Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
pathogenicity 1 island effector protein |
NC_003198 (Salmonella enterica CT18) |
1e-30 |
100 |
|
hypothetical protein |
NC_016832 (Salmonella enterica P-stx-12) |
1e-30 |
100 |
|
pathogenicity island 1 effector protein |
NC_004631 (Salmonella enterica Ty2) |
1e-30 |
100 |
|
pathogenicity 1 island effector protein |
NC_021176 (Salmonella enterica Ty21a) |
1e-30 |
100 |
|
type III secretion apparatus needle protein |
NC_011149 (Salmonella enterica SL483) |
1e-30 |
99 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
4e-30 |
98 |
|
pathogenicity island 1 effector protein |
NC_011147 (Salmonella enterica AKU12601) |
5e-30 |
97 |
|
pathogenicity 1 island effector protein |
NC_006511 (Salmonella enterica ATCC 9150) |
5e-30 |
97 |
|
type III secretion system needle complex protein PrgI |
NC_021820 (Salmonella enterica 08-1736) |
1e-29 |
95 |
|
needle complex major subunit |
NC_016856 (Salmonella enterica 14028S) |
1e-29 |
95 |
|
pathogenicity 1 island effector protein |
NC_011274 (Salmonella enterica 287/91) |
1e-29 |
95 |
|
type III secretion apparatus needle protein |
NC_022241 (Salmonella enterica 3114) |
1e-29 |
95 |
|
type III secretion system needle complex protein PrgI |
NC_021810 (Salmonella enterica 41578) |
1e-29 |
95 |
|
type III secretion system apparatus |
NC_017046 (Salmonella enterica 798) |
1e-29 |
95 |
|
Type III secretion cytoplasmic protein (YscF) |
NC_017623 (Salmonella enterica B182) |
1e-29 |
95 |
|
pathogenicity 1 island effector protein |
NC_022221 (Salmonella enterica CDC1983-67) |
1e-29 |
95 |
|
type III secretion system needle complex protein PrgI |
NC_021844 (Salmonella enterica CFSAN000189) |
1e-29 |
95 |
|
type III secretion system needle complex protein PrgI |
NC_021814 (Salmonella enterica CFSAN001921) |
1e-29 |
95 |
|
type III secretion system needle complex protein PrgI |
NC_020307 (Salmonella enterica CFSAN001992) |
1e-29 |
95 |
|
type III secretion system needle complex protein PrgI |
NC_021812 (Salmonella enterica CFSAN002069) |
1e-29 |
95 |
|
type III secretion apparatus needle protein |
NC_011205 (Salmonella enterica CT_02021853) |
1e-29 |
95 |
|
type III secretion apparatus needle protein |
NC_011094 (Salmonella enterica CVM19633) |
1e-29 |
95 |
|
pathogenicity 1 island effector protein |
NC_016854 (Salmonella enterica D23580) |
1e-29 |
95 |
|
needle complex major subunit |
NC_003197 (Salmonella enterica LT2) |
1e-29 |
95 |
|
pathogenicity 1 island effector protein |
NC_011294 (Salmonella enterica P125109) |
1e-29 |
95 |
|
pathogenicity 1 island effector protein |
NC_012125 (Salmonella enterica RKS4594) |
1e-29 |
95 |
|
pathogenicity 1 island effector protein |
NC_016831 (Salmonella enterica RKS5078) |
1e-29 |
95 |
|
type III secretion system needle complex protein PrgI |
NC_021984 (Salmonella enterica S06004) |
1e-29 |
95 |
|
cell invasion protein |
NC_006905 (Salmonella enterica SC-B67) |
1e-29 |
95 |
|
type III secretion system apparatus |
NC_016810 (Salmonella enterica SL1344) |
1e-29 |
95 |
|
type III secretion apparatus needle protein |
NC_011080 (Salmonella enterica SL254) |
1e-29 |
95 |
|
type III secretion apparatus needle protein |
NC_011083 (Salmonella enterica SL476) |
1e-29 |
95 |
|
needle complex major subunit |
NC_016857 (Salmonella enterica ST4/74) |
1e-29 |
95 |
|
pathogenicity 1 island effector protein |
NC_016860 (Salmonella enterica T000240) |
1e-29 |
95 |
|
