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Homologs of tviC gene of NC_003198_P9

181

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) tviC
( NP_458739.1 )

Vi polysaccharide biosynthesis protein, epimerase

NC_003198
(Salmonella enterica CT18)

6e-154

100

2) STBHUCCB_46070
( YP_005220023.1 )

Vi polysaccharide biosynthesis protein vipB/tviC

NC_016832
(Salmonella enterica P-stx-12)

6e-154

100

3) tviC
( YP_002639959.1 )

Vi polysaccharide biosynthesis protein, epimerase

NC_012125
(Salmonella enterica RKS4594)

6e-154

100

4) tviC
( NP_807944.1 )

VI polysaccharide biosynthesis epimerase

NC_004631
(Salmonella enterica Ty2)

6e-154

100

5) TY21A_22160
( YP_007928592.1 )

Vi polysaccharide biosynthesis protein, epimerase

NC_021176
(Salmonella enterica Ty21a)

6e-154

100

6) PsycPRwf_0248
( YP_001279153.1 )

NAD-dependent epimerase/dehydratase

NC_009524
(Psychrobacter sp. PRwf-1)

9e-119

7) Tmz1t_3795
( YP_002890761.1 )

NAD-dependent epimerase/dehydratase

NC_011662
(Thauera sp. MZ1T)

3e-114

8) AB57_0095
( YP_002317509.1 )

VI polysaccharide biosynthesis protein VipB/tviC

NC_011586
(Acinetobacter baumannii AB0057)

1e-113

9) PLES_19101
( YP_002439514.1 )

wbpP

NC_011770
(Pseudomonas aeruginosa LESB58)

3e-113

10) PAM18_1814
( YP_005974402.1 )

wbpP

NC_017548
(Pseudomonas aeruginosa M18)

3e-113

11) H045_04680
( YP_007396508.1 )

WbpP

NC_020209
(Pseudomonas poae RE*1-1-14)

3e-113

12) wbpP
( YP_160367.1 )

WbpP

NC_006513
(Aromatoleum aromaticum EbN1)

6e-111

13) Swoo_1655
( YP_001760036.1 )

NAD-dependent epimerase/dehydratase

NC_010506
(Shewanella woodyi ATCC 51908)

8e-111

14) ABBFA_003457
( YP_002327329.1 )

Vi polysaccharide biosynthesis protein vipB/tviC

NC_011595
(Acinetobacter baumannii AB307-0294)

3e-110

15) ABAYE3814
( YP_001715531.1 )

NAD-dependent epimerase/dehydratase (WbpP)

NC_010410
(Acinetobacter baumannii AYE)

3e-110

16) ACIAD0088
( YP_044889.1 )

NAD-dependent epimerase/dehydratase

NC_005966
(Acinetobacter sp. ADP1)

1e-109

17) galE
( YP_007594605.1 )

UDP-glucose 4-epimerase

NC_020547
(Acinetobacter baumannii D1279779)

2e-109

18) ABTJ_03760
( YP_006291603.1 )

nucleoside-diphosphate-sugar epimerase

NC_017847
(Acinetobacter baumannii MDR-TJ)

2e-109

19) swp_1576
( YP_002310946.1 )

UDP-GlcNAc C4 epimerase

NC_011566
(Shewanella piezotolerans WP3)

2e-109

20) galE
( YP_003777571.1 )

UDP-galactose-4-epimerase

NC_014323
(Herbaspirillum seropedicae SmR1)

2e-109

21) wbpP
( NP_718745.1 )

UDP-GlkcNAc C4 epimerase WbpP

NC_004347
(Shewanella oneidensis MR-1)

4e-109

22) DP0046
( YP_063782.1 )

lipopolysaccharide biosynthetic protein (WbpP)

NC_006138
(Desulfotalea psychrophila LSv54)

4e-109

23) UWK_01812
( YP_007468023.1 )

nucleoside-diphosphate-sugar epimerase

NC_020304
(Desulfocapsa sulfexigens DSM 10523)

1e-108

24) Tbd_0099
( YP_313857.1 )

NAD-dependent epimerase/dehydratase

NC_007404
(Thiobacillus denitrificans ATCC 25259)

5e-108

25) GM18_1432
( YP_004198176.1 )

NAD-dependent epimerase/dehydratase

NC_014973
(Geobacter sp. M18)

2e-107

26) HP15_p187g66
( YP_005887938.1 )

UDP-glucose 4-epimerase

NC_017507
(Marinobacter adhaerens HP15)

4e-107

27) wbgU
( YP_313478.1 )

putative UDP-glucose 4-epimerase

NC_007385
(Shigella sonnei Ss046)

2e-106

28) SCD_n01335
( YP_008546194.1 )

nucleoside-diphosphate-sugar epimerase

NC_022357
(Sulfuricella denitrificans skB26)

2e-106

29) Dde_0358
( YP_386854.1 )

UDP-glucose 4-epimerase

NC_007519
(Desulfovibrio alaskensis G20)

1e-105

30) Ddes_0109
( YP_002478707.1 )

NAD-dependent epimerase/dehydratase

NC_011883
(Desulfovibrio desulfuricans ATCC 27774)

1e-105

31) Despr_0720
( YP_004194186.1 )

NAD-dependent epimerase/dehydratase

NC_014972
(Desulfobulbus propionicus DSM 2032)

2e-105

32) wbpP
( YP_003043166.1 )

putative nad-dependent epimerase/dehydratase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-105

33) AXYL_05615
( YP_003981629.1 )

VI polysaccharide biosynthesis protein VipB/TviC

NC_014640
(Achromobacter xylosoxidans A8)

2e-104

34) BN112_2565
( YP_006968619.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_019382
(Bordetella bronchiseptica 253)

4e-104

35) galE
( YP_692629.1 )

4-epimerase

NC_008260
(Alcanivorax borkumensis SK2)

7e-104

36) CAP2UW1_3278
( YP_003168472.1 )

NAD-dependent epimerase/dehydratase

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

9e-104

37) wbpP
( YP_785045.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_010645
(Bordetella avium 197N)

1e-103

38) Ppro_2440
( YP_902103.1 )

NAD-dependent epimerase/dehydratase

NC_008609
(Pelobacter propionicus DSM 2379)

2e-103

39) vipB
( YP_001463384.1 )

VI polysaccharide biosynthesis protein vipB/tviC

NC_009801
(Escherichia coli E24377A)

2e-103

40) Alide_0759
( YP_004125412.1 )

NAD-dependent epimerase/dehydratase

NC_014910
(Alicycliphilus denitrificans BC)

3e-103

41) ispL
( YP_002603570.1 )

protein IspL

NC_012108
(Desulfobacterium autotrophicum HRM2)

3e-103

42) NH44784_029481
( YP_008030031.1 )

UDP-glucose 4-epimerase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

7e-103

43) Psyc_0651
( YP_263944.1 )

NAD-dependent epimerase

NC_007204
(Psychrobacter arcticus 273-4)

1e-102

44) Nmul_A0271
( YP_410971.1 )

NAD-dependent epimerase/dehydratase

NC_007614
(Nitrosospira multiformis ATCC 25196)

1e-102

45) wbpP
( YP_001632645.1 )

NDP-sugar epimerase

NC_010170
(Bordetella petrii DSM 12804)

1e-102

46) Dvul_2662
( YP_968101.1 )

NAD-dependent epimerase/dehydratase

NC_008751
(Desulfovibrio vulgaris DP4)

1e-102

47) DVU0319
( YP_009543.1 )

NAD-dependent epimerase/dehydratase

NC_002937
(Desulfovibrio vulgaris Hildenborough)

1e-102

48) Deval_0289
( YP_005701098.1 )

NAD-dependent epimerase/dehydratase

NC_017310
(Desulfovibrio vulgaris RCH1)

1e-102

49) TKWG_20440
( YP_006380819.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_017964
(Advenella kashmirensis WT001)

8e-102

50) Alide2_0710
( YP_004386642.1 )

UDP-glucose 4-epimerase

NC_015422
(Alicycliphilus denitrificans K601)

2e-101

51) PT7_2138
( YP_004417302.1 )

capsular polysaccharide biosynthesis protein

NC_015458
(Pusillimonas sp. T7-7)

2e-101

52) galE
( YP_003776141.1 )

UDP-glucose 4-epimerase

NC_014323
(Herbaspirillum seropedicae SmR1)

5e-101

53) PSYCG_03400
( YP_008162557.1 )

Vi polysaccharide biosynthesis protein vipB/tviC

NC_021661
(Psychrobacter sp. G)

7e-101

54) wbpP
( YP_006966808.1 )

capsular polysaccharide biosynthesis protein

NC_019382
(Bordetella bronchiseptica 253)

7e-101

55) wbpP
( NP_889460.1 )

capsular polysaccharide biosynthesis protein

NC_002927
(Bordetella bronchiseptica RB50)

7e-101

56) wbpP
( YP_006900457.1 )

capsular polysaccharide biosynthesis protein

NC_018829
(Bordetella bronchiseptica MO149)

9e-101

57) Dbac_1464
( YP_003157974.1 )

NAD-dependent epimerase/dehydratase

NC_013173
(Desulfomicrobium baculatum DSM 4028)

2e-100

58) Bpro_3996
( YP_550788.1 )

NAD-dependent epimerase/dehydratase

NC_007948
(Polaromonas sp. JS666)

3e-99

59) CPS_3643
( YP_270311.1 )

NAD-dependent epimerase/dehydratase

NC_003910
(Colwellia psychrerythraea 34H)

4e-99

60) Thivi_2177
( YP_006414252.1 )

nucleoside-diphosphate-sugar epimerase

NC_018012
(Thiocystis violascens DSM 198)

8e-99

61) BB0877
( NP_887426.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_002927
(Bordetella bronchiseptica RB50)

1e-98

62) BPP0792
( NP_883124.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_002928
(Bordetella parapertussis 12822)

1e-98

63) BN115_0846
( YP_006899091.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_018829
(Bordetella bronchiseptica MO149)

2e-98

64) wbpP
( NP_885146.1 )

capsular polysaccharide biosynthesis protein

NC_002928
(Bordetella parapertussis 12822)

2e-98

65) BN117_0823
( YP_006894841.1 )

capsular polysaccharide biosynthesis protein

NC_018828
(Bordetella parapertussis Bpp5)

2e-98

66) BN117_2658
( YP_006896512.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_018828
(Bordetella parapertussis Bpp5)

2e-98

67) wbpP
( YP_006626408.1 )

capsular polysaccharide biosynthesis protein

NC_018518
(Bordetella pertussis 18323)

2e-98

68) BN118_2814
( YP_006627322.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_018518
(Bordetella pertussis 18323)

2e-98

69) wbpP
( YP_005589754.1 )

capsular polysaccharide biosynthesis protein

NC_017223
(Bordetella pertussis CS)

2e-98

70) BPTD_3111
( YP_005591112.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_017223
(Bordetella pertussis CS)

2e-98

71) wbpP
( NP_880358.1 )

capsular polysaccharide biosynthesis protein

NC_002929
(Bordetella pertussis Tohama I)

2e-98

72) BP3149
( NP_881714.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_002929
(Bordetella pertussis Tohama I)

2e-98

73) vipB
( YP_003624137.1 )

Vi polysaccharide biosynthesis protein; putative UDP-glucose 4-epimerase

NC_014145
(Thiomonas sp. 3As)

1e-97

74) Lcho_3068
( YP_001792093.1 )

NAD-dependent epimerase/dehydratase

NC_010524
(Leptothrix cholodnii SP-6)

2e-97

75) DvMF_2280
( YP_002436690.1 )

NAD-dependent epimerase/dehydratase

NC_011769
(Desulfovibrio vulgaris Miyazaki F)

3e-97

76) Tint_1301
( YP_003643019.1 )

NAD-dependent epimerase/dehydratase

NC_014153
(Thiomonas intermedia K12)

3e-97

77) DGI_1709
( YP_008590696.1 )

putative UDP-glucose 4-epimerase

NC_022444
(Desulfovibrio gigas ATCC 19364)

2e-95

78) wbpP
( YP_007893943.1 )

NAD-dependent epimerase protein

NC_021149
(Azotobacter vinelandii CA)

3e-94

79) wbpP
( YP_007898992.1 )

NAD-dependent epimerase protein

NC_021150
(Azotobacter vinelandii CA6)

3e-94

80) wbpP
( YP_002800133.1 )

NAD-dependent epimerase protein

NC_012560
(Azotobacter vinelandii DJ)

3e-94

81) Hoch_5210
( YP_003269589.1 )

NAD-dependent epimerase/dehydratase

NC_013440
(Haliangium ochraceum DSM 14365)

3e-93

82) Sfum_3358
( YP_847466.1 )

NAD-dependent epimerase/dehydratase

NC_008554
(Syntrophobacter fumaroxidans MPOB)

3e-87

83) AnaeK_4420
( YP_002136752.1 )

NAD-dependent epimerase/dehydratase

NC_011145
(Anaeromyxobacter sp. K)

2e-85

84) FB2170_10016
( YP_003862880.1 )

NAD-dependent epimerase/dehydratase family protein

NC_014472
(Maribacter sp. HTCC2170)

5e-84

85) Celal_3144
( YP_004165916.1 )

UDP-glucose 4-epimerase

NC_014934
(Cellulophaga algicola DSM 14237)

2e-82

86) Trad_0292
( YP_003703975.1 )

NAD-dependent epimerase/dehydratase

NC_014221
(Truepera radiovictrix DSM 17093)

5e-82

87) ZPR_2256
( YP_003584776.1 )

VipB-like polysaccharide biosynthesis protein

NC_014041
(Zunongwangia profunda SMA-87)

1e-81

88) Swit_1202
( YP_001261706.1 )

NAD-dependent epimerase/dehydratase

NC_009511
(Sphingomonas wittichii RW1)

2e-81

89) GFO_2041
( YP_862073.1 )

VipB-like polysaccharide biosynthesis protein

NC_008571
(Gramella forsetii KT0803)

6e-81

90) KQS_03270
( YP_005356697.1 )

NAD-dependent epimerase/dehydratase family protein probably involved in polysaccharide biosynthesis

NC_017025
(Flavobacterium indicum GPTSA100-9)

1e-80

91) Celly_2640
( YP_004263328.1 )

UDP-glucose 4-epimerase

NC_015167
(Cellulophaga lytica DSM 7489)

1e-80

92) Fjoh_0359
( YP_001192714.1 )

NAD-dependent epimerase/dehydratase

NC_009441
(Flavobacterium johnsoniae UW101)

2e-79

93) Fleli_1429
( YP_006433649.1 )

nucleoside-diphosphate-sugar epimerase

NC_018018
(Flexibacter litoralis DSM 6794)

5e-79

94) wbpP
( YP_004738189.1 )

UDP-N-acetylglucosamine 4-epimerase

NC_015844
(Zobellia galactanivorans DsiJT)

1e-78

95) FIC_00329
( YP_003094858.1 )

UDP-glucose 4-epimerase

NC_013062
(Flavobacteriaceae bacterium 3519-10)

2e-76

96) Niako_5358
( YP_005010998.1 )

UDP-glucose 4-epimerase

NC_016609
(Niastella koreensis GR20-10)

3e-76

97) Krodi_2791
( YP_004432034.1 )

NAD-dependent epimerase/dehydratase

NC_015496
(Krokinobacter sp. 4H-3-7-5)

3e-76

98) CA2559_13088
( YP_003717359.1 )

NAD-dependent epimerase/dehydratase

NC_014230
(Croceibacter atlanticus HTCC2559)

4e-76

99) G148_0865
( YP_007355863.1 )

Nucleoside-diphosphate-sugar epimerase

NC_020125
(Riemerella anatipestifer RA-CH-2)

1e-75

100) BDI_0026
( YP_001301443.1 )

nucleoside-diphosphate-sugar epimerase

NC_009615
(Parabacteroides distasonis ATCC 8503)

3e-75

101) B739_1126
( YP_006723624.1 )

Nucleoside-diphosphate-sugar epimerase

NC_018609
(Riemerella anatipestifer RA-CH-1)

3e-75

102) RIA_1491
( YP_006017925.1 )

Nucleoside-diphosphate-sugar epimerase

NC_017569
(Riemerella anatipestifer RA-GD)

3e-75

103) FCOL_03635
( YP_004941360.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_016510
(Flavobacterium columnare ATCC 49512)

7e-75

104) FP1297
( YP_001296191.1 )

NAD-dependent epimerase/dehydratase family protein probably involved in polysaccharide biosynthesis

NC_009613
(Flavobacterium psychrophilum JIP02/86)

8e-75

105) wbpP
( YP_005034239.1 )

UDP-N-acetylglucosamine C4 epimerase

NC_016620
(Bacteriovorax marinus SJ)

3e-74

106) Riean_0758
( YP_004045428.1 )

naD-dependent epimerase/dehydratase

NC_014738
(Riemerella anatipestifer ATCC 11845)

2e-73

107) RA0C_0995
( YP_005394471.1 )

naD-dependent epimerase/dehydratase

NC_017045
(Riemerella anatipestifer ATCC 11845)

2e-73

108) Odosp_3554
( YP_004254685.1 )

UDP-glucose 4-epimerase

NC_015160
(Odoribacter splanchnicus DSM 220712)

4e-73

109) Weevi_0963
( YP_004238251.1 )

UDP-glucose 4-epimerase

NC_015144
(Weeksella virosa DSM 16922)

2e-72

110) wbpP
( YP_007378708.1 )

UDP-glucose 4-epimerase

NC_020156
(Nonlabens dokdonensis DSW-6)

3e-71

111) Lacal_1032
( YP_004579308.1 )

UDP-glucose 4-epimerase

NC_015638
(Lacinutrix sp. 5H-3-7-4)

5e-71

112) Cycma_3084
( YP_004775043.1 )

NAD-dependent epimerase/dehydratase

NC_015914
(Cyclobacterium marinum DSM 745)

1e-70

113) BSn5_04350
( YP_004204525.1 )

NAD dependent epimerase

NC_014976
(Bacillus subtilis BSn5)

2e-69

114) FBFL15_2484
( YP_004844726.1 )

NAD-dependent epimerase/dehydratase

NC_016001
(Flavobacterium branchiophilum FL-15)

4e-68

115) TREPR_0344
( YP_004532536.1 )

VI polysaccharide biosynthesis protein VipB/tviC

NC_015578
(Treponema primitia ZAS-2)

2e-67

116) Tlie_1573
( YP_004933392.1 )

NAD-dependent epimerase/dehydratase

NC_016148
(Thermovirga lienii DSM 17291)

7e-67

117) Oweho_3304
( YP_004990900.1 )

nucleoside-diphosphate-sugar epimerase

NC_016599
(Owenweeksia hongkongensis DSM 17368)

1e-66

118) P700755_003406
( YP_006868792.1 )

UDP-N-acetyl-D-glucosamine 4-epimerase

NC_018721
(Psychroflexus torquis ATCC 700755)

2e-66

119) Echvi_4409
( YP_007226603.1 )

nucleoside-diphosphate-sugar epimerase

NC_019904
(Echinicola vietnamensis DSM 17526)

1e-65

120) Aeqsu_2223
( YP_006418698.1 )

nucleoside-diphosphate-sugar epimerase

NC_018013
(Aequorivita sublithincola DSM 14238)

3e-64

121) CHY_1057
( YP_359903.1 )

hypothetical protein

NC_007503
(Carboxydothermus hydrogenoformans Z-2901)

4e-63

122) SpiBuddy_0264
( YP_004246296.1 )

dTDP-glucose 4,6-dehydratase

NC_015152
(Sphaerochaeta globosa Buddy)

1e-62

123) galE
( YP_005322224.1 )

NAD dependent epimerase

NC_016940
(Saprospira grandis Lewin)

3e-62

124) F92_03255
( YP_007008759.1 )

NAD dependent epimerase/dehydratase family protein

NC_019537
(Francisella tularensis F92)

5e-62

125) wbtF
( YP_001892094.1 )

NAD dependent epimerase

NC_010677
(Francisella tularensis FSC147)

5e-62

126) wbtF
( YP_007011586.1 )

NAD dependent epimerase

NC_019551
(Francisella tularensis FSC200)

5e-62

127) FTL_0597
( YP_513357.1 )

NAD dependent epimerase

NC_007880
(Francisella tularensis LVS)

5e-62

128) wbtF
( YP_001121465.1 )

NAD-dependent epimerase/dehydratase family protein

NC_009257
(Francisella tularensis WY96-3418)

5e-62

129) wbtF
( YP_001428063.2 )

NAD dependent epimerase/dehydratase family protein

NC_009749
(Francisella tularensis FTNF002-00)

6e-62

130) FTH_0597
( YP_763198.1 )

UDP-glucose 4-epimerase

NC_008369
(Francisella tularensis OSU18)

6e-62

131) ELI_2406
( YP_003960351.1 )

NAD dependent epimerase

NC_014624
(Eubacterium limosum KIST612)

1e-61

132) ELI_2698
( YP_003960642.1 )

NAD dependent epimerase

NC_014624
(Eubacterium limosum KIST612)

1e-61

133) wbtF
( YP_667528.1 )

NAD dependent epimerase

NC_008245
(Francisella tularensis FSC 198)

6e-62

134) NE061598_08150
( YP_005831581.1 )

NAD dependent epimerase

NC_017453
(Francisella tularensis NE061598)

6e-62

135) wbtF
( YP_170396.1 )

NAD dependent epimerase

NC_006570
(Francisella tularensis SCHU S4)

6e-62

136) wbtF
( YP_005318520.1 )

UDP-glucose 4-epimerase

NC_016937
(Francisella tularensis TI0902)

6e-62

137) wbtF
( YP_005306066.1 )

UDP-glucose 4-epimerase

NC_016933
(Francisella tularensis TIGB03)

6e-62

138) wbtF
( YP_899047.1 )

NAD dependent epimerase

NC_008601
(Francisella novicida U112)

9e-62

139) galE
( YP_677459.1 )

UDP-galactose-4-epimerase

NC_008255
(Cytophaga hutchinsonii ATCC 33406)

5e-60

140) Lacal_0128
( YP_004578409.1 )

UDP-glucose 4-epimerase

NC_015638
(Lacinutrix sp. 5H-3-7-4)

8e-60

141) AL1_18440
( YP_007816972.1 )

Nucleoside-diphosphate-sugar epimerases

NC_021030
(Alistipes shahii WAL 8301)

6e-59

142) ELI_4554
( YP_003962451.1 )

NAD dependent epimerase

NC_014624
(Eubacterium limosum KIST612)

9e-59

143) AciX9_0220
( YP_004216074.1 )

NAD-dependent epimerase/dehydratase

NC_015064
(Granulicella tundricola MP5ACTX9)

2e-58

144) AciX8_4729
( YP_005060028.1 )

UDP-glucose 4-epimerase

NC_016631
(Granulicella mallensis MP5ACTX8)

3e-56

145) CCALI_02167
( YP_008090074.1 )

Nucleoside-diphosphate-sugar epimerases

NC_021487
(Chthonomonas calidirosea T49)

5e-56

146) Terro_2836
( YP_006422407.1 )

nucleoside-diphosphate-sugar epimerase

NC_018014
(Terriglobus roseus DSM 18391)

3e-55

147) Terro_4284
( YP_006423816.1 )

nucleoside-diphosphate-sugar epimerase

NC_018014
(Terriglobus roseus DSM 18391)

8e-55

148) ACP_1490
( YP_002754576.1 )

exopolysaccharide biosynthesis protein

NC_012483
(Acidobacterium capsulatum ATCC 51196)

9e-55

149) Ftrac_1658
( YP_004053754.1 )

nad-dependent epimerase/dehydratase

NC_014759
(Marivirga tractuosa DSM 4126)

3e-54

150) AciPR4_0573
( YP_004181402.1 )

NAD-dependent epimerase/dehydratase

NC_014963
(Terriglobus saanensis SP1PR4)

2e-53

151) Fluta_2174
( YP_004344998.1 )

dTDP-glucose 4,6-dehydratase

NC_015321
(Fluviicola taffensis DSM 16823)

2e-53

152) Rcas_3084
( YP_001433156.1 )

NAD-dependent epimerase/dehydratase

NC_009767
(Roseiflexus castenholzii DSM 13941)

3e-52

153) CLOAM0691
( YP_001740781.1 )

UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) (GalE-like)

NC_020449
(Candidatus Cloacamonas acidaminovorans Evry)

1e-51

154) Memar_0700
( YP_001046615.1 )

NAD-dependent epimerase/dehydratase

NC_009051
(Methanoculleus marisnigri JR1)

8e-52

155) Mpal_2132
( YP_002467153.1 )

NAD-dependent epimerase/dehydratase

NC_011832
(Methanosphaerula palustris E1-9c)

1e-51

156) OB2082
( NP_693003.1 )

UDP-glucose 4-epimerase

NC_004193
(Oceanobacillus iheyensis HTE831)

1e-51

157) Acid345_3097
( YP_592172.1 )

NAD-dependent epimerase/dehydratase

NC_008009
(Candidatus Koribacter versatilis Ellin345)

8e-51

158) LFML04_0810
( YP_006766004.1 )

UDP-glucose 4-epimerase

NC_018649
(Leptospirillum ferriphilum ML-04)

1e-50

159) Thein_0015
( YP_004624865.1 )

NAD-dependent epimerase/dehydratase

NC_015681
(Thermodesulfatator indicus DSM 15286)

2e-50

160) WcaG
( YP_001211645.1 )

nucleoside-diphosphate-sugar epimerases

NC_009454
(Pelotomaculum thermopropionicum SI)

5e-50

161) galE-4
( YP_005380720.1 )

UDP-glucose 4-epimerase

NC_017034
(Methanocella conradii HZ254)

1e-49

162) Mbar_A0021
( YP_303593.1 )

UDP-glucose 4-epimerase

NC_007355
(Methanosarcina barkeri Fusaro)

8e-50

163) Sinac_3916
( YP_007203839.1 )

nucleoside-diphosphate-sugar epimerase

NC_019892
(Singulisphaera acidiphila DSM 18658)

4e-49

164) ABC0508
( YP_174009.1 )

UDP-glucose 4-epimerase

NC_006582
(Bacillus clausii KSM-K16)

6e-49

165) Haur_4278
( YP_001547038.1 )

NAD-dependent epimerase/dehydratase

NC_009972
(Herpetosiphon aurantiacus DSM 785)

9e-49

166) galE3
( YP_001614400.1 )

UDP-glucose 4-epimerase

NC_010162
(Sorangium cellulosum So ce 56)

2e-48

167) LFE_2227
( YP_005470030.1 )

UDP-glucose 4-epimerase

NC_017094
(Leptospirillum ferrooxidans C2-3)

2e-48

168) SCE1572_22620
( YP_008150932.1 )

Vi polysaccharide biosynthesis protein vipB/tviC

NC_021658
(Sorangium cellulosum So0157-2)

5e-48

169) Dtox_2855
( YP_003192243.1 )

NAD-dependent epimerase/dehydratase

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

2e-47

170) Plabr_4445
( YP_004272039.1 )

UDP-glucose 4-epimerase

NC_015174
(Planctomyces brasiliensis DSM 5305)

2e-47

171) AciPR4_0105
( YP_004180940.1 )

NAD-dependent epimerase/dehydratase

NC_014963
(Terriglobus saanensis SP1PR4)

5e-47

172) Mfer_0810
( YP_004004371.1 )

nad-dependent epimerase/dehydratase

NC_014658
(Methanothermus fervidus DSM 2088)

5e-47

173) RoseRS_2395
( YP_001276722.1 )

NAD-dependent epimerase/dehydratase

NC_009523
(Roseiflexus sp. RS-1)

2e-46

174) Desti_1226
( YP_006446203.1 )

nucleoside-diphosphate-sugar epimerase

NC_018025
(Desulfomonile tiedjei DSM 6799)

3e-46

175) Terro_1237
( YP_006420882.1 )

nucleoside-diphosphate-sugar epimerase

NC_018014
(Terriglobus roseus DSM 18391)

4e-45

176) Mthe_0136
( YP_842576.1 )

NAD-dependent epimerase/dehydratase

NC_008553
(Methanosaeta thermophila PT)

1e-44

177) gmd
( NP_279223.1 )

GDP-D-mannose dehydratase

NC_002607
(Halobacterium salinarum NRC-1)

2e-44

178) gmd
( YP_001688311.1 )

nucleoside-diphosphate-sugar epimerase ( dTDP-glucose 4,6-dehydratase)

NC_010364
(Halobacterium salinarum R1)

2e-44

179) Mpsy_0543
( YP_006922122.1 )

UDP-glucose 4-epimerase

NC_018876
(Methanolobus psychrophilus R15)

3e-44

180) AciX8_3528
( YP_005058853.1 )

UDP-glucose 4-epimerase

NC_016631
(Granulicella mallensis MP5ACTX8)

3e-41

181) Isop_3753
( YP_004169319.1 )

NAD-dependent epimerase/dehydratase

NC_014957
(Isosphaera pallida ATCC 43644)

2e-33

• Sequence Alignments

1) tviC in NC_012125


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  536 bits (2024),  Expect = 6e-154, Method: Compositional matrix adjust.
 Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%)

Query  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60
            MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120
            TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLTAARDAHVssftyaassstyGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180
            FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240
            RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300
            VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV  348
            DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV  348

2) tviC in NC_003198


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  536 bits (2024),  Expect = 6e-154, Method: Compositional matrix adjust.
 Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%)

Query  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60
            MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120
            TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLTAARDAHVssftyaassstyGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180
            FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240
            RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300
            VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV  348
            DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV  348

3) STBHUCCB_46070 in NC_016832


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  536 bits (2024),  Expect = 6e-154, Method: Compositional matrix adjust.
 Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%)

Query  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60
            MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120
            TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLTAARDAHVssftyaassstyGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180
            FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240
            RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300
            VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV  348
            DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV  348

4) TY21A_22160 in NC_021176


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  536 bits (2024),  Expect = 6e-154, Method: Compositional matrix adjust.
 Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%)

Query  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60
            MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120
            TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLTAARDAHVssftyaassstyGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180
            FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240
            RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300
            VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV  348
            DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV  348

5) tviC in NC_004631


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  536 bits (2024),  Expect = 6e-154, Method: Compositional matrix adjust.
 Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%)

Query  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60
            MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120
            TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLTAARDAHVssftyaassstyGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180
            FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240
            RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300
            VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV  348
            DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSSV  348

6) PsycPRwf_0248 in NC_009524


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  419 bits (1579),  Expect = 9e-119, Method: Compositional matrix adjust.
 Identities = 229/340 (68%), Positives = 287/340 (85%), Gaps = 1/340 (0%)

Query  1    MTQYQKIQQDLVAAPKTWLITGVAGFIGSNLLETLLKLNQTVVGLDNFATGYQKNLDEVQ  60
            MT Y+ ++  LV APK WLITGVAGFIGS LLE LL LNQTV+GLDNF+TGYQ NLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SLVSSEQWKRFSFIKGDIRNFVDCQKACTGVDYVLHQAALGSVPRSLADPITTNEVNISG  120
            + VS EQW RF FI+GDIR+F DCQKAC  VDYVLHQAALGSVPRSL DPI+TN  NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLTAARDAEVKSFTYAASSSTYGDHPGLPKVEDKIGKPLSPYAVTKYVNELYADVFA  180
            FLNMLTAARDA+V SFTYAASSSTYGDHP+LPK+E++IG+PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RSYGFKSVGLRYFNVFGRRQDPDGAYAAVVPKWTAAMIKNDTVFINGDGDTSRDFCYIEN  240
            RSY F+++GLRYFNVFGRRQ+P+GAY+AV+P+W  +++K++ ++INGDG TSRDFCYIEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQANILAATTQSNEATNQVYNVAVGDRTTLNELFNAIKSALAD-NGVSYEQEPTYRDFR  299
             +QAN+L+ATT+   + N+VYNVAVGDRT+LNEL+  I+ +L          EP Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  PGDVRHSQANVSKAKNLLGYEPKFNISQGIDEAMAWYVNN  339
             GDV+HSQA+++K K +L+YEP F+I +G+ +++ WY+++
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

7) Tmz1t_3795 in NC_011662


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  405 bits (1522),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 216/340 (64%), Positives = 282/340 (83%), Gaps = 1/340 (0%)

Query  1    MTPYQQLLQDLPRAPKTWLITGAAGFIGSNLLETLLTLDQTVVGLDNFATGHQRNLDEVR  60
            MT+Y++L   L  APK WLITG AGFIGS LLE LL L+QTV+GLDNF+TG Q+NLD+VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SVVTREQWARFAFLKGDIRELEDCRRACNGVDYVLHQAALGSVPRSLADPITSNATNIDG  120
            + V+ EQW+RF F++GDIR + DC++AC+ VDYVLHQAALGSVPRSL DPI++N++NIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDEGVKSFVYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFA  180
            FLNML AARD  V SF YAASSSTYGDHP+LPK+E+ IG+PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RSYGFTTIGLRYFNVFGRRQDPDGAYAAVIPKWTAALLKGDTVYINGDGETSRDFCYVAN  240
            RSY F +IGLRYFNVFGRRQ+P+GAY+AVIP+W  +LLK++ +YINGDG TSRDFCY+ N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  AVQANILAATTSNPEARNQVYNVAVGDRTTLNTLFLMLRNNL-LTHDVSPNVRPTYREFR  299
             +QAN+L+ATT++  ++N+VYNVAVGDRT+LN L+ ++R+ L L ++  +   P Y++FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDVRHSQAATEKAQSLLGYAPSHTLEQGIAEAVDWYLRR  339
             GDV+HSQA   K +++L+Y P   + +G+ +++ WY+ +
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

8) AB57_0095 in NC_011586


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  402 bits (1513),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 222/340 (66%), Positives = 285/340 (84%), Gaps = 1/340 (0%)

Query  1    MSQYQTICEQLKQQPKKWLITGVAGFIGSNLLETLLKLDQSVVGLDNFATGHQYNLEEVQ  60
            M+ Y+ +  +L   PK+WLITGVAGFIGS LLE LL L+Q+V+GLDNF+TG Q NL++V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   GLVTSEQWARFTFIQGDIRNLEECQKACAEVDYVLHQAALGSVPRSIADPITTNAANITG  120
              V+ EQW+RF FIQGDIR++ +CQKAC +VDYVLHQAALGSVPRS+ DPI+TN+ANI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAKVKSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNELYADVFA  180
            FLNML AARDA V SFTYAASSSTYGDHP LPK+EE IG PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYDFKCIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMIQDEDVFINGDGETSRDFCFIEN  240
            R+Y+F+ IGLRYFNVFG+RQ+PNGAY+AVIP+W  ++++DE ++INGDG TSRDFC+IEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQANILAATTTNEEAKNQVYNVAVGDRTTLNDLFNAIKNALSV-NEITYVKKPIYRDFR  299
             +QAN+L+ATT +  +KN+VYNVAVGDRT+LN+L+  I+++L++  +      PIY+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  KGDVRHSQASIEKIKNLLGYDAKYTINEGIDLAINWYSTK  339
             GDV+HSQA I KIK +L+Y++ + I+EG+  +++WY  K
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

9) PLES_19101 in NC_011770


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  401 bits (1510),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 226/338 (67%), Positives = 285/338 (85%), Gaps = 2/338 (0%)

Query  1    MSRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR  60
            M+ YEELR  L   PK WLITGVAGFIGS LLE LL L+Q V+GLDNF+TG Q+NLD+VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDG  120
            + VSE QWS F FIQGDIR++ DC++AC  VDYVLHQAALGSVPRS++DPI++N++NIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFS  180
            FLNML AARDA V SFTYAASSSTYGDHP+LPK+E+ IG+PLSPYAVTKYVNELYADVF+
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIEN  240
            R Y F++IGLRYFNVFGRRQ+PNGAY+AVIP+W  S+++++ +YINGDG TSRDFCYIEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQANLLAATA-GLDARNQVYNIAVGGRTSLNQLFFALRDGLAE-NGVSYHREPVYRDFR  298
             +QANLL+AT+ +L ++N+VYN+AVG+RTSLN+L++ +RDGL        + EP+Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  EGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYI  336
            +GDV+HS ADI+K   +L+Y P +D+  G+  ++ WYI
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

10) PAM18_1814 in NC_017548


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  401 bits (1510),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 226/338 (67%), Positives = 285/338 (85%), Gaps = 2/338 (0%)

Query  1    MSRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR  60
            M+ YEELR  L   PK WLITGVAGFIGS LLE LL L+Q V+GLDNF+TG Q+NLD+VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDG  120
            + VSE QWS F FIQGDIR++ DC++AC  VDYVLHQAALGSVPRS++DPI++N++NIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFS  180
            FLNML AARDA V SFTYAASSSTYGDHP+LPK+E+ IG+PLSPYAVTKYVNELYADVF+
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIEN  240
            R Y F++IGLRYFNVFGRRQ+PNGAY+AVIP+W  S+++++ +YINGDG TSRDFCYIEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQANLLAATA-GLDARNQVYNIAVGGRTSLNQLFFALRDGLAE-NGVSYHREPVYRDFR  298
             +QANLL+AT+ +L ++N+VYN+AVG+RTSLN+L++ +RDGL        + EP+Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  EGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYI  336
            +GDV+HS ADI+K   +L+Y P +D+  G+  ++ WYI
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

11) H045_04680 in NC_020209


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  401 bits (1510),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 226/339 (67%), Positives = 286/339 (85%), Gaps = 1/339 (0%)

Query  1    MSRYETLLETLKTSPKTWLITGVAGFIGSNLLETLLGLNQVVVGLDNFATGHQRNLDEVK  60
            M+ YE L   L  +PK WLITGVAGFIGS LLE LL LNQ V+GLDNF+TG Q+NLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   GTVAAQQWARFSFIEGDIKVLDDCQRACGGVDYVLHQAALGSVPRSLNDPIATNATNIDG  120
             +V+ +QW+RF FI+GDI+ + DCQ+AC  VDYVLHQAALGSVPRSL+DPIATN++NIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAQVKSFTYAASSSTYGDHPGLPKVEDVIGKPLSPYAVTKYVNELYADVFA  180
            FLNML AARDA+V SFTYAASSSTYGDHP+LPK+E+ IG+PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  KCYGFDTIGLRYFNVFGKRQDPEGAYAAVIPKWAASMINDEDVFINGDGQTSRDFCFIEN  240
            + Y F++IGLRYFNVFG+RQ+P+GAY+AVIP+W  S+++DE ++INGDG TSRDFC+IEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQANLLAATTTDSTSRNQVYNVAVSGRTDLNMLFTSLRDALAK-NGIKYDKPPVYRDFR  299
             +QANLL+ATT D +S+N+VYNVAV++RT LN L+  +RD+L      +    P+Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDVRHSQADISKIKNKLQYEPHFNIVEGVEKAMPWYVQ  338
             GDV+HSQADI+KIK  L YEP+F+I EG+ +++ WY++
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

12) VVMO6_02775 in NC_014965


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  393 bits (1477),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 218/339 (65%), Positives = 277/339 (82%), Gaps = 2/339 (0%)

Query  1    MTKYEKIQQDLVESPKTWLITGVAGFIGSNLLEKLLKLDQTVVGLDNFATGHQHNLDEVK  60
            MT YE ++  LV +PK WLITGVAGFIGS LLE LL L+QTV+GLDNF+TG QHNLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SLVTEAQWQRFTFIEGDIRNPETCVAAVQGVDYVLHQAALGSVPRSINDPITTNSANITG  120
            + V+E QW RF FI+GDIR+   C  A + VDYVLHQAALGSVPRS++DPI+TNSANI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAAKDQQVKSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNELYANVFA  180
            FLNML AA+D +V SFTYAASSSTYGDHP LPK+EE IG PLSPYAVTKYVNELYA+VFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYGFKSIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMIQGDVIYINGDGETSRDFCYIAN  240
            R+Y F++IGLRYFNVFG+RQ+PNGAY+AVIP+W  ++++++ IYINGDG TSRDFCYI N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQMNILAATAPE-EAKDKIYNVAVGDRTTLNDLFSAIKLALSN-NTVVVSQEPIYREFR  298
             +Q N+L+AT+ +  +K+K+YNVAVGDRT+LN+L+  I+ +L+         EPIY++FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  TGDVRHSQADVNKAKQYLGYAPSHRILDGINEAMPWYIS  337
             GDV+HSQAD+ K K +L+Y P   I +G+++++ WYI 
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

13) wbpP in NC_006513


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  393 bits (1480),  Expect = 6e-111, Method: Compositional matrix adjust.
 Identities = 219/339 (65%), Positives = 287/339 (85%), Gaps = 1/339 (0%)

Query  1    MIAYQALQSILRDAPKTWLVTGVAGFIGSNLLETLLKLDQRVVGLDNFATGHARNLDEVQ  60
            M AY+ L++ L  APK WL+TGVAGFIGS LLE LL L+Q V+GLDNF+TG  +NLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TLVTAEQWARFAFVRGDIRQLDDCRRACAGVDYVLHQAALGSVPRSLDDPITSNATNIDG  120
            T V+ EQW+RF F++GDIR++ DC++AC  VDYVLHQAALGSVPRSL DPI++N++NIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAEVKSFTYAASSSTYGDHPSLPKVEDLIGKPLSPYAVTKYVNELYADVFA  180
            FLNML AARDA+V SFTYAASSSTYGDHP LPK+E+ IG+PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RCYGFNTIGLRYFNVFGKRQDPNGAYAAVIPKWTTAMIQGEDVFINGDGETSRDFCFVDN  240
            R Y FN+IGLRYFNVFG+RQ+PNGAY+AVIP+W  +++++E ++INGDG TSRDFC+++N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  AVQANLLAATTVDDAARDQIYNVAVSGRTTLNELYGYLQEALGQNGVNYDRT-PKYRDFR  299
             +QANLL+ATT D A+++++YNVAV++RT+LNELY  ++++L     +  R+ P Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDVRHSQADIDKANRLLGYAPQFDIRSGIQAVMPWYIG  338
             GDV+HSQADI K + +L+Y P+FDI+ G++  + WYI+
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

14) Swoo_1655 in NC_010506


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  393 bits (1478),  Expect = 8e-111, Method: Compositional matrix adjust.
 Identities = 214/339 (64%), Positives = 281/339 (83%), Gaps = 2/339 (0%)

Query  1    MSRYEQIQQELIDSPKTWLVTGVAGFIGSNLLEKLLKLNQTVVGLDNFATGHQHNLDEVK  60
            M+ YE+++  L+ +PK WL+TGVAGFIGS LLE LL LNQTV+GLDNF+TG QHNLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SLVTEEQWERFTFIEGDIRDYSTCEESVKGVDYVLHQAALGSVPRSIADPITSNATNITG  120
            + V+EEQW RF FI+GDIR ++ C+ + K VDYVLHQAALGSVPRS+ DPI++N++NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLQVAKAAKVESFTYAASSSTYGDHPALPKVEDNIGNPLSPYAVTKYVNELYANVFA  180
            FLNML  A+ A V SFTYAASSSTYGDHP LPK+E+ IG PLSPYAVTKYVNELYA+VFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  KTYGFKTIGLRYFNVFGQRQDPNGAYAAVIPKWASAMIQGDEIFINGDGETSRDFCFIEN  240
            ++Y F++IGLRYFNVFG+RQ+PNGAY+AVIP+W  ++++++ I+INGDG TSRDFC+IEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQMNLLAATSEDIA-KDEVYNVAVGDRTTLNDLFTNIQSSLNK-SGSIYSIAPSYRAFR  298
             +Q NLL+AT++D+A K+ VYNVAVGDRT+LN+L+  I+ +LN          P Y+ FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  NGDVRHSQADISKAKQKLGYSPEFNISQGIAKAMPWYLG  337
            +GDV+HSQADI+K K  L+Y PEF+I +G+ +++ WY++
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

15) ABBFA_003457 in NC_011595


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  391 bits (1472),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 230/337 (69%), Positives = 279/337 (83%), Gaps = 2/337 (0%)

Query  1    MNRYEEVLEQLNSNPKTWLITGVAGFIGSNLLETLLKLNQNVIGLDNFATGHQYNLDEVE  60
            M  YEE+  +L   PK WLITGVAGFIGS LLE LL LNQ VIGLDNF+TG Q NLD+V 
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TLVSSDQWKNFTFYNGDIRNLEDCQKACANVDYVLHQAALGSVPRSIADPILTNSANITG  120
            T VS +QW  F F +GDIR++ DCQKAC NVDYVLHQAALGSVPRS+ DPI TNSANI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAQVKSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNELYAEVFA  180
            FLNML AARDA+V SFTYAASSSTYGDHP LPK+EE IG PLSPYAVTKYVNELYA+VFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYGFKAIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMIQGDDVFINGDGETSRDFCYIEN  240
            R+Y F+AIGLRYFNVFG+RQ+PNGAY+AVIP+W  ++++++ ++INGDG TSRDFCYIEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQANILAAVAND-EAKNQVYNVAVGDRTTLNDLFKAIKSALKE-NGISYDKEPVYREFR  298
             +QAN+L+A +ND  +KN+VYNVAVGDRT+LN+L+  I+ +L+         EP+Y++FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  AGDVRHSQADVTKIKTLLGYDPKFRIFEGISQAMVWY  335
             GDV+HSQAD+TKIKT+L+Y+P F I EG+ Q++ WY
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

16) ABAYE3814 in NC_010410


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  391 bits (1472),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 230/337 (69%), Positives = 279/337 (83%), Gaps = 2/337 (0%)

Query  1    MNRYEEVLEQLNSNPKTWLITGVAGFIGSNLLETLLKLNQNVIGLDNFATGHQYNLDEVE  60
            M  YEE+  +L   PK WLITGVAGFIGS LLE LL LNQ VIGLDNF+TG Q NLD+V 
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TLVSSDQWKNFTFYNGDIRNLEDCQKACANVDYVLHQAALGSVPRSIADPILTNSANITG  120
            T VS +QW  F F +GDIR++ DCQKAC NVDYVLHQAALGSVPRS+ DPI TNSANI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAQVKSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNELYAEVFA  180
            FLNML AARDA+V SFTYAASSSTYGDHP LPK+EE IG PLSPYAVTKYVNELYA+VFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYGFKAIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMIQGDDVFINGDGETSRDFCYIEN  240
            R+Y F+AIGLRYFNVFG+RQ+PNGAY+AVIP+W  ++++++ ++INGDG TSRDFCYIEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQANILAAVAND-EAKNQVYNVAVGDRTTLNDLFKAIKSALKE-NGISYDKEPVYREFR  298
             +QAN+L+A +ND  +KN+VYNVAVGDRT+LN+L+  I+ +L+         EP+Y++FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  AGDVRHSQADVTKIKTLLGYDPKFRIFEGISQAMVWY  335
             GDV+HSQAD+TKIKT+L+Y+P F I EG+ Q++ WY
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

17) ACIAD0088 in NC_005966


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  389 bits (1464),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 224/343 (66%), Positives = 283/343 (83%), Gaps = 1/343 (0%)

Query  1    MTAYQKQCITLQAAPKTWLITGVAGFIGSNLLETLLKLDQRVIGLDNFATGHQHNLDEVQ  60
            MTAY+     L  APK WLITGVAGFIGS LLE LL L+Q VIGLDNF+TG QHNLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   GLVSREQWNNFKFIRGDICQLQDCQAACEGVDYVLHQAALGSVPRSLVDPITTNSVNIGG  120
              VS EQW+ F FI+GDI ++ DCQ AC  VDYVLHQAALGSVPRSL DPI+TNS NI+G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAQVKSFTYAASSSTYGDHPALPKLEDHIGKPLSPYAVTKYVNELYADVFA  180
            FLNML AARDA+V SFTYAASSSTYGDHP LPK+E++IG+PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RSYGFYCIGLRYFNVFGQRQDPNGAYAAVIPKWTAAMIQGEDVFINGDGETSRDFCFIEN  240
            RSY F  IGLRYFNVFG+RQ+PNGAY+AVIP+W  +++++E ++INGDG TSRDFC+IEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQANLLAATTQDAAAKNQVYNVAVGDRTTLNQLFATLQSALAE-NGIHYNKPAVYREFR  299
             +QANLL+ATT+D A+KN+VYNVAVGDRT+LN+L+  ++ +L      +    ++Y++FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDVRHSQADIGKISQLLGYQPEYRFAQGVHKAMHWYVQDLTS  342
             GDV+HSQADI KI  +L+Y+PE+ + +G+ +++ WY++  ++
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHST  343

18) galE in NC_020547


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  389 bits (1462),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 219/339 (65%), Positives = 276/339 (82%), Gaps = 2/339 (0%)

Query  1    MNQYEQVLEQLKSNPKIWLITGVAGFIGSNLLETLLKLNQKVIGLDNFATGFQHNLNDVQ  60
            M  YE++  +L   PK WLITGVAGFIGS LLE LL LNQ VIGLDNF+TG+QHNL+DV+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SLVSEEQWENFTFFKGDIRNLEDCQKVCTGVDYVLHQAALGSVPRSIADPIMTNSANITG  120
            + VSEEQW  F F++GDIR++ DCQK C  VDYVLHQAALGSVPRS+ DPI TNSANI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAQVKSFTYAASSSTYGDHPALPKVEENIGQPLSPYAITKYVNELYANVFS  180
            FLNML AARDA+V SFTYAASSSTYGDHP LPK+EE IG+PLSPYA+TKYVNELYA+VF+
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  KTYNFHSIGLRYFNVFGKRQNPKGAYAAVIPTWTSLLLQKEQVFINGDGETSRDFCYIQN  240
            ++Y+F++IGLRYFNVFG+RQNP+GAY+AVIP W   LL+ E ++INGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  AVQANILAATAPNVQESA-VYNIAFGERISLNQLYQEISDNLRTLAKLE-KTQPHYRDFR  298
             +QAN+L+AT+ ++     VYN+A G+R SLN+LY  I D L    + + +++P Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  TGDVRHSLADITKAKEILHYQPRYSVRDGLKEAVSWYVA  337
             GDV+HS ADITK K +L Y+P + +++GLK+++ WY+ 
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

19) ABTJ_03760 in NC_017847


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  389 bits (1462),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 219/339 (65%), Positives = 276/339 (82%), Gaps = 2/339 (0%)

Query  1    MNQYEQVLEQLKSNPKIWLITGVAGFIGSNLLETLLKLNQKVIGLDNFATGFQHNLNDVQ  60
            M  YE++  +L   PK WLITGVAGFIGS LLE LL LNQ VIGLDNF+TG+QHNL+DV+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SLVSEEQWENFTFFKGDIRNLEDCQKVCTGVDYVLHQAALGSVPRSIADPIMTNSANITG  120
            + VSEEQW  F F++GDIR++ DCQK C  VDYVLHQAALGSVPRS+ DPI TNSANI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAQVKSFTYAASSSTYGDHPALPKVEENIGQPLSPYAITKYVNELYANVFS  180
            FLNML AARDA+V SFTYAASSSTYGDHP LPK+EE IG+PLSPYA+TKYVNELYA+VF+
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  KTYNFHSIGLRYFNVFGKRQNPKGAYAAVIPTWTSLLLQKEQVFINGDGETSRDFCYIQN  240
            ++Y+F++IGLRYFNVFG+RQNP+GAY+AVIP W   LL+ E ++INGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  AVQANILAATAPNVQESA-VYNIAFGERISLNQLYQEISDNLRTLAKLE-KTQPHYRDFR  298
             +QAN+L+AT+ ++     VYN+A G+R SLN+LY  I D L    + + +++P Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  TGDVRHSLADITKAKEILHYQPRYSVRDGLKEAVSWYVA  337
             GDV+HS ADITK K +L Y+P + +++GLK+++ WY+ 
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

20) swp_1576 in NC_011566


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  388 bits (1461),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 223/339 (66%), Positives = 280/339 (83%), Gaps = 2/339 (0%)

Query  17   MTKYQEVQTDLLAASKTWLVTGVAGFIGSNLLEKLLKLNQTVVGLDNFATGHQHNLDEVK  76
            MT Y+E++T L+ A+K WL+TGVAGFIGS LLE LL LNQTV+GLDNF+TG QHNLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  77   SLVTTEQWQRFMFIQGDIRNLDDCKKAVTGVDYVLHQAALGSVPRSINDPITTNEVNISG  136
            + V+ EQW RF+FIQGDIR++ DC+KA   VDYVLHQAALGSVPRS++DPI+TN  NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  137  FLNMLVASRDEQVKSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNELYAGVYA  196
            FLNML A+RD +V SFTYAASSSTYGDHP LPK+EE IG PLSPYAVTKYVNELYA+V+A
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  197  RTYGFKTIGLRYFNVFGQRQDPNGAYAAVIPKWTAAMIEGEDIFINGDGETSRDFCYIGN  256
            R+Y F++IGLRYFNVFG+RQ+PNGAY+AVIP+W  +++ +E I+INGDG TSRDFCYI N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  257  TVQMNILAATASS-ELKDKIYNVAVGDRTSLNQLVQAIKVEL-IKNGIEIKGNLIYRAFR  314
             +Q N+L+AT++    K+K+YNVAVGDRTSLN+L   I+  L +    + +++ IY+ FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  315  DGDVRHSQADINKACTNLGYEPKFDIFSGLNNVMSWYIN  353
            DGDV+HSQADI K  T L+YEP FDI  GL++ + WYI+
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

21) galE in NC_014323


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  388 bits (1460),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 220/346 (64%), Positives = 285/346 (83%), Gaps = 7/346 (2%)

Query  3    SAYETLQQELPLTPRTWLVTGVAGFIGSNLLETLLKLNQRVVGLDNFSTGFQHNLDEVKA  62
            +AYE L+  L L+P+ WL+TGVAGFIGS LLE LL LNQ V+GLDNFSTG+QHNLD+V++
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  63   LVTPEQWANFRFVEGDIRKLDDCRAAMHHEALGSNIVEYVLHQAALGSVPRSIEDPITTN  122
             V+ EQW+ F F++GDIRK+ DC+ A        + V+YVLHQAALGSVPRS+ DPI+TN
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKA-------CKNVDYVLHQAALGSVPRSLKDPIATN  114

Query  123  QNNIDGFLNMLVAARDARVKRFVYAASSSTYGDHPGLPKVEDRIGKPLSPYAVTKFVNEL  182
              NIDGFLNML AARDA+V  F YAASSSTYGDHP+LPK+E+RIG+PLSPYAVTK+VNEL
Sbjct  115  SANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNEL  174

Query  183  YADVFARTYGLQTIGLRYFNIFGRRQNPDGAYAAVIPKWIAAAIKGEQIYINGDGETSRD  242
            YADVFAR+Y +++IGLRYFN+FGRRQNP+GAY+AVIP+WI + +K+E IYINGDG TSRD
Sbjct  175  YADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRD  234

Query  243  FCYVDNAVQANLLAACTLQDEAANQVYNVAVGDRTTLKELYQFLRDNLSATFPHLRDAQP  302
            FCY++N +QANLL+A T +  + N+VYNVAVGDRT+L+ELY ++RD L+    +   A+P
Sbjct  235  FCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEP  294

Query  303  IFREFRAGDVRHSLADIGKGRRLLGYEPSHRIGRGLKESMNWYVQQ  348
            I+++FR GDV+HS ADI K + +L+YEP   I  GLK++++WY+++
Sbjct  295  IYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

22) wbpP in NC_004347


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  388 bits (1458),  Expect = 4e-109, Method: Compositional matrix adjust.
 Identities = 220/339 (65%), Positives = 280/339 (83%), Gaps = 2/339 (0%)

Query  1    MTRYEQIKQELLNSPKTWLITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQ  60
            MT YE+++  L+ +PK WLITGVAGFIGS LLE+LL LNQTVIGLDNF+TG QHNLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SLVTSEQWMRFSFINGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITG  120
            + V+ EQW RF FI+GDIR ++ C+   + VDYVLHQAALGSVPRS+ DPI+TN+ANI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLQAAKEAEVKSFTYAASSSTYGDHPALPKVEQNIGNPLSPYAVTKYVNELYASVYA  180
            FLNML AA++A+V SFTYAASSSTYGDHP LPK+E+ IG PLSPYAVTKYVNELYA V+A
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYGFETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDN  240
            R+Y F++IGLRYFNVFGRRQ+PNGAY+AVIP+W  S++K+E ++INGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VVQMNILAATAAS-EAKNEVYNVAVGDRTTLNDLYFAIKDSLNA-NGINVNQNPNYRDFR  298
            V+Q N+L+AT+    +KN VYNVAVGDRT+LN+LY+ I+D+LN     +   +P Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  AGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKE  337
             GDV+HSQAD++K  T L+Y+    I EG+ +++ WY +
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

23) DP0046 in NC_006138


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  387 bits (1457),  Expect = 4e-109, Method: Compositional matrix adjust.
 Identities = 215/343 (63%), Positives = 278/343 (82%), Gaps = 8/343 (2%)

Query  1    MTRYQEVQQELKDSPKTWLITGVAGFIGSNLLETLLGLGQKVVGLDNFVTGYQHNLDEVE  60
            MT Y+E++  L  +PK WLITGVAGFIGS LLE LL L Q V+GLDNF TGYQHNLD+V 
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   GAVTDAQWQNFRFIEGDICSLDACQEACQGVDYVLQQAALGSVPRSIVDPITTNNTNISG  120
             +V++ QW  F FI+GDI  +  CQ AC+ VDYVL+QAALGSVPRS+ DPI+TN++NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAEVKSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNELYASVFA  180
            FLNML AARDA+V SFTYAASSSTYGDHP LPK+EE IG PLSPYAVTKYVNELYA VFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYSFKTIGLRYFNILGKRQDPNGAYAAVIPLWTAAMINDETVFINGDGETSRDFCFIEN  240
            R+Y F++IGLRYFN++G+RQ+PNGAY+AVIP W  ++++DE ++INGDG TSRDFC+IEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  AVQANILAATATE-EARDNVYNVAVGDRTTLNELFNLIKHNL----ADHGIVYNLDPSYR  295
             +QAN+L+AT+ +  ++++VYNVAVGDRT+LNEL+ LI++ L     +++     +P Y+
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRA---EPIYK  297

Query  296  DFRAGDVRHSQADTTKIKRLLGYSPQYKIGAGIEKAMGWYVQS  338
            DFR GDV+HSQAD TKIK +L+Y P++ I  G+ +++ WY++ 
Sbjct  298  DFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

24) UWK_01812 in NC_020304


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  386 bits (1450),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 213/340 (63%), Positives = 277/340 (82%), Gaps = 0/340 (0%)

Query  1    MTHYETLQNHLTDKQYTWLITGVAGFIGSNLLETLLKLNQKVVGLDNFSTGFQHNFDEVQ  60
            MT YE L+  L      WLITGVAGFIGS LLE LL LNQ V+GLDNFSTG+QHN+D+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SLVSEKQWQQFTFIEGDIRSIDDCTHACSNVDYVLHQAALGSVPRSIEDPITTNENNISG  120
            + VSE QW +F FI+GDIR + DC  AC NVDYVLHQAALGSVPRS+ DPI+TN  NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAAKDANVQRFVYAASSSTYGDHPDLPKEEDKIGKPLSPYAVTKLVNELYSDVFA  180
            FLNML AA+DA+V  F YAASSSTYGDHPDLPK E++IG+PLSPYAVTK VNELY+DVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  KTYGFKTIGLRYFNIFGQRQDPNGAYAAVIPKWFAGLIKNETVFINGDGETSRDFCFIEN  240
            ++Y F++IGLRYFN+FG+RQ+PNGAY+AVIP+W+ +L+K+E ++INGDG TSRDFC+IEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  AVEANLLAATAKNEEASNQVYNVAFGERTTLNELFQLIKERVVATHESAMNAAPEYRDFR  300
             ++ANLL+AT+++  + N+VYNVA G+RT+LNEL+ LI++ +   ++    A P Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  AGDVRHSLADISKAKRLIGYKPSFSVQAGLDKAAQWYLQN  340
             GDV+HS ADI+K K +++Y P F ++ GL ++ +WY+++
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

25) Tbd_0099 in NC_007404


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  384 bits (1443),  Expect = 5e-108, Method: Compositional matrix adjust.
 Identities = 207/340 (61%), Positives = 273/340 (81%), Gaps = 0/340 (0%)

Query  1    MSAFDALKAELVAEPKTWLVTGAAGFIGSNLVEALLRLDQRVVGLDNFATGHEKNLAQVQ  60
            M+A++ L++ LV  PK WL+TG AGFIGS L+E LL L+Q V+GLDNF+TG + NL +V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   ASVGPARWANLSFKRGDIRDLITCHDACKGVDYVLHQAALGSVPRSIEDPISTHAANNTG  120
            +SV+  +W+ + F +GDIR +  C+ ACK VDYVLHQAALGSVPRS+ DPI+T++AN  G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDARVKRFVYAASSSTYGDHPALPKVEDIIGKPLSPYAVTKLVNELYADVFG  180
            FLNML AARDA+V  F YAASSSTYGDHP LPK+E+ IG+PLSPYAVTK VNELYADVF+
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RCYGMESIGLRYFNIFGRRQDPQGAYAAVIPKWVASMIHGEPVYINGDGETSRDFCYIDN  240
            R Y  ++IGLRYFN+FGRRQ+P+GAY+AVIP+W+ S++ +EP+YINGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VIQANLLAATSPHADAANQVYNIAVGDRTTLNELFEAIRSLLAPRFPHLADVKPVYRDFR  300
            VIQANLL+AT+ +  + N+VYN+AVGDRT+LNEL+  IR  L  +  + +   P+Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  SGDVRHSLADISKARTRLGYAPSHRIADGLAEAMDWYVQD  340
             GDV+HS ADI+K +T L+Y P   I +GL +++ WY++ 
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

26) GM18_1432 in NC_014973


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 210/339 (62%), Positives = 278/339 (83%), Gaps = 3/339 (0%)

Query  3    AAFEQMQRDLLEQPKAWLVTGAAGFIGSNLVEALLRLDQKVVGLDNFATGKRQNLEELRS  62
            +A+E+++  L+  PK WL+TG AGFIGS L+E LL L+Q V+GLDNF+TG ++NL+++R+
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  63   LCPPRKWENFAFIEGDLRDLDTCQKAASGIDYVLHQGALGSVPRSLADPVTSNAANVTGF  122
              +  +W  F FI+GD+R +  CQKA   +DYVLHQ+ALGSVPRSL DP+++N+AN+ GF
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  123  LNMLVAARDAGVKRFVYAASSSTYGDHPDLPKVEDRIGRPLSPYAVTKYVNELYADVFAR  182
            LNML AARDA V  F YAASSSTYGDHPDLPK+E+RIGRPLSPYAVTKYVNELYADVFAR
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  183  SYGIESIGLRYFNVFGRRQDPDGAYAAVIPKWVASMLRREQVFINGDGETSRDFCHVQNV  242
            SY +++IGLRYFNVFGRRQ+P+GAY+AVIP+W+ S+L+ E ++INGDG TSRDFC ++NV
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  243  VQANLLSATTGNPGAVNQVYNVAVGERTSLNQLFQLIRDFLQ---PEAASLTPAYREFRA  299
            +QANLLSATT + ++ N+VYNVAVG+RTSLN+L+ LIRD L+    E +   P Y++FR 
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRD  301

Query  300  GDVRHSLADISKAERLLGYQPTHRIKEGLGEAMQWYREN  338
            GDV+HS ADI+K   +L+Y+P   IKEGL ++++WY ++
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

27) HP15_p187g66 in NC_017507


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  381 bits (1432),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 221/338 (66%), Positives = 279/338 (83%), Gaps = 8/338 (2%)

Query  9    YPQLLDQLPSQPKTWLITGAAGFIGSNLLEHLLKLNQHVIALDNFATGHQSNLDEVRSLV  68
            Y +L  +L   PK WLITG AGFIGS LLE+LL LNQ VI+LDNF+TG Q NLD+VR+ V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  69   STEQWTRLQSIEGDIRNPEDCARACEGVDYVLHQAALGSVPRSLNDPITTNAANITGFLN  128
            S EQW+R+  I+GDIR+  DC +AC  VDYVLHQAALGSVPRSL+DPI+TN+ANI GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  129  MLVAARDAGVKSFTYAASSSTYGDHPALPKVEEKIGKPLSPYAVTKHVNELYAEVFARSY  188
            ML AARDA V SFTYAASSSTYGDHP LPK+EE+IG+PLSPYAVTK VNELYA+VFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  189  GFKAIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMVRGEDVFINGDGETSRDFCFIENAVQ  248
             F+AIGLRYFNVFG+RQ+PNGAY+AVIP+W  +++++E ++INGDG TSRDFC+IEN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  249  ANLLAATAED-SARNEVYNVAVGDRTTLNDLFAALKSAL----AENGVVYDKAPVYRDFR  303
            ANLL+AT++D +++N VYNVAVGDRT+LN+L+  ++ +L     E++      P+Y+DFR
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQS---RAEPIYKDFR  300

Query  304  PGDVRHSQADIGKASSRLGYNPEFRIVEGIAKAMPWYL  341
             GDV+HSQADI K  + L+Y+PEF I EG+ +++ WY+
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

28) wbgU in NC_007385


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  379 bits (1424),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 222/338 (66%), Positives = 282/338 (84%), Gaps = 2/338 (0%)

Query  5    MSRYEEITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVK  64
            M+ YEE+  +L+++PK WLITGVAGFIGS LLE LL LNQ VIGLDNFSTG Q NLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  65   TLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITG  124
            T VS EQWSRF FI+GDIR +T C++  K VD VLHQAALGSVPRS+ DPI+TN++NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  125  FLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYA  184
            FLN+L AA++A+V SFTYAASSSTYGDHP LPK+EE IG PLSPYAVTKYVNE+YA+V+A
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  185  RTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDN  244
            R+Y F++IGLRYFNVFGRRQ+PNGAY+AVIP+W  ++LK++ +YINGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  245  VIQMNILSALAKD-SAKDNIYNVAVGDRTTLNELSGYIYDELNL-IHHIDKLSIKYREFR  302
            VIQ N+LSA ++D ++K+++YNVAVGDRT+LNEL   I D LNL  ++  +    Y++FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  303  SGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYV  340
             GDV+HSQAD+TK   +L Y P++ I+EGL+ ++ WY+
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

29) SCD_n01335 in NC_022357


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  379 bits (1423),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 215/338 (64%), Positives = 272/338 (81%), Gaps = 0/338 (0%)

Query  1    MTKYHELKQHLQGNSHAWLITGVAGFIGSNLLETLLKLDQKVVGLDNFSTGHRHNLDQVE  60
            MT Y+EL+  L   +  WLITGVAGFIGS LLE LL L+Q V+GLDNFSTG +HNLD+V 
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   ARVTPTQWQSFRLIEGDIRNLADCTAACYGVDYVLHQAALGSVPRSLEDPILTNENNITG  120
            + V+  QW  F +I+GDIR+++DC  AC  VDYVLHQAALGSVPRSL DPI TN  NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAQVQRFVYAASSSTYGDHPGLPKVEDLIGKPLSPYAVTKYVNELYADVFA  180
            FLNML AARDA+V  F YAASSSTYGDHP+LPK+E+ IG+PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RCYGFKTVGLRYFNIFGQRQDPAGAYAAVIPKWVASMIKNESVFINGDGETSRDFCYIDN  240
            R Y F+++GLRYFN+FG+RQ+P GAY+AVIP+W+ S++K+E+++INGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQANLLAATTDNPDAVDQVYNVAVGDRTSLNQLFEGIRILLEPRFPHLKDFKPTYRDFR  300
             +QANLL+ATT++  + ++VYNVAVGDRTSLN+L+  IR  L+ +  +     P Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  AGDVRHSLADISKAQNLLGYAPTHRIDEGLKEAMDWYV  338
             GDV+HS ADI+K + +L+Y P   I EGLK+++ WY+
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

30) VEA_001772 in NC_013456


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  376 bits (1414),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 225/337 (67%), Positives = 280/337 (84%), Gaps = 2/337 (0%)

Query  1    MTKYEQIQQELVESPKTWLVTGVAGFIGSNLLEKLLKLDQTVVGLDNFATGHQHNLDEVK  60
            MT YE+++  LV +PK WL+TGVAGFIGS LLE LL L+QTV+GLDNF+TG QHNLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   GLVSEAQWDRFTLIEGDIREPKTCQQAVKGVDYVLHQAALGSVPRSIADPLTTNAANITG  120
              VSE QW RF +I+GDIR    CQ+A K VDYVLHQAALGSVPRS+ DP++TN+ANI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLDAAKEERVssftyaassstyGDHPALPKVEENIGNPLSPYAVTKYVNELYAGVYA  180
            FLNML AA++ +VSSFTYAASSSTYGDHP LPK+EE IG PLSPYAVTKYVNELYA+V+A
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMINGEDVYINGDGETSRDFCYIDN  240
            R+Y F++IGLRYFNVFGRRQ+PNGAY+AVIP+W  +++++E +YINGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VVQMNLLAATAKE-DAKDEVYNVAVGDRTTLNELYYAIKNALND-NGVLVDAEPKYRDFR  298
            V+Q NLL+AT+++  +K+ VYNVAVGDRT+LNELYY I+++LN        AEP Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  AGDVRHSQAEISKAKNKLDYLPEFKVLKGISVAMKWY  335
             GDV+HSQA+I+K K  L Y PEF +  G+  ++KWY
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

31) Dde_0358 in NC_007519


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  376 bits (1412),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 214/340 (63%), Positives = 269/340 (80%), Gaps = 0/340 (0%)

Query  1    MSRYTELLRQLQEAPRTWLITGVAGFIGSNLLETLLSHGQTVTGLDNFMTGHRKNLDMVR  60
            M+ Y EL  +L  AP+ WLITGVAGFIGS LLE LL   QTV GLDNF TG + NLD VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   DAVTPEQWSRFRFIEGDIRSLETCREACAGADYVLHQAALGSVPRSIDDPLLTNTCNIDG  120
             +V+ EQWSRF FI+GDIR +  C+ AC   DYVLHQAALGSVPRS+ DP+ TN+ NIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FVNMLVAARDADVRRFVYAASSSTYGDEPNLPKQEDRIGRPLSPYAVTKYVNELYADVFA  180
            F+NML AARDA+V  F YAASSSTYGD+P+LPK E+RIGRPLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYGMECTGLRYFNVFGKRQDPEGAYAAVIPLWFAGLLRDQPVFINGDGETSRDFCHIDN  240
            R+Y  +  GLRYFNVFG+RQ+P+GAY+AVIP W+ +LL+D+P++INGDG TSRDFC I+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQANLLAATAPDPEATNTVYNVAFGERTSLTELYGLIREEVARHNPHASEKEAQYRDFR  300
             +QANLL+AT+ D  + N VYNVA G+RTSL ELY LIR+ +     + S  E+ Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  AGDVRHSLADISRARTLLGYDPQISVRQGLRISGDWYAAN  340
             GDV+HS ADI++ +T+L+Y+P++ +++GL+ +  WY  +
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

32) Ddes_0109 in NC_011883


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  376 bits (1413),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 210/340 (62%), Positives = 271/340 (80%), Gaps = 1/340 (0%)

Query  1    MSAYSQLCATMQASPSRWLITGVAGFIGSNLLERLLGLGQTVVGLDNFLTGYQKNLDMVR  60
            M+AY +L + +  +P RWLITGVAGFIGS LLE LL L QTV+GLDNF TGYQ NLD VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   DIVGPEAWSRFTFIEGDIRDVDTCRKACEGVQHVLHEAALGSVPRSIDDPLLSNSCNITG  120
              V+ E WSRF FI+GDIR    C+KAC  V+ VLH+AALGSVPRS+ DP+ +NS NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLHMLVAARDAGVKSFVYAASSSTYGDSPELPKVEDKIGRPLSPYAVTKYVDELYADVFT  180
            FL+ML AARDA V SF YAASSSTYGD P+LPK+E++IGRPLSPYAVTKYV+ELYADVF+
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RCYGFSSVGLRYFNVFGQRQDPYGAYAAVIPQWFASLIKGETVYVNGDGETSRDFCYIDN  240
            R Y F+++GLRYFNVFG+RQ+P GAY+AVIP+W+ SL+K+E +Y+NGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VVEANLLASFARG-EAANTVYNVAFGQRTTLNELFALIREEVARHKPEAAKADVEHRDFR  299
            V++ANLL++ + +  + N VYNVA G+RT+LNEL+ LIR+ +   + E ++A+   +DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDVRHSLADISRAETRLGYAPRFDVRQGLRLAGDWYAAN  339
             GDV+HS ADI++  T L+Y P FD+++GL+ +  WY  +
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

33) Despr_0720 in NC_014972


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  375 bits (1409),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 215/340 (64%), Positives = 277/340 (82%), Gaps = 1/340 (0%)

Query  1    MERYHERRQQLHQQPATWLVTGVAGFIGSNLLESLLVLGQRVVGLDNFATGFQHNLDEVR  60
            M  Y+E R +L   P  WL+TGVAGFIGS LLE LL L Q V+GLDNF+TG+QHNLD+VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TRVGAAAWQRFCFIEGDIRELAVCREACTGVDYVLHQAALGSVPRSIEDPITTNESNITG  120
            T V+   W RF FI+GDIR ++ C+ AC  VDYVLHQAALGSVPRS+ DPI+TN +NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FVNMLvaardarvrrmvyaaSSSTYGDHPDLPKVEERIGNPLSPYAVTKLVNELYADVFG  180
            F+NML AARDA+V    YAASSSTYGDHPDLPK+EERIG PLSPYAVTK VNELYADVF+
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RVYGFAPIGLRYFNIFGQRQDPDGAYAAVIPKWFAGLLKNEPIYINGDGETSRDFCFIDN  240
            R Y F +IGLRYFN+FG+RQ+P+GAY+AVIP+W+ +LLK+EPIYINGDG TSRDFC+I+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  CVQANILAATADDQAA-GQVYNVAFGERTTLNELFALIRERVTTRMPAAAQAEPVYRDFR  299
             +QAN+L+AT++D A+  +VYNVA G+RT+LNEL+ LIR+ +  +    ++AEP+Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDVRHSLADISKGARLIGYQPEYSVRTGLDKAADWYMER  339
             GDV+HS ADI+K   +++Y+PE+ ++ GL ++  WY+++
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

34) wbpP in NC_012962


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  375 bits (1411),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 206/339 (61%), Positives = 271/339 (80%), Gaps = 1/339 (0%)

Query  1    MISYEQLKIQLQQKPATWLITGVAGFIGSNLLETLLKLNQNVIGLDNFATGHKHNLEIIK  60
            M +YE+L+ +L   P  WLITGVAGFIGS LLE LL LNQ VIGLDNF+TG +HNL+ ++
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   NLITPEQWQKFHFIEGDIRNLDDCQKASVGVDYILHQAALGSVPRSIEDPITSNATNISG  120
              ++ EQW +F FI+GDIR++ DCQKA   VDY+LHQAALGSVPRS+ DPI++N++NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDARAKRFVYAASSSTYGDHPELPKIEERIGNPLSPYAVTKYANELYASVFA  180
            FLNML AARDA+   F YAASSSTYGDHP+LPKIEERIG PLSPYAVTKY NELYA VFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYNLQSIGLRYFNVFGPRQDPNGSYAAVIPKWTATMLAGEQIYINGDGKTSRDFCFVAN  240
            R+Y++++IGLRYFNVFG RQ+PNG+Y+AVIP+W  ++L +E IYINGDG TSRDFC++ N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  AVQANILAATTINHNAINQVYNVAISQQTTLNELFEMIKSELVANNFNDDNILPAIHRDF  300
             +QAN+L+ATT +  + N+VYNVA++++T+LNEL+ +I+  L     N+++   +I +DF
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWR-NEQSRAEPIYKDF  299

Query  301  RKGDVRHSLADINKASNLLGYKPTHTIRQGIKLATQWYL  339
            R GDV+HS ADI K   +L+Y P   I++G+K + +WY+
Sbjct  300  RDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

35) AXYL_05615 in NC_014640


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  372 bits (1398),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 206/336 (62%), Positives = 270/336 (81%), Gaps = 2/336 (0%)

Query  5    FETAKKELSSAPRKWLVTGCAGFIGSNLLETLLRLGQTVTGLDNFATGFQHNLDEVRDSV  64
            +E  +  L  AP++WL+TG AGFIGS LLE LL L QTV GLDNF+TG+QHNLD+VR SV
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLEACRRAVQGVEFVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR +  C++A + V++VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDEEVKSFVYAASSSTYGDHPALPKVEENIGKPLSPYAVTKYVNELYADVFARSY  184
            ML AARD +V SF YAASSSTYGDHP LPK+EE IG+PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFETVGLRYFNVFGKRQNPNGAYAAVIPKWTAAMIQNEDVTINGDGETSRDFCFVENAVQ  244
             F+++GLRYFNVFG+RQNPNGAY+AVIP+W  +++++E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  ANILAAMAAP-EGRNQVYNVAVSGRSTLNQLFGFLVQTLGT-QGVAYGKKPVYADFRAGD  302
            AN+L+A +    ++N+VYNVAV++R++LN+L+ ++ + L   +       P+Y DFR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADVSKAGRLLGYEPTHTVLQGLEVAMPWYTQ  338
            V+HSQAD++K   +L+YEP   + +GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

36) BN112_2565 in NC_019382


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  371 bits (1393),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 210/336 (63%), Positives = 269/336 (81%), Gaps = 2/336 (0%)

Query  5    FETTCAQLRAQPRKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLATCQRAVQGVERVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + V+ VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEDRIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+E+RIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVENAVQ  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  ANLLAAMAGPQGS-NQVYNVAYNARTTLTELFEHLRRTLAG-QGVSYEKAPVYADFRAGD  302
            ANLL+A +   +S N+VYNVA   RT+L EL+  +R  L   +       P+Y DFR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQ  338
            V+HSQADI K   +L+YEP +DI  GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

37) galE in NC_008260


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  370 bits (1391),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 216/336 (65%), Positives = 285/336 (85%), Gaps = 2/336 (0%)

Query  3    TRYEQVQQDLKANPKTWLVTGVAGFIGSNLLETLLGLNQTVIGLDNFATGHQHNLDEVQQ  62
            T YE+++  L   PK WL+TGVAGFIGS LLE LL LNQTVIGLDNF+TG QHNLD+V+ 
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  63   TVTADQWANFTFIEGDIRSLDDCKKAVTGVDYVLHQAALGSVPRSIEDPITTNQANIDGF  122
            +V+ +QW+ F FI+GDIR + DC+KA   VDYVLHQAALGSVPRS+ DPI+TN ANIDGF
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  123  LNMLVAAKDENVasftyaassstyGDHPGLPKVEDKIGKPLSPYAVTKYVNELYADVFAR  182
            LNML AA+D +V+SFTYAASSSTYGDHP+LPK+E++IG+PLSPYAVTKYVNELYADVFAR
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  183  TYDFNTIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMIQGEDVFINGDGETSRDFCFIENV  242
            +Y+FN+IGLRYFNVFG+RQ+PNGAY+AVIP+W  +++++E ++INGDG TSRDFC+IENV
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  243  VQINLLAATAEA-EAKNQVFNVALGDRTTLNTLFDALKTALKE-CGVNYESDPVYRDFRA  300
            +Q NLL+AT++   +KN+V+NVA+GDRT+LN L+  ++ +L+     +  ++P+Y+DFR 
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRD  301

Query  301  GDVRHSQADISKAQELLGYEPAYRIYDGIGKAMPWY  336
            GDV+HSQADI+K + +L+YEP + I +G+ +++ WY
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

38) CAP2UW1_3278 in NC_013194


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  370 bits (1390),  Expect = 9e-104, Method: Compositional matrix adjust.
 Identities = 205/340 (61%), Positives = 271/340 (80%), Gaps = 0/340 (0%)

Query  8    LSPFAVLGKRLTAQPARWLVTGSAGFIGSHLVESLLRLDQTVVGLDNFATGHRRNLDEVR  67
            ++++  L  +L   P RWL+TG AGFIGS L+E LL L+QTV+GLDNF+TG ++NLD+VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  68   SLVTPAQWSRHRFVEADICDLDACREACRGIDFVLHQAALGSVPRSLANPVATNAANVDG  127
            + V+  QWSR  F+++DI  +  C+ AC+ +D+VLHQAALGSVPRSL +P+ATN+AN+DG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  128  FLNMLVAARDAGVRRFVYAASSSTYGDHEALPKIEERIGRPLSPYAVTKLVNELYAEVFA  187
            FLNML AARDA V  F YAASSSTYGDH  LPKIEERIGRPLSPYAVTK VNELYA+VFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  188  RCYGLAPIGLRYFNVFGARQDPEGAYAAVIPRWTRAMLLGEEVKINGDGETSRDFCFVDN  247
            R Y + +IGLRYFNVFG RQ+P+GAY+AVIPRW  ++L +E + INGDG TSRDFC+++N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  248  AVQANLLAATTDDPAAVNQVYNVAVDDRTSLNRLFDMLRDALSDFRPDVRSLRPVYGGFR  307
             +QANLL+ATT+D A+ N+VYNVAV+DRTSLN L+ ++RD+L+  R +     P+Y +FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  308  PGDVRHSQADIDKARRLLGYLPSHRLEDGVRVAMPWYVSR  347
             GDV+HSQADI K + +L+Y P   + +G++ ++ WY+ +
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

39) wbpP in NC_010645


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  369 bits (1387),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 207/338 (62%), Positives = 273/338 (81%), Gaps = 2/338 (0%)

Query  3    TRYDAVRADLQARPRKWLVTGCAGFIGSNLIETLLKLNQTVVGLDNFATGHQRNLDEVRG  62
            T Y+ +R+ L   P++WL+TG AGFIGS L+E LL LNQTV+GLDNF+TG Q+NLD+VR 
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  63   LVTAEQWARFTFIEGDIRDLDTCRRAADGVDKVLHQAALGSVPRSLNDPITTNAVNISGF  122
             V+ EQW+RF FI+GDIR +  C++A   VD VLHQAALGSVPRSL+DPI+TN+ NI GF
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  123  LNMLVAARDAKVGAFVYAASSSTYGDHPALPKVEENIGRPLSPYAVTKFVNELYADVFAR  182
            LNML AARDA V++F YAASSSTYGDHP LPK+EE IGRPLSPYAVTK+VNELYADVFAR
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  183  SYGFTTVGLRYFNVFGRRQDPNGAYAAVIPKWTAAMIQGETVVINGDGETSRDFCYVDNA  242
            SY F ++GLRYFNVFGRRQ+PNGAY+AVIP+W  +++++E + INGDG TSRDFCY++N 
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  243  VQANILGAMAGD-EARNQVYNVAYSGRTTLNQLFDFLKTSLG-RQGVAYDKQAEHADFRA  300
            +QAN+L+A + D  ++N+VYNVA ++RT+LN+L+ +++ +L  ++      ++   DFR 
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRD  301

Query  301  GDVRHSQADISKAGRLLGYQPAFDILQGLDAAMPWYTQ  338
            GDV+HSQADI+K   +L+Y+P FDI +GL  ++ WY +
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

40) Ppro_2440 in NC_008609


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  369 bits (1385),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 206/340 (61%), Positives = 265/340 (78%), Gaps = 0/340 (0%)

Query  1    MNRYDIVREQLKQNPRTWLVTGVAGFIGSNLLESLLTLGQRVVGLDNFSTGKRANLDEVS  60
            M  Y+ +R +L   P+ WL+TGVAGFIGS LLE LL L Q V+GLDNFSTG + NLD+V 
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   RVVTPRQWAAFTFHEGDIRELAACRAACQGVDYILHEAALGSVPRSIEDPISSNESNVGG  120
              V+  QW+ F F +GDIR ++ C+ AC+ VDY+LH+AALGSVPRS+ DPI++N +N++G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAKVRRMVYAASSSTYGDHPGLPKREELIGRPLSPYAVTKYVNELYADVFA  180
            FLNML AARDA V    YAASSSTYGDHP+LPK EE IGRPLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYAMELVGLRYFNVFGPRQDPEGAYAAVIPRWIRSMIIDETVYINGSGETSRDFCFVEN  240
            R+Y  + +GLRYFNVFG RQ+P+GAY+AVIPRWI S++ DE +YING G TSRDFC++EN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VIQMNLLAATADEPQAVNQVYNTAVNARTTLNELYDMLRQRLVPRFPHLAHRTPLHRDFR  300
            VIQ NLL+AT+++  + N+VYN AV  RT+LNELY ++R+ L  +  + ++  P+ +DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  AGDVLHSQADISKAARLLGYQPTHTIQSGLDASLSWYVDN  340
             GDV HSQADI+K   +L+Y+P   I+ GL  +L WY+D+
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

41) vipB in NC_009801


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  368 bits (1384),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 212/339 (63%), Positives = 272/339 (81%), Gaps = 2/339 (0%)

Query  1    MTRYEKTIEQLKVKPKTWLITGVAGFIGSNLLETLLRLNQTVVGLDNFATGHQRNLDEVQ  60
            MT YE    +L + PK WLITGVAGFIGS LLE LL LNQTV+GLDNF+TG Q+NLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   QNVTPEAWQKFTMIEGDIRDYETCMKAVDNVNYVLHQAALGSVPRSINDPITTNEVNVSG  120
             +V+ E W +F  I+GDIR +  C KA  NV+YVLHQAALGSVPRS++DPI+TN  N+ G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLQAAKCRDVESFVFAASSSTYGDHTALPKIEHTIGKPLSPYAITKYVNELYAEVFA  180
            FLNML AA+  +V SF +AASSSTYGDH  LPKIE+ IG+PLSPYA+TKYVNELYA+VFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  KMYGFKSIGLRYFNVFGKRQDPNGAYAAVIPKWISAMLMDKDIYINGDGETSRDFSFIEN  240
            + Y F++IGLRYFNVFG+RQ+PNGAY+AVIP+WI ++L D  IYINGDG TSRDF +IEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  TVQMNILAATADD-SAKGEVYNVAYGERTSLNELVEFIKNDLG-SNGIKYAGNIIYRDFR  298
             +Q N+L+AT++D ++K  VYNVA G+RTSLNEL  +I+++L      +  ++ IY+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  KGDVRHSLADISKAREMLGYQPQFDIKTGLRQAMPWYIN  337
             GDV+HS ADI+K +  L+Y+P+FDIK GL+Q++ WYI+
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

42) Alide_0759 in NC_014910


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  368 bits (1383),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 222/354 (63%), Positives = 277/354 (79%), Gaps = 23/354 (6%)

Query  5    YQTVQSQLQATPKTWLITGVAGFIGSNLLETLLKLGQRVVGLDNFATGHQHNLDEVQTLV  64
            Y+ ++++L  +PK WLITGVAGFIGS LLE LL L Q V+GLDNF+TG QHNLD+V+T V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   NGAQWANFHFIQGDIRILDDCRRAMTFLPLGEGRDGGQPGPIPVDYVLHQAALGSVPRSI  124
            +  QW+ F FIQGDIR + DC++A                   VDYVLHQAALGSVPRS+
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKA----------------CKNVDYVLHQAALGSVPRSL  107

Query  125  EDPITTNSANITGFLNMLVAARDARVQSFTYAASSSTYGDHPGLPKVEEVIGKPLSPYAV  184
             DPI+TNSANI GFLNML AARDA+V SFTYAASSSTYGDHP+LPK+EE IG+PLSPYAV
Sbjct  108  KDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAV  167

Query  185  TKYVNELYADVFARTYGFNAIGLRYFNVFGPRQDPDGAYAAVIPKWAAAMIQGKDVFING  244
            TKYVNELYADVFAR+Y FNAIGLRYFNVFG RQ+P+GAY+AVIP+W  +++++  ++ING
Sbjct  168  TKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYING  227

Query  245  DGETSRDFCFIENSVQANLLAATSADPAALNEVYNVAVSGRTTLNTLF----DELKLALA  300
            DG TSRDFC+IEN +QANLL+AT+ D A+ N VYNVAV++RT+LN L+    D L+L   
Sbjct  228  DGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRN  287

Query  301  GNGISYVKAPVYRDFRAGDVRHSQADIGKAKKLLGYMPSHEIKEGISQSIPWYI  354
             ++ +    P+Y+DFR GDV+HSQADI K K +L+Y P  +IKEG+ Q++ WYI
Sbjct  288  EQSRA---EPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

43) ispL in NC_012108


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  368 bits (1383),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 203/336 (61%), Positives = 268/336 (80%), Gaps = 0/336 (0%)

Query  4    EQIKQQLNSVKGQWLVTGAAGFIGSNLVETLLKLDQQVTGLDNFSTGFQHNLDAVEATVT  63
            E+++ +L     +WL+TG AGFIGS L+E LL L+Q V GLDNFSTG+QHNLD V ++V+
Sbjct  5    EELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVS  64

Query  64   PGQWQRFSFIKGDICDPSTCESACVNQDYVLHQAALGSVPRSVEDPLTTNANNITGFLNM  123
              QW RF FI+GDI   + C+ AC N DYVLHQAALGSVPRS+ DP++TN+ NI GFLNM
Sbjct  65   EEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNM  124

Query  124  LVAARNAKVRRFVYAASSSTYGDHPGLPKREDEIGKPLSPYAVTKYVNELYADVFASTYG  183
            L AAR+A V  F YAASSSTYGDHP+LPK E+ IG+PLSPYAVTKYVNELYADVFA +Y 
Sbjct  125  LTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYE  184

Query  184  FKTVGLRYFNVFGRRQDPRGAYAAVIPLWFASLIKEEEVFINGDGETSRDFCYIDNTVQA  243
            F+++GLRYFNVFGRRQ+P GAY+AVIP W+ SL+K+E ++INGDG TSRDFCYI+N +QA
Sbjct  185  FNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQA  244

Query  244  NLLAALAPDEDAVNRVYNVAFGERTTLNQLFSMIRDRVMERYPNIAGVQPVYRDFRPGDV  303
            NLL+A + D  + N+VYNVA G+RT+LN+L+ +IRD +  +  + +  +P+Y+DFR GDV
Sbjct  245  NLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDV  304

Query  304  RHSLADISRAKNLLGYDPQFSVAQGLDLAAEWYMEN  339
            +HS ADI++ K +L+Y+P+F + +GL  +  WY+++
Sbjct  305  KHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

44) NH44784_029481 in NC_021285


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  367 bits (1378),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 203/339 (60%), Positives = 272/339 (81%), Gaps = 4/339 (1%)

Query  3    TRFETVSRELAAAPRKWLVTGCAGFIGSNLVETLLKLDQTVTGLDNFATGHQRNLDEVRG  62
            T +E +   L  AP++WL+TG AGFIGS L+E LL L+QTV GLDNF+TG Q+NLD+VR 
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  63   SVTAEQWARFSFIEGDIRDLEACRRATQGVDFVLHQAALGSVPRSLKDPITTNEVNIGGF  122
            SV+ EQW+RF FI+GDIR +  C++A + VD+VLHQAALGSVPRSLKDPI+TN  NI+GF
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  123  LNMLVAARDAEVKSFVYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNELYASVFAR  182
            LNML AARDA+V SF YAASSSTYGDHP LPK+EE IG PLSPYAVTKYVNELYA VFAR
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  183  SYGFETVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGQDVTINGDGETSRDFCFVDNA  242
            SY F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K++ + INGDG TSRDFC+++N 
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  243  VQANILAAMAPA-EGRNQVYNVAVSGRSTLNQLFEFLVK-ALGN-QGVAYAKKPVYADFR  299
            +QAN+L+A +    ++N+VYNVAV++R++LN+L+ +L++ +L   +       P+Y DFR
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELY-YLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDVRHSQADVSKAGRLLGYQPTHTVLQGLEVAMPWYTQ  338
             GDV+HSQAD++K   +L+Y+P   + +GL  ++ WY +
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

45) BYI23_C011010 in NC_016590


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  367 bits (1378),  Expect = 8e-103, Method: Compositional matrix adjust.
 Identities = 202/335 (61%), Positives = 266/335 (80%), Gaps = 2/335 (0%)

Query  5    YESVRQQLQRNPQKWLITGVAGFIGSNLLEALLKLDQEVVGLDNFATGHQRNLDEVRSQV  64
            YE +R +L   P++WLITGVAGFIGS LLE LL L+Q V+GLDNF+TG Q+NLD+VR+ V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   SPAQWGRFSLVVGDIRNLDDCRAAVKGAAHVLHEAALGSVPRSVNDPITTHEVNISGFLN  124
            S  QW+RF ++ GDIR++ DC+ A K    VLH+AALGSVPRS++DPI+T+  NI GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAKVESFTYAASSSTYGDHPGLPKVEDRIGQPLSPYAVTKYANELYASVFARTY  184
            ML AARDA V SFTYAASSSTYGDHP+LPK+E+RIG+PLSPYAVTKY NELYA VFAR+Y
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GLNAIGLRYFNVFGKRQDPDGAYAAVIPKWTAALIDDEQVTINGDGETSRDFCFIDNVVQ  244
             +NAIGLRYFNVFG+RQ+P+GAY+AVIP+W  +L+ DE + INGDG TSRDFC+I+NV+Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  INILAAMSDA-NARNQVYNVAVGDRTTLNQLYDGLKRVLAD-NGVVNEGSAVYAPFRAGD  302
             N+L+A ++   ++N+VYNVAVGDRT+LN+LY  ++  L       + + ++Y  FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQANVDKAAQLLGYASAIPLADGLAIAMPWYI  337
            V+HSQA++ K   +L+Y + + + +GL  ++ WYI
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

46) Psyc_0651 in NC_007204


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  366 bits (1374),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 219/337 (65%), Positives = 282/337 (84%), Gaps = 2/337 (0%)

Query  6    TVYEQIKQTLANEPKTWLITGVAGFIGSNlletllllNQKVVGLDNFATGFQHNLDEVQS  65
            T YE+++  L   PK WLITGVAGFIGS LLE LL+LNQ V+GLDNF+TG+QHNLD+V++
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  66   LVSAQQWQGFTFIEGDIRNLADCQAACIGIDYVLHQAALGSVPRSIADPINTNETNISGF  125
             VS +QW  F FI+GDIR+++DCQ AC  +DYVLHQAALGSVPRS+ DPI TN +NI GF
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  126  LNMLTAARDAKVasftyaassstyGDHPALPKVEDAIGKPLSPYAVTKYVNELYADVFAR  185
            LNMLTAARDA V+SFTYAASSSTYGDHP LPK+E+ IG+PLSPYAVTKYVNELYADVFAR
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  186  TYDFNTIGLRYFNIFGKRQTPDGAYAAVIPKWTAAMIAGDAVYINGDGDTSRDFNFIENA  245
            +Y+FN+IGLRYFN+FG+RQ P+GAY+AVIP+W  +++ ++++YINGDG TSRDF +IEN 
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  246  VQANILSATATD-EAKNEVYNVAVGGRTTLNTLFTALHENLAL-NGVNYTQEAVYRDFRA  303
            +QAN+LSAT+ D  +KN VYNVAVG+RT+LN L+  +++ L L    +   E++Y+DFR 
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRD  301

Query  304  GDVRHSQADISKIQNALGYAPQFDIVQGIEKAMPWYV  340
            GDV+HSQADI+KI+  L+Y P+FDI +G+ +++ WY+
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

47) Nmul_A0271 in NC_007614


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  366 bits (1375),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 207/327 (64%), Positives = 265/327 (82%), Gaps = 0/327 (0%)

Query  18   WLVTGVAGFIGSNLLEALLKHNQKVVGLDNFSTGYLRNLEQIRDLVGEKAWGNFSFIEGD  77
            WL+TGVAGFIGS LLE LL  NQ V+GLDNFSTGY +NL+++R  V+E  W+ F FI+GD
Sbjct  18   WLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGD  77

Query  78   ICQLETCTNACQGVDFVLHQAALGSVPRSIQDPIRTNEANISGFLNMLVASRDAQVRRFI  137
            I ++  C +AC+ VD+VLHQAALGSVPRS++DPI TN ANI GFLNML A+RDA+V  F 
Sbjct  78   IRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFT  137

Query  138  YAASSSTYGDHPDLPKVEAVIGRPLSPYAVTKYVNELYAEVFARCYGLDSIGLRYFNVFG  197
            YAASSSTYGDHPDLPK+E  IGRPLSPYAVTKYVNELYA+VFAR Y +++IGLRYFNVFG
Sbjct  138  YAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFG  197

Query  198  PRQDPNGAYAAVIPQWVSALIRNQTLYINGDGETSRDFCYIDNVVQANLLAALSDNTGAV  257
             RQ+PNGAY+AVIP+W+ +L++++ +YINGDG TSRDFCYI+NV+QANLL+A +++ ++ 
Sbjct  198  RRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASK  257

Query  258  NQIYNVAVNERTSLNQLYGMMRELLLEKFPELENHRPTYVDFRKGDVRHSQADITKATQL  317
            N++YNVAV +RTSLN+LY ++R+ L     E     P Y DFR GDV+HSQADITK   +
Sbjct  258  NKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTF  317

Query  318  LGFEPSHRIGEGLRQAMGWYIAHLGAM  344
            L++EP   I EGL+Q++ WYI   +++
Sbjct  318  LSYEPEFDIKEGLKQTLKWYIDKHSTL  344

48) wbpP in NC_010170


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  366 bits (1376),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 207/337 (62%), Positives = 271/337 (81%), Gaps = 6/337 (1%)

Query  5    YQRIQQELRQAPRKWLVTGCAGFIGSNLLETLLKLDQTVVGLDNFATGHRHNLDEVRNSV  64
            Y+ ++  L  AP++WL+TG AGFIGS LLE LL L+QTV+GLDNF+TG +HNLD+VR SV
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   EPAQWARFTFVEGDIRDLAACQRAAEGVDHVLHQAALGSVPRSLNDPITTNDVNIGGFLN  124
               QW+RF F++GDIR ++ CQ+A   VD VLHQAALGSVPRSL+DPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAKVKTFVYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA V +F YAASSSTYGDHP+LPK+E+ IG+PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GLASVGLRYFNVFGKRQDPEGAYAAVIPKWTAAMIRGDDVVINGDGETSRDFCFVENAVQ  244
             + ++GLRYFNVFG+RQ+P+GAY+AVIP+W  ++++++ + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  ANLLGALAPE-EGVNQVYNVAYGGRTTLNQLYKFLAQTLG---GEGVRYDKPPVYADFRA  300
            ANLL+A + +  + N+VYNVA G+RT+LN+LY ++ + L     E  R    P+Y DFR 
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSR--AEPIYKDFRD  301

Query  301  GDVRHSQADIAKGGKLLGYQPAYDILRGLQTAMPWYI  337
            GDV+HSQADI+K   +L+Y+P +DI  GL+ ++ WYI
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

49) Dvul_2662 in NC_008751


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  366 bits (1375),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 206/340 (61%), Positives = 270/340 (80%), Gaps = 1/340 (0%)

Query  1    MSTFDSVLQDINASPRTWLVTGVAGFIGSNLLETLLRQGQRVVGLDNFLTGYQRNLDMVR  60
            M++++ +   +  +P+ WL+TGVAGFIGS LLE LL   Q V+GLDNF TGYQ+NLD VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   DLVGEERWASFRFIEGDIRDLATCHEACKGVDHVLHQAALGSVPRSIDDPILSNECNITG  120
              V+EE+W+ F FI+GDIR ++ C+ ACK VD VLHQAALGSVPRS+ DPI +N  NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FVNMLVAARDAGAKSFVYAASSSTYGDEPTLPKVEDIIGKPLSPYAVTKYVNELYADVFA  180
            F+NML AARDA   SF YAASSSTYGD+P LPK+E+ IG+PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RCYGFTAIGLRYFNVFGQRQDPFGAYAAVIPQWFASLLRGETVFVNGDGETSRDFCYIDN  240
            R Y F AIGLRYFNVFG+RQ+P GAY+AVIP+W+ SLL++E +++NGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VVQANILASLAPA-EARDKVYNVAFGQRTTLNELFDLIREEVVRHKPEAAGATCVHRDFR  299
            V+QAN+L++ +    +++KVYNVA G+RT+LNEL+ LIR+ +   + E + A  + +DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDVRHSLADITRAQTLLGYAPVYDVREGLRLAGDWYAAN  339
             GDV+HS ADIT+ +T+L+Y P +D++EGL+ +  WY  +
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

50) DVU0319 in NC_002937


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  366 bits (1375),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 206/340 (61%), Positives = 270/340 (80%), Gaps = 1/340 (0%)

Query  1    MSTFDSVLQDINASPRTWLVTGVAGFIGSNLLETLLRQGQRVVGLDNFLTGYQRNLDMVR  60
            M++++ +   +  +P+ WL+TGVAGFIGS LLE LL   Q V+GLDNF TGYQ+NLD VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   DLVGEERWASFRFIEGDIRDLATCHEACKGVDHVLHQAALGSVPRSIDDPILSNECNITG  120
              V+EE+W+ F FI+GDIR ++ C+ ACK VD VLHQAALGSVPRS+ DPI +N  NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FVNMLVAARDAGAKSFVYAASSSTYGDEPTLPKVEDIIGKPLSPYAVTKYVNELYADVFA  180
            F+NML AARDA   SF YAASSSTYGD+P LPK+E+ IG+PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RCYGFTAIGLRYFNVFGQRQDPFGAYAAVIPQWFASLLRGETVFVNGDGETSRDFCYIDN  240
            R Y F AIGLRYFNVFG+RQ+P GAY+AVIP+W+ SLL++E +++NGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VVQANILASLAPA-EARDKVYNVAFGQRTTLNELFDLIREEVVRHKPEAAGATCVHRDFR  299
            V+QAN+L++ +    +++KVYNVA G+RT+LNEL+ LIR+ +   + E + A  + +DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDVRHSLADITRAQTLLGYAPVYDVREGLRLAGDWYAAN  339
             GDV+HS ADIT+ +T+L+Y P +D++EGL+ +  WY  +
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

51) Deval_0289 in NC_017310


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  366 bits (1375),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 206/340 (61%), Positives = 270/340 (80%), Gaps = 1/340 (0%)

Query  1    MSTFDSVLQDINASPRTWLVTGVAGFIGSNLLETLLRQGQRVVGLDNFLTGYQRNLDMVR  60
            M++++ +   +  +P+ WL+TGVAGFIGS LLE LL   Q V+GLDNF TGYQ+NLD VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   DLVGEERWASFRFIEGDIRDLATCHEACKGVDHVLHQAALGSVPRSIDDPILSNECNITG  120
              V+EE+W+ F FI+GDIR ++ C+ ACK VD VLHQAALGSVPRS+ DPI +N  NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FVNMLVAARDAGAKSFVYAASSSTYGDEPTLPKVEDIIGKPLSPYAVTKYVNELYADVFA  180
            F+NML AARDA   SF YAASSSTYGD+P LPK+E+ IG+PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RCYGFTAIGLRYFNVFGQRQDPFGAYAAVIPQWFASLLRGETVFVNGDGETSRDFCYIDN  240
            R Y F AIGLRYFNVFG+RQ+P GAY+AVIP+W+ SLL++E +++NGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VVQANILASLAPA-EARDKVYNVAFGQRTTLNELFDLIREEVVRHKPEAAGATCVHRDFR  299
            V+QAN+L++ +    +++KVYNVA G+RT+LNEL+ LIR+ +   + E + A  + +DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDVRHSLADITRAQTLLGYAPVYDVREGLRLAGDWYAAN  339
             GDV+HS ADIT+ +T+L+Y P +D++EGL+ +  WY  +
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

52) TKWG_20440 in NC_017964


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  363 bits (1365),  Expect = 8e-102, Method: Compositional matrix adjust.
 Identities = 207/337 (62%), Positives = 268/337 (80%), Gaps = 2/337 (0%)

Query  4    AFDNLKNAIQAEPRTWLVTGCAGFIGSNLLETLLLLDQKVVGLDNFSTGFQHNLDEVQQA  63
            A+++L+  +   P+ WL+TG AGFIGS LLE LL+L+Q V+GLDNFSTG+QHNLD+V+ +
Sbjct  3    AYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTS  62

Query  64   VSAQQWANFKFIEGDIRDLDACKKAVAGVDYVLHQAALGSVPRSLDDPITTNAVNISGFL  123
            VS +QW+ F FI+GDIR +  C+KA   VDYVLHQAALGSVPRSL DPI+TN+ NI GFL
Sbjct  63   VSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFL  122

Query  124  NMLVAAREAGIKSFVYAASSSTYGDHPDLPKVEDKIGNPLSPYAVTKYVNELYANVFARA  183
            NML AAR+A + SF YAASSSTYGDHPDLPK+E++IG PLSPYAVTKYVNELYA+VFAR+
Sbjct  123  NMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARS  182

Query  184  YGFSSVGLRYFNVFGKRQNPDGAYAAVIPKWTASMIKGEDVFINGDGETSRDFCFVENAV  243
            Y F+++GLRYFNVFG+RQNP+GAY+AVIP+W  S++K+E ++INGDG TSRDFC++EN +
Sbjct  183  YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVI  242

Query  244  QanllaaanMP-EEGSQVFNVAVNARTSLNELFAHLASTLDK-NGVKYDKQPVYRDFRSG  301
            QANLL+A+       ++V+NVAV  RTSLNEL+  +   L+     +   +P+Y+DFR G
Sbjct  243  QANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDG  302

Query  302  DVRHSQADITKAHEQLGYKPTHDILEGIEVAMPWYTQ  338
            DV+HSQADITK    L+Y P  DI EG+  ++ WY +
Sbjct  303  DVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

53) Alide2_0710 in NC_015422


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  362 bits (1360),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 215/352 (62%), Positives = 275/352 (79%), Gaps = 15/352 (4%)

Query  9    SAYELLKSRLINEQHVWLVTGVAGFIGSNLLETLLKLNQRVVGLDNFATGHQRNLDEVQS  68
            +AYE L+++L+     WL+TGVAGFIGS LLE LL LNQ V+GLDNF+TG Q+NLD+V++
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  69   LVTPDQWANFRFIEGDIRSLNDCRNAMQFSPARSGNTDVKNEAVEYVLHQAALGSVPRSL  128
             V+ +QW+ F FI+GDIR + DC++A                 V+YVLHQAALGSVPRSL
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKA--------------CKNVDYVLHQAALGSVPRSL  107

Query  129  ADPITTNSANITGFLNVLATARDAGVKSFTYAASSSTYGDHPALPKVENIIGKPLSPYAV  188
             DPI+TNSANI GFLN+L++ARDA V SFTYAASSSTYGDHP LPK+E+ IG+PLSPYAV
Sbjct  108  KDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAV  167

Query  189  TKYVNELYAEVFARCYGFRTIGLRYFNVFGSRQDPNGAYAAVIPKWTAALLTRETVYING  248
            TKYVNELYA+VFAR Y F +IGLRYFNVFG RQ+PNGAY+AVIP+W  +LL  E +YING
Sbjct  168  TKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYING  227

Query  249  DGETSRDFCYvanavqanllaaTVIGSEATNQVYNIAVGGRTTLNQLFALLRENLAQF-G  307
            DG TSRDFCY+ N +QANLL+AT  +  + N+VYN+AVG+RT+LN+L+ L+R+ L     
Sbjct  228  DGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRN  287

Query  308  VDPVVQPAYRDFRAGDVRHSQADIGKAMTLLGYAPTHSIAEGLREAMRWYVD  359
             ++  +P Y+DFR GDV+HSQADI K  T+L+Y P   I EGL+++++WY+D
Sbjct  288  EQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

54) PT7_2138 in NC_015458


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  362 bits (1361),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 206/338 (61%), Positives = 269/338 (80%), Gaps = 2/338 (0%)

Query  3    TRYQEVTASLQTEPKVWLVTGCAGFIGSNLLEALLLMGQKVVGLDNFATGHHYNLDEVQK  62
            T Y+E+ + L   PK WL+TG AGFIGS LLE LL++ Q V+GLDNF+TG + NLD+V+ 
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  63   AVSAQQWSNFTFIEGDICDLETCKQATQGVDHVLHQAALGSVPRSLQDPITTNSVNIGGF  122
            +VS +QWS F FI+GDI  +  C++A + VD VLHQAALGSVPRSL+DPI+TNS NI+GF
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  123  LNMLVAARDAQVQSFVYAASSSTYGDHEELPKVEERIGRPLSPYAVTKYVNELYADVFQR  182
            LNML AARDA+V SF YAASSSTYGDH +LPK+EERIGRPLSPYAVTKYVNELYADVF R
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  183  AYGFGSVGLRYFNVFGKRQDPNGAYAAVIPKWIAAMIRGEDVVVNGDGETSRDFCFIDNV  242
            +Y F ++GLRYFNVFG+RQ+PNGAY+AVIP+WI +++++E + +NGDG TSRDFC+I+NV
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  243  VQANILASLAQP-EGVNQVYNVAVNARTSLNELFEYLAQSLGN-NGIVYDKQPVYADFRA  300
            +QAN+L++ ++   + N+VYNVAV  RTSLNEL+  + ++L          +P+Y DFR 
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRD  301

Query  301  GDVRHSQADISKARQLLGYEPMHTIVQGLEVSMPWYTQ  338
            GDV+HSQADI+K + +L+YEP   I +GL  ++ WY +
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

55) galE in NC_014323


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  361 bits (1355),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 205/340 (61%), Positives = 262/340 (78%), Gaps = 1/340 (0%)

Query  1    MTRYDTLCEQLPQHPKRWLITGVAGFIGSNLLARLLTLGQQVTGLDNFSTGRQANLEEVR  60
            MT Y+ L  +L   PKRWLITGVAGFIGS LL  LL L Q V GLDNFSTG Q NL++VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   AEVGAAAWANFRFIEGDICDAATCLRACDGADYVLHQAALGSVSRSIEDPVRTNLNNVNG  120
            + V+   W+ F FI+GDI   + C +AC   DYVLHQAALGSV+RS+ DP+ TN  N++G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAGVARFVYAASSSTYGDHPGLPKVEEVIGKPLSPYAVTKYVNELYAEVFA  180
            FLNML AARDA V+ F YAASSSTYGDHP+LPK+EE IG+PLSPYAVTKYVNELYA+VFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RCYGMESIGLRYFNVFGRRQDPHGAYAAVIPQWVTAMIRNGELRINGDGQTSRDFCYIDN  240
            R Y  ++IGLRYFNVFGRRQ+P+GAY+AVIP+W+ +++++  + INGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VVQANLLAATAGE-EAVNQVYNVALNDRTSLNDLYAMMRELLVQRFPHLQEHRPSYVGFR  299
            V+QANLL+AT+ +  + N+VYNVA+ DRTSLN+LY ++R+ L  +  +     P Y +FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  300  AGDIRDSQADIGKARQRLGYAPTHRLRAGLEQAMSWYIDH  339
             GD+++SQADI K +  L+Y P   ++ GL Q++ WYID 
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

56) PSYCG_03400 in NC_021661


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  360 bits (1352),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 217/339 (65%), Positives = 285/339 (85%), Gaps = 4/339 (1%)

Query  5    LTAYEKVQKVLINEPKTWLITGVAGFIGSNlleellllNQKVVGLDNFATGFQHNLDEVQ  64
            +TAYE ++  L+  PK WLITGVAGFIGS LLEELL+LNQ V+GLDNF+TG+QHNLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  65   GLVNEDQWQNFTFIEGDIRNLDDCQSACIGVDYVLHQAALGSVPRSIANPINTNDTNISG  124
              V+E+QW  F FI+GDIR++ DCQ AC  VDYVLHQAALGSVPRS+ +PI TN +NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  125  YLNMLVAARDAKVasftyaassstyGDHPALPKVEDAIGNPLSPYAVTKYVNELYADVFA  184
            +LNML AARDA V+SFTYAASSSTYGDHP LPK+E+ IG PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  185  RTYNFKTIGLRYFNIFGKRQTPDGAYAAVIPKWTAAMIAGDEVFINGDGDTSRDFNFIEN  244
            R+Y+F++IGLRYFN+FG+RQ P+GAY+AVIP+W  +++ ++ ++INGDG TSRDF +IEN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  245  AVQANILAATANN-EAKNQVYNVAVGGRTTLNTLFSALKE--HLSTNEVGYTQDPVYRDF  301
             +QAN+L+AT+N+  +KN+VYNVAVG+RT+LN L+  +++  +L  NE +   +P+Y+DF
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQS-RAEPIYKDF  299

Query  302  RAGDVRHSQADISKIQNALGYAPQFDIIQGIEKAMPWYV  340
            R GDV+HSQADI+KI+  L+Y P+FDI +G+ +++ WY+
Sbjct  300  RDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

57) wbpP in NC_019382


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  360 bits (1353),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 214/336 (64%), Positives = 269/336 (81%), Gaps = 2/336 (0%)

Query  3    TRYEDLRATLPRAPEKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRA  62
            T YE+LR+ L  AP +WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR+
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  63   AVTPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGF  122
            +V+ EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GF
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  123  LNMLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFAR  182
            LNML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFAR
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  183  SYGFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEna  242
            SY F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN 
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  243  vqan-llaamaapeganQVYNVAYNARTTLTELFEHLRRALAG-QGVSYEKAPVYAEFRA  300
            +QAN L A+     + N+VYNVA   RT+L EL+  +R +L   +       P+Y +FR 
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRD  301

Query  301  GDVRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWY  336
            GDV+HSQADI K   +L+YEP +DI  GL  ++ WY
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

58) wbpP in NC_002927


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  360 bits (1353),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 213/336 (64%), Positives = 269/336 (81%), Gaps = 2/336 (0%)

Query  3    TRYEDLRATLPRAPEKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRA  62
            T YE+LR+ L  AP +WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR+
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  63   AVTPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGF  122
            +V+ EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GF
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  123  LNMLVAARDAQVQAFVYAASSSTYGDHPDLPKVEDRIGNPLSPYAVTKYVNELYADVFAR  182
            LNML AARDA+V +F YAASSSTYGDHPDLPK+E+RIG PLSPYAVTKYVNELYADVFAR
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  183  SYGFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEna  242
            SY F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN 
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  243  vqan-llaamaapeganQVYNVAYNARTTLTELFEHLRRALAG-QGVSYEKAPVYAEFRA  300
            +QAN L A+     + N+VYNVA   RT+L EL+  +R +L   +       P+Y +FR 
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRD  301

Query  301  GDVRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWY  336
            GDV+HSQADI K   +L+YEP +DI  GL  ++ WY
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

59) wbpP in NC_018829


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  360 bits (1351),  Expect = 9e-101, Method: Compositional matrix adjust.
 Identities = 214/336 (64%), Positives = 268/336 (80%), Gaps = 2/336 (0%)

Query  3    TRYEDLRATLPRAPEKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRA  62
            T YE+LR+ L  AP +WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR+
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  63   AVTPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGF  122
            +V+ EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GF
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  123  LNMLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFAR  182
            LNML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFAR
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  183  SYGFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEna  242
            SY F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN 
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  243  vqan-llaamaapeganQVYNVAYNARTTLTELFEHLRRTLAG-QGVSYEKAPVYAEFRA  300
            +QAN L A+     + N+VYNVA   RT+L EL+  +R  L   +       P+Y +FR 
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRD  301

Query  301  GDVRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWY  336
            GDV+HSQADI K   +L+YEP +DI  GL  ++ WY
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

60) Dbac_1464 in NC_013173


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  359 bits (1347),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 195/327 (60%), Positives = 259/327 (80%), Gaps = 0/327 (0%)

Query  8    LLESKQRWLVTGVAGFIGSNLLETLLCHDHEVTGLDNFSTGHRHNLDEVQGSVTPEQWAR  67
            L+ + +RWL+TGVAGFIGS LLE LL  ++ V GLDNFSTG +HNLD+V+ SV+ EQW+R
Sbjct  11   LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSR  70

Query  68   FRFIEGDIRDLPTCMEACKGATYVLHQAALGSVPRSIVDPLLTNANNVTGFLNMLVAAKD  127
            F FI+GDIR +  C  ACK   YVLHQAALGSVPRS+ DP+ TN+ N+ GFLNML AA+D
Sbjct  71   FIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARD  130

Query  128  STVRRFVYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYAEVFLKTYGLDSVGL  187
            + V  F YAASSSTYGDHP+LPK+E+ IG+PLSPYAVTKYVNELYA+VF ++Y ++++GL
Sbjct  131  AHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGL  190

Query  188  RYFNVFGKRQDPEGAYAAVIPKWFAGLLRGETVWINGDGETSRDFCFIDNCVQANILAAC  247
            RYFNVFG+RQ+P+GAY+AVIP+W+ +LL++E + INGDG TSRDFC+I+N +QAN+L+A 
Sbjct  191  RYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSAT  250

Query  248  ATGPDVAGSVFNVAFGQRTTLGELFYLIRDEAAKFMPACAEALPSHRDFRAGDVRHSLAD  307
            + +      V+NVA G+RT+L EL+YLIRD         + A P  +DFR GDV+HS AD
Sbjct  251  TNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQAD  310

Query  308  ISKSRRLLGYDPAYDVREGLAKAGEWY  334
            I+K + +L+Y+P +D++EGL ++  WY
Sbjct  311  ITKIKTFLSYEPEFDIKEGLKQTLKWY  337

61) vipB in NC_015723


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  356 bits (1338),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 211/357 (60%), Positives = 280/357 (79%), Gaps = 15/357 (4%)

Query  4    NAYAHLKARLAATPRTWLVTGVAGFIGSNLLETLLRLDQRVVGLDNFSTGHRRNLIEVEA  63
             AY +L+++L  +P+ WL+TGVAGFIGS LLE LL L+Q V+GLDNFSTG ++NL +V +
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  64   LVSPRQWANFRFIEGDIRNLEHCRSAMRFCAPGREGAANGLYPVDFVLHQAALGSVPRSL  123
             VS  QW+ F FI+GDIR++ +C+ A   C             VD+VLHQAALGSVPRSL
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKA---CKN-----------VDYVLHQAALGSVPRSL  107

Query  124  EDPIATHSVNISGFLNLLVAARDAQVSTFVYAASSSTYGDHPGLPKVEDRIGKPLSPYAV  183
             DPIAT+S NI GFLN+L AARDA+VS+F YAASSSTYGDHP+LPK+E+RIG+PLSPYAV
Sbjct  108  KDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAV  167

Query  184  TKYANELYADVFHRCYGVHATGLRYFNVFGPRQDPNGAYAAVIPKWIAALLRHEAVYING  243
            TKY NELYADVF R Y  +A GLRYFNVFG RQ+PNGAY+AVIP+WI +LL++E++YING
Sbjct  168  TKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYING  227

Query  244  DGETSRDFCYvanavqanllaaaSDHCEGDSQVYNVAVGDRTTLATLFELLRDGLRPY-G  302
            DG TSRDFCY+ N +QANLL+A++++  + ++VYNVAVGDRT+L  L+ L+RDGL     
Sbjct  228  DGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRN  287

Query  303  VAAGTEPVYRGFRAGDVRHSQADIGKAQRLLGYLPTHRVRDGLAEAMPWYVQMQQAL  359
              + +EP+Y++FR GDV+HSQADI K + +L+Y P   +++GL +++ WY++ + +L
Sbjct  288  EQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTL  344

62) VEJY3_01095 in NC_016613


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  356 bits (1339),  Expect = 8e-100, Method: Compositional matrix adjust.
 Identities = 218/337 (65%), Positives = 276/337 (82%), Gaps = 2/337 (0%)

Query  1    MTKYEQIQEELLESPKTWLVTGVAGFIGSNLLEKLLKLNQTVVGLDNFATGHQHNLDEVQ  60
            MT YE+++  L+ +PK WL+TGVAGFIGS LLE LL LNQTV+GLDNF+TG QHNLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SLVTEAQWDRFAFIEGDIREPKTCQQAVKGVDYVLHEAALGSVPRSIADPLTTNAANITG  120
            + V+E QW RF FI+GDIR    CQ+A K VDYVLH+AALGSVPRS+ DP++TN+ANI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLDAAKEEGVssftyaassstyGDHPALPKIEENIGNPLSPYAVTKYVNELYAGVYA  180
            FLNML AA++  VSSFTYAASSSTYGDHP LPKIEE IG PLSPYAVTKYVNELYA+V+A
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMINGADVYINGDGETSRDFCYIDN  240
            R+Y F++IGLRYFNVFGRRQ+PNGAY+AVIP+W  +++++  +YINGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  VVQMNLLAATADE-DHKDEIYNVAVGDRTSLNTLFDALKVSLADCSVVYDR-QPIYQDFR  298
            V+Q NLL+AT+++   K+ +YNVAVGDRTSLN L+  ++ +L        R +PIY+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  299  VGDVRHSQADISKAQQKLGYTPSYRIYDGIGQSMPWY  335
             GDV+HSQADI+K +  L+Y P + I +G+ Q++ WY
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

63) Bpro_3996 in NC_007948


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  355 bits (1332),  Expect = 3e-99, Method: Compositional matrix adjust.
 Identities = 225/365 (62%), Positives = 277/365 (76%), Gaps = 26/365 (7%)

Query  1    MTAYEQLQIRLKSEPRAWLVTGVAGFIGSNLLEALLKLGQRVVGLDNFATGYQRNLDEVQ  60
            MTAYE+L+ +L   P+ WL+TGVAGFIGS LLE LL L Q V+GLDNF+TGYQ+NLD+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TLVSPEQWANFHFIEGDIRNLPDCQRAMSWPPLPTEDGRGEGSPVDYVLHQAALGSVPRS  120
            T VS EQW+ F FI+GDIR++ DCQ+A                 VDYVLHQAALGSVPRS
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKA--------------CKNVDYVLHQAALGSVPRS  106

Query  121  LADPITTNAANITGFLNMLVAARDAGVKSFTYAASSSTYGDHPALPKVEHTIGKPLSPYA  180
            L DPI+TN+ANI GFLNML AARDA V SFTYAASSSTYGDHP LPK+E+ IG+PLSPYA
Sbjct  107  LKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYA  166

Query  181  VTKYVNELYAEVFARCYGFNTIGLRYFNVFGARQNPSGAYAAVIPKWTAAMMKGEDVFIN  240
            VTKYVNELYA+VFAR Y FN+IGLRYFNVFG RQNP+GAY+AVIP+W  +++K+E ++IN
Sbjct  167  VTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYIN  226

Query  241  GDGETSRDFCYvanavqanllaaTVSDlplpleegggegspTNQVYNVAVGDRTTLNTLF  300
            GDG TSRDFCY+ N +QANLL+AT +D            ++ N+VYNVAVGDRT+LN L+
Sbjct  227  GDGSTSRDFCYIENVIQANLLSATTND-----------LASKNKVYNVAVGDRTSLNELY  275

Query  301  GLIRDNLIA-RGVPVSTEPKYRDFRAGDVRNSLADIGKAHRMLGYAPTHRIDQGLQLAIP  359
             LIRD L   R     +EP Y+DFR GDV++S ADI K    L+Y P   I +GL+ ++ 
Sbjct  276  YLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLK  335

Query  360  WYVQN  364
            WY+++
Sbjct  336  WYIDK  340

64) CPS_3643 in NC_003910


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  354 bits (1331),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 210/342 (62%), Positives = 279/342 (82%), Gaps = 6/342 (1%)

Query  1    MTQFKKIKQELLNSPKTWLITGCAGFIGSNlletllllNQKVVGLDNFATGHQHNFDEVQ  60
            MT +  ++  L+ +PK WLITG AGFIGS LLE LL+LNQ V+GLDNF+TG QHN+D+V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   TQVSAEQWQNFYFVKGDIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSA  120
            T VS EQW  F F++GDIR++ DCQ A       VDY+LHQAALGSVPRS+ DP+ TNSA
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKA----CKNVDYVLHQAALGSVPRSLKDPIATNSA  116

Query  121  NITGFLTMLTAAKETQVKSFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTKYVNELYA  180
            NI GFL MLTAA++++V SF YAASSSTYGDHP LPK+E+ IG+PLSPYAVTKYVNELYA
Sbjct  117  NIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYA  176

Query  181  DVFHKTYGLNCTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFC  240
            DVF ++Y +N  GLRYFNVFG+RQ+P+GAY+AVIP+W ++++ +E + INGDG TSRDFC
Sbjct  177  DVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFC  236

Query  241  FVENAVQANILAATAND-AGKNQVYNVALGDRTSLNTLFNSLKVALQA-NGVDYQKSPTY  298
            ++EN +QAN+L+AT+ND A+KN+VYNVA+GDRTSLN L+  ++ +L+     + +  P Y
Sbjct  237  YIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIY  296

Query  299  QDFRAGDVRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYI  340
            +DFR GDV+HSQADI+K K+++++EPEF I++G+ +++ WYI
Sbjct  297  KDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

65) Reut_B5374 in NC_007348


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  354 bits (1331),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 215/356 (61%), Positives = 269/356 (76%), Gaps = 16/356 (4%)

Query  20   TYANLRTSLVANPCTWLVTGVAGFIGSNLLEALLRLNQRVVGLDNFLTGHRRNLHEVQAL  79
            +Y +LRT LV  P  WL+TGVAGFIGS LLE LL LNQ V+GLDNF TG ++NL++V++ 
Sbjct  3    AYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTS  62

Query  80   VSPAQWENFQFIEGDIRDLEQCRSAMRFCSGEREGTHGASSHPVDFVLHQAALGSVPRSL  139
            VS  QW  F FI+GDIR + +C+ A   C              VD+VLHQAALGSVPRSL
Sbjct  63   VSEEQWSRFIFIQGDIRKFTDCQKA---CKN------------VDYVLHQAALGSVPRSL  107

Query  140  EDPIATHSVNISGFLNMLVAARDAEVRAFVYAASSSTYGDHPGLPKTEDRIGKPLSPYAV  199
             DPIAT+S NI GFLNML AARDA+V +F YAASSSTYGDHP+LPK E+RIG+PLSPYAV
Sbjct  108  KDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAV  167

Query  200  TKYANELYADVFRRCYSLRAIGLRYFNVFGPRQDPNGAYAAVIPRWISALLRRETVYING  259
            TKY NELYADVF R Y + AIGLRYFNVFG RQ+PNGAY+AVIPRWI +LL+ E +YING
Sbjct  168  TKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYING  227

Query  260  DGETSRDFCYvanavqanllaalSCSGDAESQIYNVAVGDRTTLSTLFQLLRDGLRPY-G  318
            DG TSRDFCY+ N +QANLL+A +    + +++YNVAVGDRT+L+ L+ L+RDGL     
Sbjct  228  DGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRN  287

Query  319  IPADTQPTYRAFRAGDVRHSQADIGKAQRLLGYQPTHRIGDGLAEAMHWYVQLHRT  374
              + ++P Y+ FR GDV+HSQADI K + +L+Y+P   I +GL +++ WY++ H T
Sbjct  288  EQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHST  343

66) Thivi_2177 in NC_018012


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  353 bits (1326),  Expect = 8e-99, Method: Compositional matrix adjust.
 Identities = 209/340 (62%), Positives = 269/340 (80%), Gaps = 0/340 (0%)

Query  1    MNQYAQLRLHLSANPKTWLITGVAGFIGCNLLEILLKLDQPVVGLDNFATGHRQNLEQIQ  60
            M  Y +LR  L   PK WLITGVAGFIG  LLE LL L+Q V+GLDNF+TG ++NL++++
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   QAVTPAQWARFNFIEGDIRQPDACRAACVGVDYVLHQAALGSVPRSLEDPIATNAANIDG  120
             +V+  QW+RF FI+GDIR+   C+ AC  VDYVLHQAALGSVPRSL DPIATN+ANIDG
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FLNMLVAARDAQVLRFVYAASSSTYGDHPGLPKVEDVIGKPLSPYAVTKLVNEQYAEVFA  180
            FLNML AARDA+V  F YAASSSTYGDHP+LPK+E+ IG+PLSPYAVTK VNE YA+VFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  RAYGFKTIGLRYFNIFGAHQDPNGayaavvpkwaaamiaNEPVWINGDGETSRDFCYIAN  240
            R+Y F++IGLRYFN+FG +Q+PNGAY+AV+P+W  +++ +EP+ INGDG TSRDFCYI N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  AVQANLLAATAEHPDAANQVYNVAVGERTSLNELFESIRATLAPRFPHLQDFAPSYRDFR  300
             +QANLL+AT+++  + N+VYNVAVG+RTSLNEL+  IR  L  +  +     P Y+DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  AGDVRHSLADISKARNLLGYAPSHRIQDGLAEAMDWYVSD  340
             GDV+HS ADI+K + +L+Y P   I++GL +++ WY+  
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

67) BB0877 in NC_002927


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1323),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 209/336 (63%), Positives = 267/336 (80%), Gaps = 2/336 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapeganQVYNVAYNARTTLTELFEHLRRALAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     + N+VYNVA   RT+L EL+  +R +L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQ  338
            V+HSQADI K   +L+YEP +DI  GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

68) BPP0792 in NC_002928


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1323),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 209/336 (63%), Positives = 267/336 (80%), Gaps = 2/336 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapeganQVYNVAYNARTTLTELFEHLRRALAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     + N+VYNVA   RT+L EL+  +R +L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQ  338
            V+HSQADI K   +L+YEP +DI  GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

69) BN115_0846 in NC_018829


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1323),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 209/336 (63%), Positives = 266/336 (80%), Gaps = 2/336 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapeganQVYNVAYNARTTLTELFEHLRRTLAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     + N+VYNVA   RT+L EL+  +R  L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQ  338
            V+HSQADI K   +L+YEP +DI  GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

70) wbpP in NC_002928


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1321),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 209/334 (63%), Positives = 266/334 (80%), Gaps = 2/334 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapeganQVYNVAYNARTTLTELFEHLRRALAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     + N+VYNVA   RT+L EL+  +R +L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWY  336
            V+HSQADI K   +L+YEP +DI  GL  ++ WY
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

71) wbpP in NC_018518


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1323),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 209/336 (63%), Positives = 266/336 (80%), Gaps = 2/336 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapeganQVYNVAYNARTTLTELFEHLRRTLAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     + N+VYNVA   RT+L EL+  +R  L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQ  338
            V+HSQADI K   +L+YEP +DI  GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

72) BN118_2814 in NC_018518


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1323),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 209/336 (63%), Positives = 266/336 (80%), Gaps = 2/336 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapeganQVYNVAYNARTTLTELFEHLRRTLAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     + N+VYNVA   RT+L EL+  +R  L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQ  338
            V+HSQADI K   +L+YEP +DI  GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

73) BN117_0823 in NC_018828


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1321),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 210/334 (63%), Positives = 266/334 (80%), Gaps = 2/334 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapesanQVYNVAYNARTTLTELFEHLRRALAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     S N+VYNVA   RT+L EL+  +R +L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWY  336
            V+HSQADI K   +L+YEP +DI  GL  ++ WY
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

74) BN117_2658 in NC_018828


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1321),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 210/334 (63%), Positives = 266/334 (80%), Gaps = 2/334 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapesanQVYNVAYNARTTLTELFEHLRRALAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     S N+VYNVA   RT+L EL+  +R +L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWY  336
            V+HSQADI K   +L+YEP +DI  GL  ++ WY
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

75) wbpP in NC_017223


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1323),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 209/336 (63%), Positives = 266/336 (80%), Gaps = 2/336 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapeganQVYNVAYNARTTLTELFEHLRRTLAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     + N+VYNVA   RT+L EL+  +R  L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQ  338
            V+HSQADI K   +L+YEP +DI  GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

76) BPTD_3111 in NC_017223


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1323),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 209/336 (63%), Positives = 266/336 (80%), Gaps = 2/336 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapeganQVYNVAYNARTTLTELFEHLRRTLAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     + N+VYNVA   RT+L EL+  +R  L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQ  338
            V+HSQADI K   +L+YEP +DI  GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

77) wbpP in NC_002929


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1323),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 209/336 (63%), Positives = 266/336 (80%), Gaps = 2/336 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapeganQVYNVAYNARTTLTELFEHLRRTLAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     + N+VYNVA   RT+L EL+  +R  L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQ  338
            V+HSQADI K   +L+YEP +DI  GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

78) BP3149 in NC_002929


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  352 bits (1323),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 209/336 (63%), Positives = 266/336 (80%), Gaps = 2/336 (0%)

Query  5    FETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAV  64
            +E   ++L   P++WL+TG AGFIGS LLE LL L+Q+V+GLDNF+TG QHNLD+VR++V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   TPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLN  124
            + EQW+RF FI+GDIR ++ CQ+A + VD VLHQAALGSVPRSLKDPI+TN  NI+GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY  184
            ML AARDA+V +F YAASSSTYGDHPDLPK+EERIG PLSPYAVTKYVNELYADVFARSY
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVEnavq  244
             F+++GLRYFNVFG+RQ+P+GAY+AVIP+W  +++K+E + INGDG TSRDFC++EN +Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  an-llaamaapeganQVYNVAYNARTTLTELFEHLRRTLAG-QGVSYEKAPVYAEFRAGD  302
            AN L A+     + N+VYNVA   RT+L EL+  +R  L   +       P+Y +FR GD
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD  303

Query  303  VRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQ  338
            V+HSQADI K   +L+YEP +DI  GL  ++ WY +
Sbjct  304  VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

79) vipB in NC_014145


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  349 bits (1310),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 191/326 (59%), Positives = 254/326 (78%), Gaps = 0/326 (0%)

Query  11   PQRWLVTGSAGFIGSHLIQTLLTHGQDVVSLDNFSTGHQSNLDEVRRLVGEEAWKRHTFI  70
            P+RWL+TG AGFIGS L++ LL   Q V++LDNFSTG Q NLD+VR  V+EE W R  FI
Sbjct  15   PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFI  74

Query  71   EGDIVDPQTCQRACQGVNIVLHEAALGSVPRSIENPLATHAVNATGFLNMLVAARDAGVG  130
            +GDI     CQ+AC+ V+ VLH+AALGSVPRS+ +P+AT++ N  GFLNML AARDA V+
Sbjct  75   QGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS  134

Query  131  RFVYAASSSTYGDHPGLPKVEDLIGKPLSPYAVTKYLNELYADVFGRVYGLQSIGLRYFN  190
             F YAASSSTYGDHP+LPK+E+ IG+PLSPYAVTKY+NELYADVF+R Y +++IGLRYFN
Sbjct  135  SFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFN  194

Query  191  VFGTRQDPNGPYAAVIPNWAKAIRGNQPCFINGDGETTRDFCYIDNVVQANVLAGLSTHP  250
            VFG RQ+PNG+Y+AVIP W  ++  ++P +INGDG T+RDFCYI+NV+QAN+L++ + + 
Sbjct  195  VFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL  254

Query  251  ESANQVYNVAFGEQTSLNTLHQLLSEEIMALDTSVKFTPPVYRDFRKGDVRHSLADISKA  310
             S N+VYNVA G++TSLN L  L+ + +         + P+Y+DFR GDV+HS ADI+K 
Sbjct  255  ASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKI  314

Query  311  KRLLGYSPDFSVRAGLKIAMPWYVAK  336
            K +L+Y P+F ++ GLK ++ WY+ K
Sbjct  315  KTFLSYEPEFDIKEGLKQTLKWYIDK  340

80) Lcho_3068 in NC_010524


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  348 bits (1308),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 200/338 (60%), Positives = 257/338 (77%), Gaps = 1/338 (0%)

Query  7    DLVALLEGQSRRWLVTGSAGFIGSHLLETLLAHGQQVTSLDNFATGHRHNLQAVRESVGE  66
            +L + L   ++RWL+TG AGFIGS LLE LL   Q V +LDNF+TG +HNL+ VR SV+E
Sbjct  6    ELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE  65

Query  67   AAWARHHFIEGDIADPDTCVAACEGAQFVLHQAALGSVPRSLKDPQTTHRANATGFLNML  126
              W+R  FI+GDI     C  AC   ++VLHQAALGSVPRSLKDP +T+ AN  GFLNML
Sbjct  66   EQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNML  125

Query  127  VAARDV-GARFVYAASSSTYGDSPTLPKVEDVIGRPLSPYAVTKYLNELYAEVFGRCYGM  185
             AARD   + F YAASSSTYGD P LPK+E+ IGRPLSPYAVTKY+NELYA+VF+R Y  
Sbjct  126  TAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEF  185

Query  186  QTIGLRYFNVFGPRQDPNGAYAAVIPRWIAAMLRGEPCTINGDGETSRDFCYIANTVQAN  245
            ++IGLRYFNVFG RQ+PNGAY+AVIPRWI ++L++EP  INGDG TSRDFCYI N +QAN
Sbjct  186  NAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQAN  245

Query  246  LRAALATQDAAVNQVYNVAVGDRTTLNQLHAALAAGVERERPSLQVAQPAYADFRGGDVR  305
            L +A + + A+ N+VYNVAVGDRT+LN+L   +  G++  R     A+P Y DFR+GDV+
Sbjct  246  LLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVK  305

Query  306  HSLADVSKARTLLGYEPTHDVHEGLAEAIAWYVANAAA  343
            HS AD++K +T+L+YEP  D+ EGL +++ WY+ + ++
Sbjct  306  HSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHST  343

81) DvMF_2280 in NC_011769


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  348 bits (1306),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 205/340 (61%), Positives = 264/340 (78%), Gaps = 0/340 (0%)

Query  1    MTRYTALMQELEAAPRTWLVTGVAGFIGSNLLETLLMHGQKVVGLDNFATGYQRNLDMVR  60
            MT Y  L   L  AP+ WL+TGVAGFIGS LLE LL   Q V+GLDNF+TGYQ+NLD VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   EIVGADLWRNFRFKEGDIRNLEHCREVCEGVDHVLHQAALGSVPRSIEDPILANESNISG  120
              V+ + W  F F +GDIR++ +C+  C  VD VLHQAALGSVPRS+ DPI +N +NI G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  FVNMMVAARDAKVKTFVYAASSSTYGDEPTLPKVEDKIGKPLSPYAVTKYVNELYADVFA  180
            F+NM+ AARDA V +F YAASSSTYGD+P LPK+E++IG+PLSPYAVTKYVNELYADVFA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  TCYGMKAIGLRYFNVFGKRQDPFGAYAAVIPQWFASLLRGETVFINGDGETSRDFCYIDN  240
              Y  +AIGLRYFNVFG+RQ+P GAY+AVIP+W+ SLL++E ++INGDG TSRDFCYI+N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  CVQanllaatatdeaalntVYNVAFGERTDLNQLFDLIREEVSRHKPEAATAKPEHREFR  300
             +QANLL+AT+ D A+ N VYNVA G+RT LN+L+ LIR+ ++  + E + A P  ++FR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  FGDVRHSLADISRAHTRLGYEPVYSVRQGLRLSGDWYAAN  340
             GDV+HS ADI++  T L+YEP + +++GL+ +  WY  +
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

82) Tint_1301 in NC_014153


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  348 bits (1307),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 191/326 (59%), Positives = 254/326 (78%), Gaps = 0/326 (0%)

Query  11   PQRWLVTGSAGFIGSHLIQTLLTHGQDVVSLDNFSTGHQSNLDEVRRLVGEEAWKRHTFI  70
            P+RWL+TG AGFIGS L++ LL   Q V++LDNFSTG Q NLD+VR  V+EE W R  FI
Sbjct  15   PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFI  74

Query  71   EGDIVDPQTCQQACQGVNIVLHEAALGSVPRSIENPLATHAVNATGFLNMLVAARDAGVS  130
            +GDI     CQ+AC+ V+ VLH+AALGSVPRS+ +P+AT++ N  GFLNML AARDA VS
Sbjct  75   QGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS  134

Query  131  RFVYAASSSTYGDHPGLPKVEDLIGKPLSPYAVTKYLNELYADVFGRVYGLQSIGLRYFN  190
             F YAASSSTYGDHP+LPK+E+ IG+PLSPYAVTKY+NELYADVF+R Y +++IGLRYFN
Sbjct  135  SFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFN  194

Query  191  VFGTRQDPNGPYAAVIPNWAKAIRGNQPCFINGDGETTRDFCYVDNVVQANVLAGLSTHP  250
            VFG RQ+PNG+Y+AVIP W  ++  ++P +INGDG T+RDFCY++NV+QAN+L++ + + 
Sbjct  195  VFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL  254

Query  251  ESANQVYNVAFGEQTSLNTLHQLLSEEIMALDTSVKFTPPVYRDFRKGDVRHSLADISKA  310
             S N+VYNVA G++TSLN L  L+ + +         + P+Y+DFR GDV+HS ADI+K 
Sbjct  255  ASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKI  314

Query  311  KRLLGYSPDFSVRAGLKIAMPWYVAK  336
            K +L+Y P+F ++ GLK ++ WY+ K
Sbjct  315  KTFLSYEPEFDIKEGLKQTLKWYIDK  340

83) Bphyt_4705 in NC_010676


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  347 bits (1304),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 207/338 (62%), Positives = 273/338 (81%), Gaps = 6/338 (1%)

Query  5    YDTVRQQLAGRPQQWLITGVAGFIGSNLLEALLKLDQTVVGLDNFSTGYQRNLDEVRSVV  64
            Y+ +R +L   P++WLITGVAGFIGS LLE LL L+QTV+GLDNFSTGYQ+NLD+VR+ V
Sbjct  4    YEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV  63

Query  65   SPEQWKRFRFIEGDIRRLEDCVSAVHGVDHVLHEAALGSVPRSVADPIATHEVNISGFLN  124
            S EQW RF FI+GDIR++ DC  A   VD VLH+AALGSVPRS+ DPIAT+  NI GFLN
Sbjct  64   SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLN  123

Query  125  MLVAARDAQVssftyaassstyGDHLGLPKVEDQIGQPLSPYAVTKYANELYASVFARAY  184
            ML AARDA+VSSFTYAASSSTYGDH +LPK+E++IG+PLSPYAVTKY NELYA VFAR+Y
Sbjct  124  MLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183

Query  185  GFKTIGLRYFNAFGKRQDPDGAYAAVIPKWTAALIAGDDVLINGDGETSRDFCFVDNVVQ  244
             F++IGLRYFN FG+RQ+P+GAY+AVIP+W  +L+ ++ + INGDG TSRDFC+++NV+Q
Sbjct  184  EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243

Query  245  ANILAAMSDE-TARNEVYNVAVGDRTTLIQLYDGLRAVLT---DNGVRCDKRPVFGPFRA  300
            AN+L+A +++ +++N VYNVAVGDRT+L +LY  +R  L    ++  R +  P++  FR 
Sbjct  244  ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAE--PIYKDFRD  301

Query  301  GDVRHSQANVDKAERLLGYENRISFVEGLSRAMPWYIE  338
            GDV+HSQA++ K   +L+YE  + + EGL +++ WYI+
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

84) DGI_1709 in NC_022444


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  342 bits (1285),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 202/336 (61%), Positives = 261/336 (78%), Gaps = 0/336 (0%)

Query  8    NEFKWMLDQPPRKWLVTGVAGFIGSNLLETLLFLGQHVVGLDNFSTGSERNLADVREAVG  67
            +E++  L  +P++WL+TGVAGFIGS LLE LLFL Q V+GLDNFSTG ++NL DVR +V+
Sbjct  5    EELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVS  64

Query  68   EDRWRSFTFIQGDICNVADCSASLAGVDVVLHQAALGSVPRSIQDPITTNHANITGFLTL  127
            E++W  F FIQGDI + +DC  +   VD VLHQAALGSVPRS++DPI+TN ANI GFL +
Sbjct  65   EEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNM  124

Query  128  LTTAMHLGVRRFVYAASSSTYGDSPTLPKVEHVIGKPLSPYAVTKYVNELYADVFAKTYG  187
            LT+A +  V  F YAASSSTYGD P LPK+E+ IG+PLSPYAVTKYVNELYADVFA++Y 
Sbjct  125  LTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYE  184

Query  188  MECIGLRYFNVFGRRQSPDGAYAAVIPLWFRGLLQHADIFINGDGMTSRDFCHVDNAVQA  247
             + IGLRYFNVFGRRQ+P+GAY+AVIP W+ +LL++  I+INGDG TSRDFC ++N +QA
Sbjct  185  FNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQA  244

Query  248  NLRSALTENPDALNQVYNVACGKQASLNELYALIQCNVADHTPDATARTPTYRDFRAGDV  307
            NL SA T++  + N+VYNVA G ++SLNELY LI+  +     + +   P Y+DFR GDV
Sbjct  245  NLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDV  304

Query  308  RHSLADIGKARTLLGYEPYYTLEEGLRITAPWYISR  343
            +HS ADI K +T+L+YEP + + EGL+ T  WYI +
Sbjct  305  KHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

85) wbpP in NC_021150


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  338 bits (1270),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 203/356 (58%), Positives = 280/356 (79%), Gaps = 17/356 (4%)

Query  1    MTRYQRLLHDLPQTPATWLITGVAGFIGSNLLETLLGLDQWVVGLDNFSTGHPHNLEEVR  60
            MT Y+ L   L  +P  WLITGVAGFIGS LLE LL L+Q V+GLDNFSTG  HNL++VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   QRTSAPRWARFQLIRGDIRELHDCRQAMTFAAVVPGCRPRPVEHVLHQAALGSVPRSLED  120
               S  +W+RF +I+GDIR + DC++A         C+   V+ VLHQAALGSVPRSL D
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKA---------CKN--VDYVLHQAALGSVPRSLKD  109

Query  121  PIATNASNVDGFLNILVAARDAGVKSFTYAASSAAYGDHPGLPKIEDIVGRPLSPYAVSK  180
            PIATN++N+DGFLN+L AARDA V SFTYAASS++YGDHP+LPKIE+ +GRPLSPYAV+K
Sbjct  110  PIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTK  169

Query  181  YVNELYADAFARNYGLHSIGLRYFNVFGKHQDPEGAYAAVIPKWIAAMLRDEEVFIDGDG  240
            YVNELYAD FAR+Y +++IGLRYFNVFG++Q+P+GAY+AVIP+WI ++L+DE ++I+GDG
Sbjct  170  YVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDG  229

Query  241  STSRDFCHVDNavqan-llaacaeararnqvYNIAVGERSTLQQLFQALRQSLA---KNG  296
            STSRDFC ++N +QAN L A+  +  ++N+VYN+AVG+R++L++L+  +R++L    ++ 
Sbjct  230  STSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQ  289

Query  297  VRYGRAPLHRDFRPGDVRHSLADIGKARRLLGYLPQYDLRTGIAQAMPWYIARNPT  352
             R    P+ +DFR GDV+HS ADI K + +L+Y P++D++ G+ Q++ WYI +++T
Sbjct  290  SR--AEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHST  343

86) wbpP in NC_021149


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  338 bits (1270),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 203/356 (58%), Positives = 280/356 (79%), Gaps = 17/356 (4%)

Query  1    MTRYQRLLHDLPQTPATWLITGVAGFIGSNLLETLLGLDQWVVGLDNFSTGHPHNLEEVR  60
            MT Y+ L   L  +P  WLITGVAGFIGS LLE LL L+Q V+GLDNFSTG  HNL++VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   QRTSAPRWARFQLIRGDIRELHDCRQAMTFAAVVPGCRPRPVEHVLHQAALGSVPRSLED  120
               S  +W+RF +I+GDIR + DC++A         C+   V+ VLHQAALGSVPRSL D
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKA---------CKN--VDYVLHQAALGSVPRSLKD  109

Query  121  PIATNASNVDGFLNILVAARDAGVKSFTYAASSAAYGDHPGLPKIEDIVGRPLSPYAVSK  180
            PIATN++N+DGFLN+L AARDA V SFTYAASS++YGDHP+LPKIE+ +GRPLSPYAV+K
Sbjct  110  PIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTK  169

Query  181  YVNELYADAFARNYGLHSIGLRYFNVFGKHQDPEGAYAAVIPKWIAAMLRDEEVFIDGDG  240
            YVNELYAD FAR+Y +++IGLRYFNVFG++Q+P+GAY+AVIP+WI ++L+DE ++I+GDG
Sbjct  170  YVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDG  229

Query  241  STSRDFCHVDNavqan-llaacaeararnqvYNIAVGERSTLQQLFQALRQSLA---KNG  296
            STSRDFC ++N +QAN L A+  +  ++N+VYN+AVG+R++L++L+  +R++L    ++ 
Sbjct  230  STSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQ  289

Query  297  VRYGRAPLHRDFRPGDVRHSLADIGKARRLLGYLPQYDLRTGIAQAMPWYIARNPT  352
             R    P+ +DFR GDV+HS ADI K + +L+Y P++D++ G+ Q++ WYI +++T
Sbjct  290  SR--AEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHST  343

87) wbpP in NC_012560


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  338 bits (1270),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 203/356 (58%), Positives = 280/356 (79%), Gaps = 17/356 (4%)

Query  1    MTRYQRLLHDLPQTPATWLITGVAGFIGSNLLETLLGLDQWVVGLDNFSTGHPHNLEEVR  60
            MT Y+ L   L  +P  WLITGVAGFIGS LLE LL L+Q V+GLDNFSTG  HNL++VR
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   QRTSAPRWARFQLIRGDIRELHDCRQAMTFAAVVPGCRPRPVEHVLHQAALGSVPRSLED  120
               S  +W+RF +I+GDIR + DC++A         C+   V+ VLHQAALGSVPRSL D
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKA---------CKN--VDYVLHQAALGSVPRSLKD  109

Query  121  PIATNASNVDGFLNILVAARDAGVKSFTYAASSAAYGDHPGLPKIEDIVGRPLSPYAVSK  180
            PIATN++N+DGFLN+L AARDA V SFTYAASS++YGDHP+LPKIE+ +GRPLSPYAV+K
Sbjct  110  PIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTK  169

Query  181  YVNELYADAFARNYGLHSIGLRYFNVFGKHQDPEGAYAAVIPKWIAAMLRDEEVFIDGDG  240
            YVNELYAD FAR+Y +++IGLRYFNVFG++Q+P+GAY+AVIP+WI ++L+DE ++I+GDG
Sbjct  170  YVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDG  229

Query  241  STSRDFCHVDNavqan-llaacaeararnqvYNIAVGERSTLQQLFQALRQSLA---KNG  296
            STSRDFC ++N +QAN L A+  +  ++N+VYN+AVG+R++L++L+  +R++L    ++ 
Sbjct  230  STSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQ  289

Query  297  VRYGRAPLHRDFRPGDVRHSLADIGKARRLLGYLPQYDLRTGIAQAMPWYIARNPT  352
             R    P+ +DFR GDV+HS ADI K + +L+Y P++D++ G+ Q++ WYI +++T
Sbjct  290  SR--AEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHST  343

88) BRPE64_BCDS01860 in NC_021294


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  335 bits (1259),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 196/334 (59%), Positives = 264/334 (80%), Gaps = 2/334 (0%)

Query  23   DLCERLLSGRHRWLVTGAAGFIGSNLVETLLMLDQDVRGMDNFATGHKHNLDEVRKRVGE  82
            +L  +L+ +  RWL+TG AGFIGS L+E LL L+Q V G+DNF+TG +HNLD+VR  V+E
Sbjct  6    ELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE  65

Query  83   TRWSRFSFHEADIRDVAACERAVAEMDFVLHQAALGSVPRSVKDPITTHDINASGFLNML  142
             +WSRF F ++DIR  + C++A  ++D+VLHQAALGSVPRS+KDPI+T+  N  GFLNML
Sbjct  66   EQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNML  125

Query  143  DasrraavrrfvyaasssTYGDEPNLPKREERIGNPLSPYAVTKLVNEIYAGVYARTYGF  202
             A+R A V  F YAASSSTYGD+P+LPK EERIG PLSPYAVTK VNE+YA+V+AR+Y F
Sbjct  126  TAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEF  185

Query  203  ASIGLRYFNVFGPRQDPNGAYAAVIPKWIAAMLAGDEVQINGDGETSRDFCYVGNVVQMN  262
             +IGLRYFNVFG RQ+PNGAY+AVIP+WI ++L ++ + INGDG TSRDFCY+ NV+Q N
Sbjct  186  NAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQAN  245

Query  263  LRAALREDLRTSE-VYNVAVGDRTTLKDLFHVIRDGLGS-RGFAYEKAPVFRDFRAGDVR  320
            L +A  +DL + + VYNVAVGDRT+L++L+ +IRDGL   R       P+++DFR GDV+
Sbjct  246  LLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVK  305

Query  321  HSQADVSKARAELGYAPLLNLRAGMNEALPWYIA  354
            HSQAD++K ++ L+Y P ++++ G++++L WYI 
Sbjct  306  HSQADITKIKTFLSYEPEFDIKEGLKQTLKWYID  339

89) Hoch_5210 in NC_013440


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  335 bits (1257),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 191/340 (57%), Positives = 257/340 (76%), Gaps = 3/340 (0%)

Query  1    MTRYQTISQQLEAEPKRWLITGVAGFIGSALLERLLGLGQDVVGIDNFATGHQHNIDDVL  60
            MT Y+ +  +L   PKRWLITGVAGFIGS+LLE LL L Q V+G+DNF+TG QHN+DDV 
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SQFPD---ARFTFVEGSITDGDACKRACDGVDYVLHQAALGSVPRSINEPRASHHANVNG  117
            +  ++   +RF F++G I     C++AC  VDYVLHQAALGSVPRS+++P A++ AN++G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  118  FLELMLSARDAGVKRAVYASSSSVYGDHPGLPKVEERIGRQLSPYAITKRVDELYAGVIQ  177
            FL+++ +ARDA V    YA+SSS YGDHP+LPK+EERIGR LSPYA+TK V+ELYA+V+ 
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  178  DCYGTEIIGLRYFNVFGRRQDPLGAYAAVIPRWVDALLGGRGCQIFGDGSNSRDFCYVDN  237
              Y  + IGLRYFNVFGRRQ+P GAY+AVIPRW+ +LL +    I GDGS SRDFCY++N
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  238  AVQANILAATTGGPEVTNTVYNVGCGGRTTLVELFEYIRDGLAEMHPEVADAQPEFTEPR  297
             +QAN+L+ATT +    N VYNV+ G+RT+L EL+  IRDGL   + E + A+P + + R
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  298  AGDVLHSQANIDKIREKLGYEHTHEIREGLRETVHWFAER  337
             GDV HSQA+I KI+  L+YE   +I+EGL++T+ W+ ++
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

90) Sfum_3358 in NC_008554


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  315 bits (1181),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 180/338 (54%), Positives = 239/338 (71%), Gaps = 0/338 (0%)

Query  1    MSAMEAATESLRQSPRTWLVTGVAGFIGSNLLERLLQLDQRVVGLDNFFSGSPRNLAEVK  60
            M+A E     L  +P+ WL+TGVAGFIGS LLE LL L+Q V+GLDNF +G  +NL +V+
Sbjct  1    MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVR  60

Query  61   SSVGPGKWERFTFAEGDVRDPKACLEACRGVDYVLHQAGFCSVPASIDEPALCNEVNVCG  120
            +SV+  +W RF F +GD+R    C  AC+ VDYVLHQA++ SVP S+ +P   N  N+ G
Sbjct  61   TSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDG  120

Query  121  TVNMLTAARDLGVGRFVYASSSSVYGDSPELPEKEEVIGRPLSPYSVTKRTGELYAAAFA  180
             +NMLTAARD  V+ F YA+SSS YGD P+LP  EE IGRPLSPY+VTK   ELYA  FA
Sbjct  121  FLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFA  180

Query  181  ATCGLEAVGLRYFNVFGPRQAAGGAYGAVIPAWISAMIRGEACFINGTGETSRDFCYVEN  240
             +  ++A+GLRYFNVFG RQ + GAY+AVIP WI +++++E+ +ING G TSRDFCY+EN
Sbjct  181  RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240

Query  241  AVQANLLAATTGNAQAVNQVYNVAFGESTSLNELFQMLLDRLSPHNARLEDYRPVHRDFR  300
             +QANLL+ATT +  + N+VYNVA G+ TSLNEL+ ++ D L+          P+ +DFR
Sbjct  241  VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFR  300

Query  301  PGDIMHSVADIGRARELLGYEPTHDVAAGLDAALEWYT  338
             GD+ HS ADI + + +L+YEP  D+  GL  +L WY 
Sbjct  301  DGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI  338

91) AnaeK_4420 in NC_011145


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  309 bits (1158),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 179/336 (54%), Positives = 251/336 (75%), Gaps = 0/336 (0%)

Query  3    TTYDHVCEDLRAAPRRWLVTGGAGFIGSHLVQKLLSLRQDVIVLDDLSTGHLSNLDDATK  62
            T+Y+++   L  AP+RWL+TG AGFIGS L++ LL L Q VI LD++STG   NLDD   
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  63   SVREDLRGTLTFIKGDIRDLATCLRACAGVDLVLHQAALGSVPRSLKDPRTSHDVNVTGA  122
            SV E+ ++ + FI+GDIR ++ C +AC  VD VLHQAALGSVPRSLKDP +++  N+ G 
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  123  MNVFLAARDSGARRLVYASSSSVYGDHPALPKVEDQVGKQLSPYAVTKYANELYAHVFGQ  182
            +N++ AARD+    + YA+SSS YGDHP LPK+E+++G+ LSPYAVTKY NELYA+VF++
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  183  AYGLELIGLRYFNVFGPRQDPNGPYAAVMPQWFAGLLSGTEVVINGDGETTRDFCYvana  242
            +Y ++ IGLRYFNVFG RQ+PNG+Y+AV+P+W+ +LL +  + INGDG T+RDFCY+ N 
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  243  vqanllaattSDREAVGRTYNVACGAQTSLNTLFELIRTEVARVRPEAANASPAYKPFRP  302
            +QANLL+ATT+D  +  + YNVA G +TSLN L+ LIR  +   R E + A P YK FR 
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRD  301

Query  303  GDIRHSLANVDRARALLGYVPTHDVAAGLREAAAWY  338
            GD++HS A++ + +++L+Y P  D+  GL+++  WY
Sbjct  302  GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

92) FB2170_10016 in NC_014472


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  304 bits (1140),  Expect = 5e-84, Method: Compositional matrix adjust.
 Identities = 181/319 (57%), Positives = 244/319 (77%), Gaps = 6/319 (1%)

Query  15   LVTGGAGFIGSNLCEVLLSNKNRVTCLDNFSTGKRENLDHLISD------KKFRLIEGDI  68
            L+TG AGFIGS L E LL  ++ V  LDNFSTG ++NLD++ +        +F +I+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RNIKDCQEACSSVDYVLHQAALGSVPRSINDPITSNDVNVSGFLNMLVAARDANVKRFIY  128
            R++ DCQ AC +VDYVLHQAALGSVPRS++DPI++N  N+ GFLNML AARDA+V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  AASSSTYGDSKNMPKVEEVIGKPLSPYAITKYVNELYADIFSKSFGLETIGLRYFNVFGR  188
            AASSSTYGD  ++PK+EE IG+PLSPYA+TKYVNELYAD+F++S+ +++IGLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFVMQLMKHESPVINGDGSYSRDFTYIDNVVEMNIRSMLVTNIEAVN  248
            RQ+PNGAY+AVIP+ ++ L+K+E+  INGDGS SRDF YI+NV++ N+ S    ++ + N
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  249  TVYNVAFGERTDLNELIGLLKNYLSVFDENIKNISVVHGATRQGDVPHSLASIDKAKKLL  308
             VYNVA G+RT LNEL  L+++ L++  ++      +    R+GDV HS A I K K +L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  309  GYDPKFDIKAGLKEAVDWY  327
            +Y+P FDIK GLK+++ WY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

93) Celal_3144 in NC_014934


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  299 bits (1119),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 178/319 (56%), Positives = 239/319 (75%), Gaps = 6/319 (1%)

Query  15   LVTGGAGFIGSNICESLLSNGNKVTCLDNFSTGKRENIQPLLLN------SNFTLIEGDI  68
            L+TG AGFIGS + E LL   + V  LDNFSTG ++N++ +  +      S F +I+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RKLEDCLTACKDVDFVLHEAALGSVPRSINDPITSNDVNVSGFLNMLVAARDSKVKRFIF  128
            RK+ DC  ACK+VD+VLH+AALGSVPRS++DPI++N  N+ GFLNML AARD+ V  F +
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  AASSSTYGDSESLPKIEDNIGKPLSPYAITKYVNELYAEIFSKTYGLETIGLRYFNVFGR  188
            AASSSTYGD   LPKIE+ IG+PLSPYA+TKYVNELYA++F+++Y +++IGLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  KQDPNGAYAAVIPKFVIQLLNHESPTINGDGSYSRDFTYIDNVIEMNVRAITTTNSDAIN  248
            +Q+PNGAY+AVIP+ ++ LL++E+  INGDGS SRDF YI+NVI+ N+ + TT +  + N
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  249  TVYNTAFGERTDLTELITLLKEYLGKFDNKINNIEIKYGPNRQGDVPHSLASIDKAKKLL  308
             VYN A G+RT L EL  L+++ L    N  +  E  Y   R+GDV HS A I K K +L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  309  QYDPKFDIKQGLKEAVNWY  327
             Y+P FDIK+GLK++++WY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

94) Trad_0292 in NC_014221


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  298 bits (1115),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 171/344 (50%), Positives = 249/344 (73%), Gaps = 2/344 (0%)

Query  9    TTYHLLQERLRRAPRTWLVTGAAGFIGSHLLETLLKLEQRVVGLDNFATGHRHNLDEVQR  68
            T+Y+ L+ +L  AP+ WL+TG AGFIGS LLE LL L+Q V+GLDNF+TG +HNLD+V+ 
Sbjct  2    TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT  61

Query  69   AVGEAAWSRLRFIEGDISDLATCREALAGVDAVLHQAAFVSVPGSIEDPLLNHRSNVTGF  128
            +V+E  WSR+ FI+GDI  ++ C+ A   VD VLHQAA+ SVP S+ DP+  + +N+ GF
Sbjct  62   SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGF  121

Query  129  LNLLVAAQERGLKRFVYASSSAVYGNAETLPAREEAVGDALSPYAASKAMDELYAGVFTR  188
            LN+L AA++  +  F YA+SS+ YG+   LP  EE +G +LSPYA +K ++ELYA+VF+R
Sbjct  122  LNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181

Query  189  LHGLEAIGLRYFNIFGPRQDPNGAYAAVIPKWTARLLSGQRGVIFGDGSATRDFCFVGNV  248
               ++AIGLRYFN+FG RQ+PNGAY+AVIP+W   LL ++   I GDGS++RDFC++ NV
Sbjct  182  SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241

Query  249  VQANVLAATTENPAAFGEVFNVGNGGATTTRALYETLRDRLAEVTGREDLRRLEPRFDPP  308
            +QAN+L+ATT++ A+   V+NV+ G+ T+   LY  +RD L     R++  R EP +   
Sbjct  242  IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLN--LWRNEQSRAEPIYKDF  299

Query  309  RPGDIAHSRADISRAQRLLGFEPDVSVEEGLRRTLAWYAARAQT  352
            R GD+ HS+ADI++ + +L++EP+  + EGL++TL WY  +  T
Sbjct  300  RDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHST  343

95) ZPR_2256 in NC_014041


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  296 bits (1109),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 180/325 (56%), Positives = 238/325 (74%), Gaps = 6/325 (1%)

Query  10   LTGSTVLVTGGAGFIGSNLCKSLLDLNARVICLDNFSTGKKANLNLFK------DHQNFA  63
            L+    L+TG AGFIGS L   LL LN  VI LDNFSTG + NL+  +      +   F 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  64   LIEADIRDADACLRACKNVDYILHQAALGSVPRSIKDPQTTNAVNINGFLNMLVAAKENQ  123
            +I++DIR    C +ACKNVDY+LHQAALGSVPRS+KDP +TN+ NI+GFLNML AA++ +
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  124  VKRFIYAASSSTYGDAAALPKVEDHIGKPLSPYAITKYVNELYADVFQKTYGLNSIGLRY  183
            V  F YAASSSTYGD + LPK+E++IG+PLSPYA+TKYVNELYADVF ++Y +N+IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  184  FNVFGRHQDPDGAYAAVIPKFVKKLMNHRSPVINGDGSFSRDFTYIDNVIQANLLAMLTE  243
            FNVFGR+Q+P+GAY+AVIP+ +  L+++ +  INGDGS SRDF YI+NVIQANLL+  T+
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  244  TPEAVNQIYNIACGERTDLNQLVEILKAELYKFDPEILDISAKYGPARQGDVPHSQASIE  303
               + N++YN+A G+RT LN+L  +++  L     E     + Y   R+GDV HSQA I 
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  304  KAKKLLEYQPEFSVKAGLAEAVSWY  328
            K K +L Y+PEF +K GL +++ WY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

96) Swit_1202 in NC_009511


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  296 bits (1107),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 181/332 (55%), Positives = 239/332 (72%), Gaps = 2/332 (0%)

Query  30   DLDRMLRSRQARWLVTGAAGFIGSHLVQTLLAAGQSVRGLDNFATGHRSNLENVREQVGE  89
            +L   L     RWL+TG AGFIGS L++ LL   Q+V GLDNF+TG + NL++VR  V+E
Sbjct  6    ELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE  65

Query  90   DAWARFDFIEGDIRDRADCAAAVAGIDHVLHQAALGSVPRSIADPLSSHDTNATGFANII  149
            + W+RF FI+GDIR  +DC  A   +D VLHQAALGSVPRS+ DP++++ +N  GF N++
Sbjct  66   EQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNML  125

Query  150  DAARLAGVGSFVYASSSSVYGDEPNLPKVEGRIGRVLSPYALTKLHNELVAEVYRRNYGF  209
             AAR A V+SF YA+SSS YGD+P+LPK+E RIGR LSPYA+TK  NEL A+V+ R+Y F
Sbjct  126  TAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEF  185

Query  210  GSVGLRYFNVFGPRQDPNGAYAAVIPRWTAAMIAGEPVLINGDGETSRDFCYVANAVQAN  269
             ++GLRYFNVFG RQ+PNGAY+AVIPRW  +++ +EP+ INGDG TSRDFCY+ N +QAN
Sbjct  186  NAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQAN  245

Query  270  -LRAALFAPAGEAHLLNVAVGDRTTLSELFallrdalrrdGVVYDRPAE-HGDFRVGDVR  327
             L A+    A+   + NVAVGDRT+L+EL+ L+RD+L        R+     DFR GDV+
Sbjct  246  LLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVK  305

Query  328  HSLADIGAAAELVGYAPTHRIAEGLDEALPWY  359
            HS ADI     +++Y P   I EGL ++L WY
Sbjct  306  HSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

97) GFO_2041 in NC_008571


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  294 bits (1100),  Expect = 6e-81, Method: Compositional matrix adjust.
 Identities = 174/325 (54%), Positives = 230/325 (71%), Gaps = 6/325 (1%)

Query  10   ISASKILVTGGAGFIGSNLCETLIGLGAKVRCLDNFATGHRKNLDPII------ENSSFE  63
            +++ + L+TG AGFIGS L E L+ L   V  LDNF+TG + NLD +       + S F 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  64   LIEGDIRDIDTCKMACEGIDYVLHEAALGSVPRSLKDPKTSNDVNVSGFLNMLIAVKESE  123
            +I+GDIR +  C+ AC  +DYVLH+AALGSVPRSLKDP ++N  N+ GFLNML A ++++
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  124  VKRFVYAASSSTYGDSEKLPKIEDEIGKPLSPYAITKYVNELYADIFHKSYGVDSIGLRY  183
            V  F YAASSSTYGD   LPKIE+ IG+PLSPYA+TKYVNELYAD+F +SY  ++IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  184  FNVFGRKQDPNGAYAAVIPKFVMQFMKHESPVINGDGTYSRDFTYIDNVIQMNLLAIVTG  243
            FNVFGR+Q+PNGAY+AVIP+ ++ ++K+E+  INGDG+ SRDF YI+NVIQ NLL+  T 
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  244  NPEAVNEVYNTAVGDRTDLVELTQILKKHLSEFDPEIKNIEVKHGPNRAGDIPHSLASVD  303
            +  + N VYN AVGDRT L EL  +++  L+    E    E      R GD+ HS A + 
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  304  KAKNLLDYKPTHAIDEGLNEAVKWY  328
            K K +L Y P   I EGL++++KWY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

98) KQS_03270 in NC_017025


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  293 bits (1097),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 184/325 (57%), Positives = 242/325 (75%), Gaps = 6/325 (1%)

Query  5    IKNKKILITGGAGFIGSNLCDYFLNNQNQIICLDNFSTGFKNNIEPFLKN------SNFK  58
            +  K+ LITG AGFIGS L + +L  ++ +I LDNFSTG+++N++    +      S F 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  59   LIEGDIRNFETCQKAVENVDYVLHQAALGSVPRSINDPITSNDVNISGFLNMLVASRDAK  118
            +I+GDIR+F  CQKA  NVDYVLHQAALGSVPRS++DPI++N  NI GFLNML A+RDA 
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  119  VKRFVYAASSSTYGDSEKLPKIENVIGKPLSPYAITKYVNELYADVFSKTYGMETIGLRY  178
            V  F YAASSSTYGD   LPKIE+ IG+PLSPYA+TKYVNELYADVF+++Y  ++IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  179  FNVFGRNQNPNGAYAAVIPKFISLFINHESPIINGDGNFSRDFTYIDNVIQMNELALQTQ  238
            FNVFGR QNPNGAY+AVIP+ I  ++++E+  INGDG+ SRDF YI+NVIQ N L+  T+
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  239  NPNAINQVYNTAFGERTTLNELIQYIKENLIQFDPEIEQISVAYGPNRSGDIPHSLADIS  298
            +  + N+VYN A G+RT+LNEL   I++ L     E  +    Y   R GD+ HS ADI+
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  299  KGKELLGYQPKYSVKEGLKEAIKWY  323
            K K +L+Y+P + +KEGLK+++KWY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

99) Celly_2640 in NC_015167


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  293 bits (1096),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 178/319 (56%), Positives = 238/319 (75%), Gaps = 6/319 (1%)

Query  15   LVTGGAGFIGSNICESLLANGNRVTCLDNFATGKKENISHLL------KHKNFSLITGDI  68
            L+TG AGFIGS + E LL   + V  LDNF+TG ++N+ ++       +   F +I GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RNINDCKVACKSVDFILHQAALGSVPRSINDPITSNDVNVSGFLNMLVAARDAKVKRFVF  128
            R++ DC+ ACK+VD++LHQAALGSVPRS++DPI++N  N+ GFLNML AARDA V  F +
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  AASSSTYGDSTDLPKIENVIGKPLSPYAITKYVNELYADVFSKTYGMETIGLRYFNVFGR  188
            AASSSTYGD  DLPKIE+ IG+PLSPYA+TKYVNELYADVF+++Y  ++IGLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  KQDPNGAYAAVIPKFVMQFMSHKSPTINGDGSFSRDFTYIDNVIEMNVRALTTNNKKALN  248
            +Q+PNGAY+AVIP+ ++ ++ + +  INGDGS SRDF YI+NVI+ N+ + TTN+  + N
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  249  TIYNVAYGERTNLNELVNLLRDNLSEFDPKIKDIKIEYGATRQGDVPHSLASIEKAKNLL  308
             +YNVA G+RT+LNEL  L+RD L+            Y   R+GDV HS A I K K +L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  309  GYNPQFDIKKGLKEAVTWY  327
            +Y+P+FDIK GLK+++ WY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

100) Fjoh_0359 in NC_009441


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  289 bits (1082),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 179/319 (57%), Positives = 238/319 (75%), Gaps = 6/319 (1%)

Query  10   LITGGAGFIGSNLSEHFLGLGHKVICLDNFSTGHRHNLKDFIEN------PNYKLIEGDI  63
            LITG AGFIGS L E++L L + VI LDNFSTG +HNL D   +      + + +I+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  64   RNLEDCTKAVQGVDYVLHQAALGSVPRSINDPITTNEVNVSGFLNMLVASRDAKIKRFIY  123
            R++ DC KA + VDYVLHQAALGSVPRS++DPI+TN  N+ GFLNML A+RDA +  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  124  AASSSTYGDSEGLPKVEEVIGKPLSPYAITKYVNELYAEIFSRTYGLETIGLRYFNVFGR  183
            AASSSTYGD  +LPK+EE IG+PLSPYA+TKYVNELYA++F+R+Y +++IGLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  184  KQDPDGAYAAVIPKFVRQLINLESPLINGDGNYSRDFTYIDNVIQMNELAINTKDSAAIN  243
            +Q+P+GAY+AVIP+ +  L++ E+  INGDG+ SRDF YI+NVIQ N L+  T+D A+ N
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  244  TVYNTAFGDRNTLNDLVKYLKQYLSEFDPNIADVEISYGLNRVGDIPHSLASIEKAKKML  303
             VYN A GDR +LN+L   +++ L+    + +  E  Y   R GD+ HS A I K K  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  304  GYKPEFSLQDGLKEAVSWY  322
            +Y PEF +++GLK+++ WY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

101) Fleli_1429 in NC_018018


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  287 bits (1076),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 181/325 (56%), Positives = 243/325 (75%), Gaps = 6/325 (1%)

Query  6    LTSKKILITGGAGFIGSNLCEKFLAQNNTVICLDNFSMGRRENIEHLLEN------PNFT  59
            L++K+ LITG AGFIGS L E +L  N+TVI LDNFS G ++N++++  +      + F 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  60   LIEGDIRKLEDCKKAVVGVEVILHQAALGSVPRSIADPITSNDVNISGFVNVLVAAKEEG  119
            +I+GDIRK+ DC+KA   V+ +LHQAALGSVPRS+ DPI++N  NI GF+N+L AA++  
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  120  VKRIVYAASSSTYGDHKALPKIEENIGRPLSPYAVTKYVNELYANVFSDLYGLEIIGLRY  179
            V  + YAASSSTYGDH  LPKIEE IGRPLSPYAVTKYVNELYA+VF+  Y ++ IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  180  FNVFGRKQRPDGAYAAVIPKFIGLLMEHERPTIFGDGEFSRDFTYIENVLQANELAATTT  239
            FNVFGR+Q P+GAY+AVIP+ I  L+ +E   I GDG  SRDF YIENV+QAN L+ATT 
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  240  NLEAINQVYNVAFGERTTVTEMFELMRSLLSKYDSKISEVEAIYGDNRQGDIPHSLASIE  299
            +L + N+VYNVA G+RT++ E++ L+R  L+   +  S  E+IY D R+GD+ HS A I 
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  300  KAKNLLGYNPQYSFKKGLTEAIEWY  324
            K K +L+Y+P++ +K GL +++ WY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

102) wbpP in NC_015844


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  286 bits (1071),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 172/319 (54%), Positives = 236/319 (74%), Gaps = 6/319 (1%)

Query  15   LVTGGAGFIGSNLCEALLDNGNRVVCLDNFATGKRENILPFTSN------PNFSLIEGDI  68
            L+TG AGFIGS L E LL   + V+ LDNF+TG ++N+    ++      + F +I+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLSTCHKACADVDFILHQAALGSVPRSINDPITSNDVNVSGFLNMLVAARDAKVKRFVY  128
            R ++ C+KAC +VD++LHQAALGSVPRS++DPI++N  N+ GFLNML AARDA V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  AASSSTYGDSKSMPKVEDVIGKPLSPYAITKYVNELYANIFSSTYGLETIGLRYFNVFGQ  188
            AASSSTYGD   +PK+E+ IG+PLSPYA+TKYVNELYA++F+ +Y +++IGLRYFNVFG+
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFTMQLMAHESPVINGDGSFSRDFTYIDNVVQMNIRALLAKDKEAIN  248
            RQ+PNGAY+AVIP+  + L+ +E+  INGDGS SRDF YI+NV+Q N+ +  ++D  + N
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  249  TVYNVAFGERTDLNELVSLLKTYLSEFDPQIANIDITYGPERKGDVPHSLASIEKAEKLL  308
             VYNVA G+RT LNEL  L++  L+    + +  +  Y   R GDV HS A I K   +L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  309  GYAPQFDIKTGLKNAVNWY  327
            +Y P+FDIK GLK++++WY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

103) FIC_00329 in NC_013062


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  279 bits (1044),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 172/322 (54%), Positives = 234/322 (73%), Gaps = 6/322 (1%)

Query  2    KNILITGGAGFIGSNLCDHFIAKGYKVTCLDSFITGHRRNLIQLM------EHPDFTLIE  55
            K  LITG AGFIGS L ++++     V  LD+F TG ++NL ++       + + F +I+
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  56   GDIREIETCRKACEGMDYVLHQAALGSVPRSINDPITSNDVNVGGFLNMLVAARDAKVKR  115
            GDIR +  C+KAC  +DYVLHQAALGSVPRS++DPI++N  N++GFLNML AARDA V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  116  FVYAASSSTYGDSASLPKVEDVIGKPLSPYAVTKYVNELYADVFSKTYGIECIGLRYFNV  175
            F YAASSSTYGD + LPK+E+ IG+PLSPYAVTKYVNELYADVF+++Y ++ IGLRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  176  FGRRQDPNGAYAAVIPKFVIQLMKHQSPTINGAGDYSRDFTYIDNVIQMNERAMLTDNHD  235
            FGRRQ+PNGAY+AVIP+ ++ L+K+++  ING G  SRDF YI+NVIQ N  +  T++  
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  236  AVNTVYNTAVGDRTTIREMADLLKEYLSAYDPEIGNIEILHGPVRTGDVPHSKASIEKAM  295
            + N VYN AVGDRT++ E+  L+++ L+    E +  E +    R GDV HS+A I K  
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  296  NLLNYSPSHVFKHGLKEAVDWY  317
             +L+Y P   +K+GLK+++ WY
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWY  337

104) Niako_5358 in NC_016609


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 174/325 (54%), Positives = 237/325 (73%), Gaps = 22/325 (6%)

Query  16   FLVTGGAGFIGSNIVEYLLAHGVGKVRVLDNFSTG---SMENIEPFLA---RPEFSLIEG  69
             L+TG AGFIGS ++E LL      V  LDNFSTG   +++++   ++   ++ F +I+G
Sbjct  18   WLITGVAGFIGSGLLEELLFLN-QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  70   DIRDLDTCRRAVDGVDYVLHQAALGSVPRSINDPITSNEVNVSGFLNMLVAARDAGVKRM  129
            DIR +  C++A   VDYVLHQAALGSVPRS++DPI++N  N+ GFLNML AARDA V   
Sbjct  77   DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF  136

Query  130  VYAASSSTYGDHPGLPKVEDKIGNPLSPYAVTKYVNELYASVFSRTYDFHTIGLRYFNVF  189
             YAASSSTYGDHP+LPK+E++IG PLSPYAVTKYVNELYA VF+R+Y+F++IGLRYFNVF
Sbjct  137  TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVF  196

Query  190  GPRQNPRGPYAAVIPLFVQSALKNEAPYINGDGETSRDFTFVENAVQANIKAALAPDI-N  248
            G RQNP G+Y+AVIP  + S LK+E+ YINGDG TSRDF ++EN +QAN+ +A + D+ +
Sbjct  197  GRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLAS  256

Query  249  KHEVVNIAVGDKTTLNE----------LWKHITAFIGIDLAPKYREERKGDVRHSLADVS  298
            K+ V N+AVGD+T+LNE          LW++  +       P Y++ R GDV+HS AD++
Sbjct  257  KNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQS----RAEPIYKDFRDGDVKHSQADIT  312

Query  299  KAHQLIGYQPVVTIQTGLQTTVEWY  323
            K   +++Y+P   I+ GL+ T+ WY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

105) Krodi_2791 in NC_015496


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  278 bits (1040),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 168/325 (52%), Positives = 234/325 (72%), Gaps = 6/325 (1%)

Query  9    VEGKKVLVTGGAGFIGSNICEVLIEHGAIVTCLDNLATGHKHNLDAIMSN------PNFT  62
            +  K+ L+TG AGFIGS + E L+     V  LDN++TG +HNLD + ++      + F 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  63   FIEGDIRDINVCKSGVSNCDYVLHQAALGSVPRSIQDPATSNEVNVGGFLNMLIASKDKG  122
            FI+GDIR +  C+ +  N DYVLHQAALGSVPRS++DP ++N  N++GFLNML A++D  
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  123  VKRFVYAASSSTYGDSQGLPKQEDIIGKPLSPYAITKYVNELYADVFHKTYGLDCIGLRY  182
            V  F YAASSSTYGD  +LPK E+ IG+PLSPYA+TKYVNELYADVF ++Y ++ IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  183  FNVFGRKQDPNGAYAAVIPKFTKLLMDHESPVMNGDGTFSRDFTYIDNVIQMNIRAMLTE  242
            FNVFGR+Q+PNGAY+AVIP+    L+ +E+  +NGDG+ SRDF YI+NVIQ N+ +  T+
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  243  NEEAMNTVYNVAYGERTDLNELVAILKTELSQFDSEIADVEIKFGPKRAGDVPHSLASID  302
            +  + N VYNVA G+RT LNEL  +++  L+   +E +  E  +   R GDV HS A I 
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  303  RARSRVGYDPQFSIKDGLKEAMAWY  327
            + ++ ++Y+P+F IK+GLK+++ WY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

106) CA2559_13088 in NC_014230


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 172/327 (53%), Positives = 235/327 (72%), Gaps = 10/327 (3%)

Query  11   LKGAKILITGGAGFIGSNLCE--FFLKQNAIVTCLDNFATGHKHNIAHLMT------HEN  62
            L   + LITG AGFIGS L E  +FL+Q  I   LDNF+TG +HN+ ++ T         
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIG--LDNFSTGYQHNLDDVRTSVSEEQWSR  70

Query  63   FSLVEGDIRDVETCQNAANGQDYILHQAALGSVPRSINDPITSNDVNVGGFLNMLIAARD  122
            F +++GDIR    CQ+A +  DY+LHQAALGSVPRS++DPI++N  N++GFLNML AARD
Sbjct  71   FIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARD  130

Query  123  QKVKRFTYAASSSTYGDSVKLPKIEEEIGQPLSPYAITKYVNELYATNFKLTYGLDTVGL  182
              V  FTYAASSSTYGD   LPKIEE IG+PLSPYA+TKYVNELYA  F  +Y ++++GL
Sbjct  131  AHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGL  190

Query  183  RYFNVFGRKQDPKGAYAAVIPKFVIQFMNHESPTINGDGTFSRDFTYIDNVIQMNMLTIT  242
            RYFNVFGR+Q+P+GAY+AVIP+ ++ ++++E+  INGDG+ SRDF YI+NVIQ N+L+ T
Sbjct  191  RYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSAT  250

Query  243  TDNEDALNKVYNTAVGDRTTIKDVATQLRKQLSKFDTKIKEVEILNGPIRKGDVPHSLAS  302
            T++  + NKVYN AVGDRT+++++   +R  L+         E +   +R GDV HS A 
Sbjct  251  TNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQAD  310

Query  303  IDKAKRLLDYKPTHEFNDGLKEAVDWY  329
            I K K +L Y P  ++++GLK+++ WY
Sbjct  311  ITKIKTFLSYEPEFDIKEGLKQTLKWY  337

107) G148_0865 in NC_020125


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  276 bits (1034),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 173/325 (54%), Positives = 235/325 (73%), Gaps = 6/325 (1%)

Query  1    MSNRKILITGGAGFIGSNLTEHFLSKNYQVRVLDNFSTGHKYNIEPFFKN------EKFE  54
            ++ ++ LITG AGFIGS L E++L  N  V  LDNFSTG + N++    +       +F 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  55   LIEGDIRNLEICNEACEGVDYVLHQAALGSVPRSIENPITSNEVNVSGFLNMLVAARDAK  114
            +I+GDIR++  C+ AC  VDYVLHQAALGSVPRS+ +PI++N  N+ GFLNML AARDA 
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  115  VKRFVYAASSSTYGDSQSLPKVEEVIGKPLSPYAITKYVNELYADVFSRTYGMECIGLRY  174
            V  F YAASSSTYGD   LPK+EE IG+PLSPYA+TKYVNELYADVF+R+Y  + IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  175  FNVFGRRQDPKGAYAAVIPKFVIQLMNYQSPTINGNGSYSRDFTYIDNVIQMNELAMLTD  234
            FNVFGRRQ+P+GAY+AVIP+ ++ L++ ++  ING+GS SRDF YI+NVIQ N L+  T+
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  235  NPEAVNTVYNTAVGDRTTIKQMAELLKEYLSKYDEKIGEVEILHGPNRIGDIPHSLASID  294
            +  + N VYN AVGDRT+++++  L+++ L+   +  +  E +    R GD+ HS A I 
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  295  KAKEHLGYAPTYVFEEGLKEAVDWY  319
            K K  L+Y P + + EGLK+++ WY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

108) BDI_0026 in NC_009615


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  275 bits (1028),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 178/322 (56%), Positives = 241/322 (75%), Gaps = 4/322 (1%)

Query  2    NKILVTGGAGFIGSNLCEHLLAHNYEVVCLDNFATGKPENV----FPLLERYSEKFKLIV  57
            ++ L+TG AGFIGS L E+LL  N  V+ LDNF+TG  +N+     ++ E    +F +I 
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  58   GDIRVLADCRKAVEGVDYVMHEAALGSVPRSIKDPITTNDTNISGFLNMLVTARDAGVKR  117
            GDIR ++DC+KA   VDYV+H+AALGSVPRS+KDPI+TN +NI GFLNML +ARDA V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  118  FIYAASSSTYGDSKSLPKVEDVIGKPLSPYAITKYVNELYADVFAKTYGMECIGLRYFNV  177
            F YAASSSTYGD   LPK+E+ IG+PLSPYA+TKYVNELYADVFA++Y  + IGLRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  178  FGRRQDPFGAYAAVIPLFVKKLMAHESPVINGDGEYSRDFTYIDNVVQMNMLAMTTNNKN  237
            FGRRQ+P GAY+AVIP  +  L+ +E+  INGDG  SRDF YI+NV+Q N+L+ TTN+  
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  238  AVNQIYNTAYGERTTLNQLVGYLKEFLSEFDSEIIQVEVIHGPNRLGDIPHSLACIDKAK  297
            + N++YN A G+RT+LN+L   +++ L+   +E  + E I    R GD+ HS A I K K
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  298  SLLGYNPQYSMREGLKEAVKWY  319
            ++L+Y+P++ ++EGLK+++KWY
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWY  337

109) B739_1126 in NC_018609


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  275 bits (1028),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 175/325 (54%), Positives = 234/325 (72%), Gaps = 6/325 (1%)

Query  1    MNNRKILITGGAGFIGSNLTEHFLSKNYQVRVLDNFSTGHKYNIEPFFKN------EKFE  54
            +  ++ LITG AGFIGS L E++L  N  V  LDNFSTG + N++    +       +F 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  55   LIEGDIRNLEICNEACEGVDYVLHQAALGSVPRSIENPITSNEVNVSGFLNMLVAARDAK  114
            +I+GDIR++  C+ AC  VDYVLHQAALGSVPRS+ +PI++N  N+ GFLNML AARDA 
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  115  VKRFVYAASSSTYGDSQSLPKVEEVIGKPLSPYAITKYVNELYADVFSRTYGMECIGLRY  174
            V  F YAASSSTYGD   LPK+EE IG+PLSPYA+TKYVNELYADVF+R+Y  + IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  175  FNVFGRRQDPKGAYAAVIPKFVIQLMNYQSPTINGDGSYSRDFTYIDNVIQMNELAMLTD  234
            FNVFGRRQ+P+GAY+AVIP+ ++ L++ ++  INGDGS SRDF YI+NVIQ N L+  T+
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  235  NPEAVNTVYNTAVGDRTTIKQMAQLLKEYLSKYDEKIGEVEILHGPNRVGDIPHSLASID  294
            +  + N VYN AVGDRT+++++  L+++ L+   +  +  E +    R GD+ HS A I 
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  295  KAKENLGYMPSHIFKEGLKEAVDWY  319
            K K  L+Y P   +KEGLK+++ WY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

110) RIA_1491 in NC_017569


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  275 bits (1027),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 174/325 (54%), Positives = 234/325 (72%), Gaps = 6/325 (1%)

Query  1    MSNRKILITGGAGFIGSNLTEHFLSKNYQVRVLDNFSTGHKYNIEPFFKN------EKFE  54
            ++ ++ LITG AGFIGS L E++L  N  V  LDNFSTG + N++    +       +F 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  55   LIEGDIRNLEICNEACEGVDYVLHQAALGSVPRSIENPITSNEVNVSGFLNMLVAARDAK  114
            +I+GDIR++  C+ AC  VDYVLHQAALGSVPRS+ +PI++N  N+ GFLNML AARDA 
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  115  VKRFVYAASSSTYGDSQSLPKVEEVIGKPLSPYAITKYVNELYADVFSRTYGMECIGLRY  174
            V  F YAASSSTYGD   LPK+EE IG+PLSPYA+TKYVNELYADVF+R+Y  + IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  175  FNVFGRRQDPKGAYAAVIPKFVIQLMNYQSPTINGDGSYSRDFTYIDNVIQMNELAMLTD  234
            FNVFGRRQ+P+GAY+AVIP+ ++ L++ ++  INGDGS SRDF YI+NVIQ N L+  T+
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  235  NPEAVNTVYNTAVGDRTTIKQMAELLKEYLSKYDEKIGEVEILHGPNRIGDIPHSLASID  294
            +  + N VYN AVGDRT+++++  L+++ L+   +  +  E +    R GD+ HS A I 
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  295  KAKEHLGYAPTHVFEEGLKEAVDWY  319
            K K  L+Y P   + EGLK+++ WY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

111) FCOL_03635 in NC_016510


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  273 bits (1023),  Expect = 7e-75, Method: Compositional matrix adjust.
 Identities = 166/325 (52%), Positives = 233/325 (72%), Gaps = 6/325 (1%)

Query  1    MKIVITGCAGFIGSNLTEHFLNKGYQLVGLDNLATGHLKNIQDFMLN------KNFQFVK  54
             + +ITG AGFIGS L E++L     ++GLDN++TG   N++D   +        F F++
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  55   GDIRDIEICKKVCDGADYVLHQAALGSVPRSIKDPLTSNDVNVNGFLNMLWAAKEAGVKR  114
            GDIR +  C+K C   DYVLHQAALGSVPRS+KDP+++N  N++GFLNML AA++A V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  115  FVYAASSSTYGDSESLPKIEEVIGKPLSPYAITKYVNELYADIFGKIYGIETIGLRYFNV  174
            F YAASSSTYGD   LPKIEE IG+PLSPYA+TKYVNELYAD+F++ Y +++IGLRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  175  FGRKQDPNGAYAAVIPKFVMQFMKYESPVVNGDGNYSRDFTYIDNVIQMNELAMLTQDSR  234
            FGR+Q+PNGAY+AVIP+ ++ ++K E+  +NGDG+ SRDF YI+NVIQ N L+  T+D  
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  235  AINTVFNTAFGERTTLNQMISILQKELVKIDSKIADVKVVYGSTRAGDIPHSLASIDKAK  294
            + N V+N A G+RT+LN++  +++  L    +  +    +Y   R GD+ HS A I K K
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  295  KILGYAPKFSLQKGLEEAIKWYCEN  319
             +L+Y P F ++ GL +++KWY ++
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWYIDK  340

112) FP1297 in NC_009613


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  273 bits (1023),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 171/320 (54%), Positives = 238/320 (75%), Gaps = 8/320 (2%)

Query  9    LITGGAGFIGSNLSEYFLDKGHEVVCLDNFVTGHRYNIEHLLAN------KNYSLIEGDI  62
            LITG AGFIGS L E +L   + V+ LDNF TG + N++++ ++        + +I+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  63   RNLSDCQKALIGVDYVLHQAALGSVPRSISDPITTNEVNVSGFLNMLSAAKEAKVKRFIY  122
            R+++DCQKA   VDYVLHQAALGSVPRS+ DPI+TN  N+ GFLNML+AA++A V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  123  AASSSTYGDSESLPKVENVIGKPLSPYAITKYINELYADIFSKTYAIETIGLRYFNVFGR  182
            AASSSTYGD   LPK+E+ IG+PLSPYA+TKY+NELYAD+F+++Y +++IGLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  183  KQDPKGAYAAVIPKFVQQFINYENPV-INGDGNYSRDFTYIDNVIQMNELAMFTQNPEAV  241
            +Q+P+GAY+AVIP+ +  +++ ++P+ INGDG+ SRDF YI+NVIQ N L+  T++  + 
Sbjct  199  RQNPNGAYSAVIPRWILSLLK-DEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASK  257

Query  242  NTVYNTAFGDSTTLNDLVKKLQFELSQFDPKIANVNIIYGPNRAGDIPHSLASIDKAKKL  301
            N VYN A GD T+LN+L   ++  L+      +  + IY   R GD+ HS A I K K +
Sbjct  258  NKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTF  317

Query  302  LGYNPKFSMQEGLKQSVKWY  321
            L+Y+P F ++EGLKQ++KWY
Sbjct  318  LSYEPEFDIKEGLKQTLKWY  337

113) wbpP in NC_016620


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  271 bits (1015),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 167/307 (55%), Positives = 230/307 (75%), Gaps = 0/307 (0%)

Query  1    MIEFLLSSGQRVVGLDNFSTGRRENLSDVEKSVGSEAWSCFSFIEGDILDLETCKRAVAG  60
            ++E LL   Q V+GLDNFSTG ++NL DV  SV+ E WS F FI+GDI  +  C++A   
Sbjct  31   LLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN  90

Query  61   VDYVLHQAALGSVPRSIKDPLNSHNSNVNGQLNMLWASKLsgvksfvfassssvYGDHPA  120
            VDYVLHQAALGSVPRS+KDP+ ++++N++G LNML A++ + V SF +A+SSS YGDHP 
Sbjct  91   VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPD  150

Query  121  LPKVESEIGMQLSPYAVTKHVNELYANVFFKNYGLNTVGIRYFNVFGKRQDPNSVYAAVI  180
            LPK+E  IG  LSPYAVTK VNELYA+VF ++Y +N++G+RYFNVFG+RQ+PN+ Y+AVI
Sbjct  151  LPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVI  210

Query  181  PRWVKAMLSDEKVVIFGDGETSRDFCYIDNVVQMNILSALSQEKAVFGTVFNCACHDRTT  240
            PRW+ ++L DE + I GDG TSRDFCYI+NV+Q N+LSA +++ A    V+N A  DRT+
Sbjct  211  PRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTS  270

Query  241  LNKLFFLIKRELVKYDSSLADIDVGYGDFRDGDIRHSHADISKAADLLGYSPSHMVEEGL  300
            LN L++LI+  L    +  +  +  Y DFRDGD++HS+ADI+K   +L+Y P   + EGL
Sbjct  271  LNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGL  330

Query  301  IESIDWY  307
             +++ WY
Sbjct  331  KQTLKWY  337

114) RA0C_0995 in NC_017045


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  269 bits (1006),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 172/325 (53%), Positives = 231/325 (72%), Gaps = 6/325 (1%)

Query  1    MNNRKILITGGAGFIGSNLTEHFLSKNYQVRVLDNFSTGHKYNIEPFFKN------EKFE  54
            +  ++ LITG AGFIGS L E++L  N  V  LDNFSTG + N++    +       +F 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  55   LIEGDIRNLEICNEACEGVDYVLHQAALGSVPRSIENPITSNEVNVSGFLNMLVAARDAK  114
            +I+GDIR++  C+ AC  VDYVLHQAALGSVPRS+ +PI++N  N+ GFLNML AARDA 
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  115  VKRFVYAASSSTYGDSQSLPKVEEVIGKPLSPYAITKYVNELYADVFSRTYGMECIGLRY  174
            V  F YAASSSTYGD   LPK+EE IG+PLSPYA+TKYVNELYADVF+R+Y  + IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  175  FNVFGRRQDPKGAYAAVIPKFVIQLMNYQSPTINGDGSYSRDFTYIDNVIQMNELAMLTD  234
            FNVFGRRQ+P+GAY+AVIP+ ++ L++ ++  INGDGS SRDF YI+NVIQ N L+  T+
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  235  NPEAVNTVYNTAVGDRTTIKQMAELLKKYLSKYDEKIAAVEILHGPNRLGDIPHSLASID  294
            +  + N VYN AVGDRT+++++  L++  L+   +  +  E +    R GD+ HS A I 
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  295  KAKENLGYAPTHIFEQGLEEAVDWY  319
            K K  L+Y P   + +GL +++ WY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

115) Riean_0758 in NC_014738


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  269 bits (1006),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 172/325 (53%), Positives = 231/325 (72%), Gaps = 6/325 (1%)

Query  1    MNNRKILITGGAGFIGSNLTEHFLSKNYQVRVLDNFSTGHKYNIEPFFKN------EKFE  54
            +  ++ LITG AGFIGS L E++L  N  V  LDNFSTG + N++    +       +F 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  55   LIEGDIRNLEICNEACEGVDYVLHQAALGSVPRSIENPITSNEVNVSGFLNMLVAARDAK  114
            +I+GDIR++  C+ AC  VDYVLHQAALGSVPRS+ +PI++N  N+ GFLNML AARDA 
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  115  VKRFVYAASSSTYGDSQSLPKVEEVIGKPLSPYAITKYVNELYADVFSRTYGMECIGLRY  174
            V  F YAASSSTYGD   LPK+EE IG+PLSPYA+TKYVNELYADVF+R+Y  + IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  175  FNVFGRRQDPKGAYAAVIPKFVIQLMNYQSPTINGDGSYSRDFTYIDNVIQMNELAMLTD  234
            FNVFGRRQ+P+GAY+AVIP+ ++ L++ ++  INGDGS SRDF YI+NVIQ N L+  T+
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  235  NPEAVNTVYNTAVGDRTTIKQMAELLKKYLSKYDEKIAAVEILHGPNRLGDIPHSLASID  294
            +  + N VYN AVGDRT+++++  L++  L+   +  +  E +    R GD+ HS A I 
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  295  KAKENLGYAPTHIFEQGLEEAVDWY  319
            K K  L+Y P   + +GL +++ WY
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

116) Odosp_3554 in NC_015160


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  268 bits (1001),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 171/322 (54%), Positives = 233/322 (73%), Gaps = 4/322 (1%)

Query  2    RKFLVTGGAGFIGSNLCEYLLKAGEEVTCLDNFATG---KFENIEALLREYP-ERFKLQV  57
            ++ L+TG AGFIGS L E LL   + V  LDNF+TG   +++++ + + E    RF +  
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  58   GDIRKPEDCRKAVAEAEYVFHEAALGSVPRSINDPQTTNEVNISGFLNMLVAARDAGVRR  117
            GDIRK  DC+KA  + +YV+H+AALGSVPRS++DP +TN  NI GFLNML AARDA V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  118  FVYAASSSTYGDSQNLPKVEEVIGRPLSPYAITKYVNELYADVFGRVYGMECIGLRYFNV  177
            F YAASSSTYGD  +LPK+EE IGRPLSPYA+TKYVNELYADVF+R Y  + IGLRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  178  FGRRQSPDGAYAAVIPKFVEQLMRYESPVINGDGEYSRDFTYIDNVLQMNWLAMNTENPK  237
            FGRRQ+P+GAY+AVIP+ +  L++ E+  INGDG  SRDF YI+NV+Q N L+  T++  
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  238  AVNTVYNTAYGENTTLNQLVGYLKELLGFYDARIADVDIVYGPVRKGDIPHSLASIDKAR  297
            + N VYN A G+ T+LN+L   +++ L +     +  + +Y   R GD+ HS A I K +
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  298  QLLGYDPRFNMKQGLREAVKWY  319
             +L+Y+P F++K+GL++++KWY
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWY  337

117) Weevi_0963 in NC_015144


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 174/319 (55%), Positives = 228/319 (72%), Gaps = 6/319 (1%)

Query  5    LITGGAGFIGSNLTEYFLAKGYQVRCLDNFATGHRHNIEPFFAN------SNYQLIEGDI  58
            LITG AGFIGS L E +L     V  LDNF+TG +HN++   ++      S + +I+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  59   RDLETCKKAVEGVDYVLHQAALGSVPRSINDPITSNEVNVSGFLNMLVAARDARVKRFVY  118
            R +  C+KA   VDYVLHQAALGSVPRS++DPI++N  N+ GFLNML AARDA+V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  119  AASSSTYGDSESLPKIEDVIGKPLSPYAITKYVNELYADVFSKTYGLSCIGLRYFNVFGR  178
            AASSSTYGD   LPKIE+ IG+PLSPYA+TKYVNELYADVF+++Y ++ IGLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  179  RQDPNGAYAAVIPLFVKQFMNHKSPTINGTGDYSRDFTYIDNVIQMNELAMLTTNSEAIN  238
            RQ+PNGAY+AVIP  +  ++++ +  ING G  SRDF YI+NVIQ N L+  T +  + N
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  239  TVYNTAVGDRTTLNDLVAYLKEYLSEYDVEIANVDVIHGPNRVGDIPHSLASIEKAQRLL  298
             VYN AVGDRT+LN+L   +++ L+    E +  + I    R GD+ HS A I K + +L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  299  GYQPSHTIGKGLKEAVKWY  317
            +Y+P   I  GLK+++KWY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

118) wbpP in NC_020156


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  261 bits (977),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 173/324 (54%), Positives = 230/324 (71%), Gaps = 10/324 (3%)

Query  3    NNLLITGAAGFIGSNLSE--YFCKKGYDVLALDNLSTGHFKNIEHLAS------YPNFKF  54
            +  LITG AGFIGS L E   F ++   V++LDN+STG   N++++ +       + F F
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQT--VIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIF  73

Query  55   IEGDIRDVTTCDAAVKGRDFVMHQAALGSVPRSLKDPITSNEVNVGGFLNMLVASNNAGV  114
            I+GDIR  T C+ A K  D+V+HQAALGSVPRSLKDPI++N  N++GFLNML A+ +A V
Sbjct  74   IQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHV  133

Query  115  KKMIYAASSSTYGDSQELPKKEGIIGKPLSPYAVTKFVNELYAGVFYKSYGFNAIGLRYF  174
                YAASSSTYGD  +LPK E  IG+PLSPYAVTK+VNELYA+VF +SY FNAIGLRYF
Sbjct  134  SSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYF  193

Query  175  NVFGRKQSPEGAYAAVIPLFTKKLMNKESPIINGDGSFSRDFTYIDNVIQANERAMLSTN  234
            NVFGR+Q+P+GAY+AVIP     L++ E+  INGDGS SRDF YI+NVIQAN  +  + +
Sbjct  194  NVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTND  253

Query  235  PKSANNIFNVACGEQTDLNSLVDLLKEALSRYDESIKDVEVIYGPTRDGDIPHSLASIQK  294
              S N+++NVA G++T LN L  L++++L+   +     E IY   RDGD+ HS A I K
Sbjct  254  LASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITK  313

Query  295  AKEIIEYDPKYDIKKGLNLAVDWY  318
             K ++ Y+P +DIK GL+ ++ WY
Sbjct  314  IKTFLSYEPEFDIKEGLKQTLKWY  337

119) Lacal_1032 in NC_015638


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  261 bits (975),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 172/322 (54%), Positives = 234/322 (73%), Gaps = 8/322 (2%)

Query  14   FLVTGGAGFIGSNIVDYLLKNDAKRVVILDNFSTGHHKNINNLIKD------SRCELIEG  67
             L+TG AGFIGS +++ LL  +   V+ LDNFSTG + N++++         SR  +I+G
Sbjct  18   WLITGVAGFIGSGLLEELLFLNQT-VIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  68   DIRDLETCKKSTIDVDYVLHQAALGSVPRSINDPLTSNEVNVSGFLNMLIAAKESKSVKR  127
            DIR +  C+K+  +VDYVLHQAALGSVPRS++DP+++N  N+ GFLNML AA+++  V  
Sbjct  77   DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSS  135

Query  128  MVYAASSSTYGDSEGLPKVEDVIGKPLSPYAVTKYVNELYADVFYKTYGLETIGLRYFNV  187
              YAASSSTYGD  +LPK+E+ IG+PLSPYAVTKYVNELYADVF ++Y +++IGLRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  188  FGPKQDPEGAYAAVIPKFVGQFLNKENIVINGDGEHSRDFTFIENVIQANIKAALAEKPE  247
            FG +Q+P+GAY+AVIP+ +  +L+ E I INGDG  SRDF +IENVIQAN+ +A ++   
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  248  AVNQVYNVAFGENTNLNELVDDIKSGLKNLNVDYSATIVKHGPDRVGDVKHSLADITKAK  307
            + N+VYNVA G+ T+LNEL   I+ GL+    + S +       R GDVKHS ADITK K
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  308  KLIDYNPLYSFKEGIKITTEWY  329
             ++ Y+P + +KEG+K T  WY
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWY  337

120) Cycma_3084 in NC_015914


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 170/350 (49%), Positives = 240/350 (69%), Gaps = 28/350 (8%)

Query  2    KFEVKNNKVLVTGGAGFIGSNLIDILLENGNSVVCLDNFSTGNIQNLELAQSN------A  55
            K+ +  ++ L+TG AGFIGS L++ LL   ++V+ LDNFSTG  +NL+  +++      +
Sbjct  10   KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWS  69

Query  56   NFTLIEGDIRDKDTCIQAVEGCDYVFHQAALGSVPRSIADPITSTAVNIMGFVNLLFAAK  115
             F +I+GDIR    C +A    DYV+HQAALGSVPRS+ DPI++ + NI GF+N+L AA+
Sbjct  70   RFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAAR  129

Query  116  EAGVKRFIYAASSSTYGDHKALPKVEHVIGNALSPYAITKYVDELFAKNFSDIYGIETVG  175
            +A V  F YAASSSTYGDH  LPK+E+ IG +LSPYA+TKYV+EL+A  F+  Y ++++G
Sbjct  130  DAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIG  189

Query  176  LRYFNVFGKRQDPNGGYAAVIPKFVSSLIKHQSPYINGDGTNSRDFTYIDNVIQANLLAA  235
            LRYFNVFG+RQ+PNG+Y+AVIP+ + SL+K+++ YINGDG+ SRDF YI+NVIQANLL+A
Sbjct  190  LRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSA  249

Query  236  AVPSAIFKERMKEYQANTAGVPGINEGATISEVFNVAYGERTSLNELAAAIKEGLSNYDP  295
            +                       N+ A+ + V+NVA G+RTSLNEL   I++GL+    
Sbjct  250  TT----------------------NDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRN  287

Query  296  AIAAISFQYGPNRPGDVAHSMASIDKGKTILGYVPQYSFQTGLKEACAWY  345
              +     Y   R GDV HS A I K KT+L+Y P++ ++ GLK++  WY
Sbjct  288  EQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

121) BSn5_04350 in NC_014976


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  256 bits (955),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 159/324 (50%), Positives = 226/324 (70%), Gaps = 13/324 (4%)

Query  15   KFLVTGGAGFIGSNLVEKILEMGFYVRVLDNFSTGNKENIEVFYSN------SNFDLQKG  68
            + L+TG AGFIGS L+E +L +   V  LDNFSTG ++N++   ++      S F + +G
Sbjct  17   RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  69   DIRNLEECQKACEGIDYVLHQAALGSVPRSIDKPIETNDVNVNGTLNMLVASKKAKVKRF  128
            DIR++ +CQKAC  +DYVLHQAALGSVPRS+  PI TN  N++G LNML A++ A V  F
Sbjct  77   DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF  136

Query  129  VYASSSSVYGDDLNLPKIEDRIGNPLSPYAITKLTKELYSKNFNEIYDFPTIGLRYFNVF  188
             YA+SSS YGD+ +LPKIE+RIG PLSPYA+TK  +ELY+  F   Y+F +IGLRYFNVF
Sbjct  137  TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVF  196

Query  189  GKRQNPNSIYAAVIPKFIKTLLYNKPPIINGDGLQTRDFTFIDNVVQANLKACLAKE-ES  247
            G+RQNPN+ Y+AVIP+ I +LL + P  INGDG  +RDF +I+NV+QANL +  +++  S
Sbjct  197  GRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLAS  256

Query  248  FGKVFNIAFGQQKTIIQLY------SDISRILRKEIVPKFGPDRVGDVRHSNADINKAMN  301
              KV+N+A G++ ++ +LY       ++ R  +    P +   R GDV+HS+ADI K   
Sbjct  257  KNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKT  316

Query  302  LLNYKPDYDVATGLRLTIDWYKNN  325
            +L+Y P++D+  GL+ T+ WY ++
Sbjct  317  FLSYEPEFDIKEGLKQTLKWYIDK  340

122) FBFL15_2484 in NC_016001


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  251 bits (938),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 161/319 (51%), Positives = 226/319 (71%), Gaps = 6/319 (1%)

Query  9    LVTGGAGFIGSNLVADFLNHQNKVWCLDNLSTG---KFQNIEPYLNH---PNFTFIEGDI  62
            L+TG AGFIGS L+ ++L  ++ V  LDN+STG   +++++   +++   + F FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  63   RSFETCQEAVQNIDYVFHQAALGSIPRSLDNPRLTNEVNVSGFLNMILAAKDAQVKRFIY  122
            R F  CQ A +N+DYV+HQAALGS+PRSL +P  TN  N+ GFLNM+ AA+DA+V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  123  AASSSTYGDSEHLPKTEAIIGNPLSPYAVSKYVNELYAHVFGLNYGLETIGLRYFNVFGP  182
            AASSSTYGD  +LPK E  IG PLSPYAV+KYVNELYA+VF+ +Y +++IGLRYFNVFG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  183  KQSPDGVYAAVIPTFTKLLMDHQSPKINGDGLNSRDFTYIANVIQMNHLAALTQNPNAIG  242
            +Q+P+G Y+AVIP     L+ +++  INGDG  SRDF YI NVIQ N L+A T++  +  
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  243  QVFNTAVGERSNLLELIAHLKICLSKYDPEINQIPIIHGPNRQGDIPHSLASIDKAKTLL  302
            +V+N AVG+R++L EL   ++  L+    E ++   I    R+GD+ HS A I K KT+L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  303  GYEPTHNLEKGLTEAVDWY  321
            +YEP  ++  GL +++ WY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

123) TREPR_0344 in NC_015578


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  249 bits (928),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 164/322 (51%), Positives = 231/322 (72%), Gaps = 4/322 (1%)

Query  1    MKILITGGAGFIGSNLCEYFLKNAHNIVCFDNFSTG---KVENITNFLLQYP-NTFELQV  56
             + LITG AGFIGS L E +L   + ++ +DNFSTG   +++++   + +   + F +  
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  57   GDIRNISDCRKAVEGVDVVLHEAALGSVPRSIKDPITTNEVNISGFLNMLVSSCDAKIKR  116
            GDIR+++DC+KA   VD VLH+AALGSVPRS+KDPI+TN  NI GFLNML ++ DA +  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  117  FIYAASSSTYGNSEILPKEEDVIGKPLSPYAVTKYVNELYADVFSKTYGVECIGLRYFNV  176
            F YAASSSTYG+   LPK E+ IG+PLSPYAVTKYVNELYADVF+++Y  + IGLRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  177  FGRRQDPFGAYAAVIPLFIKNFINHESPVINGDGQYSRDFTFIDNVIQMNMLAINTDNQK  236
            FGRRQ+P GAY+AVIP  I +++++E+  INGDG  SRDF +I+NVIQ N+L+  T++  
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  237  ALNQIYNTACGEKTTLNQLVVYLKELLCQYDSEIEKIEILHGKERAGDIPHSLASIEKAK  296
            + N++YN A G++T+LN+L   +++ L    +E  + E +    R GD+ HS A I K K
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  297  KLLGYIPKQNIYDGLKESIDWY  318
             +L+Y P  +I +GLK+++ WY
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWY  337

124) Tlie_1573 in NC_016148


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  247 bits (922),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 143/324 (45%), Positives = 221/324 (69%), Gaps = 5/324 (1%)

Query  14   RWAVTGAAGFVGSHLVESLLMMDQEVVAMDNFLSGRVKNLEEATSKLTDAQRQRFKFMEG  73
            RW +TG AGF+GS L+E LL ++Q V+++DNF +G   NL++  + +++ Q+ RF F++G
Sbjct  17   RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  74   DIRNYDDCLALCKGVDMVLHQAALVSVPRSFDDPLLNNQCNVDGFLNVLLAAKASGVKSL  133
            DIR++ DC   CK VD VLHQAAL SVPRS+ DP+  N  N+DGFLN+L AA+ + V S+
Sbjct  77   DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF  136

Query  134  VYASSAAVYGDGGENALKESSLLNPKSPYAVSKMTDELYAQVLSE--DLNVVGLRYMNVY  191
             YA+S++ YGD  + +  E  +  P SPYAV+K  +ELYA+V++   ++N +GLRY NV+
Sbjct  137  TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVF  196

Query  192  GPRQDPGSPYSGVITIWLSRIASGNEPIIYGDGKNTRDFVYVKDVVQANIRAALLG--AQ  249
            G RQ+P ++YS+VI  W+  +  ++   I GDG  +RDF Y+ +V+QAN+ +A     A 
Sbjct  197  GRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLAS  256

Query  250  GHEVFNIGTGRSVTLLELLDTIRD-LYQRKTGTNPPEGDFAPFRKGDVRFSKADISKAKE  308
             + V+N++ G   +L EL   IRD L  ++   + +E  +  FR GDV+ S+ADI+K K 
Sbjct  257  KNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKT  316

Query  309  LLGYDPEYSLREGLEKTIEWFISK  332
            +L+Y+PE+ ++EGL +T+ W+I K
Sbjct  317  FLSYEPEFDIKEGLKQTLKWYIDK  340

125) Oweho_3304 in NC_016599


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 166/327 (51%), Positives = 228/327 (70%), Gaps = 14/327 (4%)

Query  11   LADKSFLITGGAGFIGSNIVEYLLKYGASKVRVLDNLSNGYYTNIEEFETNPA------F  64
            LA K  LITG AGFIGS ++E LL +    V  LDN+S GY  N+++  T+ +      F
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELL-FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRF  71

Query  65   EFVEGDIRDLETCKKALVGIDYVSHQAALGSVPRSIEDPINTNSVNIDGFLNMLTAVKDS  124
             F++GDIR +  C+KA   +DYV HQAALGSVPRS+ DPI TNS NIDGFLNMLTA +D+
Sbjct  72   IFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA  131

Query  125  DGIKRMVYAASSSSYGDSPALPKVEGNEGNPLSPYAVTKWVNELYADVYSKVYGLHTVGL  184
            + +    YAASSS+YGD P LPK+E   G PLSPYAVTK VNELYADV+++ Y ++++GL
Sbjct  132  H-VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGL  190

Query  185  RYFNIFGPRQNPDNPYAAVIPLFMKAAIDGVAPKMNGDGETSRDFTFVENAVQANVKAML  244
            RYFN+FG RQNP+ +Y+AVIP  + + + + +  +NGDG TSRDF ++EN +QAN+ +  
Sbjct  191  RYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSAT  250

Query  245  NTENLDQHEACNIAVGDRTTLNQL----WDGIA--KAADTDLSPVYGPERPGDVKHSLAD  298
              +   ++   N+AVGDRT+LN+L    +DG+   +  ++   P+Y   R GDVKHS AD
Sbjct  251  TNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQAD  310

Query  299  ISKAKTILGYNPKFRIDDGLKIAFDYY  325
            I+K KT+L+Y+P F I +GLK ++  Y
Sbjct  311  ITKIKTFLSYEPEFDIKEGLKQTLKWY  337

126) P700755_003406 in NC_018721


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  245 bits (916),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 170/322 (53%), Positives = 230/322 (72%), Gaps = 17/322 (5%)

Query  16   RFLVTGGAGFIGSNIVEYLLKFGAKHVRVLDNLSNGYRTNIKefesesnfef------le  69
            R L+TG AGFIGS ++E LL F  + V  LDN+S GY+ N+ +  +  + E       ++
Sbjct  17   RWLITGVAGFIGSGLLEELL-FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  70   GDIRKIEDCEQAVEDIDIVLHQAALGSVPRSIDDPILSNSVNVSGFLNMLVACKNSKTVK  129
            GDIRK+ DC++A  ++D VLHQAALGSVPRS+ DPI +NS N+ GFLNML A +++  V 
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VS  134

Query  130  RFVYAASSSTYGDSPTLPKVENTIGKPLSPYAVTKYVNELYADVFAKTYGLEVIGLRYFN  189
             F YAASSSTYGD P LPK+E+ IG+PLSPYAVTKYVNELYADVFA++Y ++ IGLRYFN
Sbjct  135  SFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFN  194

Query  190  VFGPKQSPEGAYAAVIPLFMQSLKDQNSPTMNGDGEQTRDFTFVENAVQAN-IKASFADK  248
            VFG +Q+P+GAY+AVIP  + SL  +++  +NGDG  +RDF ++EN +QAN + A+  D 
Sbjct  195  VFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL  254

Query  249  KATNEVYNVACGDRISLN----LLWSALE--KASGSSLKAIYGPPRQGDVKDSLADINKA  302
             + N VYNVA GDR SLN    L++ +L+  +   S   +IY   R+GDVK+S ADI K 
Sbjct  255  ASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKI  314

Query  303  KELIGYEPKFNVEEGLK--ITW  322
            K +++YEP F++ EGLK  + W
Sbjct  315  KTFLSYEPEFDIKEGLKQTLKW  336

127) Echvi_4409 in NC_019904


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  243 bits (908),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 168/345 (49%), Positives = 228/345 (67%), Gaps = 26/345 (7%)

Query  10   LSGAKVLVTGGAGFIGSNLIDALLEAGSRVVCLDNFSTGKRTNLEKALTS------SRFS  63
            L+  + L+TG AGFIGS L++ LL     V+ LDNFSTG + NL+   TS      SRF 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  64   LIEGDIRDYTTCAEAVEGCKWVFHQAALGSVPRSIADPMTSTDVNIGGFVKVLFAAKEAG  123
            +I+GDIR +T C  A      V+HQAALGSVPRS+ DP+++   NI+GF+++L AA++A 
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  124  VQRVVYAASSSTYGDHPDLPKVEHVIGNALSPYAITKYVDELFAKNFADTYGLETIGLRY  183
            V    YAASSSTYGDHPDLPK+E+ IG +LSPYA+TKYV+EL+A  FA +Y +++IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  184  FNVFGRRQDPDGAYAAVIPKFVRCLVEGESPRINGDGSFSRDFTYIDNVIQANVKAAVTG  243
            FNVFGRRQ+P+GAY+AVIP+ +  L+ +E+  INGDGS SRDF YI+NVIQAN+ +A T 
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  244  TALMKANLAEYHAHIGRPFNTDAVISEVFNVAFGERVNLNELGSYLKEELSKFDKEISGI  303
                K +                    V+NVA G+R +LNEL   +++ L+   +E S  
Sbjct  253  DLASKNK--------------------VYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRA  292

Query  304  PMEYGPQRAGDVPHSLASIEKGRKVIGYEPEYSVRQGLGLACEWY  348
               Y   R GDV HS A I K +  ++YEPE+ +++GL  +  WY
Sbjct  293  EPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

128) Aeqsu_2223 in NC_018013


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  239 bits (890),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 161/330 (49%), Positives = 225/330 (69%), Gaps = 25/330 (7%)

Query  11   LSNHTFLVTGGAGFIGSNLVAYLLNNNAKKVRVLDNLATGFMKNLEPFQNN------PSF  64
            L+    L+TG AGFIGS L+  LL  N + V  LDN++TG+  NL+  + +      + F
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLN-QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRF  71

Query  65   EFLEGDIRDVEICKKAMDGIDYVSHQAALGSVPRSINDPITSNDVNVGGFLNMLVAQKES  124
             F++GDIR    C+KA   +DYV HQAALGSVPRS++DPI++N  N++GFLNML A +++
Sbjct  72   IFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA  131

Query  125  KTVKRLVYAASSSTYGDSPSLPKVEDTIGKPLSPYAVTKLVNELYADVFYKTYGTQTIGL  184
              V  + YAASSSTYGD P LPK+E+ IG+PLSPYAVTK VNELYADVF ++Y  ++IGL
Sbjct  132  H-VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGL  190

Query  185  RYFNVFGPNQSPTGAYAAVIPLFMQALKDEKAPTINGDGEQTRDFTFVQNAVQANVRALF  244
            RYFNVFG  Q+P GAY+AVIP  + +L  + +  INGDG  +RDF +++N +QAN+ +  
Sbjct  191  RYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSAT  250

Query  245  AKE-EAVNQVFNVAFGERISLN----------TLWSDLQSISEKELKAINGPERKGDVRD  293
            +++  + N+V+NVA G+R SLN           LW + QS +E   K +    R GDV++
Sbjct  251  TNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDF----RDGDVKH  306

Query  294  SLANINKARTLMGYDPLFSVKEGLK--LTW  321
            S A+I K +T+++Y+P F +KEGLK  L W
Sbjct  307  SQADITKIKTFLSYEPEFDIKEGLKQTLKW  336

129) CHY_1057 in NC_007503


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  234 bits (874),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 140/320 (44%), Positives = 219/320 (69%), Gaps = 16/320 (5%)

Query  3    KFLVTGGAGFIGSHIVERLVRDGAEVVVLDDLSSGKEENLSEV--------LDKITFIKG  54
            + L+TG AGFIGS ++E L+     V+ LD++S+G ++NL +V          ++ FI+G
Sbjct  17   RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  55   DVRDLDLIKGITKDVDYILHEAAMASVPASIDDPLKCHEVNVTGTINVLLSAKENGVKRV  114
            D+R +   +   K+VDY+LH+AA++SVP S+ DP+  +  N+ G +N+L +A++  V   
Sbjct  77   DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF  136

Query  115  VYAASSAVYGNNETLPKKEDMYPEPLSPYAVSKYAGELYLQVFARIYGIEAVGLRYFNVF  174
             YAASS+ YG++  LPK E+    PLSPYAV+KY  ELY +VFAR Y ++A+GLRYFNVF
Sbjct  137  TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVF  196

Query  175  GPKQDPNSQYAAVIPKFIDALLKGMPPTIYGDGMQTRDFIFIDDVVEANMLALTAR--GA  232
            G +Q+PN+ Y+AVIP+ I +LLK+ P  I GDG  +RDF +I++V++AN+L+ T+   ++
Sbjct  197  GRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLAS  256

Query  233  SGKVFNIACGERISLNRLYKVIKEIIGV------DIEPVYAEARVGDVRDSLADISLARN  286
              KV+N+A G+R SLN LY +I++ + +        EP+Y + R GDV++S ADI+  + 
Sbjct  257  KNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKT  316

Query  287  ILGFEPKVSLEEGLKKTVEW  306
            +L++EP   + EGLK+T+ W
Sbjct  317  FLSYEPEFDIKEGLKQTLKW  336

130) SpiBuddy_0264 in NC_015152


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  233 bits (870),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 148/319 (47%), Positives = 216/319 (68%), Gaps = 13/319 (4%)

Query  15   LVTGGAGFIGSNLCEAILRMGYIVRCLDDLSTGFLKNIEDFKDN------PKFTFIKNDI  68
            L+TG AGFIGS L E +L +   V  LD++STG+  N++D + +      ++F FI+ DI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   KDFDNCLNATKDVNYVLHQAAWGSVPRSIEMPLFYEQNNVMGTLNMMEAARQNKVKKFIY  128
            + F +C +A K+V+YVLHQAA GSVPRS+  P+  +  N+ G LNM+ AAR+  V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGSEGNLLSPYALTKRTNEEYGKLYHKLYGLDTYGLRYFNVFGK  188
            A+SSS YGD+P+LPK E   G  LSPYA+TK  NE Y+ ++ + Y +++ GLRYFNVFG+
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQNPDGDYAAVIPKWIKQLMNNEAPVIHGDGKQSRDFTYIENVIEAN-LKTCMGSYDAAG  247
            RQNP+G Y+AVIP+WI  L+++E+  I+GDG  SRDF YIENVI+AN L +      +  
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  EAYNIAFGGREYLIDIFNELTGALGI------KTEPKYGPDRAGDIKHSNADISKAKTLL  301
              YN+A G+R  L +++  + ++L +      ++EP Y   R GD+KHS+ADI+K KT+L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYDPDWSFERGIKAVIEWY  320
            +Y+P+  +  G+K  + WY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

131) galE in NC_016940


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  231 bits (863),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 152/320 (48%), Positives = 225/320 (71%), Gaps = 13/320 (4%)

Query  17   LITGGAGFIGSNLVEYFLKYGAKKVRVIDNFLTGFRENLAPYM------DHPNFELIEGD  70
            LITG AGFIGS L+E +L +  + V  +DNF TG+++NL          + + F +I+GD
Sbjct  19   LITGVAGFIGSGLLEELL-FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGD  77

Query  71   ISVLADCEKACEGMDAVCHQAALGSVPRSVAQPHLTTLHNVNGFVNMVHAAHQAGIKRFV  130
            I  ++DC+KAC  +D V HQAALGSVPRS+ +P  T   N++GF+NM+ AA++A +  F 
Sbjct  78   IRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFT  137

Query  131  YASSSSVYGDEPNLPKVEDRIGQQLSPYAITKYSNELFAKNFGDLYGMEFMGFRYFNVFG  190
            YA+SSS YGD+P+LPK+E+RIG+ LSPYA+TKY NEL+A  F+  Y  + +G+RYFNVFG
Sbjct  138  YAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFG  197

Query  191  PKQSPKGAYAAVIPLFAEACLLGKTAYINGDGLQTRDFTFIENVVQMNVKALLTENPAAY  250
             +Q+P+GAY+AVIP    + L +   YINGDG  +RDF +IENV+Q N+ +  T++ A+ 
Sbjct  198  RRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASK  257

Query  251  NQVYNVGVGGRYSVLDLY----EG--IRKAAGSEQAPVHRESRAGDIRDSQANIEKAKTL  304
            N+VYNV+VG+R S+ +LY    +G  +++   S   P+ ++ R GD+++SQA+I K KT+
Sbjct  258  NKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTF  317

Query  305  LEYNPLFSFEEGLAITVQHF  324
            L Y+P F + EGL  T++ +
Sbjct  318  LSYEPEFDIKEGLKQTLKWY  337

132) F92_03255 in NC_019537


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  231 bits (860),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWYL  321
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

133) wbtF in NC_019551


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  231 bits (860),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWYL  321
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

134) FTL_0597 in NC_007880


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  231 bits (860),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWYL  321
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

135) wbtF in NC_010677


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  231 bits (860),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWYL  321
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

136) wbtF in NC_009257


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  231 bits (860),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWYL  321
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

137) wbtF in NC_009749


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  231 bits (860),  Expect = 6e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  19   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  72
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  73   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAARQNNVKKFVY  132
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  133  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  192
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  193  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  251
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  252  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  305
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  306  GYNPEYDFELGIKHAVEWYL  325
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

138) FTH_0597 in NC_008369


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  231 bits (860),  Expect = 6e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  19   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  72
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  73   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAARQNNVKKFVY  132
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  133  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  192
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  193  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  251
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  252  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  305
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  306  GYNPEYDFELGIKHAVEWYL  325
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

139) ELI_2406 in NC_014624


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 158/324 (49%), Positives = 216/324 (67%), Gaps = 13/324 (4%)

Query  13   KFLITGGAGFIGSNLCEALLKRGHFVRCLDDLSTG---KAENIQPFLEN---SNFEFIKG  66
            + LITG AGFIGS L E LL   + V  LD++STG   + ++++  + +   S F FI+G
Sbjct  17   RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  67   DIRDLDTCMNACKNIDYVSHQAAWGSVPRSIEMPLVYEEINIKGTLNMLEAARQNNVKKF  126
            DIR +  C +ACKN+DYV HQAA GSVPRS+  P+  +  NI G LNML AAR+ +V  F
Sbjct  77   DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF  136

Query  127  VYASSSSVYGDEPTLPKKEGREGNLLSPYALTKRTNEEYARLYTELYGLETIGFRYFNVF  186
             YA+SSS YGD+P LPK E R G  LSPYA+TK  NE YA +++  Y +++IG+RYFNVF
Sbjct  137  TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVF  196

Query  187  GRRQDPDGAYAAVIPKFVSSLLYNIAPKINGDGTQSRDFTYIENVIEAN-LKGMQAPREA  245
            GRRQ+P+GAY+AVIP+ + SLL + +  INGDG+ SRDF YIENVI+AN L +      +
Sbjct  197  GRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLAS  256

Query  246  AGEAFNIAYGGQVNLNELYQKLSELLG------KKIEPVYGPERAGDIKHSNADIDKARK  299
                +N+A G++ +LNELY  + + L        + EP+Y   R GD+KHS+ADI K + 
Sbjct  257  KNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKT  316

Query  300  FLKYAPEYSFERGIELTIAWYREM  323
            FL Y PE+ +  G+  T+ WY + 
Sbjct  317  FLSYEPEFDIKEGLKQTLKWYIDK  340

140) ELI_2698 in NC_014624


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 158/324 (49%), Positives = 216/324 (67%), Gaps = 13/324 (4%)

Query  13   KFLITGGAGFIGSNLCEALLKRGHFVRCLDDLSTG---KAENIQPFLEN---SNFEFIKG  66
            + LITG AGFIGS L E LL   + V  LD++STG   + ++++  + +   S F FI+G
Sbjct  17   RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  67   DIRDLDTCMNACKNIDYVSHQAAWGSVPRSIEMPLVYEEINIKGTLNMLEAARQNNVKKF  126
            DIR +  C +ACKN+DYV HQAA GSVPRS+  P+  +  NI G LNML AAR+ +V  F
Sbjct  77   DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF  136

Query  127  VYASSSSVYGDEPTLPKKEGREGNLLSPYALTKRTNEEYARLYTELYGLETIGFRYFNVF  186
             YA+SSS YGD+P LPK E R G  LSPYA+TK  NE YA +++  Y +++IG+RYFNVF
Sbjct  137  TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVF  196

Query  187  GRRQDPDGAYAAVIPKFVSSLLYNIAPKINGDGTQSRDFTYIENVIEAN-LKGMQAPREA  245
            GRRQ+P+GAY+AVIP+ + SLL + +  INGDG+ SRDF YIENVI+AN L +      +
Sbjct  197  GRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLAS  256

Query  246  AGEAFNIAYGGQVNLNELYQKLSELLG------KKIEPVYGPERAGDIKHSNADIDKARK  299
                +N+A G++ +LNELY  + + L        + EP+Y   R GD+KHS+ADI K + 
Sbjct  257  KNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKT  316

Query  300  FLKYAPEYSFERGIELTIAWYREM  323
            FL Y PE+ +  G+  T+ WY + 
Sbjct  317  FLSYEPEFDIKEGLKQTLKWYIDK  340

141) wbtF in NC_008245


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  230 bits (859),  Expect = 6e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGALNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWYL  321
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

142) NE061598_08150 in NC_017453


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  230 bits (859),  Expect = 6e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGALNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWYL  321
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

143) wbtF in NC_006570


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  230 bits (859),  Expect = 6e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGALNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWYL  321
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

144) wbtF in NC_016937


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  230 bits (859),  Expect = 6e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGALNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWYL  321
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

145) wbtF in NC_016933


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  230 bits (859),  Expect = 6e-62, Method: Compositional matrix adjust.
 Identities = 161/320 (51%), Positives = 214/320 (67%), Gaps = 13/320 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGALNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  ESFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWYL  321
            +Y+PE+D+  G+K+++ WY+
Sbjct  319  SYEPEFDIKEGLKQTLKWYI  338

146) wbtF in NC_008601


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  230 bits (858),  Expect = 9e-62, Method: Compositional matrix adjust.
 Identities = 161/319 (51%), Positives = 213/319 (67%), Gaps = 13/319 (4%)

Query  15   LVTGGAGFIGSNLCEVLLSKGYRVRCLDDLSNGHYHNVEPFLTN------SNYEFIKGDI  68
            L+TG AGFIGS L E LL     V  LD++S G  HN++   T+      S + FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   RDLDTCMKACEGIDYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAARQNNVKKFVY  128
            R +  C KAC  +DYVLHQAA GSVPRS+  P+  +  N+ G LNML AAR+ +V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPNLPKKEGREGNILSPYAFTKKANEEWARLYTKLYGLDTYGLRYFNVFGR  188
            A+SSS YGD+P+LPK E R G  LSPYA TK  NE  A ++++ Y +++ GLRYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEAN-LKACLADSKYAG  247
            RQ+PNGAY+AVIP+ I  LL+DE+  INGDG  SRDF YIENVI+AN L A   D     
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  EAFNIAYGGREYLIDLYYNLCDALG------KKIEPNFGPDRAGDIKHSNADISKARNML  301
              +N+A G+R  L +LYY + D+L        + EP +   R GD+KHS+ADI+K +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYNPEYDFELGIKHAVEWY  320
            +Y+PE+D+  G+K+++ WY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

147) galE in NC_008255


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  224 bits (835),  Expect = 5e-60, Method: Compositional matrix adjust.
 Identities = 152/329 (47%), Positives = 226/329 (69%), Gaps = 14/329 (4%)

Query  2    KRILITGGAGFIGSNLTEALLNRSDVELVRVLDNFSTGYQHNIHEFLT------HPKYEF  55
            KR LITG AGFIGS L E LL  ++   V  LDNFSTGYQHN+++  T       +++ F
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQT--VIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIF  73

Query  56   VEGDIRNYEDVVKAVEGIEVISHQAALGSVPRSLKDPMTSNNANVLGSMNVFHAAKESGA  115
            ++GDIR++ D  KA   ++ + HQAALGSVPRSLKDP+++N+AN+ G +N++ AA+++  
Sbjct  74   IQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHV  133

Query  116  DRVVYASSSSVYGDDPGSPKEEDRLGNVLSPYAASKRSIELYAKAFSNVYPFRFIAMRYF  175
                YA+SSS YGD+P+ PK E+R+G  LSPYA +K   ELYA  F+  Y F  I++RYF
Sbjct  134  SSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYF  193

Query  176  NVFGPRQNAQGAYAAVIPQFITALLNGQQATIFGDGSQTRDFTFIDNVLQMNIKALSTDN  235
            NVFG RQN++GAY+AVIP+ I +LL+++   I GDGS +RDF +I+NV+Q N+ + +T++
Sbjct  194  NVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTND  253

Query  236  ADAFNRYYNVACGSTTSLNRVYAILAG------CAGSDIKPHYTDPRQGDIKDSLANISL  289
              + N+ YNVA G  TSLN +Y ++ +         S   P Y D R+GD+K+S A+I+ 
Sbjct  254  LASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITK  313

Query  290  AQKHIGYKPEIQIEEGLIKTFDWFKKNQG  318
             +  ++Y PE++I EGL +T+ W+  +++
Sbjct  314  IKTFLSYEPEFDIKEGLKQTLKWYIDKHS  342

148) Lacal_0128 in NC_015638


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  224 bits (833),  Expect = 8e-60, Method: Compositional matrix adjust.
 Identities = 156/322 (49%), Positives = 219/322 (69%), Gaps = 17/322 (5%)

Query  14   QFLVTGGAGFIGSHIVSYLLAHQAKKVRVLDNLATGFKTNLEPFFNQ------ANFEFIE  67
            + L+TG AGFIGS ++  LL    + V  LDN++TG++ NL+           + F FI+
Sbjct  17   RWLITGVAGFIGSGLLEELL-FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  68   GDIRDLDTCKAAMQDMDYVSHQAALGSVPRSIDDPVTSNAVNVSGFLNMLIALKDNTTVK  127
            GDIR +  C+ A +++DYV HQAALGSVPRS+ DP+++N+ N+ GFLNML A +D + V 
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARD-AHVS  134

Query  128  RMVYAASSSTYGDSTILPKVESSIGSPLSPYAVTKYVNELYADVFGKTYNTDTIGLRYFN  187
               YAASSSTYGD   LPK+E  IG PLSPYAVTKYVNELYADVF+++Y+ ++IGLRYFN
Sbjct  135  SFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFN  194

Query  188  VFGPKQNPNGAYAAVVPLFMKALVDNVPATINGDGSQTRDFTYVSNAVQGNIKSFFASG-  246
            VFG +QNPNGAY+AV+P  + +L+ + P  INGDGS +RDF Y+ N +Q+N+ S  +++ 
Sbjct  195  VFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL  254

Query  247  EAKNEVFNIACNDRISIIKL----WETLGVLANKSTKVK--FGPKRLGDVKDSLADISKA  300
             +KN V+N+A  DR S+  L    ++ L +  N  ++    +   R GDVK+S ADI+K 
Sbjct  255  ASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKI  314

Query  301  ERLIGYKPKYSTVEGLKAT--W  320
              +++Y P +   EGLK T  W
Sbjct  315  KTFLSYEPEFDIKEGLKQTLKW  336

149) AL1_18440 in NC_021030


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  221 bits (822),  Expect = 6e-59, Method: Compositional matrix adjust.
 Identities = 156/322 (49%), Positives = 211/322 (66%), Gaps = 13/322 (4%)

Query  15   LVTGGAGFIGSNLCEAILNLGYRIRCLDDLSTGKQANIDLFLGH------PNYEFIQGDI  68
            L+TG AGFIGS L E +L L   +  LD++STG Q N+D           + + FIQGDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  69   KDLQTCIDACKNVDYVLHQAAWGSVPRSLEMPLFYSLNNIQGTLNMLEAARQNGVKKFVY  128
            + +  C  ACKNVDYVLHQAA GSVPRSL  P+  +  NI+G LNML AAR+  V  F Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  129  ASSSSVYGDEPVLPKEEGHEGNLLSPYAVTKRCDEEWAKQYTRHYGLDTYGMRYFNVFGR  188
            A+SSS YGD+P LPK E + G  LSPYAVTK  +E  A  ++R Y +++ G+RYFNVFGR
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  189  RQDPDGAYAAVLPKFIKMLLNNEQPTINGDGRQSRDFTYIENVIEAN-LKACLASTEAAG  247
            RQ+P+GAY+AV+P+ I  LL++E   INGDG  SRDF YIENVI+AN L A      +  
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  248  KAFNIAYGGREYLIDIYHTLTRVLG------KNIEPHFGPDRKGDIKHSNADISQARKLL  301
            K +N+A G+R  L ++Y  +   L          EP +   R GD+KHS+ADI++ + +L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  302  GYDPEYDFARGLAESIEWYKNN  323
            +Y+PE+D+  GL +++ WY ++
Sbjct  319  SYEPEFDIKEGLKQTLKWYIDK  340

150) ELI_4554 in NC_014624


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  220 bits (819),  Expect = 9e-59, Method: Compositional matrix adjust.
 Identities = 149/325 (46%), Positives = 218/325 (68%), Gaps = 13/325 (4%)

Query  12   SRFLVTGGAGFIGSAVCEALLSMGYFVRCLDDLSTG---SKENIRPFFNN---PGFEFIK  65
             R L+TG AGFIGS++ E LL +   V  LD++STG   + +++R   ++   + F FI+
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  66   GDIQDYDICLEACGGIDYVSHQAAWGSVPRSIKLPLLYEGINVKGTLNMLEAARQKGVRR  125
            GDI+ +  C  AC  +DYV HQAA GSVPRS+K P+  ++ N+ G LNML AAR+  V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  126  FVYASSSSVYGDEERLPKTESQMGNCLSPYALTKKTAEEYAGLYTRLYGLETIGFRYFNV  185
            F YA+SSS YGD+  LPK E ++G  LSPYA+TK   E YA++++R Y +++IG+RYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  186  FGKRQNPEGVYAAVIPKFVKSLMAGEAPRINGDGSQSRDFTYIENAVEANLKGMLAPK-E  244
            FG+RQNP+G Y+AVIP+ + SL+ +E+  INGDGS SRDF YIEN ++ANL +  +    
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  245  AAGAAYNIACGGQISLNRLYYTLCGLLN------RELPPVYGPERPGDIRHSCADITAAR  298
            +    YN+A G++ SLN LYY + + LN          P+Y   R GD++HS ADIT  +
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  299  ELLNYDPDYSFEDGIEKTIEWYREH  323
             +L+Y+P++ + +G+ +T+ WY + 
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWYIDK  340

151) bpr_I2537 in NC_014387


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  219 bits (816),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 141/323 (44%), Positives = 216/323 (67%), Gaps = 13/323 (4%)

Query  14   FLVTGGAGFIGSNICEALLDMGYTVRCMDNLSTG---HIENIQPFMSN---PRFTFIEKD  67
             L+TG AGFIGS + E LL +  TV  +DN+STG   ++++++  +S+   +RF FI+ D
Sbjct  18   WLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGD  77

Query  68   IRDLDACMEATKGVDYVLNEAAWGSVPRSIEMPLLYEEINIRGTINMMEASRQNGVKKFV  127
            IR +  C  A K VDYVL++AA GSVPRS+  P+  +  NI G +NM+ A+R+  V  F 
Sbjct  78   IRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFT  137

Query  128  YASSSSVYGDSTILPKKEGQEGNVLSPYALTKKTDEEYGKLYKKLYGLDTYGLRYFNVFG  187
            YA+SSS YGD   LPK E + G  LSPYA+TK  +E Y+ ++ + Y +++ GLRYFNVFG
Sbjct  138  YAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFG  197

Query  188  RRQDPNGAYAAVIPKFLRQLMNGETPTINGDGKQSRDFTYVDNVIEGNLRACLASS-EAA  246
            RRQ+PNGAY+AVIP+ +  L+++E   INGDG  SRDF Y++NVI++NL +  ++   + 
Sbjct  198  RRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASK  257

Query  247  GEAYNIGAGGREFLIDVYHHLTDALGM------DVEPIFGPPRAGDIRDSNADISKARQN  300
               YN++ G+R  L ++Y  + D+L +        EPI+   R GD+++S+ADI+K +  
Sbjct  258  NKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTF  317

Query  301  LGYDPSYDFKAGIELAIEWYKEN  323
            L+Y+P +D+K G+  ++ WY ++
Sbjct  318  LSYEPEFDIKEGLKQTLKWYIDK  340

152) AciX9_0220 in NC_015064


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  219 bits (815),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 133/325 (41%), Positives = 217/325 (67%), Gaps = 14/325 (4%)

Query  5    LITGIAGFIGSHLAHALVRRGDSVRGLDNLSTGSLANLSDIIPGID--------FRQADL  56
            LITG+AGFIGS L + L+   ++V GLDN+STG   NL D+  ++         F Q+D+
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  57   RDAAAVEEACQGIDYILHQGALPSVPRSVKDPRTSHESNIDGTFNLLEGARAAGVKRVVY  116
            R  +  + AC+ +DY+LHQ+AL SVPRS+KDP +++ +NIDG +N+L +AR A V    Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  117  AASSSAYGNQPGFPRRETMVPQPIAPYPVQKLTGELYMRSYWQVYGLETVCLRYFNIFGP  176
            AASSS+YG++P++P+ E  + +P++PY+V K   ELY   + + Y ++++ LRYFN+FG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  177  GQTPDSPYSGVMARFILQMMRGEQPVINGDGEQGRDFTYVDNAVEANLKALTAPAEKVAG  236
             Q P+++YS+V++R IL ++++E   INGDG  +RDF Y++N ++ANL + T+       
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  237  RVFNVATGERHTLNETYSILAGLLG------HEAPPQYGPERSGDIRDSLADISAAQEAF  290
            +V+NVA G+R +LNE Y ++ + L         A P Y   R GD+++S ADI+  +  +
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  291  AYAPQVGFEEGLRRTVAWYVAQYGA  315
            +Y P+ ++ EGL++T+ WY+ + ++
Sbjct  319  SYEPEFDIKEGLKQTLKWYIDKHST  343

153) AciX8_4729 in NC_016631


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  212 bits (788),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 135/327 (42%), Positives = 210/327 (65%), Gaps = 19/327 (5%)

Query  5    LITGIAGFIGSHLAQALVERGHHVRGIDNFSTGRRENLAHIAEKVD--------LLTVDL  56
            LITG+AGFIGS L + L+   + V G+DNFSTG ++NL ++   V         ++  D+
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  57   VNADAVARACVGVDAILHQGALPSVPRSVKDPRPSHNSNLDGTFNLLEGARAAGIQRVVY  116
             +     +AC  VD +LHQ+AL SVPRS+KDP +++++N+DG +N+L +AR A +    Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  117  AASSSAYGNQPGFPRVETMAPQPIAPYPVQKLAGELYMQSYARVYGMETVCLRYFNIFGP  176
            AASSS+YG++P++P++E    +P++PY+V K   ELY + +AR Y  +++ LRYFN+FG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  177  RQTPDSPYSGVIAKFCLQMLKTGKTKDEQPTIQGDGEQGRDFTYIANAVSANLLALEAPA  236
            RQ P+++YS+VI++  L +L     KDE   I+GDG  +RDF YI N + ANLL+  +  
Sbjct  199  RQNPNGAYSAVIPRWILSLL-----KDEPIYINGDGSTSRDFCYIENVIQANLLSATTND  253

Query  237  EKIAGRVFNVACGERHSLNETYQI------LARLTGYKKPAVYTEARAGDIRDSLADISA  290
                 +V+NVA G+R SLNE Y +      L R    +  ++Y + R GD+++S ADI+ 
Sbjct  254  LASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITK  313

Query  291  AREAFGYEPIVSFEEGLAQTVAWYREQ  317
             +  ++YEP   + EGL QT+ WY ++
Sbjct  314  IKTFLSYEPEFDIKEGLKQTLKWYIDK  340

154) CCALI_02167 in NC_021487


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  211 bits (784),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 129/319 (41%), Positives = 210/319 (66%), Gaps = 14/319 (4%)

Query  11   LVTGGAGFIGAHLAKTLASQGTKVRVLDNFSSG---TLENLRGF----ER-RIDIVEGDV  62
            L+TG AGFIG+ L   L      V  LDNFS+G    L+++R      ++ R+ +++GD+
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  63   RNALACRNACRGVQVVFHLAALVSVPISIQDPIQADSVNIGGTLNMLIAARDQGVQRFVF  122
            R+   C++AC+ V+ V+H AAL SVP S++DPI ++S NI+G LNML AARD  V  F +
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  123  SSSAAVYGDTAIIPTHEDVLPKPLSPYGVQKLAGEHYAQNFTNIFGLQTVALRYFNVYGP  182
            ++S++ YGD + +P  E+ + +PLSPY+V K   E YA+ F+  + +++++LRYFNV+G 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  183  HQNPNSPYAAVIPKFISAVLEGKSPTIFGDGEQTRDFCYVGDVVRANLLAATAPSEKASG  242
            +QNPN++Y+AVIP+ I ++L + +  I GDG  +RDFCY+ +V++ANLL+AT+    +  
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  243  GVFNIAGGRQHTLNTLWQMLQSVMG------TQLCPTYAAPRTGDIRHSGADISRAESLL  296
             V+N+A G + +LN L  +++  +       ++  P Y   R GD++HS ADI++  ++L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  297  GYRPATSLEEGLRLTVEAY  315
            +Y P   + EGL+ T+  Y
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

155) Terro_2836 in NC_018014


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  208 bits (775),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 136/320 (43%), Positives = 214/320 (67%), Gaps = 15/320 (4%)

Query  2    SRVLITGGAGFIGSHLVHRFVEEGAQVRAFDNLSSGNMENLAAVR--------DRIEFIQ  53
             R LITG AGFIGS L++ ++     V ++DN+S+G  +NL  VR         R+ FIQ
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  54   GDVQDAEATAAACRDVDYVFHEGAIPSVPKSVADPLGTDSPNLRGTLQMLESARKAGVKR  113
            GD++       AC++VDYV+H++A+ SVP+S+ DP++T+S+N+ G L+ML +AR A V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  114  FIFAASSAAYGNNPVLPKREDMIPEPVSPYAVQKVASELYMGSYAQVFGLQTVALRYFNI  173
            F +AASS++YG++P LPK E+ I  P+SPYAV K  +ELY + +A+ + +++++LRYFN+
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  174  FGVRQDPTSQYSGVLARFISLMAKNECPTIFGDGETSRDFTHVDNVVQANLLAASAPAHV  233
            FG RQ+P + YS+V++R I  + K+E   I GDG TSRDF  ++NV+QANLL+A++    
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  234  S-GRVYNVATGHRVTLNHAFATIGRIMGF------EGKPQYQPEREGDIRHSVADIARAQ  286
            S  +VYNVA G+R +LN+ +  I   + +       + P Y+  R+GD++HS ADI++ +
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  287  DELGYRVTVSFEDGLGKMLR  306
              L+Y     + +GL + L+
Sbjct  316  TFLSYEPEFDIKEGLKQTLK  335

156) Terro_4284 in NC_018014


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  207 bits (770),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 131/322 (41%), Positives = 207/322 (65%), Gaps = 14/322 (4%)

Query  5    LVTGAAGFIGSHLVDALVARGERVRGLDNFATGRASNLAHVRDQID--------FTEASL  56
            L+TG AGFIGS L++ L+   + V GLDNF+TG   NL +VR  +         F ++ +
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  57   LDREPLARACEGVDVIFHQAALPSVPRSVQDPRTSHIANIEGTFELLEAARAAGVKRVVY  116
                   +AC  VD ++HQAAL SVPRS++DP +++ ANI+G +++L AAR A V    Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  117  AASSSAYGNQPGFPRVETMVPMPIAPYPVQKLAGEFYMKSYWQVYGIETVCLRYFNIFGP  176
            AASSS+YG++P++P++E  +  P++PY+V K   E+Y   + + Y ++++ LRYFN+FG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  177  RQVPDSPYSGVMAKFILQLQQGERPMIFGDGEQGRDFTYIANAIHANLLASEAPAADVAG  236
            RQ P+++YS+V+++ IL L ++E   I GDG  +RDF YI N I+ANLL++ +       
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  237  RVFNIATGERHTLNETYDVIASLLN------TTIRPQYGPDRAGDVKNSEASIAAAQEAF  290
            +V+N+A G+R +LNE Y +I   LN      +   P Y   R GDVK+S+A I+  +  +
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  291  GYNPTVNFEEGLQRTVDWYREE  312
            +Y+P  ++ EGL++T+ WY + 
Sbjct  319  SYEPEFDIKEGLKQTLKWYIDK  340

157) ACP_1490 in NC_012483


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  207 bits (768),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 131/324 (41%), Positives = 212/324 (66%), Gaps = 14/324 (4%)

Query  1    MRILITGAAGFIGSSLAKRAVAEGHSVIGVDNLITGNRENLAAIDAAID--------FRV  52
             R LITG AGFIGS+L    +   ++VIG+DN+ TG ++NL  + +++         F  
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  53   ADIRNREQMQELCRGVEIIFHEAALPSVPKSVLDPLTSHEHNVEGTVSVLLAAKEQKVRR  112
            +DIR+  + Q  C+ V+ ++H+AAL SVP+S+ DP++++  N++G +++L AA++  V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  113  VVYAASSSAYGESPTLPKHEAMIPAPISPYAVQKLTGEYYMQSFQRVYGMETVCLRYFNV  172
              YAASSS+YG+ P LPK E  I  P+SPYAV K   E Y + F R Y  +++ LRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  173  FGPFQAADSPYSGVLAKFITSLLQGEAPTIFGDGQQSRDFTYIDNVVDANFLAATAPADV  232
            FG  Q ++++YS+V+++ I SLL++E+  I GDG  SRDF YI+NV++AN+L+AT+    
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  233  VSGKVYNLACGERHSLLDTFRILAEMTGF------AGAPVFGAARNGDILHSLADISLIA  286
               KVYN+A G+R SL + + ++ +   +       + P++   R+GD+ HS ADI+ I 
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  287  REMGYQPQVNFEEGLRRTVAWYAE  310
              ++Y+P+ ++ EGL++T+ WY +
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWYID  339

158) Ftrac_1658 in NC_014759


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  205 bits (762),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 149/331 (46%), Positives = 215/331 (65%), Gaps = 22/331 (6%)

Query  1    MSQKKIIITGGAGFIGSNLVEK--YLNDDRVEKVRVIDNLSNGYYSNIEEF------ESH  52
            ++ K+ +ITG AGFIGS L+E   +LN    + V  +DN+S GY  N+++       E  
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLN----QTVIGLDNFSTGYQHNLDDVRTSVSEEQW  68

Query  53   PKFEFFKEDICDYDKMLELTGGFDLISHQAALGSVPRSIENPMQSTKVNIDGTVNILYAA  112
            ++F F++ DI  +          D + HQAALGSVPRS+ +P+ +   NIDG +N+L AA
Sbjct  69   SRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAA  128

Query  113  VQNKIDRVVLACSSSTYGDSPSLPKQEDIIGNPLSPYAVTKYAVELYAEVFQKTYGLNYV  172
             +  +     A SSSTYGD P LPK E+ IG PLSPYAVTKY  ELYA+VF ++Y +N +
Sbjct  129  RDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAI  188

Query  173  GLRYFNIFGPRQNPDNPYAAVIPIFCKAFIHGNEPTINGDGETSRDFTFVENAVHANDLA  232
            GLRYFN+FG RQNP+ +Y+AVIP    +++ ++   INGDG TSRDF ++EN ++AN L+
Sbjct  189  GLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLS  248

Query  233  LFTENKQALNQIYNVACGDQMSLNDMIGLLQELSGIDL--------KPNYGPERPGDVKH  284
              T++  + N++YNVA GD+ SLN++  L+++  G++L         P Y   R GDVKH
Sbjct  249  ATTNDLASKNKVYNVAVGDRTSLNELYYLIRD--GLNLWRNEQSRAEPIYKDFRDGDVKH  306

Query  285  SKADISKIENLLGYKPQVRFKEGLGKVYGWY  315
            S+ADI+KI  +L+Y P+  +KEGL +   WY
Sbjct  307  SQADITKIKTFLSYEPEFDIKEGLKQTLKWY  337

159) AciPR4_0573 in NC_014963


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  202 bits (751),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 140/319 (44%), Positives = 205/319 (65%), Gaps = 15/319 (4%)

Query  5    LITGVAGFIGSSIARALLAEGAEVRGLDNLSTGKLENIEQIRNGID--------FRHGdv  56
            LITGVAGFIGS++   LL     V GLDN+STG  +N++++R ++         F +GD+
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  57   qdavavadaCKGVDYVFHEAAIPSVPVSVADPVGTNGPNLIGTLQVLEAARQAGVKRVVY  116
            +       ACK VDYV+H+AA+ SVP S+ DP++TN++N+ G L++L AAR+A V    Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  117  AASSAAYGDSPELPKREDMAPAPLSAYAVQKLTGEYYLTSYAKMYGLETVSLRYFNIFGP  176
            AASS++YGD P+LPK E+    PLS+YAV K   E Y   +A+ Y +++++LRYFN+FG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  177  RQDPTSQYSGVLARFISQMLAGTKPTIFGDGSTSRDFTYIDNVVSANLLAAKSGSHVA-G  235
            RQ+P + YS+V++R I  +L +    I GDGSTSRDF YI+NV+ ANLL+A +    +  
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  236  KVFNVATGTSVTLLEAY------EEVRRITGYAGDLDFKPERVGDIKHSVADISLARKEL  289
            KV+NVA G   +L E Y       +++R     ++  +K  R GD+KHS ADI+  +  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  290  GYGVVADFAAGLEETIAWY  308
            +Y    D+  GL +T+ WY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

160) Fluta_2174 in NC_015321


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  202 bits (751),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 138/324 (43%), Positives = 204/324 (63%), Gaps = 7/324 (2%)

Query  11   LKNKTILVTGGAGFIGSNLTEALLKIGASVIVLDNLETGLQSNVDRLS------HYENYR  64
            L  K  L+TG AGFIGS L E LL +  +VI LDN+ TG Q N+D +       +   + 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  65   FVKGDICNPDDYRDLLKEVDAISNQAALGSVPRSIEFPLNTHRVNGTGFLTILHEAKQAN  124
            F++GDI +  D +   K+VD + +QAALGSVPRS+  P+ T+  N  GFL +L  A++A+
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  125  VKRFVYASSSSVYGDSIASPKHEGQEGKVLSPYAATKQLNEEYGQVYHQLHGMETIGLRY  184
            V  F YA+SSS YGD    PK E + G+ LSPYA TK +NE Y++V+ +    ++IGLRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  185  FNVFGPFQNPNGVYAAAIPKFLDKMLEGGEIVVNGDGEQSRDFTYVKNAVHANLLALISD  244
            FNVFG  QNPNG Y+A IP+ +  +L +  I +NGDG  SRDF Y+ N ++ANLL+  ++
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  245  NVEAFGKVYNVACGRSLTLNDVINSLQAELILL-GTTPKNTITYGPPRKGDIKDSLASIT  303
            ++ +  KVYNVA G   +LN++   ++  L L     ++    Y   R GD+K+S A IT
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  304  RMEQYLNYKPVYTFEEGINEYLRH  327
            ++  +L+Y P + + EG+++ L+ 
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKW  336

161) Rcas_3084 in NC_009767


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  198 bits (737),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 147/319 (47%), Positives = 205/319 (65%), Gaps = 16/319 (5%)

Query  5    LVTGGAGFIGSHLVEALLRRGDQVRVFDNFSTGRYDNLAHIRDDIE--------IIEGDL  56
            L+TG AGFIGS L+E LL   + V  +DNFSTG  +NL ++R  +         +I+GD+
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  57   RDEDAVRRAVAGVEVIFHQGALASVQRSVDDPITTNAVNVTGTLHVLTAARDAGAHRVVF  116
            R     ++A   V+ ++HQ+AL+SV RS+ DPI+TN+ N+ G L++LTAARDA      +
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  117  ASSSSVYGDTPTLPKVETQAPHPLSPYAVSKLAGEQYCMAFSSVYGLPAIALRYFNVFGP  176
            A+SSS YGD P LPK+E +  +PLSPYAV+K   E Y   F+  Y + AI+LRYFNVFG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  177  RQDPHSEYAAVIPRFIDRMVRGVPPIIYGDGLQSRDFTYIENvvdan--laaadapadcs  234
            RQ+P++ Y+AVIPR I  ++++ P  I GDG  SRDF YIENV++AN   A+++  A  +
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  235  avFNVGAGARTSLLELAAQINHLLG------SNLAPDHQPPRPGDVRHSQASIDAIRETL  288
             V+NV+ G RTSL EL   I + L       S   P  +  R GDV+HSQA I  I+  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  289  GYAPRISLTEGLARTLAWF  307
            +Y P + + EGL +TL W+
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

162) CLOAM0691 in NC_020449


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  197 bits (730),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 142/322 (45%), Positives = 210/322 (66%), Gaps = 14/322 (4%)

Query  1    MKYLVTGGAGFIGSNIVKELLKQNQEVRVLDNFATG---KRENILPLLKD---PKLTLIE  54
             + L+TG AGFIGS ++ ELL  NQ V  LDNF+TG   + +++   + +   +++ +I+
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  55   GDLRSFHIVRSAVKGVDYILHQGALPSVPRSINDPITTNDVNILGMLNILEAAKEFEVKR  114
            GD+R F   + A K VDY+LHQ+AL SVPRS++DPI+TN  NI G LN+L AA++ +V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  115  VICASSSSIYGNSEFLPKVETMPVNPMSPYALTKYTQERYCQIFYQLYGLETVSLRYFNV  174
               A+SSS YG+   LPK+E     P+SPYA+TKY +E Y ++F + Y +++++LRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  175  FGPNQDPTSQYSAVIPKFIKLMMPDKRPIIYGDGSQSRDFTYVENNVWANIQACTAEKAA  234
            FG  Q+P + YSAVIP+ I  ++ D    I GDGS SRDF Y+EN + AN+ + T++  A
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  235  G--EVINIACGESYTLLDLVKLLNEILG------KDIEPIFEKERAGDVKHSLAGIDKAK  286
            +   V N+A G+  +L +L  L+ + L          EPI+   R GDVKHS A+I K K
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  287  ELIGYEVRVDFKEGLQRTVEFY  308
             +++YE   D+KEGL++T+  Y
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWY  337

163) Memar_0700 in NC_009051


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  197 bits (731),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 132/325 (41%), Positives = 210/325 (65%), Gaps = 17/325 (5%)

Query  1    MRYIVTGGAGFIGSNLTATLA-RDHEVVIIDNLATGHQENIEHLLG------HPRVTFVE  53
             R ++TG AGFIGS L   L   ++ V+ +DN++TG Q+N++++         +R  F++
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  54   GSITDLDLLAETFPGADGVFHQAAIPSVPRSVKDPLASNEANVTGTLDVLVAAKDCGVPa  113
            G I  +     +    D V+HQAA+ SVPRS+KDP+A+N AN+ G L++L AA+D  V++
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  114  vvaassssvYGDTPALPKHEGMVPNPLSPYAVTKLADECYGKVFSDLYGIRTVSLRYFNV  173
               A+SSS YGD P LPK E  +  PLSPYAVTK  +E Y+ VF+  Y + +++LRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  174  FGPRQDPKSEYAAVIPKFITRLLAGEPPVIYGDGEQTRDFTFVADVVQANIRAMESDA--  231
            FG RQ+P++ Y+AVIP+ I  LL +EP  I GDG  +RDF ++ +V+QAN+ +  ++   
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  232  --RGVFNIAGGRRISLNQLASILME------ITGTRCDPIYEAPRAGDIRDSLADISRAR  283
                V+N+A G R SLN+L  ++ +         +R +PIY   R GD+++S ADI++ +
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  284  KAFGYDPQYSVEEGLFQAVAWFRER  308
              ++Y+P++ + EGL Q++ W+ ++
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWYIDK  340

164) Mpal_2132 in NC_011832


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 139/319 (44%), Positives = 202/319 (64%), Gaps = 21/319 (6%)

Query  4    VVTGGAGFIGSNLAEELS-KKHQVIVLDDLSTGREINLKGLDVE----------FIKGSI  52
            ++TG AGFIGS L EEL   ++ VI LD++STG + NL ++             FI+G I
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  53   TDLSLVNRVFSGVDYVFHEAALPSVQRSVENPVATNEVNIGGTLNVLMAARDQGVKKIMF  112
              ++  ++    VDYV+H+AAL SV RS+ +P+ATN  NI+G LN+L AARD  V  + +
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  113  ASSSSVYGDTPTLPKRESMTPAPMSPYAVTKLTGEHYFNVFSSLYGLKMTCLRYFNVFGP  172
            A+SSS YGD P LPK E     P+SPYAVTK   E Y +VF+  Y ++   LRYFNVFG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  173  RQDPKSQYAAVIPNFITKILNHESPIIHGDGEQTRDFTFIRDVVHANILAMES----SSE  228
            RQ+P++ Y+AVIP  I  +L++E+  I+GDG  +RDF +I +V++AN+L+  +    S +
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  229  GIFNIACDRRVSLNVLADQIMEIIGERR------ELIYDAPRSGDVRDSLADYTLAKEHL  282
             ++N+A + R SLN L   I + +  +R      E IY   R GDV++S AD T  K  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  283  NYEPGFTLLQGLEETIQWF  301
            +YEP F + +GL +T++W+
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

165) OB2082 in NC_004193


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  196 bits (729),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 137/321 (43%), Positives = 205/321 (64%), Gaps = 16/321 (4%)

Query  3    KYLVTGGAGFVGSNIVRKLISNGESVRLLDNFSTGNKNNIADINDQVE--------IISG  54
            + L+TG AGF+GS ++  L+   ++V  LDNFSTG ++N+ D+   V         +I G
Sbjct  17   RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  55   DFTNKAVVKEAMKGVDIILHQGAIPSVPKSIDNPILSNYANVNGTLTLLNAAVEEGVSRF  114
            D+ + +  + A K VD +LHQ+A+ SVP+S+ +PI +N AN++G L +L AA +  VS F
Sbjct  77   DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF  136

Query  115  VYAASSSAYGNNKRLPKQEDMIANPMSPYAVSKYTGELYCKVFYEIYGLETISLRYFNVF  174
             YAASSS+YG++  LPK E+ I+ P+SPYAV+KY  ELY  VF   Y +++I+LRYFNVF
Sbjct  137  TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVF  196

Query  175  GPRQNPHSKYAAVIPAFIESIIQNQSPIIYGDGTQSRDFTYIDNVVSan--llaataknl  232
            G RQNP++ Y+AVIP  I S++++++  I GDG+ SRDF YI+NV+ AN    ++     
Sbjct  197  GRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLAS  256

Query  233  kGEVVNIGTGTQIQLNDLVDRINNILG------KNISAIHTKDRAGDVKHSLADIQRAKD  286
            K  V N++ G +  LN+L   I + L           +I    R GDVKHS ADI + K 
Sbjct  257  KNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKT  316

Query  287  IINYEPITTFDDGLIKTVEWF  307
            +++YEP   + +GL +T+ W+
Sbjct  317  FLSYEPEFDIKEGLKQTLKWY  337

166) Acid345_3097 in NC_008009


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  194 bits (719),  Expect = 8e-51, Method: Compositional matrix adjust.
 Identities = 138/319 (44%), Positives = 197/319 (62%), Gaps = 15/319 (4%)

Query  5    LVTGAAGFIGRSIAQQLLAGGAAVRGIDNFSTGKRGNLVGLEG---------MEFIEGDI  55
            L+TG AGFIG ++ ++LL    +V G+DNFSTG + NL ++             FI+GDI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  56   TDPAAVGRACDGVEVVFHEAALASVPRSVADPLATNHANVTGTLQLLQAAHRAGVRRVIY  115
               +   +AC  V+ V+H+AAL+SVPRS+ DP+ATN AN+ G L++L AA+ A V    Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  116  AGSSSAYGDTPTLPKNEEMLANPISPYAVSKLTGEYYLRSMYAVHGMETVTIRYFNVFGP  175
            A+SSS+YGD P LPK EE ++ P+SPYAV+K   E Y          +++ +RYFNVFG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  176  YQDPGSQYSGVLAKFIPQMLRGETPTIHGDGEQSRDFTYIENVVKANIALANAPAERVAG  235
             Q+P + YS+V+++ I  +L++E   I+GDG  SRDF YIENV++AN+  A +       
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  236  EVFNVATGTRISLNETVALLREMTGYTGAVHHGPE------RKGDVKHSLADISKAKRAF  289
             V+NVA G R SLNE   L+R+        +  +E      R GDVKHS ADI+K K  +
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  290  GFEPTVMFPAGLHRTVEWY  308
            ++EP   +  GL +T+ WY
Sbjct  319  SYEPEFDIKEGLKQTLKWY  337

167) LFML04_0810 in NC_018649


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  193 bits (716),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 138/325 (43%), Positives = 215/325 (67%), Gaps = 16/325 (4%)

Query  1    MRYLVTGGAGFIGSHLVRALLENGHEVRVLDNFSTGKEENLAELS--------GRIDVIR  52
             R L+TG AGFIGS L+  LL   + V  LDNFSTG ++NL ++         +R+  I+
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  53   GDVRSFADIEKALEGVTFVFHQAAVGSVPRSIADPFDTQTANVNGTLNLLWKAKEFGVQR  112
            GD+R F+D +KA   V +V+HQAA+GSVPRS+ DP+ T++AN++G LN+L  A++  V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  113  VVIAGSSSVYGDTPGMPRVETllpsplspyalsklsQELFGKIFSKTFGLDTVTLRYFNI  172
               A+SSS YGD P++P++E  +  PLSPYA++K  +EL++ +F++++ ++++ LRYFN+
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  173  FGPRQDPRSEYAAVIPRFVRAILKKDAVTINGTGEQSRDFTFIDNVVQANLLAMETTR--  230
            FG RQ+P + Y+AVIPR + ++LK +++ ING G  SRDF +I+NV+QANLL+  T    
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  231  GIGEAFNIGCGSSFSILELVDHLSDILGV-RPEVRHLPP-----RAGDPMASQADISKAR  284
            +    +N++ G   S+ EL   + D L + R E  +  P     R GD   SQADI+K +
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  285  DLLGYSPKVYFREGLERTARWFEEK  309
             +L+Y P   ++EGL +T +W+ +K
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWYIDK  340

168) Thein_0015 in NC_015681


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  192 bits (713),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 135/301 (45%), Positives = 189/301 (63%), Gaps = 12/301 (3%)

Query  3    FLITGGAGFIGSNIAEYLLCEGYKVRVLDNFSNGIPKNLAFVEEIPGAK--ARFTLIEGD  60
             LITG AGFIGS + E LL     V  LDNFS G   NL  V    +    +RF +I+GD
Sbjct  18   WLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGD  77

Query  61   IRDFKLCEEACKGVDYVFHEAALGSVPASVEDPATYQDVNATGTLNILRAASKTGVKRLV  120
            IR F  C+ ACK VDYV+H+AALGSVP S+ DP + +  N  G LN+L AA  + V  + 
Sbjct  78   IRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFT  137

