarargrnggrpagLSKDAQNVAIAAEALYKQGSLSAQQIAAQLNISKTT  178
            I ER+ AG  +ARARGR GGRP  L+K  +++++   +LY +G+ + + IA Q ++S+TT
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNK--RDLTL-LKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  179  LYKYL  183
            +Y+YL
Sbjct  177  IYRYL  181

336) BCAH187_C0233 in NC_011655


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (441),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 77/184 (42%), Positives = 128/184 (70%), Gaps = 4/184 (2%)

Query  1    MIFGYARVSTEEQNLDMQVDALTQFGVEKIYKEKLTGTRRDRPQLEDLLKILRSGDKIVV  60
            M +GYARVST  QNL++Q D L   G EKI+++ ++G++  RP L+  + + RSGD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRISRSTKHLIELSELFNDMGVHFVSITDSI--DTSTAMGKFFFRTMASIAELERDI  118
             +LDR++R+  +LI L + +N+ GV F S+ ++I  D S++ G+++F+  A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ISERTKSGLQAARSRGKKGGRPTKKEDK-VEMAVKMYKSKDYTIKQITVATGISKTTLYR  177
            I ER+ +G  AAR+RG+ GGRP K + + + +   +Y  ++  IK I+    +S+TT+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  178  YLDK  181
            YL+K
Sbjct  180  YLNK  183

337) BCAH820_B0202 in NC_011777


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (441),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 77/184 (42%), Positives = 128/184 (70%), Gaps = 4/184 (2%)

Query  1    MIFGYARVSTEEQNLDMQVDALTQFGVEKIYKEKLTGTRRDRPQLEDLLKILRSGDKIVV  60
            M +GYARVST  QNL++Q D L   G EKI+++ ++G++  RP L+  + + RSGD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRISRSTKHLIELSELFNDMGVHFVSITDSI--DTSTAMGKFFFRTMASIAELERDI  118
             +LDR++R+  +LI L + +N+ GV F S+ ++I  D S++ G+++F+  A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ISERTKSGLQAARSRGKKGGRPTKKEDK-VEMAVKMYKSKDYTIKQITVATGISKTTLYR  177
            I ER+ +G  AAR+RG+ GGRP K + + + +   +Y  ++  IK I+    +S+TT+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  178  YLDK  181
            YL+K
Sbjct  180  YLNK  183

338) NE0257 in NC_004757


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (442),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 75/184 (41%), Positives = 127/184 (70%), Gaps = 5/184 (2%)

Query  16   IGYARVSTEDQHLDLQIDALKLAGCSSIFEDHGLSATAKRRPGFEQALASLQAGDIFVVW  75
            IGYARVST  Q+L+LQ D L+  GC  IF+DH +S++  +RPG+++A+   ++GD +VVW
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  76   KMDRAFRSLKNALDILEEFENRAIEFRCLTEDI--DTTTPMGKCMYQIRHAFSELERNLI  133
            ++DR  R++ + + +++E+++R++ F+ L E+I  D +++ G+ ++++  AF+E+ERNLI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  134  RERTKAGMEAARQRGAHLGRPKKLSRGQIIRMQNLLQRQPDMTPVQIADQFGVSSRTIYR  193
             ER+ AG  AAR RG   GRP KL++ ++  ++ L +    +    IA+Q  VS  TIYR
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT--IAEQWKVSRTTIYR  179

Query  194  ALSK  197
             L+K
Sbjct  180  YLNK  183

339) RLO149_c018840 in NC_015730


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  121 bits (441),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 72/142 (51%), Positives = 108/142 (77%), Gaps = 3/142 (2%)

Query  12   RIGYARVSTEDQKLDLQKDALEKASCDLIFEDHGVSGAKSTRPGLDAMLEQLRAGDTVVV  71
            +IGYARVST  Q+L+LQ D L+  +C+ IF+DH +SG+KS RPGLD  +E  R+GDT+VV
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  72   FKLDRLGRSVVHLADLLVLFQGQGIHFHSLSEAI--NTASPSGKLIFHIISAVAEFQRDL  129
             +LDRLGR++ +L  L+  ++ +G+ FHSL E I  + +S++G+L+FH+++A AEF+R+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  130  IIENTCAGLRAAKRRGQHLGRP  151
            I+E + AG  AA+ RG+  GRP
Sbjct  121  ILERSSAGRIAARARGRYGGRP  142

340) KO11_19325 in NC_017660


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTTEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

341) EKO11_2998 in NC_016902


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTTEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

342) LF82_387 in NC_011993


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  3    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  62
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  63   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  120
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IVErtraglaaarakgrvggrrPKLTTEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  179
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

343) pinE in NC_017635


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTTEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

344) WFL_04605 in NC_017664


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTTEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

345) STY2889 in NC_003198


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  3    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  62
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  63   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  120
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IVErtraglaaarakgrvggrrPKLTSEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  179
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

346) STY3695 in NC_003198


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTSEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

347) t2667 in NC_004631


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTSEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

348) ECH74115_0302 in NC_011353


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 125/179 (70%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVILVEELRERGVNFRSLTDAI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERGV+F+SL + I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLEaaraqgriggrrPKLTPEQWAQAGRLIAAGIPRQKVAIIYDVGVSTLYK  177
            I+ER+ AG  AARA+GR GGR  KL   + +    L   G P + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

349) pinH in NC_002655


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 125/179 (70%), Gaps = 2/179 (1%)

Query  13   MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  72
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  73   WKLDRLGRSMRHLVILVEELRERGVNFRSLTDAI--DTSTPMGRFFFHVMGALAEMEREL  130
            W+LDRLGR+M +L+ LV+EL ERGV+F+SL + I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  131  IVERTKAGLEaaraqgriggrrPKLTPEQWAQAGRLIAAGIPRQKVAIIYDVGVSTLYK  189
            I+ER+ AG  AARA+GR GGR  KL   + +    L   G P + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

350) ECs0284 in NC_002695


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 125/179 (70%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVILVEELRERGVNFRSLTDAI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERGV+F+SL + I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLEaaraqgriggrrPKLTPEQWAQAGRLIAAGIPRQKVAIIYDVGVSTLYK  177
            I+ER+ AG  AARA+GR GGR  KL   + +    L   G P + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

351) pinH in NC_013008


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 125/179 (70%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVILVEELRERGVNFRSLTDAI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERGV+F+SL + I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLEaaraqgriggrrPKLTPEQWAQAGRLIAAGIPRQKVAIIYDVGVSTLYK  177
            I+ER+ AG  AARA+GR GGR  KL   + +    L   G P + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

352) CDCO157_0278 in NC_017906


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 125/179 (70%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVILVEELRERGVNFRSLTDAI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERGV+F+SL + I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLEaaraqgriggrrPKLTPEQWAQAGRLIAAGIPRQKVAIIYDVGVSTLYK  177
            I+ER+ AG  AARA+GR GGR  KL   + +    L   G P + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

353) SG0709 in NC_007712


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 85/179 (48%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  3    KIGYMRVSKNDQNTDLQQKSLICANCEQIFEDKISGKTDQRPGLKRALNCLKSGDTLVVW  62
            KIGY RVS   QN +LQ+  L    CE+IF+D +SG   +RPGL +A++  +SGDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KLDRLGRSIKHLITLISKLEDEGIHFHSLTDAI--DTSTSAGRFFFHVMSALAQMERELI  120
            +LDRLGR++ +LITL++ L++ G+ FHSL + I  D S+S+G+++FH+ +A+A+ ER+LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  VERTKaglaaarsrgriggrPQSLSFAQKQEAQKLLANGHSRKQLALLYGVSLASIYKY  179
            +ER+ AG  AAR+RGR GGRP+ L+  +    + L  NG + K +A    VS ++IY+Y
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

354) gin in NC_013716


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 88/190 (47%), Positives = 132/190 (70%), Gaps = 2/190 (1%)

Query  1    MLIGYIRVSTNDQNTALQRNALECAGCELFFEDRISGKTRERPGLKRALKRLRPGDTLLV  60
            M IGY RVST  QN  LQ + L+  GCE +F+D++SG    RPGL +A+   R+GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMQHLVLLTEELRQRGVNFRSITDNI--DTSTPMGRFFFHIMGALAEMEREL  118
            W+LDRLGR+M++L+ L +EL +RGV+F+S+ +NI  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIErtraglaaaraqgrhggrPQKLTGKEREQIARLLANGESRKQIALIFDIGLSTLYRY  178
            I+ER+ AG  AARA+GR GGRP+KL  ++   +  L  NG + K IA    ++ +T+YRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  FPASPAPSPK  188
            +        K
Sbjct  181  LNKLNNQENK  190

355) hin in NC_012125


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 77/169 (46%), Positives = 126/169 (75%), Gaps = 2/169 (1%)

Query  6    QNIDLQRNALTCANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWKLDRLGRSVKN  65
            QN++LQ + L    C++IF+D++SG  ++RPGL +A+ +   GDT+VVW+LDRLGR++ +
Sbjct  13   QNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMED  72

Query  66   LVALISELHERGAHFHSLTDSI--DTSSAMGRFFFHVMSALAEMERELIVERTlaglaaa  123
            L++L++EL+ERG  FHSL ++I  D SS+ G+++FH+ +A+AE ER+LI+ER+ AG  AA
Sbjct  73   LITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAA  132

Query  124  raqgrlggrpraINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF  172
            RA+GR GGRP  +NK++   +  L ++G P + +A    ++ +T+YRY+
Sbjct  133  RARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

356) plpp0052 in NC_006365


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (439),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 93/185 (51%), Positives = 133/185 (72%), Gaps = 6/185 (3%)

Query  1    MKIGYARVSTKDQLLSMQVEALNAAGCEQIHKEIASGAKTARPVLDEIIRNLREGDTLVI  60
            MKIGYARVST  Q L++Q + LN+ GCE+I ++  SG+K+ RP LD  I   R GDT+V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRNLAHLIHLTTKLIEKKVGLISLNDPI--DTTTAQGRLIFGIFASLAEFEREL  118
            W+LDRLGRN+ +LI L   L E+ V++ SL++ I  D +++ G+L+F +FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQaglksarargrkggrpkgMSQaamekaaiaeaLYKNGTIPVKKIAEQLDISKTT  178
            I ER+ AG  +ARARGR GGRP  +++      ++  +LY NGT P+K IAEQ  +S+TT
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNK---RDLTLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  179  LYLYL  183
            +Y YL
Sbjct  177  IYRYL  181

357) UMNK88_328 in NC_017641


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (439),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 88/179 (50%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCVGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVILVEELRERGINFRSLTDAI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+ LV+EL ERG++F+SL + I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTKAGLEaaraqgriggrrPKLTPEQWAQAGRLIASGVPRQKVAIIYDVGISTLYK  177
            I+ER+ AG  AARA+GR GGR  KL   + +    L  +G P + +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

358) pin in NC_007613


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (439),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKPDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+K+ RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTTEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

359) Rpic12D_5126 in NC_012849


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (439),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 84/186 (46%), Positives = 126/186 (68%), Gaps = 1/186 (0%)

Query  11   IGYARVSTESQHVDLQKDALRKAGCERVFEDIISGAKKERQGLDAALAYLREGDALVVWK  70
            IGYARVST  Q+++LQ D L   GCE++F+D +SG+K  R GLD A+ + R GD++VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  71   LDRLGRSMVHLVNTVQGLAARGVGLKVLTGQGAAIDTTTAPGKLVFGIFAALAEFERDLI  130
            LDRLGR+M +L+  V+ L  RGV++  L  +  ++D +++ G+L+F +FAA+AEFER+LI
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  131  RErtkagltaaaargrkggrkPVVTADKLQRAREHIANGLNVREAATRLKVSKTALYAAL  190
             ER+ AG  AA ARGR GGR   +    L   +    NG  ++  A + KVS+T++Y  L
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  191  QSGSEQ  196
            +  ++Q
Sbjct  182  NKLNNQ  187

360) STBHUCCB_36190 in NC_016832


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (438),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALSCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + L+  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTSEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

361) pin in NC_004631


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (438),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALSCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + L+  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTSEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

362) PP1Y_Spl144 in NC_015582


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (439),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 83/185 (45%), Positives = 127/185 (69%), Gaps = 5/185 (2%)

Query  1    MKLGYARVSTGEQNMRLQIDALRAAGAEQIFEDHGVSGSKVFKPAYAEMLKLARAGDEII  60
            MK+GYARVSTG QN+ LQ D L + G E+IF+DH +SGSK  +P+    + +AR+GD I+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLSRSLVTLITELQLLGELEVGFRSLSED--LETVTPAGRLFFHMVGAFAQFERD  118
            VWRLDRL+R++  LIT ++ L E  V+F+SL E+  ++  +++G+L+FH+ +AFA+FER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  VIRERTNAGLHAARNAGTKLGRPPVLDDARWKQVKELIEGPTAMKVSEVAKLVGVTRQAI  178
            +I ER++AG  AAR  G   GRP  L+      +K L +  T++K   +A    V+R +I
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT--IAEQWKVSRTTI  177

Query  179  YKRLD  183
            Y+ L+
Sbjct  178  YRYLN  182

363) pinE in NC_017646


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (437),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 90/179 (51%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCEQIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTTEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

364) MASS_0401 in NC_021282


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (437),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 89/186 (48%), Positives = 130/186 (70%), Gaps = 3/186 (1%)

Query  1    MLIGYARVSTVEQSTGLQLDALHAARVEQVFTDEGVSGSVSSRPELDKCLAHLRSGDTLV  60
            M IGYARVST  Q+  LQ D L++   E++F D+ +SGS S RP LDK +   RSGDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLARSLKNLLELVESLSQRGIHLRSLTEAI--DTSSASGRLVLSVFGALAEFERS  118
            VWRLDRL+R++ +L+ LV+ L++RG+ ++SL E I  D SS++G+L++ +F+A+AEFER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIIERTQaglaaarargarigrPTAMTTGQIEQAKTLVGAGHRVGDVARTLGVGRSTLYR  178
            LI+ER+ AG  AARARG   GRP  +   ++   KTL + G  +  +A    V+R+T+YR
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  179  VLGEVN  184
             L  +N
Sbjct  180  YLNKLN  185

365) D782_2458 in NC_020063


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (437),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 79/179 (45%), Positives = 119/179 (67%), Gaps = 2/179 (1%)

Query  1    MQYGYARVSTFDQNLELQLEALNRLECDHIFDDKISGAKSKRPGLDKMMKLLRPGDTVIV  60
            M+ GYARVST  QNL+LQ + LN   C+ IF+D +SG+KSKRPGLDK + + R+GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSLIHLVDLLRYFRANNIEFVSITEGIRI--STSIGRFAYTMLSAAAEMEREN  118
            W+LDRLGR++ +L+ L+  +    + F S+ E I +  S+S G++ + +++A AE ER+ 
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTRAGLAVARAKGRIGGRRPKLTPEQWAQAGRLIENGVDRKQVAIIYDVAVCTLYK  177
            I+ER+ AG   ARA+GR GGR  KL   + +    L +NG   K +A    V+  T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

366) Sinme_0413 in NC_015590


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (437),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 122/180 (68%), Gaps = 3/180 (1%)

Query  4    IGYARVSTRDHTVAAQLDELQKVECARIFEETASEANRDRPQLAAALDYMREGDTLVVWK  63
            IGYARVST  + +  Q D L+   C +IF++  S ++  RP L  A+++ R GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLARSLKQLIETVEALEDRGIGFRSLTEAI--DTTKAGGGLVVQIFGALAEFERGVIR  121
            LDRL+R++ +LI  V+ L++RG++F+SL E I  D + + G L+ ++F+A+AEFER +I 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTRAGLNAARSrgrkggrppkLKASDLEAAKALLADREINVEDVARRLGVSPATLYRYI  181
            ER+ AG  AAR+RGR GGRP KL+  DL   K+L  D    +  +A +  VS +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYRYL  181

367) BN406_00335 in NC_018700


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (437),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 122/180 (68%), Gaps = 3/180 (1%)

Query  4    IGYARVSTRDHTVAAQLDELQKVECARIFEETASEANRDRPQLAAALDYMREGDTLVVWK  63
            IGYARVST  + +  Q D L+   C +IF++  S ++  RP L  A+++ R GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLARSLKQLIETVEALEDRGIGFRSLTEAI--DTTKAGGGLVVQIFGALAEFERGVIR  121
            LDRL+R++ +LI  V+ L++RG++F+SL E I  D + + G L+ ++F+A+AEFER +I 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTRAGLNAARSrgrkggrppkLKASDLEAAKALLADREINVEDVARRLGVSPATLYRYI  181
            ER+ AG  AAR+RGR GGRP KL+  DL   K+L  D    +  +A +  VS +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYRYL  181

368) BcerKBAB4_5396 in NC_010181


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  120 bits (437),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 77/183 (43%), Positives = 124/183 (68%), Gaps = 4/183 (2%)

Query  1    MKFGYMRVSTIDQNLDRQEQQLKEAGCERIFFEKVTGVNRDRSELNRMLEFLRQGDTVVV  60
            MK+GY RVST  QNL+ QE++L+  GCE+IF + ++G +  R+ L++ +EF R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TDLTRLSRSTKDLIEIAELISRKGANLKSLKETWI--DTTTAHGKMLFTVFAGIAQFERD  118
              L RL+R+  DLI + + ++ +G ++ SL E  I  D +++ G++LF +FA++A+FER+
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LTSERTKEGILAAKKRGKCPGRPS-VDKEKLSYAFYLMEQGANITEAAEKSGISRMTIYR  177
            L  ER+  G +AA+ RG+  GRP  ++K  L+    L ++G+ I   AE+  +SR TIYR
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  178  NMN  180
             +N
Sbjct  180  YLN  182

369) pinE in NC_013941


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  119 bits (436),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 88/179 (50%), Positives = 126/179 (71%), Gaps = 2/179 (1%)

Query  13   MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV  72
            M IGY RVST  QN +LQ + LN  GCE IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  73   WKLDRLGRSMRHLVVLVEELRERGINFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  130
            W+LDRLGR+M +L+ LV+EL ERG++F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  131  IVERTKAGLEaaraqgriggrrPKLTPEQWAQAGRLIASGVPRLKVAIIYDVGISTLYK  189
            I+ER+ AG  AARA+GR GGR  KL   + +    L  +G P   +A    V+ +T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

370) STBHUCCB_28060 in NC_016832


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  119 bits (436),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  27   MLIGYVRVSTNDQNTDLQRNALSCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  86
            M IGY RVST  QN +LQ + L+  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  87   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  144
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  145  IVErtraglaaarakgrvggrrPKLTSEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  203
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

371) TY21A_13505 in NC_021176


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  119 bits (436),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 129/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTSEQWAQIGRLLEAGESRQRIALIFDVGVSIIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ + IYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

372) TY21A_17390 in NC_021176


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 88/179 (50%), Positives = 129/179 (73%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRNALSCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ + L+  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL +RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTSEQWAQIGRLLEAGESRQRIALIFDVGVSIIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ + IYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

373) MmarC7_0041 in NC_009637


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 85/184 (47%), Positives = 124/184 (68%), Gaps = 3/184 (1%)

Query  1    MIIGYARVSTKDQNLERQLDELKKAGCEKIFLEKISGTKRNRPEFDKMFGVLRSGDIILV  60
            M IGYARVST  QNL+ Q D L+  GCEKIF + +SG+K +RP +DK +   RSGD I+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TELTRISRSTKDLVEIVESCKSLGVEIKSLKES-WLDTTSAHGKLLFTIFAGLAEFERDL  119
              L R++R+  DL+ +V+  +  GV + SL E+  +D +S+ G+LLF +FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  ISERVKSGLTAARSRGRLGGRP-KIDSEKVEMALKMYDSKEYTIKQILNATGISKFTLYN  178
            I ER  +G  AAR+RGR GGRP K++   + +   +YD+    IK I +   +S+ T+Y 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YLEK  182
            YL+K
Sbjct  180  YLNK  183

374) Namu_5332 in NC_013235


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 70/162 (44%), Positives = 115/162 (71%), Gaps = 3/162 (1%)

Query  1    MRIGYGRVSTRDQRPEAQQDALDAAGCDQVFIDRASGKLASRPELDKALIAASRAGDQLL  60
            M+IGY+RVST  Q  + Q+D L++ GC+++F D+ SG  + RP LDKA I  +R+GD ++
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKA-IEFARSGDTIV  59

Query  61   VTKLDRLGRSLDHLNRLSEDLRIRDVDLVVLDQGI--DTSTAVGRMFFQILGSIAEFERA  118
            V +LDRLGR++++L  L ++L  R+V +  L++ I  D S++ G+++F++++++AEFER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTIDGLKAARARGRTGGQKKKLGPRQARMARDMYDETS  160
            LI ER+  G  AARARGR GG+  KL  R+  + + +YD+ +
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT  161

375) Strop_4137 in NC_009380


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 86/196 (44%), Positives = 132/196 (68%), Gaps = 10/196 (5%)

Query  30   MRIGYGRVSTRDQNPNAQHDALTAAGCEQIYVDKASGKLARRPELDKALLVAHRPGDQLV  89
            M+IGY+RVST  QN N Q+D L + GCE+I+ D  SG  ++RP LDKA+  A R+GD +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFA-RSGDTIV  59

Query  90   VTKLDRLGRSLENLIDLSAQLQDRNVDLVVLDQNI--DTSTAMGRMFFQILGSIAEFEHA  147
            V +LDRLGR++E+LI L  +L++R V +  L++NI  D S++ G+++F++++++AEFE+ 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  148  LMSErtldglaaarargrtggQKPKLTPRQAKIAQQMYEETGPDGRRVHTVEQIAAEFGV  207
            L+ ER+  G  AARARGR GG+  KL  R+  + + +Y++  P       +  IA +  V
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTP-------IKTIAEQWKV  172

Query  208  TRPTIYRHLAKLPAEA  223
            +R TIYR L KL  + 
Sbjct  173  SRTTIYRYLNKLNNQE  188

376) Maqu_0409 in NC_008740


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  119 bits (433),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 87/187 (47%), Positives = 131/187 (71%), Gaps = 3/187 (1%)

Query  1    MIIGYARVSTNDQNPELQVDALKKAGAEQIFQEKFTGTLRERPELSQCLRMLRQGDVLIV  60
            M IGYARVST  QN +LQ D L+  G E+IF++  +G+   RP L + +   R GD ++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLARSLKDLVEIVQDLQDRGIGFKSLTESI--DTTSSGGRLVFHIFGALAEFERDL  118
            W+LDRL+R++ DL+ +V++L++RG++F SL E+I  D +SS G+L+FH+F+A+AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTIaglqaarargrkggrKPTLSDTDIKKAAAMLLDPSITKKEVAEHFRVSRTTLNA  178
            I ER+ AG  AARARGR GGR   L+  D+    + L D +   K +AE+ +VSRTT+  
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKT-LYDNGTPIKTIAEQWKVSRTTIYR  179

Query  179  ALKRIAD  185
             L+++ +
Sbjct  180  YLNKLNN  186

377) RLO149_c010810 in NC_015730


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  119 bits (434),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 82/179 (46%), Positives = 122/179 (69%), Gaps = 4/179 (2%)

Query  19   IGYARVSTENQKLDMQLDALQRAGCARIYYDHGVSGAKADRPGLDEALNTLGEGDTLVVY  78
            IGYARVST  Q+L++Q D L+  GC +I+ DH +SG+K+ RPGLD A++    GDT+VV 
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  79   KLDRLGRSVLHLTDLISRLDNEGIQFCSLTEGI--DTTTLGGKLVYHVFAAVSEFSRNLI  136
            +LDRLGR++ +L  L++ L++ G+ F SL E I  D ++  G+L++H+FAA +EF RNLI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  137  RENTMAGLKAARERGSKIGRPHLLSDDDVIEAHRCVHQDGKSIREIAARFDVSESTIQR  195
             E + AG  AAR RG   GRP+ L+  D+    + + ++G +I+ IA +  VS +TI R
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLT-LLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

378) SM11_chr0357 in NC_017325


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  118 bits (431),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 121/180 (68%), Gaps = 3/180 (1%)

Query  4    IGYARVSTRDHTVAAQLDELQKVECARIFEETASKANRDRPQLAAALDYMREGDTLVVWK  63
            IGYARVST  + +  Q D L+   C +IF++  S ++  RP L  A+++ R GDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLARSLKQLIETVEALEDRGIGFRSLTEAI--DTTKAGGGLVVQIFGALAEFERGVIR  121
            LDRL+R++ +LI  V+ L++RG++F+SL E I  D + + G L+ ++F+A+AEFER +I 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTRAGLNAARSrgrkggrppkLKASDLEAAKVLLADREINVEDVARRLGVSPATLYRYI  181
            ER+ AG  AAR+RGR GGRP KL+  DL   K L  D    +  +A +  VS +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYRYL  181

379) M301_2190 in NC_014207


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  118 bits (430),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 75/187 (41%), Positives = 122/187 (66%), Gaps = 6/187 (3%)

Query  11   NIGYARVSTADQDTARQLEALHQLGIDRLFEDKASGKDINRPALVEAMKYARTGDTLVVH  70
            +IGYARVST+ Q+   Q + L+  G +++F+D  SG   +RP+L  A+ +AR+GDT+VV 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  71   SLDRLARNLVDLLNIVEDLTARGVSVKFLKENLVFTTSEADPFSKLTLQMLGAFAQFERS  130
             LDRL+RN+ DL+ +V++L  RGVS   L EN+    S +   ++L +++++AFA+FER+
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSST--GQLLFHLFAAFAEFERN  119

Query  131  LIRERQREGIAIAKLAGAFKGRKQALNDEQVKELVSLDTV-NHGKNRTALAAQFGISRNS  189
            LI ER   G   A+  G + GR + LN    ++L  L T+ ++G    ++A Q  +SR +
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNK---RDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  190  LYRYLER  196
            +YRYL++
Sbjct  177  IYRYLNK  183

380) Celgi_0231 in NC_015671


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  118 bits (429),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 95/182 (53%), Positives = 136/182 (75%), Gaps = 3/182 (1%)

Query  5    LGYARVSTadqdaalqidalNRAGCYRVFVDTISGSLQQRPELDKLLDQLRPGDTLVVWR  64
            +GYARVST+ Q+  LQ D LN  GC ++F D +SGS  +RP LDK ++  R+GDT+VVWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSIRHLIDQLQVLSDRGVGFRSLQETI--DTTSPGGRLVFHVFAALAEFERDLIR  122
            LDRLGR++ +LI  ++ L++RGV+F+SL+E I  D +S+ G+L+FH+FAA+AEFER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTNagleaarargrtggrPSALSGDQVRAARRMYEQKDMTVAQIGEVLGVSRTTIYRAL  182
            ER++AG  AARARGR GGRP  L+  ++   + +Y++ +  +  I+E   VSRTTIYR L
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYRYL  181

Query  183  NR  184
            N+
Sbjct  182  NK  183

381) cgR_0135 in NC_009342


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  118 bits (429),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 123/186 (67%), Gaps = 6/186 (3%)

Query  4    IGYMWVSKADGSQTTDLQRDALIKAGVDPDHMYEDNASGKKEDRPELASCLKALRAGDTL  63
            IGY +VS   G Q  +LQ D L   G +   +++D+ SG K  RP L   +   R+GDT+
Sbjct  3    IGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  64   LVWKLDRLGRNLRHLVNVVHDLTARGVGLKVLTGQGAAIDTTSAQGKLVFGIFAALAEFE  123
            +VW+LDRLGRN+ +L+ +V++L  RGV++  L  +  ++D +S+ G+L+F +FAA+AEFE
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAEFE  117

Query  124  RELISERTKAGLESARARGRKGGRPFKMTPAKVRLAMASMGQTETSVAALCKELGITRQT  183
            R+LI ER+ AG  +ARARGR GGRP K+    + L + ++ +  T++ ++  +  ++R T
Sbjct  118  RNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSRTT  176

Query  184  LYRHVS  189
            +YR ++
Sbjct  177  IYRYLN  182

382) Dd586_1782 in NC_013592


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 87/181 (49%), Positives = 130/181 (72%), Gaps = 2/181 (1%)

Query  1    MLIGYARVSTSDQNTELQKNALNSANCELIFEDQASGKNARRPGLKRALRKLKRGDTLIV  60
            M IGYARVST+ QN +LQ + LN+  CE IF+D+ SG +++RPGL +A+   + GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVRDLITMVSDLQSRGIHFRSLTDAI--DTSTPAGRFFFHVMSALAEMEREL  118
            W+LDRLGR++ DLIT+V++L+ RG+ F+SL + I  D S+++G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIErtraglaaakaagriggrrrIMTPDAIDHAKTLLSNGATRWQIANIIGVSAKTIYKY  178
            I+ER+ AG  AA+A GR GGR   +    +   KTL  NG+    IA+   VS  TIY+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  F  179
            +
Sbjct  181  L  181

383) UMNK88_931 in NC_017641


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (428),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 89/179 (50%), Positives = 128/179 (72%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQRSALNCAGCERIFEDKISGTKSDRPGLKKLLRTLSAGDTLVV  60
            M IGY RVST  QN +LQ   LN  GCE+IF+D +SG+KS RPGL K +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEELRQCGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL++EL + GV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgrvggrrPKLTTEQWAQIGRLLEAGESRQRIALIFDVGVSTIYR  177
            I+ER+ AG  AARA+GR GGR  KL   + + +  L + G + + IA    V+ +TIYR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

384) pin in NC_014500


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (428),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 86/182 (48%), Positives = 128/182 (71%), Gaps = 2/182 (1%)

Query  1    MLIGYARVSTSDQNTELQKNALVGANCELIFEDQASGKNARRPGLKRALRKLKRGDTLIV  60
            M IGYARVST+ QN +LQ + L    CE IF+D+ SG +++RPGL +A+   + GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVRDLITMVSDLQGRGIHFRSLTDAI--DTSTPAGRFFFHVMSALAEMEREL  118
            W+LDRLGR++ DLIT+V++L+ RG+ F+SL + I  D S+++G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTraglaaaraagriggrrriMTPDAIEHARTLLTNGATRWQIANIIGVSEKTIYKY  178
            I+ER+ AG  AARA GR GGR   +    +   +TL  NG+    IA+   VS  TIY+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  FP  180
            + 
Sbjct  181  LN  182

385) Nwat_2408 in NC_014315


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (427),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 84/179 (47%), Positives = 123/179 (69%), Gaps = 2/179 (1%)

Query  1    MRIGYARVSTNEQLLDLQLDALRKAGCERIFTDQASGSKINRPGLADALSHLRPDDGLVV  60
            M+IGYARVST  Q L+LQ D L   GCE+IF D+ SGSK +RPGL  A+   R++D +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKPDRLGRTMKGLVDFISELAEREVQFCSLTDGI--DTATPTGRFFFHIMASLAQMEREL  118
            W+ DRLGR M +L+ +++EL ER V F SL + I  D +++TG+++FH+ A++A+ ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IAErtragllaarqrgrvggrkrQMTPSKIESARKLLNNGVPPQEVAKNLGISIPTLYR  177
            I ER+ AG +AAR RGR GGR  ++    +   + L +NG P + +A +  +S  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

386) Bcenmc03_6785 in NC_010512


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (428),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 87/192 (46%), Positives = 127/192 (67%), Gaps = 4/192 (2%)

Query  1    MKIGYARVSTDEQSLGLQIDALTRAGCDVVFSDQGISGGDFHRPGLDAALARIEKGDALV  60
            MKIGYARVST+ Q+L LQ D L   GC+ +F+D+ +SG+   RPGLD A+     GD++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLGRSLSKLIDLVNHLARRGIDFTSLTESI--NTASPGGRLVFHMMGALAEFERS  118
            VWRLDRLGR++  LI LVN+L  RG+ F SL E+I  + +S+ G+L+FH+ +A+AEFER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISErtraglaaarargkkigrrrQMTPDQCAHARVLLKTST-ITEVAAHFNVHPRTVKR  177
            LI ER+ AG  AARARG+  GR  ++   + +  + L   +T I  +A + +V   T+ R
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  178  ALAALADTDASE  189
             L  L + +  +
Sbjct  180  YLNKLNNQENKD  191

387) pin in NC_018139


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (427),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 82/179 (46%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  1    MLVGYARVSTVDQNLDLQLSALKEAGCEKLYQDQISGTKANRPGLSMALEVLRKHDTLVV  60
            M +GYARVST  QNL+LQ   L+  GCEK+++D++SG+K++RPGL  A+E  R  DT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRTVKGLIDLVNQLHQKEIHFKSITDNV--DTSTPAGRFFFHVMASLAQMEREL  118
            W+LDRLGR + +LI LVN+L+++ + F S+ +N+  D S+++G+++FH+ A++A+ ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  MAErtkaglaaakakgrvggrkrkMTQSKIESAKQLLASGTLPKDVAHDLGISVPTLYR  177
            + ER+ AG  AA+A+GR GGR  K+ +  +   K L  +GT  K +A++  +S  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

388) GYY_04310 in NC_015847


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (426),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 82/184 (45%), Positives = 123/184 (67%), Gaps = 3/184 (1%)

Query  1    MIIGYARVSTKDQKLERQIDELRKAGCEKIFLEKISGTKKNRPEFDRMFGVLRSGDIILV  60
            M IGYARVST  Q+L+ Q D L   GCEKIF + +SG+K +RP +D+ +   RSGD I+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TELTRISRSTKDLVEIVESCKSLGVEIKSLKES-WLDTTSAHGKLLFTIFAGLAEFERDL  119
              L R++R+  DL+ +V+  +  GV + SL E+  +D +S+ G+LLF +FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  ISERVKSGLNAARSRGRLGGRPQ-IDSEKVEMALKMYDSKEYTIKQILNATGISKFTLYN  178
            I ER  +G  AAR+RGR GGRP+ ++   + +   +YD+    IK I +   +S+ T+Y 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YLDK  182
            YL+K
Sbjct  180  YLNK  183

389) Zmob_1652 in NC_017262


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (427),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 77/187 (42%), Positives = 131/187 (71%), Gaps = 6/187 (3%)

Query  1    MLIGYMRVSSADDRQSVDLQRDALIAAGVDERNLFFDKASGAKDDRPGLKKCLEYLKSGD  60
            M IGY RVS++   Q+++LQ D L + G +  ++F D  SG+K  RPGL K +E+ +SGD
Sbjct  1    MKIGYARVSTG--LQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   ELIVWKLDRLGRSLPHLLSIITDLKARDIAFHSLTEQ--MNTNTPHGELLFSLFGALAQY  118
             ++VW+LDRLGR++ +L++++ +L+ R+++FHSL E+  M+ +++ G+LLF LF+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERALTRERIMAGLEAArkrgrrggrPPTIDKEQLEQIKIALESGASKASVCRSFKIPRST  178
            ER L  ER  AG  AAR RGR GGRP  ++K +L  +K   ++G++  ++    K++R+T
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LIDTLKR  185
            +   L++
Sbjct  177  IYRYLNK  183

390) ZZ6_1631 in NC_018145


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (427),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 77/187 (42%), Positives = 131/187 (71%), Gaps = 6/187 (3%)

Query  1    MLIGYMRVSSADDRQSVDLQRDALIAAGVDERNLFFDKASGAKDDRPGLKKCLEYLKSGD  60
            M IGY RVS++   Q+++LQ D L + G +  ++F D  SG+K  RPGL K +E+ +SGD
Sbjct  1    MKIGYARVSTG--LQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   ELIVWKLDRLGRSLPHLLSIITDLKARDIAFHSLTEQ--MNTNTPHGELLFSLFGALAQY  118
             ++VW+LDRLGR++ +L++++ +L+ R+++FHSL E+  M+ +++ G+LLF LF+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERALTRERIMAGLEAArkrgrrggrPPTIDKEQLEQIKIALESGASKASVCRSFKIPRST  178
            ER L  ER  AG  AAR RGR GGRP  ++K +L  +K   ++G++  ++    K++R+T
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LIDTLKR  185
            +   L++
Sbjct  177  IYRYLNK  183

391) ZMO1455 in NC_006526


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (427),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 77/187 (42%), Positives = 131/187 (71%), Gaps = 6/187 (3%)

Query  1    MLIGYMRVSSADDRQSVDLQRDALIAAGVDERNLFFDKASGAKDDRPGLKKCLEYLKSGD  60
            M IGY RVS++   Q+++LQ D L + G +  ++F D  SG+K  RPGL K +E+ +SGD
Sbjct  1    MKIGYARVSTG--LQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   ELIVWKLDRLGRSLPHLLSIITDLKARDIAFHSLTEQ--MNTNTPHGELLFSLFGALAQY  118
             ++VW+LDRLGR++ +L++++ +L+ R+++FHSL E+  M+ +++ G+LLF LF+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERALTRERIMAGLEAArkrgrrggrPPTIDKEQLEQIKIALESGASKASVCRSFKIPRST  178
            ER L  ER  AG  AAR RGR GGRP  ++K +L  +K   ++G++  ++    K++R+T
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LIDTLKR  185
            +   L++
Sbjct  177  IYRYLNK  183

392) CSSP291_01770 in NC_020260


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  117 bits (426),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 86/179 (49%), Positives = 124/179 (70%), Gaps = 2/179 (1%)

Query  1    MQIGYVRVSTNDQNTALQRNALECAGCELIFEDKMSGKTSDRPGLKKVLRTLSEGDTLVV  60
            M+IGY RVST  QN  LQ + L+  GCE IF+D MSG  S RPGL K +     GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVTLIEDLRGRGVNFRSLTDSI--DTSTPMGRFFFHVMGALAEMEREL  118
            W+LDRLGR+M +L+TL+++L  RGV+F+SL ++I  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarqqgriggrrPKLTEQQWAQAGRLLNAGESRKRVALIFDVGISTLYR  177
            I+ER+ AG  AAR +GR GGR  KL  ++ +    L + G + K +A    V+ +T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

393) MASS_1085 in NC_021282


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 84/183 (46%), Positives = 127/183 (70%), Gaps = 3/183 (1%)

Query  1    MLIGYARVSTAEQSTDLQLDALHGAHVEQVFTDEGISGSVSSRPELDRCLAHLREGDTLV  60
            M IGYARVST+ Q+ +LQ D L+    E++F D+ +SGS S RP LD+ +   R GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWRLDRLARSLKNLLELVESVSQRGIHLRSLTEAI--DTSSASGRLVLSVFGALAEFERS  118
            VWRLDRL+R++ +L+ LV+ +++RG+ ++SL E I  D SS++G+L++ +F+A+AEFER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIIERTQaglaaarlrgarigrPTAMNVGQIEQARTLVSAGHRVPDVARTLGVGRSTLYR  178
            LI+ER+ AG  AAR RG   GRP  +N  ++   +TL   G  +  +A    V+R+T+YR
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  179  ALG  181
             L 
Sbjct  180  YLN  182

394) Thivi_0196 in NC_018012


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 84/185 (46%), Positives = 127/185 (69%), Gaps = 6/185 (3%)

Query  1    MDIGYARVSTKDQSLDLQVDALRRAGCAKVYQEVVSGAKVPRPVLDTLLGELRPGDVLVI  60
            M IGYARVST  Q+L+LQ D L   GC K++++ +SG+K  RP LD  +   R+GD +V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSLRHLVELAGVLLEQQVGLKSLND--PLDTTTSQGRLVFNLFAALAEFEKDL  118
            W+LDRLGR++ +L+ L   L E+ V++ SL++   +D ++S G+L+F+LFAA+AEFE++L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQaglvaarargrlggrPKGLPPEAEKTACAAETLYRERRLSVREIAAQLGIAKST  178
            I ER+ AG +AARARGR GGRP  L     +      TLY +   +++ IA Q  ++++T
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKL---NKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTT  176

Query  179  LYDYL  183
            +Y YL
Sbjct  177  IYRYL  181

395) Thivi_1340 in NC_018012


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 84/185 (46%), Positives = 127/185 (69%), Gaps = 6/185 (3%)

Query  1    MDIGYARVSTKDQSLDLQVDALRRAGCAKVYQEVVSGAKVPRPVLDTLLGELRPGDVLVI  60
            M IGYARVST  Q+L+LQ D L   GC K++++ +SG+K  RP LD  +   R+GD +V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSLRHLVELAGVLLEQQVGLKSLND--PLDTTTSQGRLVFNLFAALAEFEKDL  118
            W+LDRLGR++ +L+ L   L E+ V++ SL++   +D ++S G+L+F+LFAA+AEFE++L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQaglvaarargrlggrPKGLPPEAEKTACAAETLYRERRLSVREIAAQLGIAKST  178
            I ER+ AG +AARARGR GGRP  L     +      TLY +   +++ IA Q  ++++T
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKL---NKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTT  176

Query  179  LYDYL  183
            +Y YL
Sbjct  177  IYRYL  181

396) Thivi_4374 in NC_018012


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 84/185 (46%), Positives = 127/185 (69%), Gaps = 6/185 (3%)

Query  1    MDIGYARVSTKDQSLDLQVDALRRAGCAKVYQEVVSGAKVPRPVLDTLLGELRPGDVLVI  60
            M IGYARVST  Q+L+LQ D L   GC K++++ +SG+K  RP LD  +   R+GD +V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSLRHLVELAGVLLEQQVGLKSLND--PLDTTTSQGRLVFNLFAALAEFEKDL  118
            W+LDRLGR++ +L+ L   L E+ V++ SL++   +D ++S G+L+F+LFAA+AEFE++L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQaglvaarargrlggrPKGLPPEAEKTACAAETLYRERRLSVREIAAQLGIAKST  178
            I ER+ AG +AARARGR GGRP  L     +      TLY +   +++ IA Q  ++++T
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKL---NKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTT  176

Query  179  LYDYL  183
            +Y YL
Sbjct  177  IYRYL  181

397) ARUE_232p00350 in NC_018532


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 85/191 (45%), Positives = 130/191 (69%), Gaps = 10/191 (5%)

Query  1    MRIGYGRVSTHDQHPQSQHDALTAAGCEQIFLDTASGKLARRPELDKALLSANRPGDQLV  60
            M+IGY+RVST  Q+ + Q+D L + GCE+IF D  SG  ++RP LDKA +   R+GD +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKA-IEFARSGDTIV  59

Query  61   VTKLDRLGRSLENLIDLSNTLQKRGVDLVVLDQGI--DTSTALGRMFFQILGSIAEFEHA  118
            V +LDRLGR++E+LI L N L+ RGV +  L++ I  D S++ G+++F++++++AEFE+ 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LMSErtrdglaaarargrtggQKPKLGPRQVRLAREMYEEKGPDGKRAHTVEHIAQEFGV  178
            L+ ER+  G  AARARGR GG+  KL  R++ L + +Y++  P       +  IA++  V
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTP-------IKTIAEQWKV  172

Query  179  TRPTIYRHLAK  189
            +R TIYR L K
Sbjct  173  SRTTIYRYLNK  183

398) Sinme_6651 in NC_015597


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 62/149 (42%), Positives = 105/149 (71%), Gaps = 3/149 (2%)

Query  1    MLIGYARVSKGDEQSNKAQARALSEAGCKRVFEEKASGGRWDRPELHRMLDQLRDGDTVV  60
            M IGYARVS G ++ N  + R L+  GC ++F++  SG++  RP L++ ++  R GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDR-LNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWKLDRLSRSLKDVLHLMDRITSAGAGFRSLTEAI--DTTTAAGRMMMQMVGSFAEFERA  118
            VW+LDRL+R++ D++ L++ +   G +F+SL E I  D ++++G+++ ++ ++FAEFER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  MIRERTTTGLAQARAEGRIGGRRKKLDPK  147
            +I ER+++G   ARA GR GGR  KL+ +
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKR  148

399) AARI_08090 in NC_014550


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  116 bits (425),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 94/187 (51%), Positives = 136/187 (73%), Gaps = 3/187 (1%)

Query  5    LGYARVsttdqdaqlqldalsaaGCYRIFTDTASGALESRPELDKLLDQIRPGDTLVVWR  64
            +GYARVST  Q+ +LQ D L++ GC +IF D  SG+   RP LDK ++  R+GDT+VVWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSIRHLINHMDALQQRGIEFKSLQESI--DTSSSGGRLVFNIFASLAEFERDLIR  122
            LDRLGR++ +LI  ++ L++RG+ F SL+E+I  D SSS G+L+F++FA++AEFER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTNaglqaarargrtggrPASLSPDKLRTAKRLYEQRDMTVTQIGEVLGVSRSTVYRAL  182
            ER++AG  AARARGR GGRP  L+   L   K LY++ +  +  I+E   VSR+T+YR L
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYRYL  181

Query  183  GKAKKNQ  189
             K ++++
Sbjct  182  NKLNNQE  188

400) PSPPH_B0057 in NC_007275


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  116 bits (425),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 92/192 (48%), Positives = 131/192 (69%), Gaps = 3/192 (1%)

Query  1    MLIGYARVSTddqlldlqrdalEKAGCERVFEDTASGAKAERIGLTALLATLRRGDTVVI  60
            M IGYARVST+ Q L+LQ D L+  GCE++F+D  SG+K+ R GL   +   R GDT+V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKDLIRLVEQLDAAGVGLRSLQESI--DTASIGGRLVFHLFGALAEFERNL  118
            WRLDRLGR++ DLI LV++L+  GV+++SL+E+I  D +S  G+L+FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTQAGLSaarargrkggrkkrLDPAKQELAMRLYHERKHTVAEICRLMGIGRSTLYN  178
            I ER+ AG  AARARGR GGR  +L+     L   LY +    +  I     ++R+T+Y 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  179  YLTEAERNAQRA  190
            YL   + + ++ 
Sbjct  180  YLNKLNNQENKD  191

401) H924_13205 in NC_020553


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  116 bits (425),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 76/186 (41%), Positives = 122/186 (66%), Gaps = 6/186 (3%)

Query  4    IGYMRVSKSDGSQTTDLQRDALIAAGVEPGHLYEDKASGKQEDRPHLDACLKALRPGDTL  63
            IGY RVS   G Q  +LQ D L + G E   +++D  SG +  RP LD  +   R+GDT+
Sbjct  3    IGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  64   LVWKLDRLGRNLRHLVNIVHDLTAREVGLKVLTGQGAAIDTTSAQGKLVFGIFAALAEFE  123
            +VW+LDRLGRN+ +L+ +V++L  R V++  L  +  ++D +S+ G+L+F +FAA+AEFE
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAEFE  117

Query  124  RELISERTKAGLESARARGRKGGRPFKMTPAKVRLAMASMGQPETNVAALCKELGITRQT  183
            R+LI ER+ AG  +ARARGR GGRP K+    + L + ++ +  T + ++  +  ++R T
Sbjct  118  RNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSRTT  176

Query  184  LYRHVS  189
            +YR ++
Sbjct  177  IYRYLN  182

402) CtCNB1_3813 in NC_013446


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 87/181 (49%), Positives = 126/181 (70%), Gaps = 3/181 (1%)

Query  4    IGYARVSTHEQSLDLQRDELKRVGAEVIYEDCASGKTAERPELQHCLKALRAGDTLTVWR  63
            IGYARVST  Q+L+LQ D L+  G E I++D  SG  + RP L+  +   R+GDT+ VWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRNLQDLIRIVTELEAKGVTFKSLKESI--DTRGPAGKLVFHMFGALAQFERELLR  121
            LDRLGRN++DLI +V EL+ +GV+F SL E+I  D  +++G+L+FH+F+A+A+FER+L+ 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERTMAGLDAArsrgrkggrppslspAQKNMALSLIKSGDLGISEIGKQFGVSRSTLYNLM  181
            ER+ AG  AAR+RGR GGRP  L+  +  +  +L  +G   I  I+ Q  VSR+T+Y  +
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRYL  181

Query  182  T  182
             
Sbjct  182  N  182

403) inv in NC_013716


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/179 (48%), Positives = 130/179 (73%), Gaps = 2/179 (1%)

Query  4    IGYIRVSTIDQNSDLQRNALISANCDHIFEDRMSGKVANRPGLKRALKRINSGDTLVVWK  63
            IGY RVST  QN +LQ + L +  C+ IF+D+MSG  ++RPGL +A+    SGDT+VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLGRSVKNLVSLISELHERGAHFRSLTDSI--DTSSAMGRFFFHVMSALAEMERELIV  121
            LDRLGR++ +L++L++EL+ERG  F+SL ++I  D SS+ G+++FH+ +A+AE ER+LI+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ErtvaglaaarakgrtggrpkaLQPHEREQIARLLDKGHTRKQLSIIYDVGLSTLYRYF  180
            ER+ AG  AARA+GR GGRP  L+ ++   +  L D+G   K ++    V+ +T+YRY+
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

404) CDBH8_0918 in NC_016800


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/182 (47%), Positives = 123/182 (68%), Gaps = 2/182 (1%)

Query  1    MLIGYARVStadqdltlqldaltaaGCDKIFTDKASGTKANRDGLAEALAYARQGDCLVV  60
            M IGYARVST+ Q+L LQ D L + GC+KIF D  SG+K++R GL  A+ +AR GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMKGLVDLAADLESRKVDLRSLTDGI--DTKTAAGRFFFHVMAALAVMEREL  118
            W+LDRLGR+M +L+ L  +L+ R V ++SL + I  D  +++G+++FH+ AA+A  ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ILERTKAGLDaakragrvggrrraMTPAKMDAARKLLEGGTPPKDVATSIGVSVATLYRY  178
            ILER+ AG  AA+  GR GGR   +    +   + L + GTP K +A    VS +T+YRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  FP  180
            + 
Sbjct  181  LN  182

405) resP in NC_005791


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 83/184 (46%), Positives = 124/184 (68%), Gaps = 3/184 (1%)

Query  1    MIIGYARVSTKDQNLERQLDELKKAGSEKIFLEKISGTKRNRPEFDKMFDILRAGDIIIV  60
            M IGYARVST  QNL+ Q D L+  G EKIF + +SG+K +RP +DK +++ R+GD I+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TELTRISRSTKDLVEIVESCKSLGVEIKSLKES-WLDTTSAHGKLLFTIFAGLAEFERDL  119
              L R++R+  DL+ +V+  +  GV + SL E+  +D +S+ G+LLF +FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  ISERVKSGLNAARSRGRLGGRP-KIDSEKVEMALKMYDSKEYTIKQILKATGISKFTLYN  178
            I ER  +G  AAR+RGR GGRP K++   + +   +YD+    IK I     +S+ T+Y 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YLEK  182
            YL+K
Sbjct  180  YLNK  183

406) invA in NC_017955


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 80/189 (43%), Positives = 120/189 (64%), Gaps = 2/189 (1%)

Query  3    MVGYARVSTFEQDPALQHDALTAAGAVRVFTDYASGATAARPQLIACLDFLRPGDTLAVW  62
             +GYARVST  Q+  LQ+D L + G  ++F D  SG+ + RP L   ++F R+GDT+ VW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   RIDRLGRSVADLTTIVNDLGARGIQFPSLTEAI--DTTTVGGELVFHIFAAVAQMERRLI  120
            R+DRLGR++ DL T+VN+L  RG+ F SL E I  D ++  G+L+FH+FAA A+ ER LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  SERTraglaaarargragrrPTVMTPERLIAAQAMRAQGMTLIQIAATLGIGRSSLVRGL  180
             ER+ AG  AARARGR G RP  +    L   +++  +G  +  IA    ++R+++ R L
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  181  AQASAEPDS  189
             + + + + 
Sbjct  182  NKLNNQENK  190

407) D11S_2321 in NC_014629


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 76/181 (42%), Positives = 117/181 (65%), Gaps = 2/181 (1%)

Query  1    MLVGYARVSTKEQNYEMQIQALRNAGCEKIFSEKESGNSDDRREFKKTLTFLREGDTLIV  60
            M +GYARVST  QN ++Q + L   GCEKIF++  SG+   R  + K++ F R GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVSQSSRVLETLKEKKVSVVSLIENI--DTRTIFGEWLFYFASIFAEMERNS  118
            W+LDRLGR++ +   +++ L+E+ VS  SL ENI  D  +  G+ LF + + FAE ERN 
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTKAGIKFAREQGVRIGRPPKMTEDNIEIIRELLKAGWTVKKIAEKLGISQSSIYAY  178
            I+ER+ AG   AR +G   GRP K+   ++ +++ L   G  +K IAE+  +S+++IY Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  F  179
            +
Sbjct  181  L  181

408) SAI5S5_20220 in NC_020535


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 121/186 (66%), Gaps = 4/186 (2%)

Query  28   NIGYARVSTRDQSLDLQIDALSNFGCEKIFSEKVSGRKVNRTELDKCLDYLREGDTLVIY  87
            +IGYARVST  Q+L+LQ D L+  GCEKIF++ +SG K +R  LDK +++ R GDT+V+ 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  88   KLDRLGRTTKQLIDLAQWLENNNIELQIIDMNI--NTKDPMGKMFFTMMSAFAELEANLL  145
            +LDRLGR   +LI L + L++  + ++ ++ NI  +   + G+++F + +AFAE+E NL+
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  146  SERTKKGLESARARGNMGGRKAMPQEKK-EYIKHLYDTKEYTGQEIAKKTNVSRDTVYRI  204
             ER+  G  +ARARG  GGR    + +    +K LYD      + IA + +VSR T+YR 
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRY  180

