> NC_003198_P9|136|G123|16763121|NP_458738.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|109540..112035|tviD|-|Vi
polysaccharide biosynthesis protein
Length=831
Score = 1304 bits (4947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 831/831 (100%), Positives = 831/831 (100%), Gaps = 0/831 (0%)
Query 1 MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGL 60
MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGL
Sbjct 1 MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGL 60
Query 61 IDIPEKVRPFIFRPNVNYSNTDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFF 120
IDIPEKVRPFIFRPNVNYSNTDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFF
Sbjct 61 IDIPEKVRPFIFRPNVNYSNTDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFF 120
Query 121 SQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIEQDMM 180
SQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIEQDMM
Sbjct 121 SQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIEQDMM 180
Query 181 EIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMEKWGQ 240
EIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMEKWGQ
Sbjct 181 EIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMEKWGQ 240
Query 241 KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQL 300
KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQL
Sbjct 241 KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQL 300
Query 301 ADGDIIAASQQLFAALRNQQQDPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTL 360
ADGDIIAASQQLFAALRNQQQDPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTL
Sbjct 301 ADGDIIAASQQLFAALRNQQQDPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTL 360
Query 361 RCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGSADALQLFDKSYHYWKRVLLL 420
RCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGSADALQLFDKSYHYWKRVLLL
Sbjct 361 RCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGSADALQLFDKSYHYWKRVLLL 420
Query 421 NPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH 480
NPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH
Sbjct 421 NPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH 480
Query 481 ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNT 540
ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNT
Sbjct 481 ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNT 540
Query 541 ALSLHSVDDFVslstslaysysaFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENIL 600
ALSLHSVDDFVSLSTSLAYSYSAFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENIL
Sbjct 541 ALSLHSVDDFVSLSTSLAYSYSAFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENIL 600
Query 601 AGAKIVWPLLKFDPVGTVYCARTLVNLGAWKDACTLAHMTLIRNSNITSLQSIMLRSIRH 660
AGAKIVWPLLKFDPVGTVYCARTLVNLGAWKDACTLAHMTLIRNSNITSLQSIMLRSIRH
Sbjct 601 AGAKIVWPLLKFDPVGTVYCARTLVNLGAWKDACTLAHMTLIRNSNITSLQSIMLRSIRH 660
Query 661 INNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSV 720
INNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSV
Sbjct 661 INNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSV 720
Query 721 LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSEnayalk 780
LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALK
Sbjct 721 LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALK 780
Query 781 yaalnaMHLRDYTQALQYWQRLEKVNGPTEPVTRQISTCITALQKNTSGKS 831
YAALNAMHLRDYTQALQYWQRLEKVNGPTEPVTRQISTCITALQKNTSGKS
Sbjct 781 YAALNAMHLRDYTQALQYWQRLEKVNGPTEPVTRQISTCITALQKNTSGKS 831 |