type III secretion system needle complex protein PrgI |
NC_021151 (Salmonella enterica U288) |
1e-29 |
95 |
|
needle complex major subunit |
NC_016863 (Salmonella enterica UK-1) |
1e-29 |
95 |
|
Protein prgI |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
1e-29 |
95 |
|
type III secretion system needle complex protein PrgI |
NC_021818 (Salmonella enterica CFSAN002050) |
3e-29 |
92 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
1e-27 |
93 |
|
pathogenicity 1 island effector protein |
NC_015761 (Salmonella bongori NCTC 12419) |
2e-27 |
87 |
|
Type III secretion cytoplasmic protein (YscF) |
NC_021870 (Salmonella bongori N268-08) |
2e-26 |
88 |
|
cell invasion protein - cytoplasmic |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
2e-23 |
73 |
|
type III secretion system protein |
NC_017626 (Escherichia coli 042) |
3e-20 |
62 |
|
type III secretion system needle protein |
NC_017646 (Escherichia coli CE10) |
3e-20 |
62 |
|
type III secretion apparatus needle protein |
NC_011353 (Escherichia coli EC4115) |
3e-20 |
62 |
|
type III secretion system protein |
NC_017633 (Escherichia coli ETEC H10407) |
3e-20 |
62 |
|
protein EprI |
NC_017663 (Escherichia coli P12b) |
3e-20 |
62 |
|
EprI |
NC_002695 (Escherichia coli Sakai) |
3e-20 |
62 |
|
type III secretion apparatus protein EprI |
NC_013008 (Escherichia coli TW14359) |
3e-20 |
62 |
|
type III secretion system needle protein |
NC_011751 (Escherichia coli UMN026) |
3e-20 |
62 |
|
protein EprI |
NC_017906 (Escherichia coli Xuzhou21) |
3e-20 |
62 |
|
type III secretion apparatus needle protein EprI |
NC_017641 (Escherichia coli UMNK88) |
6e-20 |
62 |
|
MxiH, component of the Mxi-Spa secretion machinery |
NC_017319 (Shigella flexneri 2002017) |
8e-19 |
69 |
|
Mxi-Spa secretion machinery protein MxiH |
NC_004851 (Shigella flexneri 301) |
8e-19 |
69 |
|
MxiH |
NC_007385 (Shigella sonnei Ss046) |
8e-19 |
69 |
|
type III secretion apparatus needle protein mxiH |
NC_010660 (Shigella boydii CDC 3083-94) |
8e-19 |
68 |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
2e-17 |
61 |
|
type III secretion system protein PrgI |
NC_013961 (Erwinia amylovora CFBP1430) |
2e-17 |
61 |
|
type III secretion system needle protein |
NC_010468 (Escherichia coli ATCC 8739) |
3e-17 |
65 |
|
type III secretion apparatus needle protein |
NC_009800 (Escherichia coli HS) |
3e-17 |
65 |
|
type III secretion apparatus |
NC_007712 (Sodalis glossinidius morsitans) |
3e-16 |
50 |
|
type III secretion apparatus |
NC_010694 (Erwinia tasmaniensis Et1/99) |
2e-13 |
48 |
|
xanthomonas secretion apparatus protein |
NC_013722 (Xanthomonas albilineans GPE PC73) |
6e-13 |
48 |
|
protein PrgI |
NC_016830 (Pseudomonas fluorescens F113) |
8e-13 |
50 |
|
MxiH |
NC_007607 (Shigella dysenteriae Sd197) |
5e-12 |
65 |
|
type III secretion needle MxiH like |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
6e-10 |
55 |
|
Type III secretion needle MxiH like protein |
NC_017445 (Erwinia sp. Ejp617) |
6e-10 |
55 |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
3e-09 |
51 |
|
type III secretion cytoplasmic protein |
NC_019670 (Pseudomonas sp. UW4) |
5e-08 |
46 |
|
type III secretion system protein |
NC_010554 (Proteus mirabilis HI4320) |
0.032 |
50 |
|
type III secretion system protein |
NC_022000 (Proteus mirabilis BB2000) |
0.11 |
48 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_004631_P2' AND ph.id_pai_orf='14' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc