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PAthogenisity Island DataBase (PAI DB)

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Homologs of cag20 gene of AY330637

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPB14_04135
( YP_006219540.1 )

cag pathogenicity island protein H

NC_017733
(Helicobacter pylori HUP-B14)

1e-160

2) HPLT_02670
( YP_005772677.1 )

cag pathogenicity island protein H

NC_017362
(Helicobacter pylori Lithuania75)

1e-160

3) cagH
( YP_002301182.1 )

cag pathogenicity island protein H

NC_011498
(Helicobacter pylori P12)

1e-160

4) HPAG1_0516
( YP_627257.1 )

cag pathogenicity island protein H

NC_008086
(Helicobacter pylori HPAG1)

2e-160

5) HPELS_04035
( YP_005424927.1 )

cag pathogenicity island protein H

NC_017063
(Helicobacter pylori ELS37)

6e-160

6) cagH
( YP_005775741.1 )

cag island protein

NC_017366
(Helicobacter pylori F32)

6e-160

7) cag20
( YP_005793171.1 )

cag pathogenicity island protein H

NC_017382
(Helicobacter pylori 51)

1e-159

8) cagH
( YP_003728723.1 )

cag pathogenicity island protein H

NC_014256
(Helicobacter pylori B8)

1e-159

9) cagH
( YP_005779052.1 )

cag island protein

NC_017368
(Helicobacter pylori F16)

1e-159

10) cagH
( YP_005777282.1 )

cag island protein

NC_017367
(Helicobacter pylori F57)

1e-159

11) HPSNT_02785
( YP_005786697.1 )

cag pathogenicity island protein H

NC_017376
(Helicobacter pylori Santal49)

1e-159

12) HP0541
( NP_207337.1 )

cag pathogenicity island protein (cag20)

NC_000915
(Helicobacter pylori 26695)

9e-160

13) C694_02790
( YP_006934464.1 )

cag pathogenicity island protein (cag20)

NC_018939
(Helicobacter pylori 26695)

9e-160

14) C695_02790
( YP_006893029.1 )

cag pathogenicity island protein (cag20)

NC_018937
(Helicobacter pylori Rif1)

9e-160

15) C730_02790
( YP_006936070.1 )

cag pathogenicity island protein (cag20)

NC_018938
(Helicobacter pylori Rif2)

9e-160

16) HPKB_0802
( YP_005762310.1 )

cag pathogenicity island protein (cag20)

NC_017354
(Helicobacter pylori 52)

2e-159

17) cagH
( YP_007536673.1 )

cag island protein

NC_020508
(Helicobacter pylori OK113)

2e-159

18) K750_04070
( YP_007982170.1 )

sodium:calcium antiporter

NC_021217
(Helicobacter pylori UM037)

3e-159

19) HPGAM_02755
( YP_005780274.1 )

cag island protein

NC_017371
(Helicobacter pylori Gambia94/24)

3e-159

20) HMPREF0462_0876
( YP_005785443.1 )

cag pathogenicity island protein

NC_017375
(Helicobacter pylori 83)

4e-159

21) cagH
( YP_005774530.1 )

cag island protein

NC_017365
(Helicobacter pylori F30)

6e-159

22) HPIN_04180
( YP_005782147.1 )

cag pathogenicity island protein H

NC_017372
(Helicobacter pylori India7)

6e-159

23) cagH
( NP_223207.1 )

cag island protein

NC_000921
(Helicobacter pylori J99)

6e-159

24) HMPREF4655_21061
( YP_005770148.1 )

cag pathogenicity island protein

NC_017360
(Helicobacter pylori 35A)

1e-158

25) K747_06775
( YP_007979542.1 )

sodium:calcium antiporter

NC_021215
(Helicobacter pylori UM032)

9e-159

26) K748_08015
( YP_008337457.1 )

sodium:calcium antiporter

NC_021882
(Helicobacter pylori UM298)

9e-159

27) K749_01410
( YP_007980079.1 )

sodium:calcium antiporter

NC_021216
(Helicobacter pylori UM299)

9e-159

28) K751_03335
( YP_007983647.1 )

sodium:calcium antiporter

NC_021218
(Helicobacter pylori UM066)

3e-158

29) HPPC18_02580
( YP_006228782.1 )

cag island protein

NC_017742
(Helicobacter pylori PeCan18)

2e-157

30) HPV225_0545
( YP_005763476.1 )

cag pathogenicity island protein

NC_017355
(Helicobacter pylori v225d)

4e-157

31) HPPN120_02640
( YP_005788204.1 )

cag pathogenicity island protein H

NC_017378
(Helicobacter pylori Puno120)

5e-157

32) HPPN135_02670
( YP_005789751.1 )

cag pathogenicity island protein H

NC_017379
(Helicobacter pylori Puno135)

7e-157

33) HPSH112_04330
( YP_006227560.1 )

cag island protein

NC_017741
(Helicobacter pylori Shi112)

1e-152

34) HPSH169_02780
( YP_006225748.1 )

cag island protein

NC_017740
(Helicobacter pylori Shi169)

8e-149

35) HPSH417_02585
( YP_006224164.1 )

cag island protein

NC_017739
(Helicobacter pylori Shi417)

8e-149

36) cagH
( YP_007538425.1 )

cag island protein

NC_020509
(Helicobacter pylori OK310)

4e-148

37) hp2018_0524
( YP_005791355.1 )

cag island protein

NC_017381
(Helicobacter pylori 2018)

1e-147

38) HPCU_02960
( YP_005766666.1 )

cag pathogenicity island protein H

NC_017358
(Helicobacter pylori Cuz20)

5e-146

39) hp908_0543
( YP_005765046.1 )

cag island protein

NC_017357
(Helicobacter pylori 908)

6e-140

40) hp2017_0522
( YP_005783511.1 )

cag island protein

NC_017374
(Helicobacter pylori 2017)

9e-140

41) cagH
( YP_006338472.1 )

cag pathogenicity island protein H

NC_017926
(Helicobacter pylori XZ274)

2e-139

42) cagH
( YP_002266127.1 )

cag pathogenicity island protein H

NC_011333
(Helicobacter pylori G27)

2e-139

43) HPPC_02675
( YP_003926823.1 )

cag pathogenicity island protein H

NC_014555
(Helicobacter pylori PeCan4)

4e-139

44) HPSJM_02590
( YP_003928431.1 )

cag pathogenicity island protein H

NC_014560
(Helicobacter pylori SJM180)

2e-138

45) HPSH_04185
( YP_001910302.1 )

cag pathogenicity island protein CagH

NC_010698
(Helicobacter pylori Shi470)

6e-137

• Sequence Alignments

1) HPB14_04135 in NC_017733


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  558 bits (2107),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 368/370 (99%), Positives = 370/370 (100%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGTNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG+NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

2) HPLT_02670 in NC_017362


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  558 bits (2108),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 369/370 (99%), Positives = 370/370 (100%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNTQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFN+QGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

3) cagH in NC_011498


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  558 bits (2108),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 369/370 (99%), Positives = 370/370 (100%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGTNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG+NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

4) HPAG1_0516 in NC_008086


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  558 bits (2106),  Expect = 2e-160, Method: Compositional matrix adjust.
 Identities = 369/370 (99%), Positives = 369/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGANPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSGANPMTTPACPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

5) HPELS_04035 in NC_017063


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  556 bits (2099),  Expect = 6e-160, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 369/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNTQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFN+QGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLTVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVL+VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

6) cagH in NC_017366


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  556 bits (2099),  Expect = 6e-160, Method: Compositional matrix adjust.
 Identities = 368/370 (99%), Positives = 369/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEIMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVE+MSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGANPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSGANPMTTPACPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

7) cag20 in NC_017382


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  555 bits (2094),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKNSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQK+SYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

8) cagH in NC_014256


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  555 bits (2096),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 368/370 (99%), Positives = 369/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstssVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTS+VAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

9) cagH in NC_017368


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  555 bits (2095),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 368/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVETMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVE MSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

10) cagH in NC_017367


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  555 bits (2094),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALAANALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALA+NALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

11) HPSNT_02785 in NC_017376


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  555 bits (2095),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 367/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNRSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASN SMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIIANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNI+ANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

12) C694_02790 in NC_018939


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  555 bits (2097),  Expect = 9e-160, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNVQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFN QGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALXTNALTSGTNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQAL TNALTSG+NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKNKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIK+KLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

13) HP0541 in NC_000915


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  555 bits (2097),  Expect = 9e-160, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNVQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFN QGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALXTNALTSGTNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQAL TNALTSG+NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKNKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIK+KLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

14) C695_02790 in NC_018937


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  555 bits (2097),  Expect = 9e-160, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNVQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFN QGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALXTNALTSGTNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQAL TNALTSG+NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKNKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIK+KLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

15) C730_02790 in NC_018938


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  555 bits (2097),  Expect = 9e-160, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNVQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFN QGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALXTNALTSGTNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQAL TNALTSG+NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKNKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIK+KLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

16) cagH in NC_020508


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  554 bits (2092),  Expect = 2e-159, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 367/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYVK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVY K
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

17) HPKB_0802 in NC_017354


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  554 bits (2092),  Expect = 2e-159, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQNNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQ NTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEIMSGILGNITSATPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVE+MSGILGNITSA+PKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

18) K750_04070 in NC_021217


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  554 bits (2091),  Expect = 3e-159, Method: Compositional matrix adjust.
 Identities = 364/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMTAAIIPIIVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAM+AAIIPI+VGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEIMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVE+MSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALAANALTSGVNPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALA+NALTSG NPMTTPACPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

19) HPGAM_02755 in NC_017371


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  553 bits (2089),  Expect = 3e-159, Method: Compositional matrix adjust.
 Identities = 362/370 (98%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLsqvssiisstsGVAGPFAGIVAGAMTAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLS++SSIISSTSGVAGPFAGIVAGAM+AAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSVPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGSTQGA  120
            MTQYNQSIAEAVS+PMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQG+TQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILGQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMIL QSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

20) HMPREF0462_0876 in NC_017375


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  553 bits (2088),  Expect = 4e-159, Method: Compositional matrix adjust.
 Identities = 365/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALAANALTSGVNPMTTPACSIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALA+NALTSG NPMTTPAC+IGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

21) cagH in NC_017365


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  553 bits (2087),  Expect = 6e-159, Method: Compositional matrix adjust.
 Identities = 366/370 (99%), Positives = 367/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVETMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVE MSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

22) HPIN_04180 in NC_017372


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  553 bits (2086),  Expect = 6e-159, Method: Compositional matrix adjust.
 Identities = 363/370 (99%), Positives = 367/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEIMSGILGNITSAAPKYT  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVE+MSGILGNITSAAPKY+
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALAANALTSGVNPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALA+NALTSG NPMTTPACPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILGQSGLATSTYDTQAISNISSLYNYNIIANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMIL QSGLATSTYDTQAISNISSLYNYNI+ANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

23) cagH in NC_000921


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  553 bits (2086),  Expect = 6e-159, Method: Compositional matrix adjust.
 Identities = 362/370 (98%), Positives = 369/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLsqvssiisstsGVAGPFAGIVAGAMTAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLS++SSIISSTSGVAGPFAGIVAGAM+AAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSVPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQSA  120
            MTQYNQSIAEAVS+PMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQ+A
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQAVATKALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQA+AT+ALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

24) HMPREF4655_21061 in NC_017360


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  552 bits (2082),  Expect = 1e-158, Method: Compositional matrix adjust.
 Identities = 362/370 (98%), Positives = 366/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGV  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQG 
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSSILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMS+ILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALVANALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQAL +NALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYVKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDY+KDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

25) K747_06775 in NC_021215


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  552 bits (2084),  Expect = 9e-159, Method: Compositional matrix adjust.
 Identities = 365/370 (99%), Positives = 366/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALAANALTLGVNPMTTPVCPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALA+NALT G NPMTTP CPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

26) K748_08015 in NC_021882


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  552 bits (2084),  Expect = 9e-159, Method: Compositional matrix adjust.
 Identities = 365/370 (99%), Positives = 366/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALAANALTLGVNPMTTPVCPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALA+NALT G NPMTTP CPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

27) K749_01410 in NC_021216


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  552 bits (2084),  Expect = 9e-159, Method: Compositional matrix adjust.
 Identities = 365/370 (99%), Positives = 366/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLseissiisstsGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALAANALTLGVNPMTTPVCPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALA+NALT G NPMTTP CPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

28) K751_03335 in NC_021218


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  550 bits (2077),  Expect = 3e-158, Method: Compositional matrix adjust.
 Identities = 364/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLsevssvisstsgvAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLSE+SS+ISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

29) HPPC18_02580 in NC_017742


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  548 bits (2068),  Expect = 2e-157, Method: Compositional matrix adjust.
 Identities = 361/370 (98%), Positives = 368/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLsqvssvisstsgvAGPFAGIVAGAMTAAIIPIVVGFTNPQMTAI  60
            MAGTQAIYESSSAGFLS++SS+ISSTSGVAGPFAGIVAGAM+AAIIPIVVGFTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLHSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPVSVSMPTVYAK  240
            LALQEQL+SQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTP+SVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILGQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMIL QSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

30) HPV225_0545 in NC_017355


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  547 bits (2063),  Expect = 4e-157, Method: Compositional matrix adjust.
 Identities = 359/370 (98%), Positives = 366/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLsqvssvisstsgvAGPFAGIVAGAMTAAIIPIVVAFTNPQMTAI  60
            MAGTQAIYESSSAGFLS++SS+ISSTSGVAGPFAGIVAGAM+AAIIPIVV+FTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYV  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKY 
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

31) HPPN120_02640 in NC_017378


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  546 bits (2062),  Expect = 5e-157, Method: Compositional matrix adjust.
 Identities = 358/370 (97%), Positives = 367/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLsqvssvisstsgvAGPFAGIVAGAMTAAIIPIVVAFTNPQMTAI  60
            MAGTQAIYESSSAGFLS++SS+ISSTSGVAGPFAGIVAGAM+AAIIPIVV+FTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSAILGNITSAAPKYA  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMS+ILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALAANALTSGVNPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALA+NALTSG NPMTTPACPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

32) HPPN135_02670 in NC_017379


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  546 bits (2060),  Expect = 7e-157, Method: Compositional matrix adjust.
 Identities = 357/370 (97%), Positives = 367/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLsqvssvisstsgvAGPFAGIVAGAMTAAIIPIVVAFTNPQMTAI  60
            MAGTQAIYESSSAGFLS++SS+ISSTSGVAGPFAGIVAGAM+AAIIPIVV+FTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQITVPSVPTTVEMMSAILGNITSAAPKYA  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQI+VPSVPTTVEMMS+ILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALAANALTSGVNPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALA+NALTSG NPMTTPACPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

33) HPSH112_04330 in NC_017741


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  532 bits (2006),  Expect = 1e-152, Method: Compositional matrix adjust.
 Identities = 356/370 (97%), Positives = 366/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYEsssasflsqvssvisstsgvAGPFAGIVAGAMTAAIIPIVVAFTNPQMTAI  60
            MAGTQAIYESSSA+FLS++SS+ISSTSGVAGPFAGIVAGAM+AAIIPIVV+FTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSATPKYA  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSA+PKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALAANALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALA+NALTSG NPMTTPACP GDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

34) HPSH169_02780 in NC_017740


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  519 bits (1958),  Expect = 8e-149, Method: Compositional matrix adjust.
 Identities = 359/370 (98%), Positives = 365/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLsqissiisstsGVAGPFagivaaamtaaiiptvvaFTNPQMTAI  60
            MAGTQAIYESSSAGFLS+ISSIISSTSGVAGPFAGIVA+AM+AAIIP VV+FTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACP GDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

35) HPSH417_02585 in NC_017739


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  519 bits (1958),  Expect = 8e-149, Method: Compositional matrix adjust.
 Identities = 359/370 (98%), Positives = 365/370 (99%), Gaps = 0/370 (0%)

Query  1    MAGTQAIYESSSAGFLsqissiisstsGVAGPFagivaaamtaaiiptvvaFTNPQMTAI  60
            MAGTQAIYESSSAGFLS+ISSIISSTSGVAGPFAGIVA+AM+AAIIP VV+FTNPQMTAI
Sbjct  1    MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI  60

Query  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  121  QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  240
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  241  YQALATNALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300
            YQALATNALTSG NPMTTPACP GDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  361  ERVQTKIIVK  370
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

36) cagH in NC_020509


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  516 bits (1948),  Expect = 4e-148, Method: Compositional matrix adjust.
 Identities = 325/330 (99%), Positives = 328/330 (99%), Gaps = 0/330 (0%)

Query  1    MSAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNN  60
            MSAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNN
Sbjct  41   MSAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNN  100

Query  61   ILNISKLTGEFNAQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT  120
            ILNISKLTGEFNAQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT
Sbjct  101  ILNISKLTGEFNAQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT  160

Query  121  TVEMMSGILGNITSAAPKYTLALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFF  180
            TVEMMSGILGNITSAAPKY+LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFF
Sbjct  161  TVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFF  220

Query  181  SCMQISMTPMSVSMPTVYAKYQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEI  240
            SCMQISMTPMSVSMPTVYAKYQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEI
Sbjct  221  SCMQISMTPMSVSMPTVYAKYQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEI  280

Query  241  LREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSH  300
            LREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSH
Sbjct  281  LREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSH  340

Query  301  LTYLDYIKDKLKGQKDSYLTERVQTKVIVK  330
            LTYLDYIKDKLKGQKDSYLTERVQTK+IVK
Sbjct  341  LTYLDYIKDKLKGQKDSYLTERVQTKIIVK  370

37) hp2018_0524 in NC_017381


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  515 bits (1943),  Expect = 1e-147, Method: Compositional matrix adjust.
 Identities = 324/330 (99%), Positives = 328/330 (99%), Gaps = 0/330 (0%)

Query  1    MTAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSVPMKAANQQYNQLYQGFNDQSMAVGNN  60
            M+AAIIPIVVGFTNPQMTAIMTQYNQSIAEAVS+PMKAANQQYNQLYQGFNDQSMAVGNN
Sbjct  41   MSAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNN  100

Query  61   ILNISKLTGEFNAQGNTQSAQIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT  120
            ILNISKLTGEFNAQGNTQ+AQI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT
Sbjct  101  ILNISKLTGEFNAQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT  160

Query  121  TVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFF  180
            TVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFF
Sbjct  161  TVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFF  220

Query  181  SCMQISMTPMSVSMPTVYAKYQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEI  240
            SCMQISMTPMSVSMPTVYAKYQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEI
Sbjct  221  SCMQISMTPMSVSMPTVYAKYQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEI  280

Query  241  LREYYIEFVKNNTNLLQNASQMILGQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSH  300
            LREYYIEFVKNNTNLLQNASQMIL QSGLATSTYDTQAISNISSLYNYNIVANKSFLKSH
Sbjct  281  LREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSH  340

Query  301  LTYLDYIKDKLKGQKDSYLTERVQTKIIVK  330
            LTYLDYIKDKLKGQKDSYLTERVQTKIIVK
Sbjct  341  LTYLDYIKDKLKGQKDSYLTERVQTKIIVK  370

38) HPCU_02960 in NC_017358


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  510 bits (1922),  Expect = 5e-146, Method: Compositional matrix adjust.
 Identities = 321/330 (98%), Positives = 325/330 (99%), Gaps = 0/330 (0%)

Query  1    MTAAIIPIVVAFTNPQMTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNN  60
            M+AAIIPIVV+FTNPQMTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNN
Sbjct  41   MSAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNN  100

Query  61   ILNISKLTGEFNAQGNTQGAQIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT  120
            ILNISKLTGEFNAQGNTQGAQI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT
Sbjct  101  ILNISKLTGEFNAQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT  160

Query  121  TVEMMSGILGNITSAVPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFF  180
            TVEMMSGILGNITSA PKYALALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFF
Sbjct  161  TVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFF  220

Query  181  SCMQISMTPMSVSMPTVYAKYQALATNALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEI  240
            SCMQISMTPMSVSMPTVYAKYQALATNALTSG NPMTTPACP GDKVL VYCYAEKVAEI
Sbjct  221  SCMQISMTPMSVSMPTVYAKYQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEI  280

Query  241  LREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSH  300
            LREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSH
Sbjct  281  LREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSH  340

Query  301  LTYLDYIKDKLKGQKDSYLTERVQTKIIVK  330
            LTYLDYIKDKLKGQKDSYLTERVQTKIIVK
Sbjct  341  LTYLDYIKDKLKGQKDSYLTERVQTKIIVK  370

39) hp908_0543 in NC_017357


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  489 bits (1845),  Expect = 6e-140, Method: Compositional matrix adjust.
 Identities = 309/314 (99%), Positives = 312/314 (99%), Gaps = 0/314 (0%)

Query  1    MTAIMTQYNQSIAEAVSVPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGN  60
            MTAIMTQYNQSIAEAVS+PMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGN
Sbjct  57   MTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGN  116

Query  61   TQSAQIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAA  120
            TQ+AQI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAA
Sbjct  117  TQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAA  176

Query  121  PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPT  180
            PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPT
Sbjct  177  PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPT  236

Query  181  VYAKYQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLL  240
            VYAKYQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLL
Sbjct  237  VYAKYQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLL  296

Query  241  QNASQMILGQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD  300
            QNASQMIL QSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD
Sbjct  297  QNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD  356

Query  301  SYLTERVQTKIIVK  314
            SYLTERVQTKIIVK
Sbjct  357  SYLTERVQTKIIVK  370

40) hp2017_0522 in NC_017374


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  489 bits (1842),  Expect = 9e-140, Method: Compositional matrix adjust.
 Identities = 308/314 (99%), Positives = 311/314 (99%), Gaps = 0/314 (0%)

Query  1    MTAIMTQYNQSIAEAVSVPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGN  60
            MTAIMTQYNQSIAEAVS+PMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGN
Sbjct  57   MTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGN  116

Query  61   TQSAQIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAA  120
            TQ+AQI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAA
Sbjct  117  TQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAA  176

Query  121  PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPT  180
            PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPT
Sbjct  177  PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPT  236

Query  181  VYAKYQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLL  240
            VYAKYQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLL
Sbjct  237  VYAKYQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLL  296

Query  241  QNASQMILGQSGLATSTYDTQAISNIRSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD  300
            QNASQMIL QSGLATSTYDTQAISNI SLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD
Sbjct  297  QNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD  356

Query  301  SYLTERVQTKIIVK  314
            SYLTERVQTKIIVK
Sbjct  357  SYLTERVQTKIIVK  370

41) cagH in NC_017926


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  488 bits (1839),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 310/314 (99%), Positives = 312/314 (99%), Gaps = 0/314 (0%)

Query  1    MTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSVAVGNNILNISKLTGEFNAQGN  60
            MTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQS+AVGNNILNISKLTGEFNAQGN
Sbjct  57   MTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGN  116

Query  61   TQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVETMSGILGNITSAA  120
            TQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVE MSGILGNITSAA
Sbjct  117  TQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAA  176

Query  121  PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPT  180
            PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPT
Sbjct  177  PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPT  236

Query  181  VYAKYQALATNALTSGVNPMTTSACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLL  240
            VYAKYQALATNALTSG NPMTT+ACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLL
Sbjct  237  VYAKYQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLL  296

Query  241  QNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD  300
            QNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD
Sbjct  297  QNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD  356

Query  301  SYLTERVQTKIIVK  314
            SYLTERVQTKIIVK
Sbjct  357  SYLTERVQTKIIVK  370

42) cagH in NC_011333


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  487 bits (1838),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 308/310 (99%), Positives = 309/310 (99%), Gaps = 0/310 (0%)

Query  1    MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  60
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  61   QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  120
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  121  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  180
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  181  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  240
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  241  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  300
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  301  ERVQTKIIVK  310
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

43) HPPC_02675 in NC_014555


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  486 bits (1834),  Expect = 4e-139, Method: Compositional matrix adjust.
 Identities = 307/314 (98%), Positives = 312/314 (99%), Gaps = 0/314 (0%)

Query  1    MTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGN  60
            MTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGN
Sbjct  57   MTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGN  116

Query  61   TQGAQIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSAILGNITSAA  120
            TQGAQI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMS+ILGNITSAA
Sbjct  117  TQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAA  176

Query  121  PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPT  180
            PKYALALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPT
Sbjct  177  PKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPT  236

Query  181  VYAKYQALAANALTSGTNPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLL  240
            VYAKYQALA+NALTSG+NPMTTPACPIGDKVL VYCYAEKVAEILREYYIEFVKNNTNLL
Sbjct  237  VYAKYQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLL  296

Query  241  QNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD  300
            QNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD
Sbjct  297  QNASQMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKD  356

Query  301  SYLTERVQTKIIVK  314
            SYLTERVQTKIIVK
Sbjct  357  SYLTERVQTKIIVK  370

44) HPSJM_02590 in NC_014560


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  484 bits (1825),  Expect = 2e-138, Method: Compositional matrix adjust.
 Identities = 306/310 (99%), Positives = 309/310 (99%), Gaps = 0/310 (0%)

Query  1    MTQYNQSIAEAVSVPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  60
            MTQYNQSIAEAVS+PMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  61   QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMISGILGNITSAAPKYA  120
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEM+SGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  121  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  180
            LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  181  YQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  240
            YQALATNALTSG NPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  241  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  300
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  301  ERVQTKIIVK  310
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370

45) HPSH_04185 in NC_010698


> AY330637|14|G14|37811800|AAR03875.1|Helicobacter_pylori_Ca52|-|14758..15870|cag20|HP0541|Cag20
Length=370

 Score =  479 bits (1806),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 302/310 (98%), Positives = 305/310 (99%), Gaps = 0/310 (0%)

Query  1    MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  60
            MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
Sbjct  61   MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA  120

Query  61   QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  120
            QI+AVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
Sbjct  121  QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA  180

Query  121  LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK  180
            LALQEQLRSQASNSSMNDTADSLDSCTALGAL +SSKVFFSCMQISMTPMSVSMPTVYAK
Sbjct  181  LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK  240

Query  181  YQALVANALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  240
            YQAL +NALTSG NPMTTPACP GDKVL VYCYAEKVAEILREYYIEFVKNNTNLLQNAS
Sbjct  241  YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS  300

Query  241  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  300
            QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
Sbjct  301  QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT  360

Query  301  ERVQTKIIVK  310
            ERVQTKIIVK
Sbjct  361  ERVQTKIIVK  370