Query  205  LREFKK  210
            L  +++
Sbjct  181  LNKLNN  186

409) SAUSA300_pUSA030028 in NC_007792


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 121/186 (66%), Gaps = 4/186 (2%)

Query  28   NIGYARVSTRDQSLDLQIDALSNFGCEKIFSEKVSGRKVNRTELDKCLDYLREGDTLVIY  87
            +IGYARVST  Q+L+LQ D L+  GCEKIF++ +SG K +R  LDK +++ R GDT+V+ 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  88   KLDRLGRTTKQLIDLAQWLENNNIELQIIDMNI--NTKDPMGKMFFTMMSAFAELEANLL  145
            +LDRLGR   +LI L + L++  + ++ ++ NI  +   + G+++F + +AFAE+E NL+
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  146  SERTKKGLESARARGNMGGRKAMPQEKK-EYIKHLYDTKEYTGQEIAKKTNVSRDTVYRI  204
             ER+  G  +ARARG  GGR    + +    +K LYD      + IA + +VSR T+YR 
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRY  180

Query  205  LREFKK  210
            L  +++
Sbjct  181  LNKLNN  186

410) res in NC_002774


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 121/186 (66%), Gaps = 4/186 (2%)

Query  3    NIGYARVSTRDQSLDLQIDALSNFGCEKIFSEKVSGRKVNRTELDKCLDYLREGDTLVIY  62
            +IGYARVST  Q+L+LQ D L+  GCEKIF++ +SG K +R  LDK +++ R GDT+V+ 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KLDRLGRTTKQLIDLAQWLENNNIELQIID--MNINTKDPMGKMFFTMMSAFAELEANLL  120
            +LDRLGR   +LI L + L++  + ++ ++  + ++   + G+++F + +AFAE+E NL+
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  SERTKKGLESARARGNMGGRKAMPQEKK-EYIKHLYDTKEYTGQEIAKKTNVSRDTVYRI  179
             ER+  G  +ARARG  GGR    + +    +K LYD      + IA + +VSR T+YR 
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRY  180

Query  180  LREFKK  185
            L  +++
Sbjct  181  LNKLNN  186

411) Arth_4386 in NC_008537


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 93/177 (53%), Positives = 129/177 (73%), Gaps = 3/177 (1%)

Query  21   LGYARVSTGdqdaalqqdalkaaGCYRVFTDTASGSLESRPELTKVLDQLRPGDTLVVWR  80
            +GYARVSTG Q+  LQ+D L++ GC ++F D  SGS   RP L K ++  R+GDT+VVWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  81   LDRLGRSIRHLIDQLAGLQERGIGFRSLQEAI--DTTSSGGRLVFHVFAALAEFERDLIR  138
            LDRLGR++ +LI  +  L+ERG++F+SL+E I  D +SS G+L+FH+FAA+AEFER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  139  ERTNaglqaarargrvggrPPLLTKDKLRTARRMYEQKDMTVEKIGEVLGVSRTTVY  195
            ER++AG  AARARGR GGRP  L K  L   + +Y++ +  +  I+E   VSRTT+Y
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIY  178

412) AZL_f00900 in NC_013860


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 93/187 (50%), Positives = 131/187 (71%), Gaps = 3/187 (1%)

Query  1    MLIGYARVSTDDQNLHLQRDALRVTGCEKIFEDRRGGAKTDRPglaaalgtarrgDTLVV  60
            M IGYARVST+ QNL+LQ D L   GCEKIF+D+ +G+K+ RPGL  A+  AR GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WRLDRLGRSLKDLIQLAEQLDAAGIGLRSLHDAI--DTGSSGGRLVFHMFGALAEFERNL  118
            WRLDRLGR++ DLI L ++L+  G++++SL++ I  D +SS G+L+FH+F+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  VRERTQaglsaarargrmggrrKVLEPDKRRLAVQLYQERKHTVMEICRLMGISKPTLYA  178
            + ER+ AG  AARARGR GGR   L+     L   LY++    +  I     +S+ T+Y 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYR  179

Query  179  YVEEMAG  185
            Y++ +  
Sbjct  180  YLNKLNN  186

413) BN4_10636 in NC_020409


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 85/188 (46%), Positives = 132/188 (71%), Gaps = 6/188 (3%)

Query  1    MKIGYARVSKADGSQNLDLQRDALLKAGVPAKRIYEDMASGKKGKRPGLDACLKALRQGD  60
            MKIGYARVS   G QNL+LQ D L   G    +I++D  SG K+KRPGLD  +   R GD
Sbjct  1    MKIGYARVST--GLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   ILLIWKLDRLGRDLKHLVCVVQELAEKDIGFKVLTGRGADIDTTSASGKLIFGIFAALAE  120
             +++W+LDRLGR++ +L+ +V+EL E++++F  L      +D +S++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEE-NITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIRERTMagleaarargrkggrrfaLNKTQVQMAQAAMKNKTTSVRNLCKELGVTR  180
            FER+LI ER+ AG  AARARGR GGR   LNK ++ + + ++ ++ T+++ +  +  V+R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVS  188
             T+YRY++
Sbjct  175  TTIYRYLN  182

414) Arth_4459 in NC_008537


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 82/191 (43%), Positives = 130/191 (69%), Gaps = 10/191 (5%)

Query  1    MRIGYGRVSTRDQHPEAQHDALTAAGCDQVYIDTASGKLSRRPELDKALLSANREGDQLV  60
            M+IGY+RVST  Q+ + Q+D L + GC++++ D  SG  S+RP LDKA +   R GD +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKA-IEFARSGDTIV  59

Query  61   VTKLDRLGRSLEHLIDLSKTLQERGVDLIVLDQGI--DTSTAIGRMFFQILGSIAEFEHA  118
            V +LDRLGR++E+LI L + L+ERGV +  L++ I  D S++ G+++F++++++AEFE+ 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LMSErtrdglaaarargrtggQKPKLGPRQVRLAREMYEEKNADGKRAHTVEHIAQEFGV  178
            L+ ER+  G  AARARGR GG+  KL  R++ L + +Y++       +  +  IA++  V
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-------GTPIKTIAEQWKV  172

Query  179  TRPTIYRHLAK  189
            +R TIYR L K
Sbjct  173  SRTTIYRYLNK  183

415) Arth_4290 in NC_008538


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 82/191 (43%), Positives = 130/191 (69%), Gaps = 10/191 (5%)

Query  1    MRIGYGRVSTRDQHPEAQHDALTAAGCDQVYIDTASGKLSRRPELDKALLSANREGDQLV  60
            M+IGY+RVST  Q+ + Q+D L + GC++++ D  SG  S+RP LDKA +   R GD +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKA-IEFARSGDTIV  59

Query  61   VTKLDRLGRSLEHLIDLSKTLQERGVDLIVLDQGI--DTSTAIGRMFFQILGSIAEFEHA  118
            V +LDRLGR++E+LI L + L+ERGV +  L++ I  D S++ G+++F++++++AEFE+ 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LMSErtrdglaaarargrtggQKPKLGPRQVRLAREMYEEKNADGKRAHTVEHIAQEFGV  178
            L+ ER+  G  AARARGR GG+  KL  R++ L + +Y++       +  +  IA++  V
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-------GTPIKTIAEQWKV  172

Query  179  TRPTIYRHLAK  189
            +R TIYR L K
Sbjct  173  SRTTIYRYLNK  183

416) Arth_4190 in NC_008539


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 82/191 (43%), Positives = 130/191 (69%), Gaps = 10/191 (5%)

Query  1    MRIGYGRVSTRDQHPEAQHDALTAAGCDQVYIDTASGKLSRRPELDKALLSANREGDQLV  60
            M+IGY+RVST  Q+ + Q+D L + GC++++ D  SG  S+RP LDKA +   R GD +V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKA-IEFARSGDTIV  59

Query  61   VTKLDRLGRSLEHLIDLSKTLQERGVDLIVLDQGI--DTSTAIGRMFFQILGSIAEFEHA  118
            V +LDRLGR++E+LI L + L+ERGV +  L++ I  D S++ G+++F++++++AEFE+ 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LMSErtrdglaaarargrtggQKPKLGPRQVRLAREMYEEKNADGKRAHTVEHIAQEFGV  178
            L+ ER+  G  AARARGR GG+  KL  R++ L + +Y++       +  +  IA++  V
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-------GTPIKTIAEQWKV  172

Query  179  TRPTIYRHLAK  189
            +R TIYR L K
Sbjct  173  SRTTIYRYLNK  183

417) Ppro_3670 in NC_008607


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 56/139 (41%), Positives = 104/139 (75%), Gaps = 2/139 (1%)

Query  4    IGYARVSTSGQSLEVQLDQLQAAGCERLYQEKISGADSARPELAIMLDYVRQNDVVVVCK  63
            IGYARVST+ Q+L++Q D+L++ GCE+++++ +SG+ S RP L   +++ R  D +VV +
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  64   LDRLARSTKHLLEIVEVLEGKGVALRIL--NINLDTGTPTGKMMLTMLAAIGQFEREMML  121
            LDRL+R+  +L+ +V+ L+ +GV+++ L  NI +D +++TG++++ ++AA+++FER+++L
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  122  ERQRDGIAKAKEEGKYKGR  140
            ER   G   A+  G+Y GR
Sbjct  123  ERSSAGRIAARARGRYGGR  141

418) tnpR2 in NC_019425


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  114 bits (417),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 125/186 (68%), Gaps = 4/186 (2%)

Query  1    MIIGYARVSKDEQHLDRQLDQLKKYGVEKIIKEKYTGTKKSRPGIEELLKIIRTNDTVVV  60
            M IGYARVS + Q+L+ Q D+L+  G EKI+++  +G+K  RPG++  + + R+ DT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   ESISRLGRNTLDILTLLQHLEKEKVEFISLKEN--MDTSTPTGKAMLQMMSVIAELERNL  118
              + RLGRN  D++TL+++L+   V F SL EN  MD S++TG+ ++++ + +AE+ERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  LAERVKEGITASRRRGVNIGRP-KIPQEKLNLAMRMYDSGDYSIKEILESTTISQGTLYR  177
            + ER   G  A+R RG   GRP K+ +  L L   +YD+G  +IK I E   +S+ T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  178  EINKMK  183
             +NK++
Sbjct  180  YLNKLN  185

419) Cfla_0348 in NC_014151


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 90/177 (51%), Positives = 128/177 (73%), Gaps = 3/177 (1%)

Query  15   LGYARVSTTDQDASLQVDALTKAGCYRVFVDTGSGSLQHRPELDKLLDQLRPGDTLVVWR  74
            +GYARVST  Q+ +LQ D L   GC ++F D  SGS   RP LDK ++  R+GDT+VVWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  75   LDRLGRSIRHLIDQLQVLADRGVGFRSLQETI--DTTSPGGRLVFHVFAALAEFERDLIR  132
            LDRLGR++ +LI  ++ L +RGV+F+SL+E I  D +S+ G+L+FH+FAA+AEFER+LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  133  ERTNaglaaarargrsggrpsalsaDQVRAARRIYEQKDMTVAQIGQVLGVSRTTIY  189
            ER++AG  AARARGR GGRP  L+  ++   + +Y++ +  +  I++   VSRTTIY
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIY  178

420) Paes_2392 in NC_011061


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 88/184 (48%), Positives = 129/184 (71%), Gaps = 5/184 (2%)

Query  12   IGYARVSTGGQELHSQIDALKKAGVPEKLIFIDKASGAKSERPGLDSCMQELQAGDTLVI  71
            IGYARVSTG Q+L+ Q D L+  G     IF D  SG+KS RPGLD  ++  ++GDT+V+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  72   WRLDRLGRSLKHLIETVEQLMERGVGFRSISDG-GIDTTTASGEMVFNIFATLAQFERRL  130
            WRLDRLGR++ +LI  V++L ERGV+F+S+ +   +D ++++G+++F++FA++A+FER L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  131  IQERTQaglkaarargrkggrPKISANDPKVKMAKKLSKNYNISIGEICNTLKISRATYY  190
            I ER+ AG  AARARGR GGRP    N   + + K L  N   +I  I +  K+SR+T Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIY  178

Query  191  RFLK  194
            R+L+
Sbjct  179  RYLN  182

421) Maqu_4154 in NC_008738


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 87/187 (47%), Positives = 130/187 (70%), Gaps = 3/187 (1%)

Query  1    MIIGYARVSTNDQNPELQVDALKKAGAEQIFQEKFTGTLRERPELSQCLRTLRQGDVLIV  60
            M IGYARVST  QN +LQ D L+  G E+IF++  +G+   RP L + +   R GD ++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLARSLKDLVEIVQDLQDRGIGFKSLTESI--DTTSSGGRLVFHIFGALAEFERDL  118
            W+LDRL+R++ DL+ +V++L++RG++F SL E+I  D +SS G+L+FH+F+A+AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTMagleaarargrkggrKPSLSKTDTQKAAAMLLDPKITKTEVAQHFGVSRTTLNA  178
            I ER+ AG  AARARGR GGR   L+K D     ++  +    KT +A++  VSRTT+  
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTTIYR  179

Query  179  SLARLKK  185
             L +L++
Sbjct  180  YLNKLNN  186

422) Paes_1093 in NC_011059


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  114 bits (417),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 80/184 (44%), Positives = 121/184 (66%), Gaps = 5/184 (2%)

Query  12   IGYARVSTGGQELHSQIDALKKAGVPEKLIFIDKASGAKSERPGLDSCMQELQAGDTLVI  71
            IGYARVSTG Q+L+ Q D L+  G     IF D  SG+KS RPGLD  ++  ++GDT+V+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  72   WRLDRLGRSLKHLIETVEGLMERGVGFRSISDG-GIDTTTASGEMVFNIFATLAQFERRL  130
            WRLDRLGR++ +LI  V+ L ERGV+F+S+ +   +D ++++G+++F++FA++A+FER L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  131  IQERTQAGLKaarargrrggrPKISANDPKVKMAKKLSKNYNISIGEICNTLKISRATYY  190
            I ER+ AG + A     R G      N   + + K L  N   +I  I +  K+SR+T Y
Sbjct  121  ILERSSAG-RIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIY  178

Query  191  RFLK  194
            R+L+
Sbjct  179  RYLN  182

423) OA238_c45100 in NC_020908


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 82/185 (45%), Positives = 125/185 (68%), Gaps = 7/185 (3%)

Query  1    MLIGYARVSTMDQNPALQMDALRNIGCERIFVEKASGSHRDRPQLKAALDYLREGDTLAV  60
            M IGYARVST  QN  LQ D L   GCE+IF +  SGS   RP L  A+++ R GDT+ V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLSRLARSLTQVIKTASDIAERGIALKVLTQNI--DTSTSEGRLFFHMTAAFDEFQREL  118
            W+L RL+R++ ++I   +++ ERG+++  L +NI  D S+S G+L+FH+ AAF EF+R+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVENTraglkaaakrgrrggrpkaMNEQNIKHAEAMLKDI-ENYPFIGDVIDQLKIGRTA  177
            I+E + AG  AA  RGR GGRP  +N +++    ++LK + +N   I  + +Q K++RT+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDL----TLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  178  FYKYF  182
            +Y+Y+
Sbjct  177  IYRYL  181

424) pinE in NC_014144


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  114 bits (414),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 80/179 (45%), Positives = 123/179 (69%), Gaps = 2/179 (1%)

Query  1    MLIGYARVSTVDQRLDLQRAALSAAGCERIFEDQAGGACANRPGLALALDVLREGDVLVV  60
            M IGYARVST  Q L+LQ   L++ GCE+IF+D+ +G+ ++RPGL  A++  R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVAQLVDFVERLQGRGVQFRSLTDAI--DTTTAAGRFFFHVMASLAQMEREL  118
            W+LDRLGR++ +L+ +V+ L+ RGV F+SL + I  D ++++G+++FH+ A++A+ ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IaertragleaarlrgrvggrrrSMTPAKIEAARKLLAAGTAPREVAASLGVSVPTLYR  177
            I ER+ AG  AAR RGR GGR   +    +   + L   GT+ + +A    VS  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

425) tnpR in NC_016932


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  114 bits (414),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 74/183 (41%), Positives = 120/183 (66%), Gaps = 4/183 (2%)

Query  4    IGYQRVSSVGQN---EQRQLDGIHVDEMFTDKASGKDANRPQLQAAIRYARKGDTFTVHS  60
            IGY RVS+  QN   ++ +L+    + +F D  SG  ++RP L+ AI +AR GDT+ V  
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  61   MDRLARNIIDLRTIVEELNGKGATVRFIKENLEFTGEDSPMSNLLLNMLGAVAEFERSMI  120
            +DRL+RN+ DL T+V+ELN +G + + + EN+   +  S+ ++LL+++++A AEFER++I
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  KERQAEGIAIAKAEGKYKGRKPSLSPEQIQQVRQLKAEGESISTIAKQFGVSRPSIYRAL  180
             ER + G   A+A G+Y GR   L+  ++  ++ L  +G +I TIA Q  VSR +IYR L
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  181  ERL  183
            ++L
Sbjct  182  NKL  184

426) Maqu_0235 in NC_008740


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  113 bits (411),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 84/186 (46%), Positives = 126/186 (68%), Gaps = 3/186 (1%)

Query  1    MIIGYARVSTQDQNPEFQVDALEKAGCEQIFQEKFTGKLRERPELSQCLRTLRKGDILVV  60
            M IGYARVST  QN ++Q D L+  GCE+IF++  +G    RP L + +   R GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLARSLKDLVEIVQDLNDREVGFKSLTEAI--DTTSSGGRLVFHIFGALAEFEHDL  118
            W+LDRL+R++ DL+ +V++LN+R V+F SL E I  D +SS G+L+FH+F+A+AEFE++L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTkagleaarargrkggrkPSMSDSDVRKAAAMLSDPQITKTEVAAHFGVTRTTLNA  178
            I ER+ AG  AARARGR GGR   ++  D+    ++  +    KT +A +  V+RTT+  
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTTIYR  179

Query  179  SLKRIG  184
             L+++ 
Sbjct  180  YLNKLN  185

427) B479_27034 in NC_019906


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  113 bits (411),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 81/184 (45%), Positives = 133/184 (73%), Gaps = 3/184 (1%)

Query  17   LRIGYARTSKQDQNLDLQRDALVAAGCTRIYEEQISGARANRPELEQMLKALRPGDTVVV  76
            ++IGYAR S   QNL+LQ D L + GC +I+++++SG++++RP L++ +   R+GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  77   WQLSRFGRSLSHllqlmaqleamqVRFESLTEHI--DTSTAGGRMQLNVFATLAEYEREL  134
            W+L R+GR++ +L+ L+ +L+   V F+SL E+I  D S++ G++ +++FA++AE+ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  135  NRERTMagleaarargrkggrKPTLGAKEIRDIKILLADPLTTVSDVAARFKVSRTTIYK  194
              ER+ AG  AARARGR GGR   L  +++  +K L  +  T +  +A + KVSRTTIY+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNG-TPIKTIAEQWKVSRTTIYR  179

Query  195  YLSK  198
            YL+K
Sbjct  180  YLNK  183

428) resR2 in NC_018000


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  113 bits (411),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 77/183 (43%), Positives = 112/183 (62%), Gaps = 3/183 (1%)

Query  5    LGYARVSTGDQDVAGQTMRLEQAGAIKVFTDIKSGKSMDRPGLAELLAYARVGDTLAVVR  64
            +GYARVSTG Q++  Q  RL+  G  K+F D  SG    RPGL   + +AR GDT+ V R
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSLAELLETVKMLRERQIDLLSLEEKI--DTSSAAGELIFHVFGAIAHFERRLIS  122
            LDRLGR++ +L+  V+ L ER + + SLEE+I  D SS++G+L+FH+F+A+A+FER LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTKDG-IaaarakgkrpgrrpLDMKKVDAAIKLIEAKTPPAEAAKQLSLGRSTVYREMR  181
            ER+  G IAA            L+ + +     L +  TP    A Q  ++R+T+YR + 
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  RLG  184
            +L 
Sbjct  183  KLN  185

429) res in NC_007105


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  113 bits (413),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 73/180 (41%), Positives = 121/180 (68%), Gaps = 4/180 (2%)

Query  1    MKFGYMRVSTLDQNLDRQKKQLEEFGCDRIFFEKITGTKRNRPELNSMLEFLRPEDTVVV  60
            MK+GY RVST  QNL+ Q  +L+  GC++IF + ++G+K +RP L+  +EF R+ DT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TDLTRLSRSTKDLIEITEQISQKGAHLKSLKES-WLDTTTAHGKMLFTIFAGIAQFERDL  119
              L RL+R+  DLI + ++++++G  + SL E+  +D +++ G++LF +FA++A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  TSERTKEGIEAARKRGKHPGRPKTDEEKVDYALY--LINQGMSRTDAAEKAGISRMTLYR  177
              ER+  G  AAR RG+  GRP   + + D +L   L ++G +    AE+  +SR T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKR-DLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

430) cgR_0159 in NC_009342


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  113 bits (413),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 124/186 (67%), Gaps = 6/186 (3%)

Query  4    IGYMRVSKSDGSQTTDLQRDALIAAGVDPGHLYEDRASGKQEDRPHLDACLKALRPGDTL  63
            IGY RVS   G Q  +LQ D L + G +   +++D+ SG +  RP LD  +   R+GDT+
Sbjct  3    IGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  64   LVWKLDRLGRNLWHLVNIVHDLTAREVGLKVLTGQGAAIDTTSAQGKLVFGIFAALAEFE  123
            +VW+LDRLGRN+ +L+ +V++L  R V++  L  +  ++D +S+ G+L+F +FAA+AEFE
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAEFE  117

Query  124  RELISERTKAGLESARARGRKGGRPFKMTPAKVRLAMAAMGQPETSVAALCKELGITRQT  183
            R+LI ER+ AG  +ARARGR GGRP K+    + L + ++ +  T++ ++  +  ++R T
Sbjct  118  RNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSRTT  176

Query  184  LYRHVS  189
            +YR ++
Sbjct  177  IYRYLN  182

431) Cp258_1641 in NC_017945


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  113 bits (413),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 74/183 (41%), Positives = 120/183 (66%), Gaps = 4/183 (2%)

Query  4    IGYQRVSSVGQN---EQRQLDGIHIDEMFTDKASGKDANRPQLQAAIRYARKGDTFTVHS  60
            IGY RVS+  QN   ++ +L+    + +F D  SG  ++RP L+ AI +AR GDT+ V  
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  61   MDRLARNIIDLRTIVEELNGKGATVRFIKENLEFTGEDSPMSNLLLNMLGAVAEFERSMI  120
            +DRL+RN+ DL T+V+ELN +G + + + EN+   +  S+ ++LL+++++A AEFER++I
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  KERQAEGIAIAKAEGKYKGRKPSLSPEQIQQVRQLKAEGESISTIAKQFGVSRPSIYRAL  180
             ER + G   A+A G+Y GR   L+  ++  ++ L  +G +I TIA Q  VSR +IYR L
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  181  ERL  183
            ++L
Sbjct  182  NKL  184

432) MmarC6_0014 in NC_009975


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  113 bits (412),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 85/184 (47%), Positives = 123/184 (67%), Gaps = 3/184 (1%)

Query  1    MIIGYARVSTKDQNLERQLDELKKAGSEKIFLEKISGTKRNRPEFDKMFEVLRSGDVIVV  60
            M IGYARVST  QNL+ Q D L+  G EKIF + +SG+K +RP +DK +E  RSGD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TELTRISRSTKDLVEIVETCKSLDVEIKSLKES-WLDTTSAHGKLLFTIFAGLAEFERDL  119
              L R++R+  DL+ +V+  +  +V + SL E+  +D +S+ G+LLF +FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  ISERVKSGLNAARSRGRLGGRP-KIDPEKVEMALKMYDSKEYTIKQILKATGISKFTLYN  178
            I ER  +G  AAR+RGR GGRP K++   + +   +YD+    IK I     +S+ T+Y 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YLEK  182
            YL+K
Sbjct  180  YLNK  183

433) Za10_1737 in NC_013355


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  113 bits (412),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 76/187 (41%), Positives = 130/187 (70%), Gaps = 6/187 (3%)

Query  1    MLIGYMRVSSADDRQSVDLQRDALIAAGVDERNLFFDKASGAKDDRPGLKKCLEYLKSGD  60
            M IGY RVS++   Q+++LQ D L + G +  ++F D  SG+K  RPGL K +E+ +SGD
Sbjct  1    MKIGYARVSTG--LQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   ELIVWKLDRLGRSLPHLLSIITDLKARDIAFHSLTEQ--MNTNTPHGELLFSLFGALAQY  118
             ++VW+LDRLGR++ +L++++ +L+ R+++FHSL E+  M+ +++ G+LLF LF+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERALTRERIMAGLEAArkrgrrggrLPTIDKEQLEQIKIALESGASKASVCRSFKIPRST  178
            ER L  ER  AG  AAR RGR GGR   ++K +L  +K   ++G++  ++    K++R+T
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LIDTLKR  185
            +   L++
Sbjct  177  IYRYLNK  183

434) Krad_4707 in NC_009660


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  113 bits (412),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 85/182 (47%), Positives = 132/182 (73%), Gaps = 3/182 (1%)

Query  11   IGYARVSTGdqdaalqqdalvaaGCAQVLTDMASGALTSRPQLEVALQGMGPGDTLVVWR  70
            IGYARVSTG Q+  LQ+D L + GC +++ D  SG+ + RP L+ A++   +GDT+VVWR
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  71   LDRLGRSLRHLLEVVDGLAARGVGFRSLTESI--DTTTATGRLVLHLFGALAEFERDLVR  128
            LDRLGR++ +L+ +V+ L  RGV+F+SL E+I  D +++TG+L++HLF+A+AEFER+L+ 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  129  ERTEaglaaarsrgrrggrPTVMTPAKIAAARAMLAGEAHSVRETAEALGVSRATLYRSL  188
            ER+ AG  AAR+RGR GGRP  +    ++  +++    + +++  AE   VSR+T+YR L
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRYL  181

Query  189  NN  190
            N+
Sbjct  182  NK  183

435) Noc_A0021 in NC_007483


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 98/182 (54%), Positives = 136/182 (75%), Gaps = 3/182 (1%)

Query  1    MKIGYARVSTLDQNLNLQRDALEAAGCQKVIVDQVSGTVAKRPGLEKVKEQLREGDTLVV  60
            MKIGYARVST  QNLNLQ D L++ GC+K++ D++SG+ +KRPGL+K  E  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WrldrlgrslrdlIEWVRYLDAQGVGLQSLHESI--DTTTPTGRLTFHLFGALAEFERNL  118
            WRLDRLGR++ DLI  V  L+ +GV+++SL+E+I  D +++TG+L FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IQERTQaglaaarargrlggrrKSLSPDKRALVVSLYEEKKLPVTKICEMMGISKPTLYS  178
            I ER+ AG  AARARGR GGR   L+    +L+ +LY++   P+  I E   +S+ T+Y 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YV  180
            Y+
Sbjct  180  YL  181

436) ECs4992 in NC_002695


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  112 bits (408),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 83/180 (47%), Positives = 130/180 (73%), Gaps = 2/180 (1%)

Query  1    MLIGYIRVSTNDQNTGLQRNALECAGCEQIFEDKMSGKTTQRPGLKRALKKLKPGDTLMV  60
            M IGY RVST  QN  LQ + L+  GCE+IF+D MSG  ++RPGL +A+   ++GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRHLVALTDELQQQGINFRSLTDNI--DTSTPMGRFFFHIMGALAEMEREL  118
            W+LDRLGR+M +L++L +EL+++G++F+SL +NI  D S++ G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVertraglaaarergrtggrprrlTQEQYEQVGRLLAGGVSRRQVALIFDIGLSTLYRY  178
            I+ER+ AG  AAR RGR GGRP +L + +   +  L   G + + +A    ++ +T+YRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

437) GLX_31570 in NC_016028


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 76/185 (42%), Positives = 122/185 (66%), Gaps = 6/185 (3%)

Query  6    IGYARCSTDKQDLAVQQQELLKLGVAADRIYTDKGFTGTNRERPGLDQALAAVRSGDTLV  65
            IGYAR ST+ Q+L +Q++ L   G   ++I+ D   +G++  RPGLD+A+   RSGDT+V
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHG--CEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  66   VPKLDRLARSVPDARAIGDSLTARGVKLQ-LGSSIH-DPSDPMGRLFFNILATFAEFEAD  123
            V +LDRL+R++ D  ++ + L  RGV ++ L  +I  D S + G+L+F+++A+FAEFE +
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  124  LIRMRTREGMAVARAKGKLRGKKPKLSDRQQKELRRMYDTGDYSISDLAEVFSISRPTVY  183
            LI  R+  G   ARA+G+  G+  KL+ R+   L+ +YD G  +I  +AE   +SR T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  184  RALSR  188
            R L++
Sbjct  179  RYLNK  183

438) SBI_04041 in NC_016582


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  111 bits (405),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 60/145 (42%), Positives = 106/145 (74%), Gaps = 1/145 (0%)

Query  6    NANRPELSAALDYARPGDTLCVWKLDRFARSLIDLVTMVDALRERGIGFKVLTGALANID  65
            +++RP L  A+++AR+GDT+ VW+LDR++R++ DL+T+V+ L ERG++F  L   ++ +D
Sbjct  39   KSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MD  97

Query  66   PGTADGRLMLQVVGAMAEFERSLIKERTRAGLDAAKAQGRTGGRPTVVDEDVITVARARK  125
             +++ G+L++++ +A AEFER+LI ER+ AG  AA+A+GR GGRP  ++   +T+ ++  
Sbjct  98   KSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY  157

Query  126  AKGESVSAIAKALGVSRATLYRHLG  150
             +G ++ +IA    VSR+T+YR L 
Sbjct  158  DNGTPIKTIAEQWKVSRTTIYRYLN  182

439) pinE in NC_012989


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  111 bits (405),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 69/171 (41%), Positives = 120/171 (71%), Gaps = 4/171 (2%)

Query  1    MDLQRDALKAAGCIRIFEEKESGRAGTKRPALEAALDFLRAEDQLVVWKIDRLGRSLREM  60
            ++LQ D L++ GC +IF++  SG + +KRP+L+ A++F R+ D +VVW++DRLGR++ ++
Sbjct  15   LNLQEDRLNTHGCEKIFNDHMSG-SKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDL  73

Query  61   LDTAHMLQERGVKLRSLTEQV--DTETATGRMMFNFLGTIAEYFLDLNRERTLAGLKAAV  118
            +   + L+ERGV ++SL E++  D  ++TG+++F++++++AE+  +L  ER+ AG  AA 
Sbjct  74   ITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAAR  133

Query  119  ARGRKGGRPRKITDADLEAGRAMLAAGTIPVAEIAKRLGVSRKTFYLYFPQ  169
            ARGR GGRP K+   DL   +++   GT P+  IA +  VSR T+Y Y+ +
Sbjct  134  ARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRYLNK  183

440) Mvol_0519 in NC_014222


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  111 bits (403),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 78/185 (43%), Positives = 120/185 (65%), Gaps = 5/185 (2%)

Query  1    MKIGYARVSTKEQNIEKYIEELKKVGCEKIYFEKISGGKSERPEFNKMMETIRENDIVVV  60
            MKIGYARVST  QN++   + L+  GCEKI+ + +SG+KS RP ++K +E  R  D +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   SDLTRLSRSMKDLITTMELFKSKGVQLKSLKESWI--DTTTAQGELMFNIFSALAEFERK  118
              L RL+R+M DLIT ++ ++ +GV + SL E+ I  D +++ G+L+F++F+A+AEFER+
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIKERTKNG-LDvarsrgrvggrprvKKDKLEMAIKLYNTGDCTLKEIKEITGVSKSTLY  177
            LI ER+  G +         G   +++K  L +   LY+ G   +K I E   VS++T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  178  RYLGK  182
            RYL K
Sbjct  179  RYLNK  183

441) Mvol_0520 in NC_014222


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  110 bits (399),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 78/185 (43%), Positives = 122/185 (66%), Gaps = 5/185 (2%)

Query  8    MIIGYARVSTKDQNLERQVQDLKKVGCEKIYLEKISGTIRNRPEFTKMFDRLSNEDIIIV  67
            M IGYARVST  QNL+ Q + L+  GCEKI+ + +SG+  +RP + K ++   + D I+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  68   TELTRISRSTKDLVEIVENCKSLNVEIKSLKES-WLDTSSAHGKLLFTIIAGLAQFERDL  126
              L R++R+  DL+ +V++ +   V + SL E+  +D SS+ G+LLF ++A++A+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  127  TSERTKNGLDVARSRGRVGGRPKVDLGKVEMAI--KLYNSGECTLKEIKEITGISKTTLY  184
              ER+  G   AR+RGR GGRP   L K ++++   LY++G   +K I E   +S+TT+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDNG-TPIKTIAEQWKVSRTTIY  178

Query  185  RYLGK  189
            RYL K
Sbjct  179  RYLNK  183

442) Shew_0991 in NC_009092


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  110 bits (402),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 84/188 (45%), Positives = 132/188 (71%), Gaps = 6/188 (3%)

Query  1    MKIGYVRVSKSDGSQVLDLQEDAMRALDIDPSNIYYDRLSGKKDSRPGLDACLKALREGD  60
            MKIGY RVS   G Q L+LQED + + + +  +I+ D++SG K  RPGLD  +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRNLTHLVNTVQGLNDRGVGLKVISGQGADIDTSTAAGKMIFGIFAALAE  120
            T+VVW+LDRLGRN+ +L+  V+ LN+RGV++  +  +   +D S+++G+++F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIRERTlaglsaarargkkggrrHQLTKSQVRLAQASMQHRDTNVSELCRELGVSR  180
            FER+LI ER+ AG  AARARG+ GGR ++L K ++ L + ++ + +T +  +  +  VSR
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRYVS  188
             T+YRY++
Sbjct  175  TTIYRYLN  182

443) Oant_4775 in NC_009670


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  110 bits (402),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 79/183 (44%), Positives = 121/183 (67%), Gaps = 3/183 (1%)

Query  5    LGYARVSTGDQDVAGQAMRLEQAGAIKVFSDVQSGKNMDRPGLAELLAYARAGDTLAVVR  64
            +GYARVSTG Q++  Q  RL+  G  K+F+D  SG +  RPGL   + +AR+GDT+ V R
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSLAELLETVKMLRERKIDLLSLEEKI--DTSSAAGELIFHVFGAIAHFERRLIS  122
            LDRLGR++ +L+  V+ L ER + + SLEE+I  D SS++G+L+FH+F+A+A+FER LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTkdgiaaarakgkkpgR-QPLDMKKVDAAMKLIAASISPAEAAKQLGLGRSTVYREMR  181
            ER+  G  AARA+G+  GR + L+ + +     L   + +    A Q  ++R+T+YR + 
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  RLG  184
            +L 
Sbjct  183  KLN  185

444) Oant_4668 in NC_009671


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  110 bits (402),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 79/183 (44%), Positives = 121/183 (67%), Gaps = 3/183 (1%)

Query  5    LGYARVSTGDQDVAGQAMRLEQAGAIKVFSDVQSGKNMDRPGLAELLAYARAGDTLAVVR  64
            +GYARVSTG Q++  Q  RL+  G  K+F+D  SG +  RPGL   + +AR+GDT+ V R
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSLAELLETVKMLRERKIDLLSLEEKI--DTSSAAGELIFHVFGAIAHFERRLIS  122
            LDRLGR++ +L+  V+ L ER + + SLEE+I  D SS++G+L+FH+F+A+A+FER LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTkdgiaaarakgkkpgR-QPLDMKKVDAAMKLIAASISPAEAAKQLGLGRSTVYREMR  181
            ER+  G  AARA+G+  GR + L+ + +     L   + +    A Q  ++R+T+YR + 
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  182  RLG  184
            +L 
Sbjct  183  KLN  185

445) Sulku_2622 in NC_014754


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  110 bits (401),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 126/188 (68%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKSDDSQVLDLQIDALLQAGVNQESIYTDKISGIKDERPGLENCLKALREED  60
            M IGYARVS +   Q L+LQ D L   G   E I+ D +SG K  RPGL++ +   R  D
Sbjct  1    MKIGYARVSTG--LQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   ILVVWKLDRLGRNLKHLINTIDDLNKRNIGFKVLSGQGVNIDTTTSAGKMMFSIFGAFAE  120
             +VVW+LDRLGRN+ +LI  +++LN R ++F  L  + + +D ++S+G+++F +F+AFAE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLE-ENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTIaglqaarargrkggrKFNLTKSQVRLAEASMKNRDTSVKELCAELGITR  180
            FER+LI ER+ AG  AARARGR GGR  +L K ++ L   ++ + +T++K +  +  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  PTLYKYIG  188
             T+Y+Y+ 
Sbjct  175  TTIYRYLN  182

446) Sulku_2718 in NC_014755


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  110 bits (401),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 126/188 (68%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKSDDSQVLDLQIDALLQAGVNQESIYTDKISGIKDERPGLENCLKALREED  60
            M IGYARVS +   Q L+LQ D L   G   E I+ D +SG K  RPGL++ +   R  D
Sbjct  1    MKIGYARVSTG--LQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   ILVVWKLDRLGRNLKHLINTIDDLNKRNIGFKVLSGQGVNIDTTTSAGKMMFSIFGAFAE  120
             +VVW+LDRLGRN+ +LI  +++LN R ++F  L  + + +D ++S+G+++F +F+AFAE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLE-ENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTIaglqaarargrkggrKFNLTKSQVRLAEASMKNRDTSVKELCAELGITR  180
            FER+LI ER+ AG  AARARGR GGR  +L K ++ L   ++ + +T++K +  +  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  PTLYKYIG  188
             T+Y+Y+ 
Sbjct  175  TTIYRYLN  182

447) YBT020_29181 in NC_017199


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  110 bits (401),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 77/184 (42%), Positives = 123/184 (67%), Gaps = 4/184 (2%)

Query  1    MIIGYARVSTLDQNLDRQIHSLTEYGCEKIVTEKFTGTIRDRKGLLQLFDVSRSGDTVVV  60
            M IGYARVST  QNL+ Q + L   GCEKI  +  +G+   R GL + ++ +RSGDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   ESISRLGRKTLDILTIIQQLEEKDIQFVSLKEQI--DTRTSTGKAMFQMMCVIAELERNL  118
              + RLGR+  D++T++++L+E+++ F SL E+I  D  +STG+ +F++   +AE+ERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IAERVKEGLEASKKRGKKLGRP-KIDKDKISLALRMYDSNEYSIKEIIEGTGISQGSLYR  177
            I ER   G  A++ RG+  GRP K++K  ++L   +YD+   +IK I E   +S+ ++YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  178  AIQK  181
             ++K
Sbjct  180  YLNK  183

448) Noc_0696 in NC_007484


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  110 bits (400),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 95/191 (50%), Positives = 138/191 (73%), Gaps = 3/191 (1%)

Query  1    MKIGYARASTLDQNPSLQRDALEAAGCEKMIVDQISGTVAKRPGLEKVKELLREEDTLVV  60
            MKIGYAR ST  QN +LQ D L++ GCEK++ D++SG+ +KRPGL+K  E+ R  DT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WrldrlgrslrdlIEQIRTLDAQRVGLQSLHESI--DTTTPTGRLTFHLFGALAEFERNL  118
            WRLDRLGR++ DLI  +  L+ + V+++SL+E+I  D +++TG+L FHLF+A+AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IQERTQaglaaarargrlggrrKSLNSDKRALVVSLYEEKKLPVTKICEMMGISKPTLYS  178
            I ER+ AG  AARARGR GGR   LN    +L+ +LY++   P+  I E   +S+ T+Y 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YVREAQEKTNR  189
            Y+   +++ N+
Sbjct  180  YLNKLNNQENK  190

449) PGA2_c09000 in NC_018286


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  110 bits (400),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 75/181 (42%), Positives = 125/181 (70%), Gaps = 4/181 (2%)

Query  3    LKIGYARVSTDTQTHDGQIAALKAAGCDKIFTEVASGARKDRPVLAQTLGYLRPHSDDVL  62
            +KIGYARVST+ Q  + Q   L++ GC+KIF +  SG++  RP L +++ +  ++S+D +
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEF--ARSGDTI  58

Query  63   TVYKLDRVGRSLPHLIQIMDRLETDGIGFHSVTEAI--DTSTPGGRLLFHLMGSLAAFER  120
             V +LDR+GR++ +LI +++ L+  G++FHS+ E I  D S++ G+LLFHL +++A FER
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  121  DLVVErtkaglaaakakgriggrprQMTNDKINAVRELLASGTTVKDAAAAVGVSVPTLY  180
            +L++ER+ AG  AA+A+GR GGRP ++ +  +  ++ L  +GT +K  A    VS  T+Y
Sbjct  119  NLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  181  R  181
            R
Sbjct  179  R  179

450) XFLM_12030 in NC_017561


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  110 bits (399),  Expect = 9e-26, Method: Compositional matrix adjust.
 Identities = 84/180 (47%), Positives = 130/180 (73%), Gaps = 4/180 (2%)

Query  11   LRLGYARVSTddqdmalqldalaKVQCDRVFSEKASSGKE-RPQLEECLRTLRRGDVLTV  69
            +++GYARVST+ Q++ LQ D L    C+++F++  S++K  RP L+  +   R GD + V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  70   WRLDRLGRSMTELVAIVNDLASRGVTFESLTEHI--DTSSASGKFAFHLFSALAEFERNT  127
            WRLDRLGR+M +L+++VN+L  RGV+F+SL E+I  D SS++G++ FHLF+A+AEFERN 
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  128  IKErtraglaaarargkmggrpaKVTPKAKREMKALYTSQEVSVKDICTRYNITRSTFYR  187
            I ER+ AG  AARARG+ GGRP K+  +    +K+LY  +  ++K I  + +++R+T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

451) Kvar_2125 in NC_013850


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  109 bits (397),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 86/181 (48%), Positives = 131/181 (73%), Gaps = 2/181 (1%)

Query  1    MLIGYARVSTGDQNLDLQKNALIRAECELVFEDTASGKNarrpglkralrrlraGDVLVV  60
            M IGYARVSTG QNL+LQ + L    CE +F+D  SG +++RPGL +A+   R+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSVRDLITLVSELQARGVNFRSLTDSI--DTSTPAGRFFFHVMSALAEMEREL  118
            W+LDRLGR++ DLITLV+EL+ RGV+F+SL ++I  D S+++G+++FH+ +A+AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTRAGLAAAreqgrvggrrrvmteevvercrrMLEKGATRQQVADVTGVGVKTIYKY  178
            I+ER+ AG  AAR +GR GGR   +    +   + + ++G+  + +A+   V+  TIY+Y
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  179  L  179
            L
Sbjct  181  L  181

452) Odosp_2993 in NC_015160


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  109 bits (398),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 66/144 (46%), Positives = 104/144 (73%), Gaps = 3/144 (2%)

Query  13   IGYARVSTRDQNLDMQLDVLQRQDCVQIFCEKISGVK-KRPELEHCLSLLREGDVLVVYK  71
            IGYARVST  QNL++Q D L+ ++C +IF + +SG K KRP L+  + + R GD +VV +
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  72   LDRLARSLSEIVRICSELESKNIRIRSVKDNI--DTTDYMGKFTMHIFAALAEFERNVIM  129
            LDRL+R++ +++ + +EL+ + + ++S+ +NI  D +   G++  H+FAA+AEFERN+I+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  130  ERTREGREAARKRGKKFGRPQGLN  153
            ER+  GR AAR RG+  GRP+ LN
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLN  146

453) Dd703_3045 in NC_012880


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  109 bits (398),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 79/179 (45%), Positives = 124/179 (70%), Gaps = 2/179 (1%)

Query  1    MLIGYVRVSTNDQNTDLQREALERLGCEQIFEEKISGTTEKKPKLNSALKALQAGDTLAV  60
            M IGY RVST  QN +LQ + L+  GCE+IF++ +SG+  K+P L+ A+   ++GDT+ V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSMRQLVKLMDTLQQRGIHFRSVTDSI--DTATPMGRFVFHIMGAMAEMEREL  118
            W+LDRLGR+M +L+ L++ L++RG+ F+S+ ++I  D +++ G+++FH+ +A AE ER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVErtraglaaarakgriggrrPKLTPEQWAQAGHLLANGVPRQQVALIYDVAVDTLYR  177
            I+ER+ AG  AARA+GR GGR  KL   + +    L  NG P + +A    V+  T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

454) Achl_0955 in NC_011886


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  109 bits (397),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 80/187 (43%), Positives = 122/187 (66%), Gaps = 6/187 (3%)

Query  7    IKIGYARVSTNDQDLTAQRNALLALGVDEKQIFVDHGLTGANRVRPGLREAMAACRAGDT  66
            +KIGYARVST  Q+L  Q + L + G +  +IF DH ++G++  RPGL  A+   R+GDT
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCE--KIFNDH-MSGSKSKRPGLDKAIEFARSGDT  57

Query  67   LVVTKLDRLARSLSDARDIADELTAKGVVL-SLGGS-THDPTDPVGRLLFNVLGMVAEFE  124
            +VV +LDRL+R++ D   + +EL  +GV + SL  + T D + + G+LLF++++  AEFE
Sbjct  58   IVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFE  117

Query  125  ADLIRMRTREGMAVAKAKGRLKGKPPKLSKAQRKHLLTLHDAGEHTQAELAELFSVSRTT  184
             +LI  R+  G   A+A+GR  G+P KL+K +   L TL D G   ++ +AE   VSRTT
Sbjct  118  RNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTT  176

Query  185  VYRELKR  191
            +YR L++
Sbjct  177  IYRYLNK  183

455) BTF1_19875 in NC_018508


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 77/181 (43%), Positives = 123/181 (68%), Gaps = 2/181 (1%)

Query  12   MIFGYARVSTKKQSLDMQLDELKRFGCEEIVTEKESGAKKDRVELQSLLGKLRKGGTLVV  71
            M +GYARVST  Q+L++Q D L+  GCE I  +  SG+K  R  L+  +   R G+T+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  72   YKLDRLGRTMHQLVNLLQEFNEKGIHFVSIKDGI--DTSTTMGRFLFHIFGAMAEMEREV  129
             +LDRLGR M++L+ L++E+NE+G+ F S+ + I  D S++ G++LFH+F+A AE ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  130  INERVISGVaaakargreggrkkaHTPQQIEGMLKMIEQGESKISVCEMFNVSRATLYRY  189
            I ER  +G  AA+ARGR GGR      +++  +  + ++G +  ++ E  +VSR+T+YRY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRY  180

Query  190  I  190
            +
Sbjct  181  L  181

456) Rpic12D_4479 in NC_012857


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  109 bits (397),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 79/189 (42%), Positives = 128/189 (68%), Gaps = 6/189 (3%)

Query  1    MLVGYMRVSSDSDRQSTNLQRDALLAVGVDARHLFEDHASGAKDDRAGLARALEFVRPGD  60
            M +GY RVS++   Q+ NLQ D L + G +   +F+DH SG+K  R+GL +A+EF R+GD
Sbjct  1    MKIGYARVSTGL--QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLSHLLAIVTSLKKKQVAFRSLTEN--LDTTTPSGEFLFQVFGALAQY  118
             +VVW+LDRLGR++ +L+++V  L+ + V+F+SL EN  +D ++++G++LF++F+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERALIQERVVaglaaarkrgriggrPQAITGEKLEAIVAALDGGMSKAAVCRNFGVKRTT  178
            ER LI ER  AG  AAR RGR GGRP+ +    L  + +  D G +  ++  +  V RTT
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LIETLARVG  187
            +   L ++ 
Sbjct  177  IYRYLNKLN  185

457) Rpic_1477 in NC_010682


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  109 bits (397),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 79/189 (42%), Positives = 128/189 (68%), Gaps = 6/189 (3%)

Query  1    MLVGYMRVSSDSDRQSTNLQRDALLAVGVDARHLFEDHASGAKDDRAGLARALEFVRPGD  60
            M +GY RVS++   Q+ NLQ D L + G +   +F+DH SG+K  R+GL +A+EF R+GD
Sbjct  1    MKIGYARVSTGL--QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLSHLLAIVTSLKKKQVAFRSLTEN--LDTTTPSGEFLFQVFGALAQY  118
             +VVW+LDRLGR++ +L+++V  L+ + V+F+SL EN  +D ++++G++LF++F+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERALIQERVVaglaaarkrgriggrPQAITGEKLEAIVAALDGGMSKAAVCRNFGVKRTT  178
            ER LI ER  AG  AAR RGR GGRP+ +    L  + +  D G +  ++  +  V RTT
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LIETLARVG  187
            +   L ++ 
Sbjct  177  IYRYLNKLN  185

458) Rpic_1852 in NC_010682


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  109 bits (397),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 79/189 (42%), Positives = 128/189 (68%), Gaps = 6/189 (3%)

Query  1    MLVGYMRVSSDSDRQSTNLQRDALLAVGVDARHLFEDHASGAKDDRAGLARALEFVRPGD  60
            M +GY RVS++   Q+ NLQ D L + G +   +F+DH SG+K  R+GL +A+EF R+GD
Sbjct  1    MKIGYARVSTGL--QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLSHLLAIVTSLKKKQVAFRSLTEN--LDTTTPSGEFLFQVFGALAQY  118
             +VVW+LDRLGR++ +L+++V  L+ + V+F+SL EN  +D ++++G++LF++F+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERALIQERVVaglaaarkrgriggrPQAITGEKLEAIVAALDGGMSKAAVCRNFGVKRTT  178
            ER LI ER  AG  AAR RGR GGRP+ +    L  + +  D G +  ++  +  V RTT
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LIETLARVG  187
            +   L ++ 
Sbjct  177  IYRYLNKLN  185

459) B479_26924 in NC_019906


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 77/187 (42%), Positives = 129/187 (69%), Gaps = 6/187 (3%)

Query  1    MLVGYMRVSSDSDRQSTDLQRDALLAAGVDPRHLFEDRASGAKDDRAGLARALEFVRAGD  60
            M +GY RVS++   Q+ +LQ D L + G +   +F+D+ SG+K  R+GL +A+EF R+GD
Sbjct  1    MKIGYARVSTGL--QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLSHLLAIVTSLKDKRVAFRSLTEN--LDTTTPSGEFLFQVFGALAQY  118
             +VVW+LDRLGR++ +L+++V  L+++ V+F+SL EN  +D ++++G++LF++F+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERALIQERVVaglaaarkrgriggrPQAITGEKLDAIVAALDGGMSKAAVCRNFNVKRTT  178
            ER LI ER  AG  AAR RGR GGRP+ +    L  + +  D G +  ++  + +V RTT
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LIETLTR  185
            +   L +
Sbjct  177  IYRYLNK  183

460) B479_27179 in NC_019906


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 77/187 (42%), Positives = 129/187 (69%), Gaps = 6/187 (3%)

Query  1    MLVGYMRVSSDSDRQSTDLQRDALLAAGVDPRHLFEDRASGAKDDRAGLARALEFVRAGD  60
            M +GY RVS++   Q+ +LQ D L + G +   +F+D+ SG+K  R+GL +A+EF R+GD
Sbjct  1    MKIGYARVSTGL--QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLSHLLAIVTSLKDKRVAFRSLTEN--LDTTTPSGEFLFQVFGALAQY  118
             +VVW+LDRLGR++ +L+++V  L+++ V+F+SL EN  +D ++++G++LF++F+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERALIQERVVaglaaarkrgriggrPQAITGEKLDAIVAALDGGMSKAAVCRNFNVKRTT  178
            ER LI ER  AG  AAR RGR GGRP+ +    L  + +  D G +  ++  + +V RTT
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LIETLTR  185
            +   L +
Sbjct  177  IYRYLNK  183

461) Pden_0095 in NC_008686


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (393),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 85/175 (49%), Positives = 125/175 (72%), Gaps = 6/175 (3%)

Query  1    MKVGYARVSTEDQKLDLQIAALRRAGCQKIFKDRGISGSSMERPGMKSMLRSLRPGQTLV  60
            MK+GYARVST  Q+L+LQ   L   GC+KIF+D+ +SGS   RPG+   +   R+G+T+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWrldrlgrslsglvllIEELGERGVEFQSLCE--SLDTASSGGRLVFHIMAALAEFERS  118
            VWRLDRLGR++ +L+ L++EL ERGV F+SL E  ++D +SS G+L+FH+ AA+AEFER+
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LISERTKAGMQEARDRGLRLGRPPSMTRDQVA--EAMRESGKLPIKEVAVRYNVS  171
            LI ER+ AG   AR RG   GRP  + + +++   ++ ++G  PIK +A + +VS
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVS  173

462) ambt_17020 in NC_015554


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 86/184 (47%), Positives = 132/184 (72%), Gaps = 3/184 (1%)

Query  1    MRIGYARVSSELQSENAQLDALANCGCERIYHEKISGKGTKRPELIRLLDSIRTGDTVIV  60
            M+IGYARVS+ LQ+ N Q D L   GCE+I+++ +SG  +KRP L + ++  R+GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   QrldrlgrslsdlINLLSAFKQKNVEFISLNENI--DTSSATGELIFHMIGAIAQFERRL  118
             RLDRLGR++ DLI L++ ++++ V F SL+ENI  D SS+TG+L+FH+++A+A+FER L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ISERTKVGLEAAkvrgrkggrkPKLTHSDVKKARAMLSSGEVSKAEVAQHFKVSRPTLNK  178
            I ER+  G  AA+ RGR GGR  KL   D+   +++  +G   K+ +A++ KVSR T+ +
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTTIYR  179

Query  179  ALEK  182
             L+K
Sbjct  180  YLNK  183

463) Arad_14069 in NC_011990


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 81/186 (44%), Positives = 123/186 (67%), Gaps = 6/186 (3%)

Query  5    IGYARISKADGSQVHDLQRDALTKAGIEATNVYEDSVSGKKDDRPGLAACMKALRSGDTL  64
            IGYAR+S   G Q  +LQ D L   G E  ++++D +SG K  RPGL   +   RSGDT+
Sbjct  3    IGYARVST--GLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  65   VVWKLDRLGRDLRHLVNLVDELTKRNIGLRVLAGEGAAIDTSTANGRLVFGIFAALAEFE  124
            VVW+LDRLGR++ +L+ LV+EL  R ++++ L  E  ++D S++ G+L+F +FAA+AEFE
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLE-ENITMDKSSSTGQLLFHLFAAFAEFE  117

Query  125  RALIIERTKaglaaarargrnggaPFKMTPAKLRLAQASMGKPETKVADLCSELGITRQT  184
            R LI+ER+ AG  AARARGR GG P K+    L L + ++    T +  +  +  ++R T
Sbjct  118  RNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSRTT  176

Query  185  LYRFVD  190
            +YR+++
Sbjct  177  IYRYLN  182

464) BYI23_E002780 in NC_016591


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (393),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 118/186 (64%), Gaps = 5/186 (2%)

Query  5    LGYARVSTGDQDVAGQTIRLEKAGAIKVFTDVMSGKSMDRPGLVELLAYARKGDTLAVVR  64
            +GYARVSTG Q++  Q  RL+  G  K+F D MSG    RPGL   + +AR GDT+ V R
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSLAELLATVEKLRAQGVALLSLEEKI--DTSSAAGELIFHVFGAIAHFERRLIS  122
            LDRLGR++ +L++ V+ L  +GV++ SLEE+I  D SS++G+L+FH+F+A+A+FER LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTkdgiaaarakgkrpgrQPLDMARVDAAI--KLVEARISPTEAARQLGIGRSTIYREM  180
            ER+  +   A     R G +P  + + D ++   L +   +    A Q  ++R+TIYR +
Sbjct  123  ERS-SAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  181  RRLGIE  186
             +L  +
Sbjct  182  NKLNNQ  187

465) GLX_31540 in NC_016028


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (393),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 118/186 (64%), Gaps = 5/186 (2%)

Query  5    LGYARVSTGDQDVAGQTIRLEKAGAIKVFTDVMSGKSMDRPGLVELLAYARKGDTLAVVR  64
            +GYARVSTG Q++  Q  RL+  G  K+F D MSG    RPGL   + +AR GDT+ V R
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  65   LDRLGRSLAELLATVEKLRAQGVALLSLEEKI--DTSSAAGELIFHVFGAIAHFERRLIS  122
            LDRLGR++ +L++ V+ L  +GV++ SLEE+I  D SS++G+L+FH+F+A+A+FER LI 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  123  ERTkdgiaaarakgkrpgrQPLDMARVDAAI--KLVEARISPTEAARQLGIGRSTIYREM  180
            ER+  +   A     R G +P  + + D ++   L +   +    A Q  ++R+TIYR +
Sbjct  123  ERS-SAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  181  RRLGIE  186
             +L  +
Sbjct  182  NKLNNQ  187

466) tnpR in NC_005244


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (393),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 77/187 (42%), Positives = 129/187 (69%), Gaps = 6/187 (3%)

Query  12   MLVGYMRVSSDSDRQSTDLQRDALLAAGVDPRHLFEDRASGAKDDRAGLARALEFVRAGD  71
            M +GY RVS++   Q+ +LQ D L + G +   +F+D+ SG+K  R+GL +A+EF R+GD
Sbjct  1    MKIGYARVSTGL--QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  72   VLVVWKLDRLGRSLSHLLAIVTSLKDKRVAFRSLTEN--LDTTTPSGEFLFQVFGALAQY  129
             +VVW+LDRLGR++ +L+++V  L+++ V+F+SL EN  +D ++++G++LF++F+A+A++
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  130  ERALIQERVVaglaaarkrgriggrPQAITGEKLDAIVAALDGGMSKAAVCRNFNVKRTT  189
            ER LI ER  AG  AAR RGR GGRP+ +    L  + +  D G +  ++  + +V RTT
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  190  LIETLTR  196
            +   L +
Sbjct  177  IYRYLNK  183

467) VAB18032_30359 in NC_015409


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (393),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 121/185 (66%), Gaps = 3/185 (1%)

Query  26   VGYGRVSTREQNLARQQAALTAAGCAKCFFDKASGKNADRPELTKVFEYIRPGDALTVVS  85
            +GY+RVST  QNL  Q+  L + GC K F D  SG ++ RP L K +E+ R+GD++ V  
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  86   LDRLGRSLEDLIGIVGRLKRHGVGFQSLHEK--LDTTTPGGMFVFHVFAALAEFIRTIIV  143
            LDRLGR++EDLI +V  L+ +GV+F+SL+E+  +D +++ G ++FH+FAA+AEF R +I+
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  144  ANTNEglaaaraagqrlgrppaMTPEKVAYALQLLSEPDRTMTSIAKLLGVSRSTLYTAL  203
              ++ G  AARA G+  GRP  +    ++  L+ L + +  + +IA    VSR+T+Y  L
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLT-LLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  204  PELQA  208
              L+ 
Sbjct  182  NKLNN  186

468) MEALZ_2136 in NC_016112


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (391),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 64/158 (41%), Positives = 101/158 (64%), Gaps = 3/158 (1%)

Query  8    LNKAGCHEIFKEKGSGSNSDRPELKKLLAYIRKGDTVTVTKLDRLARSTKDLLNIAEAIK  67
            LN  GC+ IF++  SGS+S RP L K + + R GDT+ V +LDRL+R+  DL+ + + ++
Sbjct  22   LNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELN  81

Query  68   KKGADFEVL--NINLDTKSPTGQLMLTMLAAIAEFERGIMLERQREGIDIAKADGKYKGR  125
             +G  F+ L  NI +D  S+TGQL++ ++AA+AEFER ++LER   G   A+A G+Y GR
Sbjct  82   ERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGR  141

Query  126  KP-INEAKLQQVQKLVDNGASVSKAVSEVGISRRTYYK  162
               +N   L  ++ L DNG+++     +  +SR T Y+
Sbjct  142  PEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

469) Mvol_1533 in NC_014222


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/183 (43%), Positives = 117/183 (64%), Gaps = 5/183 (2%)

Query  1    MIIGYARVSTKEQNIEKYIDELKRAGCEKIYFEKISGGKSERPEFNKMMETIRENDIVVV  60
            M IGYARVST  QN++   D L+  GCEKI+ + +SG+KS RP ++K +E  R  D +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   SDLTRLSRSMKDLINTMELFKSRGVQLKSLKEAWI--DTTTAQGELMFNIFSALAEFERK  118
              L RL+R+M DLI  ++ ++ RGV + SL E  I  D +++ G+L+F++F+A+AEFER+
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIKERTKNG-LEvarsrgrvggrprvDKNKLEMAIKLYNSGECTLKEIKEITGISKTTLY  177
            LI ER+  G +         G   +++K  L +   LY++G   +K I E   +S+TT+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNG-TPIKTIAEQWKVSRTTIY  178

Query  178  RYL  180
            RYL
Sbjct  179  RYL  181

470) Ppha_1052 in NC_011060


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  107 bits (390),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 64/146 (44%), Positives = 102/146 (70%), Gaps = 2/146 (1%)

Query  1    MLIGYARVSTKDQDTKAQIAALEFGGCEMIFQEKASGGRWDRPELHRLLEQLRKDDVVVV  60
            M IGYARVST  Q+ + Q   L+  GCE IF++  SG++  RP L++ +E  R +D +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLSRSLKDVLTFMEKINQAGAGFRSLTEVI--DTTSPGGRMMMQIVGTFAEFERAM  118
            W+LDRL+R++ D++T+++ +N+ G +F+SL E I  D +S+ G+++ ++ ++FAEFER +
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  LRERTRNGLDAARKQGRVGGRRPKLT  144
            + ER+  G  AAR +GR GGR  KL 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN  146

471) Slin_4835 in NC_013730


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  107 bits (390),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 80/185 (44%), Positives = 133/185 (72%), Gaps = 6/185 (3%)

Query  1    MKLGYARVSTqdqnlalqldalkaaGCSRIFQEKASGSKTERPELKRLLEIIREGDTLMI  60
            MK+GYARVST  QNL LQ D L++ GC +IF++  SGSK+ RP L + +E+ R GDT+++
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WKLDRLGRSLNHLIEIVTQLEEQHIGLVSLNDPI--DTTTAQGRLVFRIFASLAEFEREV  118
            W+LDRLGR++++LI +V +L+E+ +++ SL++ I  D +++ G+L+F++FA++AEFER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTlaglasarrrgqllgrrkglskAGEQKARIGESLYKEAKYSVEQIARELHISKTT  178
            I ER+ AG  +AR RG+  GR   L     +   +  +LY ++  ++  IA +  +S+TT
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKL---NKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTT  176

Query  179  LYKYL  183
            +Y+YL
Sbjct  177  IYRYL  181

472) pinR in NC_015576


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 80/181 (45%), Positives = 124/181 (69%), Gaps = 3/181 (1%)

Query  4    IGYARVSTIDQDPQLQLDALKEAGAARIFTDHGVSGSTAQRPELDACLDHLREGDVLTVW  63
            IGYARVST  Q+ +LQ D L+  G  +IF DH +SGS ++RP LD  ++  R GD + VW
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   KLDRLGRNTRHVLEVVEQLTSQGIGFRSLTEG--LHTDGPMGKAMLTIMAAFAQLERETM  121
            +LDRLGRN  +++ +V++L  +G++F+SL E   ++  ++ G+ ++ + AAFA++ER+ +
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  LERTraglaaaaangrkggrprkaTTADVAKARHLRGKGIAVDDIANVLKVSRATVYRYL  181
            LER+ AG  AA A GR GGRP K    D++  + L ++G ++  IA+  KVSR+T+YRYL
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  182  A  182
             
Sbjct  182  N  182

473) Sulku_2789 in NC_014756


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 83/188 (45%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGNQVLDLQIDALQGIGITYGQIYVDKASGAKDDRPGLDNCLKALREGD  60
            M IGYARVS   G Q L+LQ D L+  G    +I+ D  SG+K  RPGLD+ +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHG--CEKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRNLKHLVSTVDDLSRRNIGFKVLSGQGADIDTTTPAGKMVFGIFAALAE  120
            T+VVW+LDRLGRN+ +L++ V++L+ R ++F  L  +   +D ++++G+++F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIRERTIaglnaarargrkggrKFQLTKAQIRLAQAAMSNRDTSVSELCKEIGVTR  180
            FER+LI ER+ AG  AARARGR GGR  +L K ++ L + ++ + +T++  +  +  V+R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  ATLYRYVG  188
            +T+YRY+ 
Sbjct  175  TTIYRYLN  182

474) Sputw3181_4073 in NC_008750


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  107 bits (388),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 98/179 (55%), Positives = 134/179 (75%), Gaps = 4/179 (2%)

Query  4    RIGYARVSTDDQNLHLQRDALVAAGCEIIYEDKASGKSTARPELDNCLKALRPGDTLVVW  63
            +IGYARVST+ QNL+LQ D L + GCE I++D  SG  + RP LD+ +   R+GDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   rldrlgrslgdlVKVVTNLIDERGVGFLSLQEQI--ETNSASGKLIFHVFAALAEFERNL  121
            RLDRLGR++ DL+ +V +L +ERGV+F SL+E+I  + +S++G+L+FH+FAA+AEFERNL
Sbjct  62   RLDRLGRNMEDLITLVNEL-NERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  122  ISERTkagldaarargrkggrkpklapkDIREIKVLLKDPSIPVSDVAKRFGVSRTTIY  180
            I ER+ AG  AARARGR GGR  KL  +D+  +K L  D + P+  +A +  VSRTTIY
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIY  178

475) Psest_4383 in NC_019937


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  107 bits (388),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 74/182 (41%), Positives = 128/182 (71%), Gaps = 1/182 (0%)

Query  5    QIGYARVSTQGQDLDQQRSSLAQAGCQRIFEEKISGSKRDRPELGRVLDHLRAGDVLTVT  64
            +IGYARVST  Q+L+ Q   L   GC++IF++ +SGSK  RP L++ ++  R+GD + V 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  65   RLDRLARSTTDLLHIAEQLKERDAGLRSLAEPWA-DTTSPAGRMVLTIFAGIADFERSLI  123
            RLDRL+R+  DL+ + ++L+ER+ +++SL E  + D +S++G++++ +FA++A+FER+LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  124  SERTSagraaakargvrfgPKPALSLEQIAHARRLVEEGQSVSEVARLLCVHRATLYRAL  183
             ER+SAGR AA+ARG   G    L+  +++  + L ++G ++  +A    V R+T+YR L
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  184  SQ  185
            ++
Sbjct  182  NK  183

476) Neut_2538 in NC_008341


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 127/188 (68%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQHDALIAAGVDPSHLYEDQASGKREDRPGLANCLKALRSGD  60
            M IGY RVS   G Q  +LQ+D L + G +   +++D+ SG +  RPGL + +   RSGD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLLIWKLDRLGRDLRHLINTVHDLTTRGIGLKVLSGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+++W+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTKaglasarargrkggrPFKMTAAKLRLALAAMGQPETKVSDLCQELGITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L L ++ +  T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHLS  188
             T+YR L+
Sbjct  175  TTIYRYLN  182

477) YBT020_28454 in NC_017201


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 65/160 (41%), Positives = 106/160 (67%), Gaps = 7/160 (4%)

Query  1    MKYGYARVSTLNQDLESQIQMLQKEGCEEIYSEKFTGTKFDRPKFQELLSVVETGDTLVV  60
            MK GYARVST  Q+L+ Q + L+ +GCE I+++  +G+K  RP ++  +    +GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TKLDRFARSAENAIQTIRMLFEKGVKVHILNMGVVED--TPTGRLMFNIMSSFAEFERDM  118
             +LDR++R+ E+ I  +  L E+GV  H L+  +  D  ++TG+L+F++ ++FAEFER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVERTQEGKAIAKMNPDFKEGRPKKYNKKQIEHALDLLKT  158
            I+ER+  G+  A+    +  GRP K NK++    L LLKT
Sbjct  121  ILERSSAGRIAARARGRY-GGRPEKLNKRD----LTLLKT  155

478) Asphe3_41370 in NC_015146


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  106 bits (387),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 69/146 (48%), Positives = 108/146 (74%), Gaps = 8/146 (5%)

Query  3    QLGYTRVSTSSQDAQLQLDALVSAGVQKRDVFADVTSGSRTAIERPGMKRLLEYAEEGDT  62
            ++GY+RVST+ Q+ +LQ D L + G +K  +F D  SGS++   RPG+ + +E+A  GDT
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKS--KRPGLDKAIEFARSGDT  57

Query  63   VVVWRVDRLGRSLIDVLNTVNLLRERGVQVRSISDGI--DPATSTGRLMLNMLATLAEYE  120
            +VVWR+DRLGR++ D++  VN L ERGV  +S+ + I  D ++STG+L+++++A++AE+E
Sbjct  58   IVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFE  117

Query  121  RELIVERVNAGIAAARQNGTRF-GRP  145
            R+LI+ER +AG  AAR  G R+ GRP
Sbjct  118  RNLILERSSAGRIAARARG-RYGGRP  142

479) Sphch_4093 in NC_015595


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  106 bits (386),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 133/188 (71%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVEPGNIYDDRASGSRDDRPGLAACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E  +I++D+ SGS+  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLIVWKLDRLGRTLTHLVSTVQNLSDRGIGLRVLTGKGAQIDTTTPSGRMVFGIFATLAE  120
             ++VW+LDRLGR + +L++ V++L++RG++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDMIRERTMaglaaarargrkggrkfalSKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER++I ER+ AG  AARARGR GGR   L+K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

480) tnpR in NC_014006


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  106 bits (386),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 133/188 (71%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVEPGNIYDDRASGSRDDRPGLAACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E  +I++D+ SGS+  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLIVWKLDRLGRTLTHLVSTVQNLSDRGIGLRVLTGKGAQIDTTTPSGRMVFGIFATLAE  120
             ++VW+LDRLGR + +L++ V++L++RG++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDMIRERTMaglaaarargrkggrkfalSKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER++I ER+ AG  AARARGR GGR   L+K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

481) SLG_p_00470 in NC_015974


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  106 bits (386),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 133/188 (71%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVEPGNIYDDRASGSRDDRPGLAACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E  +I++D+ SGS+  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLIVWKLDRLGRTLTHLVSTVQNLSDRGIGLRVLTGKGAQIDTTTPSGRMVFGIFATLAE  120
             ++VW+LDRLGR + +L++ V++L++RG++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDMIRERTMaglaaarargrkggrkfalSKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER++I ER+ AG  AARARGR GGR   L+K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

482) Avi_9833 in NC_011986


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 82/186 (45%), Positives = 122/186 (66%), Gaps = 6/186 (3%)

Query  5    LGYARVSKSDGTQVHDLQRDALIAAGVDRDNIYEDSASGKKDDRPGLTSCLKALRAGDTL  64
            +GYARVS   G Q  +LQ D L + G ++  I++D  SG K  RPGL   +   R+GDT+
Sbjct  3    IGYARVST--GLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  65   LVWKLDRLGRDLRHLVNLVDELTKRNIGLKVLAGEGATIDTSTANGRLVFGIFAALAEFE  124
            +VW+LDRLGR++ +L+ LV+EL  R +++  L  E  T+D S++ G+L+F +FAA+AEFE
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLE-ENITMDKSSSTGQLLFHLFAAFAEFE  117

Query  125  RALIVERTKagleaarargrnggrPFKMTAAKLRLAQAAMGKPETKVGELCAELGVTRQT  184
            R LI+ER+ AG  AARARGR GGRP K+    L L + ++    T +  +  +  V+R T
Sbjct  118  RNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSRTT  176

Query  185  LYRFVG  190
            +YR++ 
Sbjct  177  IYRYLN  182

483) Alide_4456 in NC_014911


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  105 bits (383),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 74/175 (43%), Positives = 120/175 (69%), Gaps = 4/175 (2%)

Query  10   QSTNLQRDALLAVGVDARHLFEDHASGAKDDRAGLARALEFVRPGDVLVVWKLDRLGRSL  69
            Q+ NLQ D L + G +   +F+DH SG+K  R+GL +A+EF R+GD +VVW+LDRLGR++
Sbjct  13   QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNM  70

Query  70   SHLLAIVTSLKEKQVAFRSLTEN--LDTTTPSGEFLFQVFGALAQYERALIQERVVagla  127
             +L+++V  L+E+ V+F+SL EN  +D ++++G++LF++F+A+A++ER LI ER  AG  
Sbjct  71   EDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRI  130

Query  128  aarkrgriggrPQAITGEKLEAIVAALDGGMSKAAVCRNFGVKRTTLIETLARVG  182
            AAR RGR GGRP+ +    L  + +  D G +  ++  +  V RTT+   L ++ 
Sbjct  131  AARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLNKLN  185

484) YSA_03493 in NC_017986


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 80/188 (43%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALIAAGVDPAHLYEDQASGKREDRPGLAACLKALRSGD  60
            M IGY RVS   G Q  +LQ D L + G +   +++D+ SG +  RPGL   +   RSGD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINTVHDLTGRGVGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V++L  RGV++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTVaglasarargrkggrPFKMTAAKLRLAMASMGQPETKVSDLCEELGITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + E+  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHVS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

485) LAB52_07560 in NC_017470


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 62/154 (41%), Positives = 108/154 (71%), Gaps = 4/154 (2%)

Query  1    MKIGYARVSTIEQNLKPQIEQLKQAGAEKIYSEKYTGTTTERPVFDEVMKILKSGDTLIV  60
            MKIGYARVST  QNL+ Q ++L+  G EKI+++  +G+ + RP +D  + + +SGDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TKLDRLARNLGEALHVVDALFSRQVAIDVL--NLGRIDNTPSGKLIFNVFMSFAQFERDL  118
             +LDRL+RN+ + + +V+ L  R V+++ L  N+    ++++G+L+F++F +FA+FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IVTRTQEGKAYARKHDPSYRDGRPRKFTPEQLEL  152
            I+ R+  G+  AR ++  Y +GRP K+   +L L
Sbjct  121  ILERSSAGRIAARARGR-Y-GGRPEKLNKRDLTL  152

486) AAur_0420 in NC_008711


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (379),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 67/146 (46%), Positives = 110/146 (76%), Gaps = 8/146 (5%)

Query  3    MLGYTRVSTAAQDARLQLDSLLSAGVQRRDIFSDVTSGSRDAVKRPGMKKLLDYAEAGDT  62
             +GY+RVST+ Q+  LQ D L + G ++  IF+D  SGS+   KRPG+ K +++A +GDT
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKS--KRPGLDKAIEFARSGDT  57

Query  63   LVVWRVDRLGRSLIDVLNTVNLLQGWGVGLRSISDGI--DPATSTGRLMLNMLATLADYE  120
            +VVWR+DRLGR++ D++  VN L+ +GV+++S+ + I  D ++STG+L+++++A++A++E
Sbjct  58   IVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFE  117

Query  121  RELITERVNAGIAAAKANGTRF-GRP  145
            R+LI ER +AG  AA+A G R+ GRP
Sbjct  118  RNLILERSSAGRIAARARG-RYGGRP  142

487) ACMV_P4_00130 in NC_015188


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (379),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 82/189 (44%), Positives = 124/189 (66%), Gaps = 6/189 (3%)

Query  1    MLIGYMRVSTDNDRQVLDLQRDALLGAGVDERHLFEDRAGGSRRDRPGLAAALAYLKSDD  60
            M IGY RVST+   Q L+LQ D L   G +   +F+D+ +GS+  RPGL  A+ + +S+D
Sbjct  1    MKIGYARVSTGL--QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   CLVVWKLDRLGRSLPHLLETVNSLRTRGVGFRSLTEQ--MDTTTPQGEFLFHVFGALAQF  118
             +VVW+LDRLGR++ +L+  VN L  RGV+F+SL E+  MD +++ G++LFH+F+A+A+F
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF  116

Query  119  ERSLIQERVQaglaaarrrgrrggrPVAIDAEKLAAVITALDTGATKSSACRTFGISRST  178
            ER+LI ER  AG  AAR RGR GGRP  ++   L+ + T  D G+   +      +SR+T
Sbjct  117  ERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  179  LVDSLARIG  187
            +   L ++ 
Sbjct  177  IYRYLNKLN  185

488) MYO_4470 in NC_020287


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (379),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 132/188 (71%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKTDGSQHLDLQKDALLAAGVKEDRIYQDCGSGRNSQRPGLEAGLKALQPGN  60
            M IGY RVS   G Q+L+LQ D L + G   ++I++D  SG +S+RPGL+ ++   ++G+
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRNLKDLVMIVEGLRQREVGFKVLAGAGAEIDTSTANGRLFFAVFAALAE  120
            T+VVW+LDRLGRN+ DL+ +V+ L +R V+F  L      +D S++ G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLE-ENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  YEAELISErtraglqaarargrmggrprKMDRVMLQMLMEAMKNPEACAKAVAQKLNIST  180
            +E +LI ER+ AG  AARARGR GGRP K+++  L +L  ++ +  +  K++A++ ++S 
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  ATLYSYVN  188
            +T+Y Y+N
Sbjct  175  TTIYRYLN  182

489) slr7049 in NC_005230


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (379),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 132/188 (71%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKTDGSQHLDLQKDALLAAGVKEDRIYQDCGSGRNSQRPGLEAGLKALQPGN  60
            M IGY RVS   G Q+L+LQ D L + G   ++I++D  SG +S+RPGL+ ++   ++G+
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRNLKDLVMIVEGLRQREVGFKVLAGAGAEIDTSTANGRLFFAVFAALAE  120
            T+VVW+LDRLGRN+ DL+ +V+ L +R V+F  L      +D S++ G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLE-ENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  YEAELISErtraglqaarargrmggrprKMDRVMLQMLMEAMKNPEACAKAVAQKLNIST  180
            +E +LI ER+ AG  AARARGR GGRP K+++  L +L  ++ +  +  K++A++ ++S 
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  ATLYSYVN  188
            +T+Y Y+N
Sbjct  175  TTIYRYLN  182

490) GLX_31030 in NC_016021


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 131/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGIEPGNIYDDRASGSRDDRPGLAACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E  +I++D+ SGS+  RPGL   +   R GD
Sbjct  1    MKIGYARVST--GLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKDLSDRRIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V++L++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglaaarargrkggrkfalTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  AARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

491) GLX_31450 in NC_016028


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 131/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGIEPGNIYDDRASGSRDDRPGLAACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E  +I++D+ SGS+  RPGL   +   R GD
Sbjct  1    MKIGYARVST--GLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKDLSDRRIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V++L++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglaaarargrkggrkfalTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  AARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

492) tniR in NC_016591


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 126/188 (68%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALVAAGVDPAHLYEDQASGKREDRPGLASCLKALRPGD  60
            M IGY RVS   G Q  +LQ D L + G +   +++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTVaglasarargrkggrPFKMTAAKLRLAMAAMGQSETKVGDLCQELGITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ ++ T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHIS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

493) PST_0227 in NC_009434


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (379),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALVAAGVDPAHLYEDQASGKREDRPGLAACLKALRPGD  60
            M IGY RVS   G Q  +LQ D L + G +   +++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINAVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTIaglasarargrkggrPFKMTAAKLRLAMAAMGQPETKVSDLCQELDITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHIS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

494) PT7_0587 in NC_015458


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 126/188 (68%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALVAAGVDPAHLYEDQASGKREDRPGLASCLKALRPGD  60
            M IGY RVS   G Q  +LQ D L + G +   +++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTVaglasarargrkggrPFKMTAAKLRLAMAAMGQSETKVGDLCQELGITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ ++ T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHIS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

495) Pnap_4991 in NC_008762


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 94/179 (53%), Positives = 131/179 (74%), Gaps = 3/179 (1%)

