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Homologs of HPB8_708 gene of NC_014256_P1

6

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPB8_708
( YP_003728729.1 )

hypothetical protein

NC_014256
(Helicobacter pylori B8)

4e-31

100

2) C694_02760
( YP_006934458.1 )

cag pathogenicity island protein R

NC_018939
(Helicobacter pylori 26695)

5e-30

95

3) C695_02760
( YP_006893023.1 )

cag pathogenicity island protein R

NC_018937
(Helicobacter pylori Rif1)

5e-30

95

4) C730_02760
( YP_006936064.1 )

cag pathogenicity island protein R

NC_018938
(Helicobacter pylori Rif2)

5e-30

95

5) cagR
( YP_002301176.1 )

cag pathogenicity island protein R

NC_011498
(Helicobacter pylori P12)

9e-30

96

6) HPSH112_04365
( YP_006227567.1 )

cag pathogenicity island protein R

NC_017741
(Helicobacter pylori Shi112)

1e-24

83

• Sequence Alignments

1) HPB8_708 in NC_014256


> NC_014256_P1|13|G13|298736203|YP_003728729.1|Helicobacter_pylori_B8|-|11916..12218|-|HPB8_708|hypothetical 
protein
Length=100

 Score =  127 bits (466),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 100/100 (100%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  1   MFLILSNPFFSTSAIKFLILSIGKLNFFPNASLSPiinirknkkfniienkSLDKPVKRF  60
           MFLILSNPFFSTSAIKFLILSIGKLNFFPNASLSPIINIRKNKKFNIIENKSLDKPVKRF
Sbjct  1   MFLILSNPFFSTSAIKFLILSIGKLNFFPNASLSPIINIRKNKKFNIIENKSLDKPVKRF  60

Query  61  VPPPNKEAKIFPILNPFIFGCVSSCLFGSLMRVLVGSISQ  100
           VPPPNKEAKIFPILNPFIFGCVSSCLFGSLMRVLVGSISQ
Sbjct  61  VPPPNKEAKIFPILNPFIFGCVSSCLFGSLMRVLVGSISQ  100

2) C694_02760 in NC_018939


> NC_014256_P1|13|G13|298736203|YP_003728729.1|Helicobacter_pylori_B8|-|11916..12218|-|HPB8_708|hypothetical 
protein
Length=100

 Score =  124 bits (453),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 95/100 (95%), Positives = 99/100 (99%), Gaps = 0/100 (0%)

Query  1   MFLILSNPFFNTSAIKFLILSIGKLNFFPNISLSPiinirknkkfniienkSLDKPVKRF  60
           MFLILSNPFF+TSAIKFLILSIGKLNFFPN SLSPIINIRKNKKFNIIENKSLDKPVKRF
Sbjct  1   MFLILSNPFFSTSAIKFLILSIGKLNFFPNASLSPIINIRKNKKFNIIENKSLDKPVKRF  60

Query  61  VPPPNKEAKIFPMISPFIFGCVSSCLFGSLMRVLVGSISQ  100
           VPPPNKEAKIFP+++PFIFGCVSSCLFGSLMRVLVGSISQ
Sbjct  61  VPPPNKEAKIFPILNPFIFGCVSSCLFGSLMRVLVGSISQ  100

3) C695_02760 in NC_018937


> NC_014256_P1|13|G13|298736203|YP_003728729.1|Helicobacter_pylori_B8|-|11916..12218|-|HPB8_708|hypothetical 
protein
Length=100

 Score =  124 bits (453),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 95/100 (95%), Positives = 99/100 (99%), Gaps = 0/100 (0%)

Query  1   MFLILSNPFFNTSAIKFLILSIGKLNFFPNISLSPiinirknkkfniienkSLDKPVKRF  60
           MFLILSNPFF+TSAIKFLILSIGKLNFFPN SLSPIINIRKNKKFNIIENKSLDKPVKRF
Sbjct  1   MFLILSNPFFSTSAIKFLILSIGKLNFFPNASLSPIINIRKNKKFNIIENKSLDKPVKRF  60

Query  61  VPPPNKEAKIFPMISPFIFGCVSSCLFGSLMRVLVGSISQ  100
           VPPPNKEAKIFP+++PFIFGCVSSCLFGSLMRVLVGSISQ
Sbjct  61  VPPPNKEAKIFPILNPFIFGCVSSCLFGSLMRVLVGSISQ  100

4) C730_02760 in NC_018938


> NC_014256_P1|13|G13|298736203|YP_003728729.1|Helicobacter_pylori_B8|-|11916..12218|-|HPB8_708|hypothetical 
protein
Length=100

 Score =  124 bits (453),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 95/100 (95%), Positives = 99/100 (99%), Gaps = 0/100 (0%)

Query  1   MFLILSNPFFNTSAIKFLILSIGKLNFFPNISLSPiinirknkkfniienkSLDKPVKRF  60
           MFLILSNPFF+TSAIKFLILSIGKLNFFPN SLSPIINIRKNKKFNIIENKSLDKPVKRF
Sbjct  1   MFLILSNPFFSTSAIKFLILSIGKLNFFPNASLSPIINIRKNKKFNIIENKSLDKPVKRF  60

Query  61  VPPPNKEAKIFPMISPFIFGCVSSCLFGSLMRVLVGSISQ  100
           VPPPNKEAKIFP+++PFIFGCVSSCLFGSLMRVLVGSISQ
Sbjct  61  VPPPNKEAKIFPILNPFIFGCVSSCLFGSLMRVLVGSISQ  100

5) cagR in NC_011498


> NC_014256_P1|13|G13|298736203|YP_003728729.1|Helicobacter_pylori_B8|-|11916..12218|-|HPB8_708|hypothetical 
protein
Length=100

 Score =  123 bits (450),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 96/100 (96%), Positives = 99/100 (99%), Gaps = 0/100 (0%)

Query  1   MFLILLNPFFSTSAIKFLILSIGKLNFFPNASLSPiinirknkkfniienkSLDKPVKRF  60
           MFLIL NPFFSTSAIKFLILSIGKLNFFPNASLSPIINIRKNKKFNIIENKSLDKPVKRF
Sbjct  1   MFLILSNPFFSTSAIKFLILSIGKLNFFPNASLSPIINIRKNKKFNIIENKSLDKPVKRF  60

Query  61  VPPPNKEAKIFPMISPFIFGCVSSCLFGSLMRVLVGSISQ  100
           VPPPNKEAKIFP+++PFIFGCVSSCLFGSLMRVLVGSISQ
Sbjct  61  VPPPNKEAKIFPILNPFIFGCVSSCLFGSLMRVLVGSISQ  100

6) HPSH112_04365 in NC_017741


> NC_014256_P1|13|G13|298736203|YP_003728729.1|Helicobacter_pylori_B8|-|11916..12218|-|HPB8_708|hypothetical 
protein
Length=100

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 83/100 (83%), Positives = 92/100 (92%), Gaps = 0/100 (0%)

Query  1   MFFILPNPFFSTSVIKFLILSMGKLNFFSNISLSPiinirknkkfniienkSLDKPIKRF  60
           MF+IL+NPFFSTS IKFLILS+GKLNFF+N SLSPIINIRKNKKFNIIENKSLDKP+KRF
Sbjct  1   MFLILSNPFFSTSAIKFLILSIGKLNFFPNASLSPIINIRKNKKFNIIENKSLDKPVKRF  60

Query  61  VPPPNKEAKIFPIISPFIFGCTSSRLLGVLMRVLAESTPQ  100
           VPPPNKEAKIFPI++PFIFGC SS L+G LMRVL  S +Q
Sbjct  61  VPPPNKEAKIFPILNPFIFGCVSSCLFGSLMRVLVGSISQ  100