Query  121  YAGSSSAYGDSEEETPAPKREDMLPNPMSPYAVTKLSGEYFCKIFPELYGLETVILRYFN  180
            YA+SSS+YGD  +    PK E+ +  P+SPYAVTK   E +  +F+  Y ++++ LRYFN
Sbjct  138  YAASSSTYGDHPD---LPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFN  194

Query  181  VYGPRQDPKSQYAAVIPKFITALLKEETPTIFGDGEQTRDFIFVKDVVRANLLACKADKK  240
            V+G RQ+P++ Y+AVIP+ I +LLK+E   I GDG  +RDF ++ +V++ANLL+  ++  
Sbjct  195  VFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL  254

Query  241  AV-GEVINIASGKAISINELYRIIAGIIDV------DIKPNYAPSRAGDVRHSLADISKA  293
            A    V N+A G   S+NELY +I + +++         P Y   R GDV+HS ADI+K 
Sbjct  255  ASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKI  314

Query  294  R  294
            +
Sbjct  315  K  315

169) WcaG in NC_009454


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  191 bits (709),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 141/325 (44%), Positives = 211/325 (65%), Gaps = 16/325 (4%)

Query  5    LVTGGAGFIGSNLAIALVEQGHRVRVLDNFATG---SIENLRPVFKEIELYR-----GDL  56
            L+TG AGFIGS L   L+   + V  LDNF+TG   +++++R    E +  R     GD+
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  57   RNLDDVRRTAGGAEVVYHLAALPSVPRSVADPLTANEVNITGTLNVFLAARDagvrrvvy  116
            R++ D +++    + V H AAL SVPRS+ DP+++N  NI G LN++ AARDA V    Y
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  117  assssvygNSEDLPKLETMPPRPMSPYAVTKLAGENYGRVFYELYGLETVGLRYFNVFGP  176
            A+SSS YG+  DLPK+E    RP+SPYAVTK   E Y+ VF   Y ++++GLRYFNVFG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  177  RQDPRSEYAAVIPRFIDALLKGRPPVIYGDGRQSRDFTYVDDVVRASILSSEAA--GAAG  234
            RQ+P + Y+AVIPR I +LLK+ P  I GDG  SRDF Y+++V++A++LS+ +   ++  
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  235  EVFNIAAGHRISLNELLAVLTEITGI------NGDAVYAGARPGDVKHSAACIEKASAIL  288
             V+N+A G+R SLNEL  ++ +   +       ++++Y + R GDVKHS A I K  ++L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  289  GYVPLTAFKDGLRMTVEWFARKNAP  313
            +Y P   +K+GL+ T+ W+  K++ 
Sbjct  319  SYEPEFDIKEGLKQTLKWYIDKHST  343

170) galE-4 in NC_017034


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  190 bits (704),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 209/325 (65%), Gaps = 17/325 (5%)

Query  4    LIGKRVIITGGAGFIGSSITEEL-CNENEVIVIDDLSTG---RIENIQHLIKSE---KIK  56
            L  KR +ITG AGFIGS++ EEL   ++ VI +D++STG    +++++  +  E   ++ 
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  57   FIKDTITNIALLKRIFKDADYVFHQAAIPSVPRSISDPILSNEAGITGTLCVLVAAHDCG  116
            FI++ I +++  ++  K+ DYV+HQAA+ SVPRS+ DPI +N A I G L +L AA+D  
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  117  VKKVIYASSSSVYGDTPTLPKRENMASNPLSPYALTKLAGEQYCRIFNEIYGLSTISLRY  176
            V    YA+SSS YGD P LPK E+  + PLSPYA+TK   E Y  +F   Y +++I+LRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  177  FNVYGPRQDPGSEYAAVIPGFIAKTIKGEPITIYGDGEQTRDFTYIKDVVQANIRAAESS  236
            FNV+G RQ+P + Y+AVIP  I   +K+EPI I GDG  +RDF YI +V+QAN+ +A ++
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  237  ATG----YYNIAGGKRTSINEL------ADTICRIVGRKVEIRYAPPRPGDIKHSLADIT  286
              +     YN+A G RTS+NEL      +  + R    + E  Y   R GD+KHS ADIT
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  287  KAKEAFGYEPKYDLWKGLEETVGSF  311
            K K  ++YEP +D+  GL +T+  +
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

171) Mbar_A0021 in NC_007355


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  190 bits (706),  Expect = 8e-50, Method: Compositional matrix adjust.
 Identities = 134/327 (41%), Positives = 214/327 (66%), Gaps = 19/327 (5%)

Query  1    MKTKNVVVTGGMGFIGSHLTERLL-EDNEVTVIDNESTG---NIENIRHLLDHENLT---  53
            +  K  ++TG  GFIGS L E LL  ++ V  +DN STG   N++++R  + +E+ +   
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  54   VIKGSIVDLNLTE-IFKDKDYVFHLAAIPSVPRSVKDPFSSNNSNITGTLNVLTAAKDTG  112
             I+G I  +   +   K+ DYV+H AA+ SVPRS+KDP+++N++NI G LN+LTAA+D+ 
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  113  IKKLIFSSSSSVYGDTPTLPKREDMPINPMSPYAITKATGEMYCRVFQDLYDLPTVSLRY  172
            +  + +++SSS YGD P LPK E+    P+SPYA+TK   E+Y  VF   Y++ +++LRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  173  FNVFGPRQDPNSQYAAVIPKFITAILNDESPVIYGDGEQSRDFTFVKKVVDANILSCESK  232
            FNVFG RQ+PN+ Y+AVIP+ I ++L+DE+  I GDG  SRDF ++ +V++AN+LS  ++
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  233  ----KTGVFNIACGRRITINQLVDYVNEILG------KKIKSIHAEPRPGDIKHSLADIS  282
                K  V+N+A G R ++N+L   + + L        +  +I  + R GD+KHS ADI+
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  283  KAKEF-GYNPIGNFRDELKTVAEWFLN  308
            K K F +Y+P  ++++ LK    W+++
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWYID  339

172) Sinac_3916 in NC_019892


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  188 bits (698),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 130/316 (42%), Positives = 205/316 (65%), Gaps = 15/316 (4%)

Query  8    LVTGGAGFIGSHLVEALLNDGYRVRVVDNLATGHRSNLAHLE--------GRYEWLEGDL  59
            L+TG AGFIGS L+E LL     V  +DN++TG + NL ++         +R+  ++GD+
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  60   SDFEVCRRAVDGVEFVFHEAAIPSVPRSVREPLPSHASGPTATLNMLEASRQAGVKRFMF  119
              F  C++A   V++V+H+AA+ SVPRS+++P++++++   + LNML A+R+A V  F +
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  120  AASSSAYGNTVELPKHEAMFPRPLSPYAVGKLAGEHYVSVYAQTIGLDGVSLRYFNVFGP  179
            AASSS+YG+  +LPK E  + RPLSPYAV K   E Y  V+A++  +++++LRYFNVFG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  180  RQDPSSPYSGVISRFARLMSEGKRPTVNGDGSQTRDFTYVSNVVAAN-LAAMRSEKPlgg  238
            RQ+P+++YS+VI+R    +  +    +NGDGS +RDF Y+ NV+ AN L+A  ++ +   
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  239  vvlnvgtggRISLLDLVAGINKILG------TTLEPEFHPTREGDVLDSQASLDRIKEVL  292
             V NV+ G+R SL +L   I   L       +  EP +   R+GDV +SQA + +IK  L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  293  GYRPLVDFEDGLRRTL  308
            +Y P  D+ +GL++TL
Sbjct  319  SYEPEFDIKEGLKQTL  334

173) ABC0508 in NC_006582


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  187 bits (695),  Expect = 6e-49, Method: Compositional matrix adjust.
 Identities = 143/320 (45%), Positives = 206/320 (65%), Gaps = 16/320 (5%)

Query  4    YLITGGAGFIGSNIAKALVAKGEKVKILDNFNTGKKDNIAEFIDDVE--------VIDGD  55
             LITG AGFIGS +   L+   + V  LDNF+TG ++N+ +    V          I+GD
Sbjct  18   WLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGD  77

Query  56   FTNEKTVQSALKQVDVVFHQGAIPSVPKSIQNPIESNHANVSGTLQLLQGAVEARVSRFI  115
            + +    Q A K+VD V+HQ+A+ SVP+S+++PI +N AN+ G L++L +A +A+VS F 
Sbjct  78   IRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFT  137

Query  116  YAASSSAYGDSETLPKHEQLPGNPMSPYAVSKYTGELYCKVFYNLYGLETVSLRYFNVFG  175
            YAASSS+YGD   LPK E+  G P+SPYAV+KY  ELY  VF   Y +++++LRYFNVFG
Sbjct  138  YAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFG  197

Query  176  PRQDPNSKYAAVIPSFIKAMLNDKPPTIFGDGTQSRDFTFIDnvvaanllaanaPKLQGE  235
             RQ+PN+ Y+AVIP  I ++L+D P  I GDG+ SRDF +I+NV+ ANLL+A +  L + 
Sbjct  198  RRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASK  257

Query  236  SV--NIGGGASIDLNSL----VDEINVLLGKQIQAN--YGSERPGDVKHSLADIHLAEKL  287
            +   N++ G    LN L     D +N+    Q +A+  Y   R GDVKHS ADI     +
Sbjct  258  NKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTF  317

Query  288  IAYRPTVSFQEGLRQTVEWF  307
            ++Y P   ++EGL+QT+ W+
Sbjct  318  LSYEPEFDIKEGLKQTLKWY  337

174) Haur_4278 in NC_009972


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  187 bits (692),  Expect = 9e-49, Method: Compositional matrix adjust.
 Identities = 135/322 (42%), Positives = 201/322 (63%), Gaps = 18/322 (5%)

Query  3    RYLVTGGAGFIGSHLVDALLQRGDEVRVFDNFSTGYEHNLAHCINDIE--------LVRG  54
            R L+TG AGFIGS L++ LL   + V  +DNFSTGY+HNL +    +         +++G
Sbjct  17   RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  55   DLRDAEAVSQAVAGCEVIFHEGALPSVPRSVSDPLTTDAVNTGGSLHVLQAARQHGARRV  114
            D+R      +A    + ++H++AL SVPRS+ DP++T++ N +G L++L AAR+      
Sbjct  77   DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF  136

Query  115  VFAASSSVYGDTPILPKVETMAMSPKSPYAVSKMAAESYLKVFHHVYGLETVGLRYFNVF  174
             +AASSS YGD P LPK+E     P SPYAV+K   E Y  VF + Y ++++GLRYFNVF
Sbjct  137  TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVF  196

Query  175  GPRQDPTSQYSGVIARFMTLALQGEPYTMNGTGNQSRDFTYvanvvqan--llaasvpaa  232
            G RQ+P + YS+VI+R +   L++EP  +NG G+ SRDF Y+ NV+QAN    +++  A+
Sbjct  197  GRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLAS  256

Query  233  aGHVFNIACGLRISLNDV-------VAMLNKLVGKELPIIYSPARTGDVEHSLADISAAR  285
               V+N+A G R SLN++       + +  +  ++  P IY   R GDV HS ADI+  +
Sbjct  257  KNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEP-IYKDFRDGDVKHSQADITKIK  315

Query  286  QILGFEPSVDIETGIARTLDWY  307
             +L++EP  DI  G+ +TL WY
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWY  337

175) galE3 in NC_010162


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  186 bits (690),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 142/310 (46%), Positives = 192/310 (62%), Gaps = 13/310 (4%)

Query  1    MSTPRYLITGGAGFIGSNLVAALTAAGERVRVLDNLATGRWENLDGLPHQSLIER-----  55
            ++  R LITG AGFIGS L+  L    + V  LDN++TG  +NLD++      E+     
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  56   -ITGDIRDaaavataaKGVEVILHQAALGSVPRSVESPIESNSVNVGGTVTVLDVARRQG  114
             I GDIR  +    A K V+ +LHQAALGSVPRS+  PI +NS N++G + +L  AR   
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  115  VRRVLFAASSSAYGETPVLPKHEGMEPMPLSPYAVTKLACEHYMKVFAGIYGIETLSLRY  174
            V    +AASSS+YG+ P LPK E     PLSPYAVTK   E Y  VFA  Y +++++LRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  175  FNVFGPNQTPDGAYAAAIPRFVDAALQNRPIPIFGDGEQTRDFCFIENTVLANLLGATSS  234
            FNVFG  Q P+GAY+A IPR + + L++ PI I GDG  +RDFC+IEN + ANLL+AT++
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  235  K-KFKGEVINIAGGRRIGLNELCKEISRALG--RDVAVEHLPA----RAGDIRHSLADIS  287
                K  V N+A G R +LNEL   I  +L   R+      P     R GD++HS ADI+
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  288  RAAELIGYEP  297
            +   +++YEP
Sbjct  313  KIKTFLSYEP  322

176) LFE_2227 in NC_017094


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  186 bits (689),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 135/328 (42%), Positives = 212/328 (65%), Gaps = 15/328 (4%)

Query  1    MAGNTMLITGGAGFIGSNIARKLLAEGKTVAILDNLATGKRENIDDIKAHVR--------  52
            +A +  LITG AGFIGS +   LL   +TV  LDN++TG ++N+DD+++ V         
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  53   FIEGDVRDRDLLKKILPDVEVIFHQAALGSVPRSIKDPFETQSANVDGTMAILWEAKHAG  112
            FI+GD+R     +K   +V+ ++HQAALGSVPRS+KDP+ T+SAN+DG + +L  A++A 
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  113  VRRVTIAGSSSVYGDAPGMPRVETIVPSPLSPYALTKMSQEHLGAIFSKTYGLECVTLRY  172
            V   T A+SSS YGD P++P++E  +  PLSPYA+TK  +E  + +F+++Y ++ + LRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  173  FNIFGPFQDPQSEYAAVIPRFITKIIKNEPITIYGDGLQSRDFTFIDNVVSANLLAARTK  232
            FN+FG  Q+P++ Y+AVIPR I  ++K+EPI I GDG  SRDF +I+NV+ ANLL+A T+
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  233  --TGIGQAANIGCG-----AQFTlldlveelkkllGKPNVAIDFQPPRAGDPRESRADIK  285
              ++  +  N++ G      ++  L           ++     ++  R GD ++S+ADI 
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  286  KAEELLGYRPLVDFSEGLKRTVEWFKAR  313
            K   +L+Y P  D+ EGLK+T+ W+  +
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

177) SCE1572_22620 in NC_021658


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  185 bits (685),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 138/310 (45%), Positives = 191/310 (62%), Gaps = 13/310 (4%)

Query  1    MSTPRYLVTGGAGFIGSNLVAALTAAGERVRVLDNLATGRWENLDGLPHQSSIER-----  55
            ++  R L+TG AGFIGS L+  L    + V  LDN++TG  +NLD++    S E+     
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  56   -ITGDIRDaaavaaaaKGVEVILHQAALGSVPRSVETPVESNAVNVGGTVTVLDVARRQG  114
             I GDIR  +    A K V+ +LHQAALGSVPRS+  P+ +N+ N++G + +L  AR   
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  115  VRRVIFAASSSAYGETPVLPKHEAMEPMPLSPYAVTKLACEHYMKVFAGIYGIETLSLRY  174
            V    +AASSS+YG+ P LPK E     PLSPYAVTK   E Y  VFA  Y +++++LRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  175  FNVFGPNQTPDGAYAAAIPRFIDAALQNRSIPIYGDGEQTRDFCFIENTVLANLLGATSP  234
            FNVFG  Q P+GAY+A IPR I + L++ +I I GDG  +RDFC+IEN + ANLL+AT+ 
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  235  K-KFKGEIINIAGGRRIGLNELCREISRVLG-RDVAIEHLPP-----RAGDIRHSLADIS  287
                K  + N+A G R +LNEL   I   L  +     +  P     R GD++HS ADI+
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  288  RAAELIGYEP  297
            +   +++YEP
Sbjct  313  KIKTFLSYEP  322

178) Dtox_2855 in NC_013216


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  182 bits (676),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 145/322 (46%), Positives = 212/322 (66%), Gaps = 16/322 (4%)

Query  1    MRCLVTGGAGFIGSNLVHTLINEGYKVRVLDNFSTG---KFENIETVIKNID-----LIV  52
             R L+TG AGFIGS L++ L+     V  LDNFSTG   +++++ T + + +     +I 
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  53   GDLCREDDVRRAVKGVDIVFHQAALPSVPRSVADPYTTNRVNIEGTLNVFLAARDSGVKR  112
            GD+ +  D ++A K VD V+HQAAL SVPRS+ DP +TN  NI+G LN++ AARD+ V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  113  vvyassssvygsNEKLPKEETMLTRPMSPYAASKLAKEVYGRIFYDLYGLETVGLRYFNV  172
              YA+SSS YG +  LPK E  + RP+SPYA +K  +E+Y+ +F   Y ++++GLRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  173  FGPRQNPESQYAAVIPKFITALLKGKSPDIYGDGEQSRDFTYISDVVKANLLAARGS--G  230
            FG RQNP++ Y+AVIP+ I +LLK+ +  I GDG  SRDF YI +V++ANLL+A  +  +
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  231  AAGEVFNIARGTkinlne------llnllkkiTGSKAEAAYAASRPGDVKHSLAAIEKAQ  284
            +   V+N+A G + +LNE          L +   S+AE+ Y   R GDVKHS A I K +
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  285  SILGYQPEVSLEAGLRQTVAWF  306
            ++L+Y+PE  +  GL+QT+ W+
Sbjct  316  TFLSYEPEFDIKEGLKQTLKWY  337

179) Plabr_4445 in NC_015174


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  182 bits (676),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 135/325 (42%), Positives = 202/325 (63%), Gaps = 22/325 (6%)

Query  30   KTYLVTGGAGFIGSHLASALVAQGNQVRVFDNLCTGRKKNLAHLD--------GQFEWIH  81
            K  L+TG AGFIGS L   L+   + V  +DN+ TG + NL ++         ++F  I+
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  82   GDVRDLAAVEKAVAGVDVVYHQAALASVPLSIEKPLEVHDVCVTGTVNVLDAARRLGVKR  141
            GD+R ++  +KA   VD V HQAAL+SVP S+  P+  +   + G +N+L AAR   V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  142  VVYAASSAAYGDRPEMPKRESHTPQTLSPYAAAKLAAELYCESFAECYDLETVRLRYFNV  201
              YAASS++YGD+P++PK E +  + LSPYA +K   ELY + FA  Y+++++ LRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  202  FGPRQDPNSPYSAVIPLFVTALLQGKTPRIFGDGSQSRDFVYVGDVVQANLLAGHAD--G  259
            FG RQ+PN++YSAVIP  + +LL++    I GDGS SRDF Y+ +V+QANLL++ ++  +
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  260  ASGNVYNVATGERVSVAEMLKQICDVLDV---------PFMPEFCPPRAGEVMHSWADIS  310
            +  +VYNVA G+R S+ E+   I D L++         P+  +F   R G+V HS ADI+
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDF---RDGDVKHSQADIT  312

Query  311  ATQRDLGYSPATPFATGLAKTVEAY  335
              +  L+Y P   +  GL +T+  Y
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

180) AciPR4_0105 in NC_014963


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  181 bits (671),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 136/323 (43%), Positives = 206/323 (64%), Gaps = 15/323 (4%)

Query  5    LITGAAGFIGSHLVDALVQRGDLEVRGLDNLVTGQRSNLDT--------SWKEIDFYQID  56
            LITG AGFIGS L++ L+   +  V GLDN+ TG + NLD          W  + F Q D
Sbjct  19   LITGVAGFIGSGLLEELLFLNQ-TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGD  77

Query  57   LNDAEGLREAVAGVDTIFHEAALPSVPRSVQDPRTSHIANVEGTFNLLEAARAAGVRRIV  116
            +    + + A   VD ++H+AAL SVPRS++DP +++ AN++G +N+L AAR A V  + 
Sbjct  78   IRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFT  137

Query  117  YAASSSAYGDQPGFPRVETMRPEPISPYAVQKLTAELYLQSYFRVYGMETVCLRYFNIFG  176
            YAASSS+YGD+P++P++E     P+SPYAV K   ELY + + R Y  +++ LRYFN+FG
Sbjct  138  YAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFG  197

Query  177  PRQAADSPYSGVMAKWITTLLEGGTPRINGDGEQGRDFTYvanvvhanllaaETPKDAIA  236
             RQ ++++YS+V+++WI +LL +    INGDG  +RDF Y+ NV++ANLL+A T   A  
Sbjct  198  RRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASK  257

Query  237  GRVFNIACGERHTLNATYALMARLLNSSTKPEHGPE------RAGDVKDSLASIEASREA  290
             +V+N+A G+R +LN  Y L+   LN   + +  +E      R GDVK+S A I   +  
Sbjct  258  NKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTF  317

Query  291  FGYSVVVDFEEGLRRTVEWYQQQ  313
            ++Y    D+ EGL++T+ WY ++
Sbjct  318  LSYEPEFDIKEGLKQTLKWYIDK  340

181) Mfer_0810 in NC_014658


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  181 bits (671),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 132/325 (41%), Positives = 211/325 (65%), Gaps = 23/325 (7%)

Query  4    MKDKKIVITGGLGFIGSHLANELS-KNNEVTVIDNGSTGDLKNLENENIEVIMKD-----  57
            +  K+ +ITG  GFIGS L +EL   N+ V  +DN STG   NL++    V   +     
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  58   INEVNLKKIFE------DKDYVFHHAAIASVPRSIENPIECHKVNVTGSLKVLLAARDTD  111
            + + +++K+ +      + DYV+H+AA++SVPRS+ +PI  +  N+ G L++L AARD++
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  112  VKKVINASSSAVYGDNPNLPLSEDDSLNPLSPYAASKASSELYCKVFNEVYGLKTVSLRY  171
            V     A+SS+ YGD+P+LP  E+    PLSPYA +K  +ELY  VF   Y +++++LRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  172  FNVFGPKQNPHSQYAAVIPKFIYKMIKNEPPKIYGDGTQTRDFIYVKDVVKIN-IKVAES  230
            FNVFG +QNP++ Y+AVIP+ I  ++K+EP  I GDG+ +RDF Y+ +V++ N +  + +
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  231  NFTG---VLNVARGESISVNKLFRLIKEILDV------EVEPIYTDPRPGDIKHSWADIS  281
            ++++   V NVA G+  S+N L+ LI++ L++        EPIY D R GD+KHS ADI+
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  282  LLKSKLKFKPG-NFKEQLKETIEWF  305
             +K+ L + P  ++KE LK+T+ W+
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWY  337

182) RoseRS_2395 in NC_009523


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  179 bits (663),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 145/322 (46%), Positives = 208/322 (65%), Gaps = 16/322 (4%)

Query  5    LVTGGAGFIGSHLVEALLRRGERVRVFDNFSTGRHENVKHLHDDIE--------LIEGDL  56
            L+TG AGFIGS L+E LL   + V  +DNFSTG ++N+ +++  +         +I+GD+
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  57   RDFDavrravagvevvFHQAALASVQRSVDDPMTTNAVNVTGTLHVLMAARDAGvrrvvf  116
            R F   ++A   V+ V+HQAAL+SV RS+ DP++TN+ N+ G L++L AARDA V    +
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  117  assssvYGDTPTLPKVETQAPQPLSPYAVSKLAGEQYCMAFSVVYGLPSIALRYFNVFGP  176
            A+SSS YGD P LPK+E +  +PLSPYAV+K   E Y   F+  Y + +I+LRYFNVFG 
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGR  198

Query  177  RQDPHSEYAAVIPRFIDRMVRGLPPIIYGDGLQSRDFTYIEnvvdan--laaadapaSCS  234
            RQ+P++ Y+AVIPR I  ++++ P  I GDG  SRDF YIENV++AN   A+++  AS +
Sbjct  199  RQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258

Query  235  TVFNVGAGERTSLLDLAAQINHVLG------SRLTPDHHPPRAGDVRHSLASIEAISQTL  288
             V+NV+ G+RTSL +L   I + L       SR  P     R GDV+HS A I  I   L
Sbjct  259  KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL  318

Query  289  GYAPRITLAEGLARTIEWFRSR  310
            +Y P + + EGL +T+ W+  +
Sbjct  319  SYEPEFDIKEGLKQTLKWYIDK  340

183) Desti_1226 in NC_018025


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  178 bits (661),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 147/335 (44%), Positives = 210/335 (63%), Gaps = 16/335 (4%)

Query  1    MTMNRSRRLILVTGGAGFIGSHLVEGLLERGEAVRVLDNLSTGKQENL----MGLGNGRW  56
            + +   R+LI  TG AGFIGS L+E LL   ++V  LDN+STG Q+NL     ++++ +W
Sbjct  11   LVLAPKRWLI--TGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQW  68

Query  57   NAHRDFEFILGDIRDRKIVQTAMNGVDAVFHQAALGSVPRSVTDPVTTQEVNADGTLNIL  116
            +    F FI GDIR     Q A + VD V+HQAALGSVPRS+ DP++T+  N DG LN+L
Sbjct  69   SR---FIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNML  125

Query  117  QSARDagvsrvvyassssvygnsELLPKREGEEGLTLSPYALTKRVNEEYGRLFMGLYAF  176
             +ARDA VS   YA+SSS YG+   LPK E   G  LSPYA+TK VNE Y+ +F   Y F
Sbjct  126  TAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEF  185

Query  177  ETIGLRYFNVYGPRQDPESEYAAVIPRFVTALLKKSEPIIYGTGLQSRDFTFVKDVVRAN  236
            ++IGLRYFNV+G RQ+P++ Y+AVIPR + +LLK     I G G  SRDF ++ +V++AN
Sbjct  186  NAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQAN  245

Query  237  ILALEAPPFAC-GRSFNIGCGTQATlle------llsalqdllGTNIEPRFESPRAGDVM  289
            +L+  +  +A   + +N++ G +++L E          L     +  EP +   R GDV 
Sbjct  246  LLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVK  305

Query  290  HSSADTGLSEKMLGFKAEFDLRLGLAQSIAWYREN  324
            HS AD       L++ +EFD++ GL Q++ WY ++
Sbjct  306  HSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340

184) Terro_1237 in NC_018014


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  175 bits (647),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 133/325 (41%), Positives = 206/325 (64%), Gaps = 14/325 (4%)

Query  3    RYLITGIAGFIGSSLAHELLRQGHDVTGVDNLSGGDIRNLDGIIREIDLH-----IMDVN  57
            R LITG+AGFIGS+L +ELL   + V G+DN+S G  +NLD++   +  +     I    
Sbjct  17   RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  58   ETDRLRKC---CIGADFLLHQAALASVQRSIDDPQLTHASNVNGTLSVLIaardarvsrv  114
            +  ++  C   C   D++LHQAAL+SV RS+ DP  T+++N++G L++L AARDA+VS  
Sbjct  77   DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF  136

Query  115  vyaasssayGNKSQQAKCEDMLPDPLSPYAAQKLSGEHLVRSFSRVYGMEGVCLRYFNVF  174
             YAASSS+YG+ ++ +K E+ +  PLSPYA  K   E     F+R Y  +++ LRYFNVF
Sbjct  137  TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVF  196

Query  175  GPRQGADSPYSGAIAKFISMMLKGETPLIFGDGSQSRDFTYIDNVVSANLLACGAPACDV  234
            G RQ ++++YS+ I++ I  +LK+E   I GDGS SRDF YI+NV+ ANLL+  +     
Sbjct  197  GRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLAS  256

Query  235  SGQVFNVGGGRSYTLNQTYDLLARHLCFPHG------PRYTAPRVGDIQHSEADLTRSMQ  288
              +V+NV+ G   +LN+ Y L+   L + +       P Y   R GD++HS+AD+T+   
Sbjct  257  KNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKT  316

Query  289  MLSYVPLASFADGIARTVQWFLTNE  313
             LSY P   + +G+ +T++W++ ++
Sbjct  317  FLSYEPEFDIKEGLKQTLKWYIDKH  341

185) Mthe_0136 in NC_008553


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 135/320 (43%), Positives = 197/320 (62%), Gaps = 17/320 (5%)

Query  4    KKIAVTGGAGFIGSNIVRAL-CDENDVTVIDNMST--------grrenlrglegrirFVE  54
            K+  +TG AGFIGS ++  L   ++ V  +DN ST         R        +R+ F++
Sbjct  16   KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ  75

Query  55   CDINDIKMLKREFESVDYVLHQAALPSVQRSIMDPMATNRSNIDGTLSVLVAAMDCGVKR  114
             DI  +   ++   +VDYVLHQAAL SV RS+ DP+ATN +NIDG L++L AA D  V  
Sbjct  76   GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS  135

Query  115  VVFASSSAVYGDSPELPKRESLIPRPMSPYAVTKLVGEHYCRVFYEIYGIECVSLRYFNV  174
              +A+SS+ YGD P+LPK E  I RP+SPYAVTK V E Y  VF   Y ++ ++LRYFNV
Sbjct  136  FTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV  195

Query  175  FGPGQDPASEYAAVIPKFIDAVLSGSQPVVYGDGEQTRDFVYVDDVVRANILACLSP--G  232
            FG  Q+P + Y+AVIP+ I ++L +    + GDG  +RDF Y+++V++AN+L+  +   +
Sbjct  196  FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA  255

Query  233  APGLAINIGTGYATSLNRL--LDAIGRVLKRYIH----PIYTEPRPGDVRDSVADITLAR  286
            +     N++ G  TSLN L  L   G  L R  +    PIY + R GDV++S ADIT  +
Sbjct  256  SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK  315

Query  287  EVLGYAPEYGLEDGLNEMLK  306
              L+Y PE+++ +GL++ LK
Sbjct  316  TFLSYEPEFDIKEGLKQTLK  335

186) gmd in NC_002607


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  172 bits (637),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 134/320 (42%), Positives = 200/320 (63%), Gaps = 17/320 (5%)

Query  5    LVTGVAGFIGSHLAAALLDRGYDVRGVDNFATGHDQNLEPLRGT------GDFSFYEADI  58
            L+TGVAGFIGS L   LL     V G+DNF+TG ++NL+ +R +      + F F ++DI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  59   RDADLVADVTNGVDYVFHQAADSSVPRSVEDPVTTTDVNCTGTATVIDAAREadvdtvvv  118
            R         + VDYV+HQAA +SVPRS+ DP++T   N  G   ++ AAR+A+V +   
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  119  assaaIYGSTETFPKVESMTEQPESPYALSKHYTEKLALQA-SELYDIDTAALRYFNIYG  177
            A+S++ YG    +PK+E    +P SPYA++K Y + L  +  +  Y++++ +LRYFN++G
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTK-YVNELYADVFARSYEFNAIGLRYFNVFG  197

Query  178  PRQDPNGDYAAVIPKFISLMLDGERPVIYGDGEQSRDFTFIDNAIQANIRAAEGD---VT  234
             RQ+PNG Y+AVIP+ I  +L +E   I GDG  SRDF +I+N IQAN+ +A  +     
Sbjct  198  RRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASK  257

Query  235  GEAFNVGCGGRvtvne------lvdvlndlldtdIDPIYDDPRPGDVRHSHADISKAREL  288
               +NV+ G+R ++NE          L    ++  +PIY D R GDV+HS+ADI+K + +
Sbjct  258  NKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTF  317

Query  289  LSYEPEVGFSEGLEQTIPYY  308
            LSYEPE ++ EGL QT+  Y
Sbjct  318  LSYEPEFDIKEGLKQTLKWY  337

187) gmd in NC_010364


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  172 bits (637),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 134/320 (42%), Positives = 200/320 (63%), Gaps = 17/320 (5%)

Query  5    LVTGVAGFIGSHLAAALLDRGYDVRGVDNFATGHDQNLEPLRGT------GDFSFYEADI  58
            L+TGVAGFIGS L   LL     V G+DNF+TG ++NL+ +R +      + F F ++DI
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI  78

Query  59   RDADLVADVTNGVDYVFHQAADSSVPRSVEDPVTTTDVNCTGTATVIDAAREadvdtvvv  118
            R         + VDYV+HQAA +SVPRS+ DP++T   N  G   ++ AAR+A+V +   
Sbjct  79   RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138

Query  119  assaaIYGSTETFPKVESMTEQPESPYALSKHYTEKLALQA-SELYDIDTAALRYFNIYG  177
            A+S++ YG    +PK+E    +P SPYA++K Y + L  +  +  Y++++ +LRYFN++G
Sbjct  139  AASSSTYGDHPDLPKIEERIGRPLSPYAVTK-YVNELYADVFARSYEFNAIGLRYFNVFG  197

Query  178  PRQDPNGDYAAVIPKFISLMLDGERPVIYGDGEQSRDFTFIDNAIQANIRAAEGD---VT  234
             RQ+PNG Y+AVIP+ I  +L +E   I GDG  SRDF +I+N IQAN+ +A  +     
Sbjct  198  RRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASK  257

Query  235  GEAFNVGCGGRvtvne------lvdvlndlldtdIDPIYDDPRPGDVRHSHADISKAREL  288
               +NV+ G+R ++NE          L    ++  +PIY D R GDV+HS+ADI+K + +
Sbjct  258  NKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTF  317

Query  289  LSYEPEVGFSEGLEQTIPYY  308
            LSYEPE ++ EGL QT+  Y
Sbjct  318  LSYEPEFDIKEGLKQTLKWY  337

188) Mpsy_0543 in NC_018876


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  172 bits (636),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 133/331 (41%), Positives = 212/331 (65%), Gaps = 19/331 (5%)

Query  1    MKDKKVIVTGGMGFIGSHLTEKLL-ENNEVTVIDNEATG---KIDNIKHLLENKNLT---  53
            +  K+ ++TG  GFIGS L E LL  N+ V  +DN +TG   ++D+++  + + + +   
Sbjct  13   LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI  72

Query  54   IVHESIIEL-DLHEIFKGKDYVFHLAAIPSVPRSVKDPFASNEANVTGTLKVLIAAKDSG  112
            +++  I  + D +   K  DYV+H AA+ SVPRS+KDP+A+N AN+ G L++L AA+D+ 
Sbjct  73   FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH  132

Query  113  VKKVIFsssssVYGDTPTLLKREDMPVNPQSPYAITKATGEMYCRVFQELYGLPTICLRY  172
            V    +++SSS YGD P L K E+    P SPYA+TK   E+Y  VF   Y + +I LRY
Sbjct  133  VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRY  192

Query  173  FNVFGPRQDPNSQYAAVIPKFITGIMNDESPVIYGDGEQSRDFTYVKHVVVANILSCESN  232
            FNVFG RQ+PN+ Y+AVIP+ I ++++DE+  I GDG  SRDF Y+ +V+ AN+LS  +N
Sbjct  193  FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252

Query  233  ETG----IFNIACSRRITINELVAYINEIL----GKDIITENI--DSRPGDIKHSLADIS  282
            + +    ++N+A + R ++NEL   I + L      +  +E I  D R GD+KHS ADI+
Sbjct  253  DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADIT  312

Query  283  RAGKF-GYNPVGDFRDELKKVIQWFENKRNN  312
            +   F +Y+P  D+++ LK+ ++W+ +K++ 
Sbjct  313  KIKTFLSYEPEFDIKEGLKQTLKWYIDKHST  343

189) AciX8_3528 in NC_016631


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  162 bits (599),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 139/327 (43%), Positives = 202/327 (62%), Gaps = 20/327 (6%)

Query  3    RYFITGIAGFIGSSLARALLASGHEVRGVdnlscsdssnlsdilsdid--------FCQM  54
            R +ITG+AGFIGS+L   LL   + V G+DN+S +   NL D+ + +         F Q 
Sbjct  17   RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG  76

Query  55   DI---NETDRLCDFMRGVDFVLHEAALASVPRSINDPMSSHTANATGTLSVLMAAQTagv  111
            DI    + ++ C   + VD+VLH+AAL+SVPRS++DP+++++AN  G L++L AA+ A V
Sbjct  77   DIRKFTDCQKAC---KNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHV  133

Query  112  srvvyaasssaygDQEAHPKHESMCPAPLSPYAVQKLAGENYVKSFWAVHGLEGVCLRYF  171
            S   YAASSS+YGD+   PK E     PLSPYAV K   E Y   F     ++++ LRYF
Sbjct  134  SSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYF  193

Query  172  NVFGPGQAADSPYSGVIARFITDMLAGEQSTIFGDGFQSRDFTYVANVVSANLLACQAPR  231
            NVFG  Q ++++YS+VI+R I  +L +E   I GDG  SRDF Y+ NV+ ANLL+  +  
Sbjct  194  NVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTND  253

Query  232  EAVAGEVFNVGTGRSQTLNTLYATLARILDF------QAAPTYKKMRAGDVFQSQADISR  285
             A    V+NV+ G   +LN LY  +   L++      +A P YK  R GDV +SQADI++
Sbjct  254  LASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITK  313

Query  286  ARSALGYSPTHTFEQGLEETVSWYIQK  312
             ++ L+Y P   + +GL +T+ WYI+K
Sbjct  314  IKTFLSYEPEFDIKEGLKQTLKWYIDK  340

190) Isop_3753 in NC_014957


> NC_003198_P9|137|G124|16763122|NP_458739.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|112059..113105|tviC|-|Vi 
polysaccharide biosynthesis protein, epimerase
Length=348

 Score =  136 bits (499),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 115/253 (46%), Positives = 165/253 (66%), Gaps = 11/253 (4%)

Query  16   LVTGGAGFIGSHLVEALLARGWQVRVLDNFSSG---QLANLKP------WLDRIELLEGD  66
            L+TG AGFIGS L+E LL     V  LDNFS+G   +L +++       W  R+ +++GD
Sbjct  19   LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQW-SRFIFIQGD  77

Query  67   AADPVLAARACREVEVVFHQAAIPSVPKSVLDPIATHHAGPTATLTMLQaaraagarrfi  126
                    +AC++V+ V+HQAA+ SVP+S+ DPIAT+ A   + L ML AAR A    F 
Sbjct  78   IRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFT  137

Query  127  faasssaYGDTPTLPKHEAMLPQPLSPYAASKLAGEHYVAAFARSMGLDGVSLRYFNIFG  186
            +AASSS+YGD P LPK E  + +PLSPYA +K   E Y   FARS  +++++LRYFN+FG
Sbjct  138  YAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFG  197

Query  187  PRQDPSSPYSGVISRFHLVMSHGAPPTIYGDGTQTRDFTavanavhanllaadhPQ-ALR  245
             RQ+P+++YS+VI+R  L +  + P  I GDG+ +RDF  + N ++ANLL+A   + A +
Sbjct  198  RRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASK  257

Query  246  GAVLNVGTGQRTS  258
              V NV+ G+RTS
Sbjct  258  NKVYNVAVGDRTS  270