Query  4    RIGYARVSTDDQNLDLQRDALTRSGCITIYEETASGKSATRIELAHCLKSLRSGDTLVVW  63
            +IGYARVST+ QNL+LQ D L   GC  I+++  SG  + R  L   +   RSGDT+VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   rldrlgrslsdlVKIIGDLEREGIPFESLSEKI--DTGSASGKLQFHVFAALAEFERNLI  121
            RLDRLGR++ DL+ ++ +L+  G++F+SL E+I  D +S++G+L FH+FAA+AEFERNLI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  RErtlagltaarargrvggrKPKLNEKQIREIKTLLTDPAAQVKDIAERYGVSRTTLYK  180
             ER+ AG  AARARGR GGR  KLN +++  +KTL  D ++ +K IAE+  VSRTT+Y+
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

496) BURPS668_2984 in NC_009074


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 65/149 (44%), Positives = 106/149 (72%), Gaps = 2/149 (1%)

Query  11   MRIGYARVSTQEQETRAQIDALTKAGVDAIHEEKRSGATLRRPVLDKLLRNLKRGDTLVV  70
            M+IGYARVST  Q+   Q D L   G + I ++  SG+  +RP LDK +   + GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  71   YKLDRIARSLKHLLSIIDRLQERGAGFESLTEHI--DTNSPAGRLMLQMLGAFAEFEREM  128
             +LDR++R++ +L+++++ L+ERG +F+SL E+I  D +S++G+L++++++AFAEFER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  129  IRERTKSGMQAAKRRGIRLGRPRSLESED  157
            I ER+ +G  AA+ RG   GRP  L+  D
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRD  149

497) tnpR in NC_013791


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 79/184 (43%), Positives = 126/184 (69%), Gaps = 4/184 (2%)

Query  1    MIIGYARVSTADQSLDLQMDALNKAGCERIYTEKASGGKDDRIELARVLDTLREGDTLVV  60
            M IGYARVST+ Q+L+LQ D LN  GCE+I+ +  SG+K  R  L + ++  R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRLARSTKKLIEVADLLDELGAELVSINDN--MDTKTPIGKAMFRMIGVIAELERDM  118
             +LDRL+R+   LI + + L+E G  + S+++N  MD  ++ G+ +F++++ +AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTKagleaarargrkggrP-KTDARKLDHAVRLYEAKSHSVREITELTGVSKGSLYR  177
            I ER+ AG  AARARGR GGRP K + R L     LY+ ++ +++ I+E   VS+ ++YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYD-NGTPIKTIAEQWKVSRTTIYR  179

Query  178  ELDR  181
             L++
Sbjct  180  YLNK  183

498) Alide_4638 in NC_014908


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 73/175 (42%), Positives = 119/175 (68%), Gaps = 4/175 (2%)

Query  10   QSTNLQRDALLAVGVDARHLFEDHASGAKDDRAGLARALEFVRPGDVLVVWKLDRLGRSL  69
            Q+ NLQ D L + G +   +F+DH SG+K  R+GL +A+EF R+GD +VVW+LDRLGR++
Sbjct  13   QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNM  70

Query  70   SHLLAIVTSLKKKQVAFRSLTEN--LDTTTPSGEFLFQVFGALAQYERALIQERVVagla  127
             +L+++V  L+ + V+F+SL EN  +D ++++G++LF++F+A+A++ER LI ER  AG  
Sbjct  71   EDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRI  130

Query  128  aarkrgriggrPQAITGEKLEAIVAALDGGMSKAAVCRNFGVKRTTLIETLARVG  182
            AAR RGR GGRP+ +    L  + +  D G +  ++  +  V RTT+   L ++ 
Sbjct  131  AARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLNKLN  185

499) PSPA7_5339 in NC_009656


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 73/175 (42%), Positives = 119/175 (68%), Gaps = 4/175 (2%)

Query  10   QSTNLQRDALLAVGVDARHLFEDHASGAKDDRAGLARALEFVRPGDVLVVWKLDRLGRSL  69
            Q+ NLQ D L + G +   +F+DH SG+K  R+GL +A+EF R+GD +VVW+LDRLGR++
Sbjct  13   QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNM  70

Query  70   SHLLAIVTSLKKKQVAFRSLTEN--LDTTTPSGEFLFQVFGALAQYERALIQERVVagla  127
             +L+++V  L+ + V+F+SL EN  +D ++++G++LF++F+A+A++ER LI ER  AG  
Sbjct  71   EDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRI  130

Query  128  aarkrgriggrPQAITGEKLEAIVAALDGGMSKAAVCRNFGVKRTTLIETLARVG  182
            AAR RGR GGRP+ +    L  + +  D G +  ++  +  V RTT+   L ++ 
Sbjct  131  AARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLNKLN  185

500) M892_28630 in NC_022271


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 124/186 (67%), Gaps = 11/186 (5%)

Query  1    MNLGYARVSTDDQNLDVQLSQLEKIGCEKIFQDKASGKSSEREALNKLIDFAREGDVVHV  60
            M++GYARVST+ QNL++Q  +L+  GCEKIF+D  SG  S R +L+K I+FAR GD + V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TKVDRIARNTIDALQIADQLANKGAGLVFHDLGD---LDINSDVGRVIYTTISAFAEMER  117
             ++DR++RN  D + + ++L ++G +  FH L +   +D +S  G++++  ++AFAE ER
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVS--FHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  118  KRILQRCNegreraraegrHLGRFPNKTLHSR----IQELAEQGMNKHAISKELGCSRTT  173
            + IL+R + GR  ARA GR  GR P+K L+ R    ++ L ++G    +I+ +   SRTT
Sbjct  119  NLILERSSAGRIAARARGRYGGR-PEK-LNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  174  VYKVLE  179
            +Y+ L+
Sbjct  177  IYRYLN  182

501) VIBHAR_p08245 in NC_009777


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 124/186 (67%), Gaps = 11/186 (5%)

Query  1    MNLGYARVSTDDQNLDVQLSQLEKIGCEKIFQDKASGKSSEREALNKLIDFAREGDVVHV  60
            M++GYARVST+ QNL++Q  +L+  GCEKIF+D  SG  S R +L+K I+FAR GD + V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TKVDRIARNTIDALQIADQLANKGAGLVFHDLGD---LDINSDVGRVIYTTISAFAEMER  117
             ++DR++RN  D + + ++L ++G +  FH L +   +D +S  G++++  ++AFAE ER
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVS--FHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  118  KRILQRCNegreraraegrHLGRFPNKTLHSR----IQELAEQGMNKHAISKELGCSRTT  173
            + IL+R + GR  ARA GR  GR P+K L+ R    ++ L ++G    +I+ +   SRTT
Sbjct  119  NLILERSSAGRIAARARGRYGGR-PEK-LNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTT  176

Query  174  VYKVLE  179
            +Y+ L+
Sbjct  177  IYRYLN  182

502) AB57_0286 in NC_011586


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (376),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

503) tnpR in NC_010410


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (376),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

504) ABTJ_02585 in NC_017847


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (376),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

505) ABTW07_3871 in NC_017387


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (376),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

506) M3Q_1516 in NC_018706


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (376),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

507) L483_16460 in NC_021491


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (376),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

508) Psyr_2668 in NC_007005


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (376),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

509) SeHA_C1568 in NC_011083


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (376),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

510) XCV2327 in NC_007508


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  104 bits (376),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

511) Pse7367_3725 in NC_019690


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (373),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 127/188 (68%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQLLDLQRDALLEAGIDSDRIYDDSASGRNDDRPGLTSCLKALREGD  60
            M IGY RVS   G Q L+LQ D L   G   ++I++D  SG +  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHG--CEKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRNLKHLVKLVEDFAKEGIGLRVLNGSGASIDTTRPEGKLAFTIFAALAE  120
            T+VVW+LDRLGRN+ +L+ LV+++   G++++ L+ +  ++D + + G+L F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIIERTNaglkaarargrkggrprkMTASKIRMAMAAMADKNTRPKDIADELGITT  180
            FER+LI+ER++AG  AARARGR GGRP K+    + + + ++ D+ T  K IA++  ++ 
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  TTLYEYVN  188
            TT+Y Y+N
Sbjct  175  TTIYRYLN  182

512) mlr6326 in NC_002678


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (372),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 61/147 (42%), Positives = 99/147 (68%), Gaps = 3/147 (2%)

Query  3    RIGYARTSTTDQNLAAQIVALKAAGCEVIREEQKSGSTLEGRPQLNTILDFIHAGETLVV  62
            +IGYAR ST  QNL  Q   L++ GCE I +++ SGS    RP L+  ++F ++G+T+VV
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSK-SKRPGLDKAIEFARSGDTIVV  60

Query  63   TRIDRLARSLRDLQMIVDKLKTKGAHLSATEQPV--DTSTAPGKAFFDMLGVFAEFETNL  120
             R+DRL+R++ DL  +V+ L+ +G  + + E+ +  D S++ G+ +F++++ FAEFE NL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  RRERQAEGIAAAKKRGTYKGRPPKIDR  147
              ER + G  AA+ RG Y GRP K+++
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNK  147

513) AciPR4_0123 in NC_014963


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (373),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 75/182 (42%), Positives = 109/182 (60%), Gaps = 4/182 (2%)

Query  16   IGYVRVSSAEQN---EARQLEGLGLDRTFTDKLSGKDMNRPQLSAALEYLRDGDTLFVHS  72
            IGY RVS++ QN   +  +L+  G ++ F D +SG   +RP L  A+E+ R GDT+ V  
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  73   MDRLARNLDDLRKIVLGLTERGVHVSFVKEGLLFTGEDSPMSNLLLSVMGAFAEFERSLI  132
            +DRL+RN++DL  +V  L ERGV    + E +   +  S+ ++LL+ + +AFAEFER+LI
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  133  RERQREGIAAAKKAGVYKGRRPKLNEAMVIDLKRRAANGEKRAMLAREFKISRETLYTYL  192
             ER   G  AA+  G Y GR  KLN   +  LK    NG     +A + K+SR T+Y YL
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  193  EK  194
            +K
Sbjct  182  NK  183

514) SJA_P2-00270 in NC_014005


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (375),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 63/146 (44%), Positives = 102/146 (70%), Gaps = 6/146 (4%)

Query  1    MRVGYARVSTSDQNPELQLDALRRAGCERVFTEKASGARDDRPELARILEDVLRAGDTLV  60
            M++GYARVST+ QN +LQ D L   GCE++F +  SG++  RP L + +E   R+GDT+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIE-FARSGDTIV  59

Query  61   VWKLDRLARSLKKLIATAEDLEREKIGLVSLTESI--DTTTPGGMLTFHVFGAIAQFERA  118
            VW+LDRL+R++  LI+  ++L+   +++ SL E+I  D +++ G L FH+F+A+A+FER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  119  LIRE-GSVAKIVKLEHAWRRLDGRND  143
            LI E +S ++I    +A+ R +GR +
Sbjct  120  LILERSSAGRIA--ARARGRYGGRPE  143

515) NH44784_017531 in NC_021285


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (375),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 81/191 (43%), Positives = 127/191 (67%), Gaps = 3/191 (1%)

Query  3    KIGYARVSTEDQNLALQLDALRHEGCTRIYQEKMTGKAGDRPKlaaalaalGEGDQLVVW  62
            KIGYARVST  QNL LQ D L  +GC +I+++ M+G  + RP L  A+     GD +VVW
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KLDRLGRSLKHLIDTVQELEARRIGFRSISDGI--DTETPGGRLLFHVIGAIAEFEVRQI  120
            +LDRLGR++ +LI  V+EL+ R ++F+S+ + I  D  ++ G+LLFH+++A+AEFE   I
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  SERTkagllaarrrgkrlgrPPVLNPDLIAEAQRLFQSGELSRAAIAERLQVGRTTLWRA  180
             ER+ AG +AAR RG+  GRP  LN   ++  + L+++G   + +IAE+ +V+RTT+ R 
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIK-TIAEQWKVSRTTIYRY  180

Query  181  TRDMRSDASTS  191
               + ++ +  
Sbjct  181  LNKLNNQENKD  191

516) pEFER_0031 in NC_011743


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (375),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

517) SSPP111 in NC_007351


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (374),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 83/185 (45%), Positives = 124/185 (68%), Gaps = 8/185 (4%)

Query  3    KIGYARVSTQDQSLDGQIDTLKDYGCERIFSEKVSGRKTKRTELDKCLDYLREGDILVIY  62
            KIGYARVST  Q+L+ Q D L+  GCE+IF++ +SG K+KR  LDK +++ R GD +V+ 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KLDRLGRTTKQLIDLSQWLDENGIDLHIIDMNVS--TKDAMGKMFFTMMSAFAELEANLL  120
            +LDRLGR   +LI L + L+E G+ +H ++ N++     + G+++F + +AFAE+E NL+
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  SERTkkgleaarargrkggrPSLPDYKKRE---IKFLYDEQKLTGEEIAKQTDVSRSTVY  177
             ER+  G  AARARGR GGRP     +KR+   +K LYD+       IA Q  VSR+T+Y
Sbjct  122  LERSSAGRIAARARGRYGGRPE--KLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  178  RIIKN  182
            R +++
Sbjct  179  RYLNK  183

518) Alide_4496 in NC_014911


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (375),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALIAAGVDPVHLYEDQASGMREDRPGLTSCLKALRTGD  60
            M IGY RVS   G Q  +LQ D L + G + +  ++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEKI--FNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTIaglasarargrkggrPFKMTAAKLRLAMAAMGQPETKVGDLCQELGVTR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  V+R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHVS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

519) Dsui_2500 in NC_016616


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (375),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALIAAGVDPVHLYEDQASGMREDRPGLTSCLKALRTGD  60
            M IGY RVS   G Q  +LQ D L + G + +  ++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEKI--FNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTIaglasarargrkggrPFKMTAAKLRLAMAAMGQPETKVGDLCQELGVTR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  V+R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHVS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

520) ECL_A229 in NC_014107


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (375),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALIAAGVDPVHLYEDQASGMREDRPGLTSCLKALRTGD  60
            M IGY RVS   G Q  +LQ D L + G + +  ++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEKI--FNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTIaglasarargrkggrPFKMTAAKLRLAMAAMGQPETKVGDLCQELGVTR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  V+R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHVS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

521) ECL_03827 in NC_014121


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (375),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALIAAGVDPVHLYEDQASGMREDRPGLTSCLKALRTGD  60
            M IGY RVS   G Q  +LQ D L + G + +  ++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEKI--FNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTIaglasarargrkggrPFKMTAAKLRLAMAAMGQPETKVGDLCQELGVTR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  V+R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHVS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

522) Tint_3212 in NC_014154


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (374),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALIAAAIDPAHLYEDQASGKREDRPGLASCLKALRSGD  60
            M IGY RVS   G Q  +LQ D L + + +   +++D+ SG +  RPGL   +   RSGD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINTVHDLTGRGVGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V++L  RGV++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTVaglasarargrkggrPFKMTAAKLRLAMAAMGQTETNVGDLCQELGITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHIS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

523) lwe0782 in NC_008555


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  103 bits (374),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 77/192 (41%), Positives = 125/192 (66%), Gaps = 5/192 (2%)

Query  1    MIIGYARISTQHQKFDSQINSLQKFGCDTIFTECTSGRKTDRPElkkalkklkaGDTFVI  60
            M IGYAR+ST  Q+++ Q + L+  GC+ IF +  SG K+ RP L KA+   ++GDT+V+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRLSRGTKHLLQLMEEFNEKNVNFISIQNNI--DTSTSMGKFFFTIMSAFAEMEADL  118
             +LDRL+R   +L+ L++E+NE+ V+F S+++NI  D S+S G+++F + +AFAE E +L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERVLSGLDTAKENGVKLGRPQK--QIDIKKIVTLYTTDNRTVTDIAKLMNLSRPTIYK  176
            I ER  +G  +A+  G   GRP+K  + D+  + TLY  +   +  IA   ++SR TIY+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  177  HLKEQKILQIKD  188
             L+  +  + KD
Sbjct  180  YLNKLNNQENKD  191

524) Bcep1808_7230 in NC_009227


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 126/188 (68%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALIANGVDPAHLYEDQASGKREDRPGLVSCLKALRPGD  60
            M IGY RVS   G Q  +LQ D L ++G +   +++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINTVHDMTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V+++  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTIaglasarargrkggrPFKMTAAKLRLAMAAMGQPETKVGDLCQELGITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHIS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

525) ECL_01720 in NC_014121


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  102 bits (370),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 95/140 (68%), Gaps = 2/140 (1%)

Query  2    ANRPALKKLLKTLKEGDTLVVWKLDRLGRSMRNLVLLVDELRQRGIHFKSLTDSI--DTS  59
            ++RP+L K +   + GDT+VVW+LDRLGR+M +L+ LV+EL +RG+ F SL ++I  D S
Sbjct  40   SKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKS  99

Query  60   SPMGRFIFHIMSALAEMERELIVERTRAGLAAAREKGRIGGRRPKLTPEQWAQAGRLIAN  119
            S+ G+++FH+ +A+AE ER+LI+ER+ AG  AAR +GR GGR  KL   + +    L  N
Sbjct  100  SSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN  159

Query  120  GVDRKQVAIIYDVAVCTLYK  139
            G   K +A    V+  T+Y+
Sbjct  160  GTPIKTIAEQWKVSRTTIYR  179

526) AM1_H0028 in NC_009933


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  102 bits (370),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 128/188 (69%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKVDGSQVLDLQMDALLEAGVPENRIYKDRVSGKTARRPGLKACLKALQPGN  60
            M IGYARVS   G Q L+LQ D L   G   ++I++D++SG  ++RPGL   +   ++G+
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLKHLVDVVGELRQREVGFKVLAGAGAEIDTTTANGRLFFAVFAALAE  120
            T+VVW+LDRLGR++ +L+ +V EL +R V+F  L      +D +++ G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLE-ENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  YERELIAErtraglkaarargrmggrprKMDVATLQMAMSAMSDPRACAKEIAQKLGMTT  180
            +ER+LI ER+ AG  AARARGR GGRP K++   L + + ++ D  +  K IA++  ++ 
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  ATLYTYVN  188
            +T+Y Y+N
Sbjct  175  TTIYRYLN  182

527) A225_R1p0410 in NC_018107


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 77/190 (41%), Positives = 128/190 (68%), Gaps = 6/190 (3%)

Query  3    IGYIRMSKADGSQTNDLQRDALIAAGVDAAHFYEDRASGKREERPGLTACLKALRPGDTL  62
            IGY R+S   G Q  +LQ D L + G +   +++D+ SG +  RPGL   +   R+GDT+
Sbjct  3    IGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  63   VVWKLDRLGRDLRHLINTVHDLTARGTGLKVLTGHGATIDTTTAAGKLVFGIFAALAEFE  122
            VVW+LDRLGR++ +LI  V++L  RG ++  L  +  T+D ++++G+L+F +FAA+AEFE
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAEFE  117

Query  123  RELIAERTTaglasarargrnggrPYKMTPVKLRLAMASMGQSETKVSTLCQELGITRQT  182
            R+LI ER++AG  +ARARGR GGRP K+    L L + ++ ++ T + T+ ++  ++R T
Sbjct  118  RNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSRTT  176

Query  183  LYRHISPVGQ  192
            +YR ++ + +
Sbjct  177  IYRYLNKLNN  186

528) TM1040_1645 in NC_008044


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  102 bits (370),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 71/176 (41%), Positives = 113/176 (65%), Gaps = 8/176 (4%)

Query  12   KIGYARVSTADQNPDMQIHELKRYGVPEELIFVDRASGGTMKRPQFMRALRYAQYEGTEL  71
            KIGYARVST+ QN ++Q + L+  G   E IF D+ SG+  KRP + +A+ +A+  G  +
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFAR-SGDTI  58

Query  72   VVWKLDRLGRTLGGVLDTLKLLSDRGVTFVSLTERI--DTTGPMGKAMIHLLAVFAELER  129
            VVW+LDRLGR + +++  ++ L++RGV+F SL E I  D +++ G+ ++HL+A FAE+ER
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  130  DLIVERTKAGIERAKERGDVGGRPKAMTPERVAKAEEMLAAGERGNTV---WKAMK  182
            +LI+ER+ AG   A+ RG  GGRP  +    ++    +   G   +T+   WK  +
Sbjct  119  NLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSR  174

529) Mycsm_06107 in NC_019966


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  101 bits (366),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 80/181 (45%), Positives = 121/181 (67%), Gaps = 3/181 (1%)

Query  4    IGYARVSTTDQNPQLQLDALEQAGATRIFTDHGASGSTASRPHLDACLDHLREGDVLTVW  63
            IGYARVST  QN +LQ D L+  G  +IF DH  SGS + RP LD  ++  R GD + VW
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDH-MSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   KLDRLGRNTQHVLAVVEQLTSRGIGFRSLTEG--LHTEGPMGTAMLTIMAAFAQLERDTM  121
            +LDRLGRN ++++++V++L  RG++F+SL E   ++  ++ G  ++ + AAFA++ER+ +
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  IErtraglaaaaangrkggrprKVddadaaKARQLREKGIAAADIAKMLGVSRATVYRYL  181
            +ER+ AG  AA A GR GGRP K++  D +  + L ++G +   IA    VSR+T+YRYL
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYL  181

Query  182  A  182
             
Sbjct  182  N  182

530) XNC1_p0130 in NC_014170


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  101 bits (365),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 130/188 (70%), Gaps = 6/188 (3%)

Query  1    MRIGYTRVSKSDGSQVqdlqldallaaGVNKENIYQDEISGKSDKRPGLDACLKALRSGD  60
            M+IGY+RVS   G Q  +LQ D L + G +K  I++D++SG   KRPGLD  +   RSGD
Sbjct  1    MKIGYARVST--GLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLMVWKLDRLGRSLKHLVNTIHDLADRKIGFKVLTGQGAEIDTTTASGKLVFGIFAALAE  120
             ++VW+LDRLGR++ +L+  +++L +R ++F  L  +   +D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELISERTKaglaaarargreggrSFKLTKSQVRLAQASMKSRDCSVSELCEELGISR  180
            FER+LI ER+ AG  AARARGR GGR+ KL K ++ L + ++   + ++  + E+  +SR
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  QALYKYVG  188
             ++Y+Y+ 
Sbjct  175  TTIYRYLN  182

531) tniR in NC_012961


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 128/188 (69%), Gaps = 6/188 (3%)

Query  1    MRIGYTRVSKSDGSQVqdlqldallaaGVNKENIYQDEISEKSDKRPGLDACLKALRPGD  60
            M+IGY+RVS   G Q  +LQ D L + G +K  I++D++S    KRPGLD  +   R+GD
Sbjct  1    MKIGYARVST--GLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLMVWKLDRLGRSLKHLVNTIHDLADRKIGFKVLTGQGAEIDTTTASGKLVFGIFAALAE  120
             ++VW+LDRLGR++ +L+  +++L +R ++F  L  +   +D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELISERTKVglaaarargreggrSFKLTKSQVRLAQVSMKSRGCSVSELCEELGISR  180
            FER+LI ER+  G  AARARGR GGR+ KL K ++ L + ++   G ++  + E+  +SR
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  QALYKYVG  188
             ++Y+Y+ 
Sbjct  175  TTIYRYLN  182

532) tniR in NC_009350


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  101 bits (365),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 123/188 (66%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALISAGLDPSHLYEDQASGKREDRPGLAACLKALREGD  60
            M IGY RVS   G Q  +LQ D L + G     +++D+ SG +  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHG--CEKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTIaglasarargrkggrPFKMTAAKLRLAMAAMGQPETKVGDLCQELGITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHVS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

533) Ppro_3694 in NC_008607


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  100 bits (364),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 123/188 (66%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQTTDLQHDALIAASVTANHIYEDKASGKLDARPGLDAALKALREGD  60
            M IGY RVS   G Q  +LQ+D L   +   + I++D  SG    RPGLD A+   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRL--NTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVVWKLDRLGRDLRHLVNTVHDLAKRGVGFKVLSGHGASIDTTTPAGKLVFGIFAALAE  120
            T+VVW+LDRLGR++ +L+  V++L  RGV+F  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELISErtraglasarargrtggaPYKMTAAKLRLAMAAMGQSETKVGDLCNELGITR  180
            FER+LI ER+ AG  +ARARGR GG P K+    L L + ++ ++ T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHVA  188
             T+YR + 
Sbjct  175  TTIYRYLN  182

534) GYY_02460 in NC_015847


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  100 bits (362),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 78/183 (43%), Positives = 114/183 (63%), Gaps = 3/183 (1%)

Query  1    MIIGYARVSTKDQKLERQIDELRKAGCEKIFLEKISGTKKNRPEFDRMFGVLRSGDIILV  60
            M IGYARVST  Q+L+ Q D L   GCEKIF + +SG+K +RP +D+ +   RSGD I+V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   TELTRISRSTKDLIEIMTRLEEMGVSVKCLKES-WLDTSSAHGKLLFTIFAGLAEFERDL  119
              L R++R+  DLI ++  L+E GVS   L E+  +D SS+ G+LLF +FA++AEFER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  ISERVKSG-LkaarsrgrkggrpkaDEKAVELALKMYDSKEYEVKQILKATGISKFTLYK  178
            I ER  +G + A       G   K + + + L   +YD+    +K I     +S+ T+Y+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YLN  181
            YLN
Sbjct  180  YLN  182

535) Tmz1t_2111 in NC_011662


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  100 bits (362),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 71/173 (42%), Positives = 118/173 (69%), Gaps = 4/173 (2%)

Query  10   QSTDLQRDALLAAGVDPRHLFEDYASGAKDDRAGLVQALEFVRPGDVLVVWKLDRLGRSL  69
            Q+ +LQ D L + G +   +F+D  SG+K  R+GL +A+EF R+GD +VVW+LDRLGR++
Sbjct  13   QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNM  70

Query  70   SHLLTIVTSLKDKRVAFRSLTEN--LDTTTPSGEFLFQVFGALAQYERALIQERVVagla  127
             +L+T+V  L+++ V+F+SL EN  +D ++++G++LF++F+A+A++ER LI ER  AG  
Sbjct  71   EDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRI  130

Query  128  aarkrgriggrPQAITGEKLDAIIAALEGGMSKAAVCRNFGVKRTTLIETLTR  180
            AAR RGR GGRP+ +    L  + +  + G +  ++  +  V RTT+   L +
Sbjct  131  AARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLNK  183

536) Tint_3239 in NC_014154


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  100 bits (362),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 71/173 (42%), Positives = 118/173 (69%), Gaps = 4/173 (2%)

Query  10   QSTDLQRDALLAAGVDPRHLFEDYASGAKDDRAGLVQALEFVRPGDVLVVWKLDRLGRSL  69
            Q+ +LQ D L + G +   +F+D  SG+K  R+GL +A+EF R+GD +VVW+LDRLGR++
Sbjct  13   QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNM  70

Query  70   SHLLTIVTSLKDKRVAFRSLTEN--LDTTTPSGEFLFQVFGALAQYERALIQERVVagla  127
             +L+T+V  L+++ V+F+SL EN  +D ++++G++LF++F+A+A++ER LI ER  AG  
Sbjct  71   EDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRI  130

Query  128  aarkrgriggrPQAITGEKLDAIIAALEGGMSKAAVCRNFGVKRTTLIETLTR  180
            AAR RGR GGRP+ +    L  + +  + G +  ++  +  V RTT+   L +
Sbjct  131  AARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLNK  183

537) Tint_3259 in NC_014155


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  100 bits (362),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 71/173 (42%), Positives = 118/173 (69%), Gaps = 4/173 (2%)

Query  10   QSTDLQRDALLAAGVDPRHLFEDYASGAKDDRAGLVQALEFVRPGDVLVVWKLDRLGRSL  69
            Q+ +LQ D L + G +   +F+D  SG+K  R+GL +A+EF R+GD +VVW+LDRLGR++
Sbjct  13   QNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNM  70

Query  70   SHLLTIVTSLKDKRVAFRSLTEN--LDTTTPSGEFLFQVFGALAQYERALIQERVVagla  127
             +L+T+V  L+++ V+F+SL EN  +D ++++G++LF++F+A+A++ER LI ER  AG  
Sbjct  71   EDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRI  130

Query  128  aarkrgriggrPQAITGEKLDAIIAALEGGMSKAAVCRNFGVKRTTLIETLTR  180
            AAR RGR GGRP+ +    L  + +  + G +  ++  +  V RTT+   L +
Sbjct  131  AARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLNK  183

538) tniR in NC_007973


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  100 bits (361),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALIAAGVDPAHLYEDQASGKREDRPGLLSCLKALRPGD  60
            M IGY RVS   G Q  +LQ D L + G +   +++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLMVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T++VW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELITERTIaglasarargrkggrPFKMTAAKLRLAMAAMGQPETKVGDLCQELGITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHIS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

539) tniR in NC_007974


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  100 bits (361),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALIAAGVDPAHLYEDQASGKREDRPGLLSCLKALRPGD  60
            M IGY RVS   G Q  +LQ D L + G +   +++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLMVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T++VW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELITERTIaglasarargrkggrPFKMTAAKLRLAMAAMGQPETKVGDLCQELGITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHIS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

540) tniR in NC_007974


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  100 bits (361),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQATDLQRDALIAAGVDPAHLYEDQASGKREDRPGLLSCLKALRPGD  60
            M IGY RVS   G Q  +LQ D L + G +   +++D+ SG +  RPGL   +   R+GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLMVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAE  120
            T++VW+LDRLGR++ +LI  V++L  RG+++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELITERTIaglasarargrkggrPFKMTAAKLRLAMAAMGQPETKVGDLCQELGITR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + ++  ++R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHIS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

541) KPN_pKPN5p08178 in NC_009651


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =  100 bits (362),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 129/188 (69%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRLGLTACLKSLRDGD  60
            M IGYARVS   G Q+L+LQ+D L + G E+  I++D  SG++  R GL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE  120
             +VVW+LDRLGR++ +L+  V+EL++R ++++ L  + + +D ++++G+++F +FA++AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAE  115

Query  121  FERDLIRERTMaglasarargrkggrKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER  180
            FER+LI ER+ AG  +ARARGR GGR   L K ++ L + ++ + +T++  +  +  + R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVG  188
             T+YRY+ 
Sbjct  175  TTIYRYLN  182

542) A284_12147 in NC_020266


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 99.4 bits (358),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 81/182 (45%), Positives = 120/182 (66%), Gaps = 4/182 (2%)

Query  3    KIGYARVSTQDQSLDGQIDTLEEYGCERIFSEKASGRKTKRTELDKCLDYLREGDILVIY  62
            KIGYARVST  Q+L+ Q D L+  GCE+IF++  SG K+KR  LDK +++ R GD +V+ 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KLDRLGRTTKQLIELSQWFDENSIDLHIIDMNVS--TKDAMGKMFFTMMSAFAELEANLL  120
            +LDRLGR   +LI L + ++E ++ +H ++ N++     + G+++F + +AFAE+E NL+
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  SERTkkgleaarargrkggrPS-LPDHKKREIKFLYDEQKLTGEEIAKQTGVSRSTVYRM  179
             ER+  G  AARARGR GGRP  L  +    +K LYD+       IA Q  VSR+T+YR 
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYRY  180

Query  180  LK  181
            L+
Sbjct  181  LN  182

543) Haur_5190 in NC_009973


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 99.1 bits (357),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 90/192 (47%), Positives = 135/192 (71%), Gaps = 3/192 (1%)

Query  1    MQLGYARVSTddqhlhlqhdalqqaGCEQIFADHGSGATADRSGFRSLLAYARAGDIVVV  60
            M++GYARVST+ Q+L+LQ+D L+  GCE+IF DH SG+ + R+G+   + +AR+GD +VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   WrldrlsrslkdlIEIVTLLDTKGIGLKSLHESI--DTTSSAGKLIFHIFGALAEFERTL  118
            WRLDRL+R++ DLI +V  L+ +G+++ SL+E+I  D +SS+G+L+FH+F+A+AEFER L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IRERTHaglqaarargrkggrPKALSADQQALAVKLYNEKQHTIAQICRMLGISKPTLYN  178
            I ER+ AG  AARARGR GGRP  L+  + +L   LY ++   I  I     +S+ T+Y 
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLY-DNGTPIKTIAEQWKVSRTTIYR  179

Query  179  YLADASAAGTTN  190
            YL   +     +
Sbjct  180  YLNKLNNQENKD  191

544) Terro_3079 in NC_018014


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score =   99 bits (360),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 74/181 (41%), Positives = 107/181 (60%), Gaps = 8/181 (4%)

Query  46   VGYIRVST----LDQREDRQLEGVTVDRRFVDRVSGKDVKRPQLTAMLSFVREGDTVVCH  101
            +GY RVST    L+ +EDR L+    ++ F D++SG   KRP L   + F R GDT+V  
Sbjct  3    IGYARVSTGLQNLNLQEDR-LNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  102  SMDRLGRNLDDLRKLVFGLTERGVRVEFRK-ENLIFIGEDSPMANLLLSVMGAIAEFERQ  160
             +DRLGRN++DL  LV  L ERG  V F+  E+ I ++  S+ ++LL+ + +A+AEFER+
Sbjct  62   RLDRLGRNMEDLITLVNELNERG--VSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  161  LIRERQREGIELAKKRGVYKGRPRTLSAEVVVSLVQRFEAGEKPSVLAREFGVSRMTLHR  220
            LI ER   G   A+ RG Y GRP  L+   +  L   ++ G     +A +  VSR T+ R
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  221  Y  221
            Y
Sbjct  180  Y  180

545) CVAR_1346 in NC_015859


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 72/144 (50%), Positives = 108/144 (75%), Gaps = 3/144 (2%)

Query  16   SHRPELDRLWDRLRHGDTVVVWRLDRLGRSVPHLIDQLEDLQARGVGFVSLQETI--DTT  73
            S RP LD+  +  R GDT+VVWRLDRLGR++ +LI  +++L+ RGV+F SL+E I  D +
Sbjct  40   SKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKS  99

Query  74   TPGGRLVFHVFSALAQFERDLVIERTSaglaaarargrvggrPKKLTEQQTATARSLYES  133
            ++ G+L+FH+F+A+A+FER+L++ER+SAG  AARARGR GGRP KL  ++ +  ++LY++
Sbjct  100  SSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN  159

Query  134  KTMTVAEIGRVLGVSRSTIYRGLE  157
             T  +  I+    VSR+TIYR L+
Sbjct  160  GT-PIKTIAEQWKVSRTTIYRYLN  182

546) Celgi_2802 in NC_015671


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 118/186 (64%), Gaps = 5/186 (2%)

Query  1    MELGYARVSTAKQDLDRQVEALVAAGVARDKIFLDKKSGATTDRPGLRAVLEYAREGDVI  60
            M +GYARVST+ Q+L+ Q + L + G   +KIF D  SG+ + RPGL   +E+AR GD I
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  61   VVNTLDRLGRTVRDTLNLIHDLTDRGVGVRNLADPIKVDSANPSDPMGQlavvllalFAQ  120
            VV  LDRLGR + D + L+++L +RGV+ ++L + I +D ++++   GQL   L+A FA+
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSST---GQLLFHLFAAFAE  115

Query  121  MERTYtveraaharavataKGRRIGRPVLVDADKLAYAAHLREAGHSIAEIVAKTGIART  180
             ER   +ER++ +R  A A+GR  GRP  ++   L+    L + G +I  I  +  ++RT
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRT  175

Query  181  SLYRHL  186
            ++YR L
Sbjct  176  TIYRYL  181

547) pin in NC_016624


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 97.8 bits (352),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 78/179 (44%), Positives = 118/179 (66%), Gaps = 5/179 (2%)

Query  4    MLGYARVSTGDQDVAGQRLRLEQAGALKVFTDVCSGKAKDRPGLEALLAHARRGDTLAIV  63
             +GYARVSTG Q++  Q  RL+  G  K+F D  SG    RPGL+  +  AR GDT+ + 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  64   RLDRLGRSLAELLATVAMLKERGIGLLSLEERI--DTTSAAGELVFHVFGAIAHFEQRLI  121
            RLDRLGR++ +L++ V  L+ERG+++ SLEE I  D +S++G+L+FH+F+A+A+FE+ LI
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  AERTKDgiaparargkrpgrepVDMDKIKAAL--KLVEAGLSPTEAAKQLGLGRSTVYR  178
             ER+  G  +ARARG+  GR    ++K   +L   L + G +    A Q  ++R+T+YR
Sbjct  122  LERSSAGRIAARARGRYGGRPE-KLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

548) Tmz1t_2347 in NC_011667


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 97.8 bits (352),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 122/188 (65%), Gaps = 6/188 (3%)

Query  1    MLIGYMRVSKADGSQSTDLQRDALIGAGVSPSHLYEDLASGRRDDRPGLSACLKALREGD  60
            M IGY RVS   G Q+ +LQ D L   G     +++D  SG +  RPGL   +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLIVWKLDRLGRDLRHLINTVHDLTARSVGLKVLTGHGAAVDTTTAAGKLVFGIFAALAE  120
            T++VW+LDRLGR++ +LI  V++L  R+V++  L  +  ++D ++++G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEEN-ITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELISERTMaglasarargrnggrPFKMTAAKLRLAMAAMGQPETVVGDLCEELGVTR  180
            FER+LI ER+ AG  +ARARGR GGRP K+    L L + ++ +  T +  + E+  V+R
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSR  174

Query  181  QTLYRHVS  188
             T+YR ++
Sbjct  175  TTIYRYLN  182

549) pnf2460 in NC_006363


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 97.5 bits (351),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 115/182 (64%), Gaps = 4/182 (2%)

Query  1    MRVGYIRVSTVDQN---TDRQLDGIDVERVFTDKVTGKNAKRPALQEMLAFVRDGDTVLV  57
            M++GY RVST  QN    + +L+  + E++F D ++G ++KRP+L+  + F R GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  58   HSMdrlarnlddlrrlvrqlTGKGVRVEFVKEALTFTGEDSPMATLMLSVMGAFAEFERA  117
              +DRL+RN++DL  LV +L  +GV  + + E +T  +  S+ + L++ + +AFAEFER 
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAEFERN  119

Query  118  LILERQREGIATAKARGAYKGRKPALTADQVTALRERAAAGEPKSALAREFGVSRETVYA  177
            LILER   G  +A+ARG Y GR   L   ++T L+     G P  ++A +  VSR T+Y 
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  178  YL  179
            YL
Sbjct  180  YL  181

550) BCQ_PI072 in NC_011973


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 97.3 bits (350),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 75/183 (41%), Positives = 131/183 (72%), Gaps = 4/183 (2%)

Query  2    LKFGYARVSTqdqslslqldALNHYEVEQIFEEKESGKRKNRPQLDELLKVLRKGDTVVV  61
            +K+GYARVST  Q+L+LQ D LN    E+IF++  SG + +RP LD  +   R GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  62   YKLDRISRSTKHLIELMEQFEAKGIHFVSIQDKI--DTTTAMGRFFFRMLASIAELERDI  119
             +LDR++R+  +LI L+++++ +G+ F S++++I  D +++ G+++F+++A++AE+ER++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  ISERTKDGLVaarargrnggrP-KVEPKKIMLAMKMYESKDYSLSQIKEATGIGATTLYR  178
            I ER+  G +AARARGR GGRP K++ + + L   +Y++ + ++  I E   ++ TT+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTIYR  179

Query  179  YLG  181
            YL 
Sbjct  180  YLN  182

551) AARI_30520 in NC_014550


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 97.0 bits (349),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 79/191 (42%), Positives = 124/191 (65%), Gaps = 15/191 (7%)

Query  1    MGYTRVSTlsqdaalqldalvasGVQKRDVFADVTSGSRSAIERPGMKKLLDYAEAGDTV  60
            +GY+RVST  Q+  LQ D L + G +K  +F D  SGS+S   RPG+ K +++A +GDT+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKS--KRPGLDKAIEFARSGDTI  58

Query  61   VVWRVDRLGRSLIDVLNTVNLLRERGINVRSISDGI--DPATSTGRMMLNMLASLAEYER  118
            VVWR+DRLGR++ D++  VN L ERG++ +S+ + I  D ++STG+++++++A++AE+ER
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  119  ELIVERVNAGIAAARQSGTRF-GRPASDPAVIADKLAIAKDARARGRTAEDAARLVGW--  175
            +LI+ER +AG  AAR  G R+ GRP     +    L++ K     G      A    W  
Sbjct  119  NLILERSSAGRIAARARG-RYGGRPEK---LNKRDLTLLKTLYDNGTPIKTIA--EQWKV  172

Query  176  SRATFYRHLGQ  186
            SR+T+YR L +
Sbjct  173  SRTTIYRYLNK  183

552) Deipe_4426 in NC_019790


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 96.5 bits (347),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 62/145 (43%), Positives = 103/145 (72%), Gaps = 4/145 (2%)

Query  6    IGYARVStddqttdlqldALKGAGVLKVYQETASGGRWDRPELHRMLEFLREGDIVVVWK  65
            IGYARVST+ Q  +LQ D L+  G  K++++  SG++  RP L++ +EF R GD +VVW+
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  66   VDRLSRSLADLVRIMEMIKARGARLKSLTEPI--DTSTPAGEAMMQLIGVFAQLERANLR  123
            +DRL+R++ DL+ +++ ++ RG  + SL E I  D S+++G+ + +L++ FA++ER  + 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  124  ERTHAGIKAARAKGVKF-GRPSKLS  147
            ER+ AG  AARA+G ++ GRP KL+
Sbjct  123  ERSSAGRIAARARG-RYGGRPEKLN  146

553) JCM7686_pAMI1p052 in NC_022042


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 96.5 bits (347),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQRDALIASGVEEDQIYSDLASGKKDDRSGLEACLKALREGD  60
            M IGYARVS   G Q+L+LQ D L + G E  +I++D  SG K  R+GL+  +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLIVWKLDRLGRSLHHLVKTVSMLSERGVGLKVLTGQGAQIDTTTAAGRLSFGIFAALAE  120
             ++VW+LDRLGR++++L+  V+ L+ERGV++  L  +   +D ++++G+L F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FESELIRERTMaglqaarargrkggrKFALTKAQVRMAQAAMASRDTSVSELCKELGVKP  180
            FE +LI ER+ AG  AARARGR GGR   L K ++ + + ++   +T++  +  +  V  
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVD  188
             T+YRY++
Sbjct  175  TTIYRYLN  182

554) JCM7686_pAMI8p166 in NC_022050


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 96.5 bits (347),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQRDALIASGVEEDQIYSDLASGKKDDRSGLEACLKALREGD  60
            M IGYARVS   G Q+L+LQ D L + G E  +I++D  SG K  R+GL+  +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLIVWKLDRLGRSLHHLVKTVSMLSERGVGLKVLTGQGAQIDTTTAAGRLSFGIFAALAE  120
             ++VW+LDRLGR++++L+  V+ L+ERGV++  L  +   +D ++++G+L F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FESELIRERTMaglqaarargrkggrKFALTKAQVRMAQAAMASRDTSVSELCKELGVKP  180
            FE +LI ER+ AG  AARARGR GGR   L K ++ + + ++   +T++  +  +  V  
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVD  188
             T+YRY++
Sbjct  175  TTIYRYLN  182

555) JCM7686_pAMI8p184 in NC_022050


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 96.5 bits (347),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 125/188 (67%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQRDALIASGVEEDQIYSDLASGKKDDRSGLEACLKALREGD  60
            M IGYARVS   G Q+L+LQ D L + G E  +I++D  SG K  R+GL+  +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLIVWKLDRLGRSLHHLVKTVSMLSERGVGLKVLTGQGAQIDTTTAAGRLSFGIFAALAE  120
             ++VW+LDRLGR++++L+  V+ L+ERGV++  L  +   +D ++++G+L F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FESELIRERTMaglqaarargrkggrKFALTKAQVRMAQAAMASRDTSVSELCKELGVKP  180
            FE +LI ER+ AG  AARARGR GGR   L K ++ + + ++   +T++  +  +  V  
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVD  188
             T+YRY++
Sbjct  175  TTIYRYLN  182

556) AMBLS11_01125 in NC_018692


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 87/182 (48%), Positives = 128/182 (71%), Gaps = 3/182 (1%)

Query  1    MKIGYARVSSELQSEDAQLDALANSGCERIYHEKISGKGVNRPELTRLLDSLRTGDTVIV  60
            MKIGYARVS+ LQ+ + Q D L   GCE+I+++ +SG   +RP L + ++  R+GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   QrldrlgrslsdlIHLLSAFKKKNVEFISLNENI--DTSSATGELIFHMIGAIAQFERRL  118
             RLDRLGR++ DLI L++ ++ + V F SL+ENI  D SS+TG+L+FH+++A+A+FER L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ISERTKVGLDaarargrkggrkpkLTPSDVKKARAMLKSRDVTKTEVAEHFKVSRPTLNK  178
            I ER+  G  AARARGR GGR  KL   D+   +++  +    KT +AE+ KVSR T+ +
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTTIYR  179

Query  179  AL  180
             L
Sbjct  180  YL  181

557) XNC1_1750 in NC_014228


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 124/188 (66%), Gaps = 6/188 (3%)

Query  1    MLVGYVRVSKNDGSQTLAPQRDVLITAGVEPNRIYEDLASGRKDDRPGLNACLKALQPGN  60
            M +GY RVS   G Q L  Q D L T G E  +I++D  SG K  RPGL+  +   ++G+
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTHGCE--KIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   TLVIWKLDRLGRDLKHLVTTVDDLRARDVGLKVLAGAGAQIDTTTSNGRLFFGIFAALAE  120
            T+V+W+LDRLGR++ +L+T V++L  R+V++  L      +D ++S G+L+F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLE-ENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FERELIAERTQaglaaarargrlggrPRKMDRATImmamaamaDPKANAIEVARRLNITT  180
            FER+LI ER+ AG  AARARGR GGRP K+++  +   + ++ D  +    +A + +++ 
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDL-TLLKTLYDNGTPIKTIAEQWKVSR  174

Query  181  TTLYAYVN  188
            TT+Y Y+N
Sbjct  175  TTIYRYLN  182

558) Dshi_3683 in NC_009955


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 95.7 bits (344),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 80/188 (43%), Positives = 123/188 (66%), Gaps = 6/188 (3%)

Query  1    MLIGYARVSKADGSQSLDLQRDALVGARVEAEQIYSDLASGKKDDRPGLQACLKALRDGD  60
            M IGYARVS   G Q+L+LQ D L       E+I++D  SG K  RPGL+  +   R GD
Sbjct  1    MKIGYARVS--TGLQNLNLQEDRLNTH--GCEKIFNDHMSGSKSKRPGLDKAIEFARSGD  56

Query  61   VLVVWKLDRLGRSLHHLVKTVSMLSERGVGLKVLTGQGAQIDTTTAAGRLSFGIFAALAE  120
             +VVW+LDRLGR++++L+  V+ L+ERGV++  L  +   +D ++++G+L F +FAA+AE
Sbjct  57   TIVVWRLDRLGRNMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAE  115

Query  121  FESELIRERTMaglqaarargrkggrKFALTKAQVRMAQAAMASRDTSVSELCKELGVKP  180
            FE +LI ER+ AG  AARARGR GGR   L K ++ + + ++   +T++  +  +  V  
Sbjct  116  FERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLK-TLYDNGTPIKTIAEQWKVSR  174

Query  181  VTLYRYVD  188
             T+YRY++
Sbjct  175  TTIYRYLN  182

559) pinR in NC_010612


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 95.4 bits (343),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 130/191 (69%), Gaps = 6/191 (3%)

Query  11   LGYARVSTGHQSLDQQLDALSAEGVATERIYQDKLSGMSTRDQRPGLAALLDYARPGDTI  70
            +GYARVSTG Q+L+ Q D L+++G   E+I++D +SG  ++ +RPGL   +++AR+GDTI
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSG--SKSKRPGLDKAIEFARSGDTI  58

Query  71   TVVGIDRLGRNAAEVMTTIRDLSQRGIVLRSLREGI--DTSNATGRMVAGVlaslaelel  128
             V  +DRLGRN  +++T + +L++RG+ ++SL E I  D S++TG+++  ++A++AE+E 
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  129  elgrerrsaarearrsrgQSIGRPKALDESKAALARRMHAAGEPVSTIGSALGVSRATVY  188
            +L  ER SA+R A R+RG+  GRP  L+    +L + +   G P+ TI+    VSR+T+Y
Sbjct  119  NLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  189  RVLAETEGEAA  199
            R L   + +  
Sbjct  179  RYLNKLNNQEN  189

560) D11S_2299 in NC_013438


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 72/179 (41%), Positives = 110/179 (62%), Gaps = 3/179 (1%)

Query  4    IGFARVSTVGQSYEEQVKQLKKAGCFKIFVGKNSGEKSKNRARLDELLAFVREGDTIVIT  63
            IG+ARVST  Q+ + Q  +L+  GC KIF +  SG KSK R+ LD  + F R GDTIV+ 
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSK-RPGLDKAIEFARSGDTIVVW  61

Query  64   KLDRLGRSASQLLNLYEDLESRGVSLKSLDGMIDTEKRNDPFDKIKCVFMAQLAEMERNL  123
            +LDRLGR+  +L+ L ++L+ RGVS+ SL+  I  +K +   + +  +F A +AE ERNL
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLF-AAFAEFERNL  120

Query  124  IRERTMEGRLAKGEAGK-GGRPKSLDQNARKAFEKDIKKGLSLEDLSKKYSFSKSTAYR  181
            I ER+  GR+A    G+ GGRP  L++     +     +G ++  ++ +   S++T YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

561) OBV_34630 in NC_016048


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 94.1 bits (338),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 58/141 (42%), Positives = 93/141 (66%), Gaps = 2/141 (1%)

Query  1    MKIGYVRVSTAEQNTARQEVLMKELGVEHLYVDRTSGKNTDRPELKKMMTYARQGDTVIV  60
            MKIGY RVST+ QN   QE  ++  G E ++ D+ SG ++ RP L K + +AR GDT++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   ESISRFARNTRDLLDLVEQLTAKHVEFVSRKEAI--DTTTPSGKFMLTVFGAVAELEREY  118
              + R++RN  DL+ LV++L  + V F S  E I  D ++++G++++ +F+A AE+ER+ 
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  ILQRQREGIEIAKCQGKYTGR  139
            IL+R   G   A+ +G+Y GR
Sbjct  121  ILERSSAGRIAARARGRYGGR  141

562) Ethha_0111 in NC_014828


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 78/183 (43%), Positives = 122/183 (67%), Gaps = 3/183 (1%)

Query  1    MLLGYARVSTGEQLLDRQIDALELAGVEKIYHEKVTGAKVDRPKLNELLNHLRSGDVIVV  60
            M +GYARVSTG Q L+ Q D L+  G EKI+++ ++G+K  RP L+  ++  RSGD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   SDLTRLSRSTKDLFSIVDRIQLAGADIKSLKES-WIDTTTPQGKLLFTIFAGISQFERDL  119
              L RL+R+  DL+++V+ ++  G  + SL E+  +D +++ G+LLF +FA++++FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  ISQRTREgiaaaasrgrhggrPSKRNPKADTALK-MYDSQEYTIPEICSATGLSKSTLYR  178
            I +R+  G  AA +RGR GGRP K N +  T LK +YD+    I  I     +S++T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YVA  181
            Y+ 
Sbjct  180  YLN  182

563) Ethha_0478 in NC_014828


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 78/183 (43%), Positives = 122/183 (67%), Gaps = 3/183 (1%)

Query  1    MLLGYARVSTGEQLLDRQIDALELAGVEKIYHEKVTGAKVDRPKLNELLNHLRSGDVIVV  60
            M +GYARVSTG Q L+ Q D L+  G EKI+++ ++G+K  RP L+  ++  RSGD IVV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   SDLTRLSRSTKDLFSIVDRIQLAGADIKSLKES-WIDTTTPQGKLLFTIFAGISQFERDL  119
              L RL+R+  DL+++V+ ++  G  + SL E+  +D +++ G+LLF +FA++++FER+L
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  120  ISQRTREgiaaaasrgrhggrPSKRNPKADTALK-MYDSQEYTIPEICSATGLSKSTLYR  178
            I +R+  G  AA +RGR GGRP K N +  T LK +YD+    I  I     +S++T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  179  YVA  181
            Y+ 
Sbjct  180  YLN  182

564) SGR_2539 in NC_010572


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 93.9 bits (337),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 76/186 (41%), Positives = 123/186 (67%), Gaps = 5/186 (2%)

Query  1    MLIGYARVSTADQNPDHQIDALLRAGVDRDHIHVDKASGAKASRPKLDLVMQLLREGDTL  60
            M IGYARVST+ QN + Q D L   G ++  I  D  SG+K+ RP LD  +++ R GDT+
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKSKRPGLDKAIEFARSGDTI  58

Query  61   KVTRLDRLSRSVLHLVTLGAELRGRSIGLHVIEQGI--DTSTMEGRAMFGMLSVLAELQR  118
             V RLDRL+R++ +L+TL  EL  R++++H +E+ I  D S+  G+ +F +++ +AE++R
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  119  ELIVANTNDGLasarargrvggrrprLTEDQAALAQRLYDEREKTVQQIADMFGVPRSTV  178
            +LI+  ++ G  +ARARGR GGR  +L   + +L + LYD+    ++ IA+   V+R+T+
Sbjct  119  NLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDN-GTPIKTIAEQWKVSRTTI  177

Query  179  YGHLDK  184
            Y  L+K
Sbjct  178  YRYLNK  183

565) MAB_p04c in NC_010394


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 93.6 bits (336),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 73/161 (46%), Positives = 113/161 (71%), Gaps = 4/161 (2%)

Query  4    LGYARVSTLHQSPDMQTKALTEAGAERIWTERMSGARDDDRPELAALLDYARRGDVLMVW  63
            +GYARVST  Q+ ++Q   L   G E+I  ++MSG++   RP L   +++AR GD ++VW
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSK-RPGLDKAIEFARSGDTIVVW  61

Query  64   RLDRLGRSLPHLLTVASDLQDRGVELRSLTEVI--DTSTAGGRLIFHVFgavaeferava  121
            RLDRLGR++ +L+T+ ++L++RGV ++SL E I  D S++ G+L+FH+F+A AEFER + 
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  aertaagvaaaraagRHPGRPG-LTADTIAAVQALDEAGTP  161
             ER++AG  AARA GR  GRP  L    ++ +++L + GTP
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTP  162

566) AAur_pTC10225 in NC_008712


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 93.6 bits (336),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 72/176 (41%), Positives = 115/176 (66%), Gaps = 4/176 (2%)

Query  8    GSQTTDLQRDALLAVGTDPESLYEDKASGKKEDRPQLAACLKALRHGDTLVVWKLDRLGR  67
            G Q  +LQ D L + G   E +++D  SG K  RP L   +   R GDT+VVW+LDRLGR
Sbjct  11   GLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGR  68

Query  68   DLRHLVNVVHDLTERGIGLKVLTGQGAAIDTTTASGKLVFGIFAALAEFERELISERTIa  127
            ++ +L+ +V++L ERG+++  L  +  ++D ++++G+L+F +FAA+AEFER+LI ER+ A
Sbjct  69   NMEDLITLVNELNERGVSFHSL-EENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSA  127

Query  128  glaaarargrnggrPYKMTPAKLRLAMASMGRPETKVSDLCTELGITRQTLYRHVS  183
            G  AARARGR GGRP K+    L L + ++    T +  +  +  ++R T+YR ++
Sbjct  128  GRIAARARGRYGGRPEKLNKRDLTL-LKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

567) KPR_3326 in NC_021232


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 93.6 bits (336),  Expect = 9e-21, Method: Compositional matrix adjust.
 Identities = 66/141 (47%), Positives = 103/141 (74%), Gaps = 2/141 (1%)

Query  40   RPGLRKAIRRLRPGDSLVVWKLDRLGRSVRDLITLVSELQERGIHFRSLTDSI--DTSTP  97
            RPGL KAI   R+GD++VVW+LDRLGR++ DLITLV+EL+ERG+ F+SL ++I  D S++
Sbjct  42   RPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSS  101

Query  98   AGRFFFHVMSALAEMERELIVERTRAGLAAAREQgriggrrriMTTEVVERCRRMLENGA  157
            +G+++FH+ +A+AE ER+LI+ER+ AG  AAR +GR GGR   +    +   + + +NG+
Sbjct  102  TGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT  161

Query  158  TRQQVADVIGVGVKTIYKYFP  178
              + +A+   V+  TIY+Y+ 
Sbjct  162  PIKTIAEQWKVSRTTIYRYLN  182

568) DPPB96 in NC_006139


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 75/182 (42%), Positives = 114/182 (63%), Gaps = 6/182 (3%)

Query  5    RIGYIRVST----LDQNTERQLENVHVDKVFTDKASGKDVQRPQLDLLLSFIREGDTVVV  60
            +IGY RVST    L+ + +R L+    +K+F D  SG   +RP LD  + F R GDT+VV
Sbjct  2    KIGYARVSTGLQNLNLQEDR-LNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   HSMdrlarnlddlrrlVQELTQRGIRIEFVKENLTFTGEDSPMANLLLSVMGAFAEFERA  120
              +DRL+RN++DL  LV+EL +RG+ ++ + EN+T  +  S+ ++LL+ + +AFAEFER 
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENIT-MDKSSSTGQLLFHLFAAFAEFERN  119

Query  121  LIRERQREGITLAQQRGAYRGRKRALSDADIAIVKSRVIAGEQKTQIARDFGISRETLYQ  180
            LI ER   G   A+ RG Y GR   L+  D++++K+    G     IA +  +SR T+Y+
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYR  179

Query  181  YL  182
            YL
Sbjct  180  YL  181

569) B2K_02710 in NC_017672


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 91.0 bits (326),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 86/184 (47%), Positives = 127/184 (70%), Gaps = 4/184 (2%)

Query  1    MIIGYARVStadqtldlqldalNKYGVKKVFQEKASGAKDNREQLQIALDILGEGDTLVV  60
            M IGYARVST+ Q L+LQ D LN  G  K+F++  SG+K +R  L+ A+++   GDT+VV
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   YKLDRLARSTVKLIQVLDEIQQKKAHLVSINDNI--DTTSAAGKALFGMLAVFAEFERNI  118
             +LDRL+R+   LI +++E++++   + S+++NI  D +S++G+ LF ++A FAEFERN+
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  IIERTQaglkaarargrkggrPVSDQKKIEKALK-LYDTQTYTVKEIEEMTGVKRATLYR  177
            I+ER+ AG  AARARGR GGRP   +K+    LK LYD  T  +K I E   V R+T+YR
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

Query  178  AIAK  181
             + K
Sbjct  180  YLNK  183

570) MMAR_p15 in NC_010604


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 91.0 bits (326),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 71/161 (45%), Positives = 111/161 (69%), Gaps = 4/161 (2%)

Query  4    LGYARVSTLHQSPDMQTKALTEAGAERIWTERMSGARDDDRPELAALLDYARRGDVLMVW  63
            +GYARVST  Q+ ++Q   L   G E+I  ++MSG++   RP L   +++AR GD ++VW
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSK-RPGLDKAIEFARSGDTIVVW  61

Query  64   RLDSLGRSLPHLLTVASDLQARGIELRSLTEAI--DTSTAGGRLIFHVFgavaeferava  121
            RLD LGR++ +L+T+ ++L+ RG+ ++SL E I  D S++ G+L+FH+F+A AEFER + 
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  122  aertaagvaaaraagRHPGRPG-LTADTIAAVQALDEAGTP  161
             ER++AG  AARA GR  GRP  L    ++ +++L + GTP
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTP  162

571) MLP_44250 in NC_015635


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 90.7 bits (325),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 66/143 (47%), Positives = 108/143 (76%), Gaps = 7/143 (4%)

Query  3    QLGYTRVSTASqdaqlqldalvaagvqKRDVFADITSGSRSAAERPGMQKLLGYAEPGDT  62
            ++GY+RVST+ Q+ +LQ D L + G +K  +F D  SGS+S   RPG++K + +A +GDT
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEK--IFNDHMSGSKS--KRPGLDKAIEFARSGDT  57

Query  63   VVVWRVDRLGRSLIDVLNTVNLLRDRDVAVRSVSDGI--DPATSTGRLMLNMLATLAEYE  120
            +VVWR+DRLGR++ D++  VN L +R+V+ +S+ + I  D ++STG+L+++++A++AE+E
Sbjct  58   IVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFE  117

Query  121  RELIVERVNAGIAAARQNGTRFG  143
            R+LI+ER +AG  AAR  G R+G
Sbjct  118  RNLILERSSAGRIAARARG-RYG  139

572) Oant_4606 in NC_009669


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 90.5 bits (324),  Expect = 7e-20, Method: Compositional matrix adjust.
 Identities = 57/136 (42%), Positives = 97/136 (72%), Gaps = 3/136 (2%)

Query  3    RIGYARVSTIDQDLDIQNERLKAAGCEIIRAETGSGASRKGRSELETIKQFLHTGDELVV  62
            +IGYARVST  Q+L++Q++RL++ GCE I  +  SG+  K R+ L+   +F ++GD +VV
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSK-RPGLDKAIEFARSGDTIVV  60

Query  63   LRLDRLGRSTRDVLNLVHELDEKGASLRVLEPEVT--TAGSMGRIVITILGMVADMELKF  120
             RLDRLGR+  D++ LV+EL+E+G S++ LE ++T   ++S G++++ +++  A+ E ++
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  121  IKDRQRAGIEAAKAEG  136
            I +R  AG  AA+A G
Sbjct  121  ILERSSAGRIAARARG  136

573) ACMV_P1_00880 in NC_015178


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 89.9 bits (322),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 68/160 (43%), Positives = 112/160 (70%), Gaps = 2/160 (1%)

Query  6    AAGCVKIFddrasgaradraglraaldYVRDGDVLIVWKLDRLGRSLPDLIETVTSLATR  65
            + GC KIF+D+ SG+++ R+GL  A+++ R GD ++VW+LDRLGR++ DLI  V  L  R
Sbjct  24   THGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNER  83

Query  66   SVGFRSLTEAI--DTTTPGGRLVFHLFGALGQFERDLIQERTraglaaaaargrkggrkP  123
            +V+F+SL E I  D +++ G+L+FHLF+A+++FER+LI ER+ AG  AA ARGR GGR  
Sbjct  84   GVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPE  143

Query  124  VITNEKLNRARAIIASGLTVREAAARLRVGKTALYDALRR  163
             + +  L   +++  +G  ++  A + +V++T++Y  L +
Sbjct  144  KLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLNK  183

574) KPR_2781 in NC_021232


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 89.4 bits (320),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 67/141 (48%), Positives = 103/141 (74%), Gaps = 2/141 (1%)

Query  40   RPGLRKAIRRLRPGDSLVVWKLDRLGRSVRDLITLVSELQERGIHFRSLTDSI--DTSTP  97
            RPGL KAI   R+GD++VVW+LDRLGR++ DLITLV+EL+ERG+ F+SL ++I  D S++
Sbjct  42   RPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSS  101

Query  98   AGRFFFHVMSALAEMERELIVERTRAGLAAAreqgrvggrrrvmteevvercrrMLENGA  157
            +G+++FH+ +A+AE ER+LI+ER+ AG  AAR +GR GGR   +    +   + + +NG+
Sbjct  102  TGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT  161

Query  158  TRQQIADVIGVNVKTLYKYLP  178
              + IA+   V+  T+Y+YL 
Sbjct  162  PIKTIAEQWKVSRTTIYRYLN  182

575) GDI_3875 in NC_010124


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 89.4 bits (320),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 74/181 (41%), Positives = 123/181 (68%), Gaps = 3/181 (1%)

Query  1    MKIGYARVSRADKQDLSMQIQALEKEGCDTIYQDTASAKNTARPQLQEMLRYARQGDEIV  60
            MKIGYARVS ++ Q+L++Q + L+ +GC+ I++D  S+ ++ RP L+  + +AR GD IV
Sbjct  1    MKIGYARVS-TGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIV  59

Query  61   VWrldrlsrsltdlisltddlGARGIGLRSLTEPVY-QTSGPMGRVVLQIMAVLAEFERA  119
            VWRLDRL+R++ DLI+L ++L  RG++++SL E +  + S++ G++++++ A +AEFER 
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  120  TIIERTKAGLRAAKERGVHVGRPKLLSEDQAAHVVQEIEAGRLTLSEAANLFGVSRSTIS  179
             I+ER+ AG  AA+ RG   GRP  L+  + + +    + G   +   A+   VSR+TI 
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIY  178

Query  180  R  180
            R
Sbjct  179  R  179

576) AZOLI_p30410 in NC_016623


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 88.9 bits (318),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 61/152 (41%), Positives = 100/152 (66%), Gaps = 4/152 (2%)

Query  14   IGYVRMSIDDQKLDLQIAALIAAEIRPNDVRSDKTNSLRSEQPVLAGALKAFRRSDTLMV  73
            IGY R+S + Q+L+LQ   L +     + + +D  ++ +S +P L  A+   R +DT++V
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  74   WRLDRLAHSTKELLPIGDRLQEAKVSLRSLSEY--LDTSTATGKLVFTLVSTMAEFERNL  131
            WRLDRL+++  +L+ + + L+E  VS++SL E   +D S++TG+L+F L ++ AEFERNL
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  132  ISERTKSGMSAARDRGLPEGHPAKLVEKRLSI  163
            I ER+ +G  AAR RG   G+P KL  + L++
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLNKRDLTL  152

577) SAAV_c04 in NC_013453


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 88.9 bits (318),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 73/179 (41%), Positives = 119/179 (67%), Gaps = 4/179 (2%)

Query  3    KIGYARVSTISQSLETQINLLKAEGCIKIFSEKVSGKKTNRSKLDECLKYLREDDVLVVT  62
            KIGYARVST  Q+L+ Q + L+++GC KIF++ +SG K++R+ LD  + + R +D +VV 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  63   KIDRLGRTTKQLINLASWLQEHNIELKILDGNFNMN--SPLGKMIFTVMSGFAELETDLN  120
            ++DRLGR   +LI L + L+E+ + +  L+ N+ M+  S+ G+++F + ++FAE+E +L 
Sbjct  62   RLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLI  121

Query  121  RERTLEGLNEakargrkggrPG-VTKDVKNYVMYLYNNTELSGNEIARKTGVSRSTVYR  178
             ER+  G   A+ARGR GGRP  + K     +  LY+N   + + IA +  VSR+T+YR
Sbjct  122  LERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

578) MAB_1820c in NC_010397


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 88.4 bits (316),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 76/184 (42%), Positives = 125/184 (68%), Gaps = 6/184 (3%)

Query  13   LGYARVSTAHQSLDQQLDALTEAGVGPDRIYKDKLSGTSTREQRPGLAALLDYARPGDGI  72
            +GYARVST+ Q+L+ Q D L   G   ++I++D +SG+ ++  RPGL   +++AR+GD I
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSK--RPGLDKAIEFARSGDTI  58

Query  73   VVVGIDRLGRNAAEVMATIRDLAEREIVLHSLREGI--DSSNATGRMIAGVlaslaelel  130
            VV  +DRLGRN  ++++ + +L ER + +HSL E I  D S++TG+++  ++A++AE+E 
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  131  elgrerraaaresrrargQHIGRPKALDNAKAALAQRMHLAGEPVLTIANTLGVSRATVY  190
            +L  ER +A+R + RARG+  GRP  L++   +L + +   G P+ TIA+   VSR+T+Y
Sbjct  119  NLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  191  RVLA  194
            R L 
Sbjct  179  RYLN  182

579) tnpR in NC_018150


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 88.4 bits (316),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 76/184 (42%), Positives = 125/184 (68%), Gaps = 6/184 (3%)

Query  13   LGYARVSTAHQSLDQQLDALTEAGVGPDRIYKDKLSGTSTREQRPGLAALLDYARPGDGI  72
            +GYARVST+ Q+L+ Q D L   G   ++I++D +SG+ ++  RPGL   +++AR+GD I
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGC--EKIFNDHMSGSKSK--RPGLDKAIEFARSGDTI  58

Query  73   VVVGIDRLGRNAAEVMATIRDLAEREIVLHSLREGI--DSSNATGRMIAGVlaslaelel  130
            VV  +DRLGRN  ++++ + +L ER + +HSL E I  D S++TG+++  ++A++AE+E 
Sbjct  59   VVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFER  118

Query  131  elgrerraaaresrrargQHIGRPKALDNAKAALAQRMHLAGEPVLTIANTLGVSRATVY  190
            +L  ER +A+R + RARG+  GRP  L++   +L + +   G P+ TIA+   VSR+T+Y
Sbjct  119  NLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  191  RVLA  194
            R L 
Sbjct  179  RYLN  182

580) MPD5_0180 in NC_016938


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 74/177 (42%), Positives = 122/177 (69%), Gaps = 4/177 (2%)

Query  6    GYARVSTQDQNLELQIDALKKLGATIIYKEKASGKKRERQELQALLNILSPGDTIAVYKF  65
            GYARVST  QNL+LQ D L+  G   I+++  SG K  R  L+  +++  +GDTI V ++
Sbjct  4    GYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRL  63

Query  66   DRISRSTKHLIELAEYFSENNIQFISIQDNV--DTSTSMGRFFFRLMASIAELERDIIVE  123
            DR++R+  +LI L + ++E  + F S+++N+  D S+S G+++F+L A++AE+ER++I+E
Sbjct  64   DRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILE  123

Query  124  RTNagliaarargrlggrPPK-DSQVIEKALNLYQSKQYSIKEITQLTGVSKSLLYR  179
            R++AG IAARARGR GGRP K + + +     LY++   +IK I++   VS++ +YR
Sbjct  124  RSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

581) MPTP_0191 in NC_015516


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 72/177 (41%), Positives = 121/177 (69%), Gaps = 4/177 (2%)

Query  6    GYARVSTQDQNLELQIDALKKLGAIIIYKEKASGKKRERQELQALLNILSPGDTIAVYKF  65
            GYARVST  QNL+LQ D L+  G   I+++  SG K  R  L+  +++  +GDTI V ++
Sbjct  4    GYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRL  63

Query  66   DRISPSTKHLIELAEYFSENNIQFISIQDNV--DTSTSMGRFFFRLMASIAELERDIIVE  123
            DR++ +  +LI L + ++E  + F S+++N+  D S+S G+++F+L A++AE+ER++I+E
Sbjct  64   DRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILE  123

Query  124  RTNADLIaarargrlggrPPK-DSQVIEKALNLYQSKQYSIKEITQLTGVSKSLLYR  179
            R++A+ IAARARGR GGRP K + + +     LY++   +IK I++   VS++ +YR
Sbjct  124  RSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQWKVSRTTIYR  179

582) PAC1_03945 in NC_018707


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 75/187 (41%), Positives = 118/187 (64%), Gaps = 6/187 (3%)

Query  1    MHVGYARVSTLEQDLSAQREALERLGVESKNIYFDHGLTGTTRARPGLREALAATREGDT  60
            M +GYARVST  Q+L+ Q + L+  G E  +I+ DH ++G+   RPGL  A+  +R GDT
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCE--KIFNDH-MSGSKSKRPGLDKAIEFARSGDT  57

Query  61   LVVTKLDRLARSLPDARDIADELTIKGVAL-SLGGSVY-DPNDPVGRLLFNALGMVAEFE  118
            +VV +LDRL+R++ D   + +EL  +GV++ SL  ++  D + + G+LLF+ ++  AEFE
Sbjct  58   IVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFE  117

Query  119  ADLIRLRTREGMAIARskgklkgkkpklspSQRKHLMTLHTAGEHTQAELAELFNVSRTT  178
             +LI  R+  G   AR++G+  G+  KL+  +   L TL   G   ++ +AE  +VSRTT
Sbjct  118  RNLILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKT-IAEQWKVSRTT  176

Query  179  IYRELRR  185
            IYR L +
Sbjct  177  IYRYLNK  183

583) gin in NC_016594


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 82.3 bits (293),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 69/148 (47%), Positives = 102/148 (69%), Gaps = 3/148 (2%)

Query  43   VWSDKASGVRSDRPGLAGALKACRRGDVLVVWRLDRLARSTAELLRIADDLNTRGVVLRS  102
            + +D  SG +S RPGL  A+   R GD +VVWRLDRL+R+  +L+ + ++LN RGV ++S
Sbjct  30   IFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHS  89

Query  103  LTESI--DTGGAVGRLVFTVISAMAEFERNLISErtkagmaaarakghrggrpakLTDRQ  160
            L E+I  D +++ G+L+F +++A AEFERNLI ER+ AG  AARA+G+ GGRP KL  R+
Sbjct  90   LEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKRD  149

Query  161  LGMAERLLADPATTGQQVADQFGVHRGT  188
            L +  + L D +T  + +A+Q  V R T
Sbjct  150  LTLL-KTLYDNGTPIKTIAEQWKVSRTT  176

584) Arth_4319 in NC_008538


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 81.0 bits (288),  Expect = 5e-17, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 118/189 (63%), Gaps = 1/189 (0%)

Query  11   IGYARVSTRGQSLDAQVDALVAAGAIKVFMEHASGATQARARWQDCLEHLQPGNILVVTD  70
            IGYARVST  Q+L+ Q D L + G  K+F +H SG+   R+  +  +E  ++G+ +VV  
Sbjct  3    IGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWR  62

Query  71   LTRLGRSTADLSDIVTVLGRRGIGFRSLAEP-WLDTTSAHGKLIFDMFASLAEYERSRLS  129
            L RLGR+  DL  +V  L  RG++F+SL E   +D +S+ G+L+F++FA++AE+ER+ + 
Sbjct  63   LDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLIL  122

Query  130  ErtraglaaakargrqggrPTAMTPAKLEAAKDLRRQGKKLQEIAETLSVSMSTLTRALG  189
            ER+ AG  AA+ARGR GGRP  +    L   K L  +G  ++ IAE   VS +T+ R L 
Sbjct  123  ERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLN  182

Query  190  PRTGKQTQE  198
                ++ ++
Sbjct  183  KLNNQENKD  191

585) Dtpsy_0846 in NC_011992


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 80.7 bits (287),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 61/146 (42%), Positives = 98/146 (68%), Gaps = 3/146 (2%)

Query  5    GYARVSTLEQNTAAQLAAFRRAGIEQVVEEKRSGVKD-RPELEKLLLQLQAGDVLVVYKL  63
            GYARVST  QN   Q   +   G E++ ++  SG K  RP L+K +   ++GD +VV +L
Sbjct  4    GYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVWRL  63

Query  64   DRLARSVSHFVKVFDQLKAKGVGFRSLTEAI--ETDTPQGRMFLHLLTAFAEFERELIRE  121
            DRL+R++ +++ + ++L+ +GV+F+SL E I  +  ++ G++++HL++AFAEFER+LI E
Sbjct  64   DRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILE  123

Query  122  RCLAGQRAARAAGKTWGRKRVLSDDD  147
            R  AG+ AARA G+  GR   L+  D
Sbjct  124  RSSAGRIAARARGRYGGRPEKLNKRD  149

586) Pnap_3928 in NC_008781


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 78.4 bits (278),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 108/184 (59%), Gaps = 8/184 (4%)

Query  5    NVGYVRVSTIIQNTARQLDGVSLH---KIFEDKASGKNVDRPQLTACLAHLREGDTLHVH  61
            ++GY RVST +QN   Q D ++ H   KIF+D  SG +  RP L   +   R GDT+ V 
Sbjct  2    KIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVVW  61

Query  62   SMdrlcrnlddlrrIVKDLTSRGVLVRFHKEGLSFT-GEDSPMSNLLLSMLGAVAEFERS  120
             +DRL RN++DL  +V++L  RGV   FH    ++T +  S+ ++LL+ +++A AEFER+
Sbjct  62   RLDRLGRNMEDLITLVNELNERGV--SFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  121  IILERQREGIQIAKVEGKYKGRKASLTKERVLELQRRA-GAGEKKTVLAREFGVSRETVY  179
            +ILER   G   A+  G+Y GR   L K R L L +   + G     +A +  VSR T+Y
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNK-RDLTLLKTLYDNGTPIKTIAEQWKVSRTTIY  178

Query  180  TYLN  183
             YLN
Sbjct  179  RYLN  182

587) AZOBR_p430011 in NC_016596


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 59/146 (41%), Positives = 99/146 (68%), Gaps = 2/146 (1%)

Query  1    MKLGYCRVSTDDQHLDAQRAALTAAGVERIYEEKESGGRWDRPVLHELLRSLRPGDEvlv  60
            MK+GY RVST+ Q+L+ Q   L + G E+I+++  SG++  RP L+  +   R+GD ++V
Sbjct  1    MKIGYARVSTGLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIVV  60

Query  61   vrldrlsrsvrdtlTILERIGETGAGFRSLTEGI--ETVSPAGRMLTTMLAAFAEYERAI  118
             RLDRL+R++ D +T+++ + E G +F+SL E I  +  S++G++L  ++AAFAE+ER +
Sbjct  61   WRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNL  120

Query  119  LRQRTRDGLAAAKRRGSCLGRRPKLS  144
            + +R+  G  AA+ RG   GR  KL+
Sbjct  121  ILERSSAGRIAARARGRYGGRPEKLN  146

588) ACMV_P3_00090 in NC_015179


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 67.1 bits (235),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 124/185 (68%), Gaps = 6/185 (3%)

Query  3    MVGYARVSTREERQIFDRQMDALTVAGCERIFEDRGSGARSDRPGIKACldylrrgdvlv  62
             +GYARVST    Q ++ Q D L   GCE+IF+D+ SG++S RPG+   +++ R GD +V
Sbjct  2    KIGYARVST--GLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIV  59

Query  63   vldldrlgrlAGELIGLVDDLEARGVGFRAL--NTAFDTTTPAGRAFLQIQAAFAEMERN  120
            V  LDRLGR   +LI LV++L+ RGV+F++L  N + D ++++G+ ++++ AAFAE ERN
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  121  VIRQRVREGIVaarargrkggrprMMTAERLRYAQHLMADSTRSIPSICRELGGIPASTL  180
            +I +R   G +AARARGR GGRP  +    L   + L  ++T +I +I  +   ++ +T+
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQW-KVSRTTI  177

Query  181  YHYMK  185
            Y+Y++
Sbjct  178  YRYLN  182

589) Acry_3562 in NC_009470


> NC_007168_R3|14|G14|70727308|YP_254224.1|Staphylococcus_haemolyticus_JCSC1435|+|9294..9872|binR|SH2309|resolvase/integrase 
BinR
Length=192

 Score = 66.6 bits (233),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 124/185 (68%), Gaps = 6/185 (3%)

Query  3    MVGYARVSTREERQIFDRQMDALTVAGCERIFEDRGSGARSDRPGIKACldylrrgdvlv  62
             +GYARVST    Q ++ Q D L   GCE+IF+D+ SG++S RPG+   +++ R GD +V
Sbjct  2    KIGYARVST--GLQNLNLQEDRLNTHGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTIV  59

Query  63   vldldrlgrlAGELIGLVDDLEARGVGFRAL--NTAFDTTTPAGRAFLQIQAAFAEMERN  120
            V  LDRLGR   +LI LV++L+ RGV+F++L  N + D ++++G+ ++++ AAFAE ERN
Sbjct  60   VWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERN  119

Query  121  VIRQRVREGIVaarargrkggrprMMTAERLRYAQHLMADSTRSIPSICRELGGIPASTL  180
            +I +R   G +AARARGR GGRP  +    L   + L  ++T +I +I  +   ++ +T+
Sbjct  120  LILERSSAGRIAARARGRYGGRPEKLNKRDLTLLKTLYDNGT-PIKTIAEQW-KVSRTTI  177

Query  181  YHYVQ  185
            Y+Y++
Sbjct  178  YRYLN  182