Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
conjugal transfer coupling protein TraG |
NC_010161 (Bartonella tribocorum CIP 105476) |
0.0 |
100 |
|
conjugal transfer protein TraG |
NC_005955 (Bartonella quintana Toulouse) |
0.0 |
87 |
|
conjugal transfer coupling protein TraG |
NC_018533 (Bartonella quintana RM-11) |
0.0 |
86 |
|
conjugal transfer coupling protein TraG |
NC_012846 (Bartonella grahamii as4aup) |
0.0 |
93 |
|
conjugal transfer protein TraG/VirD4 |
NC_020301 (Bartonella vinsonii Winnie) |
0.0 |
88 |
|
conjugal transfer protein TraG |
NC_005956 (Bartonella henselae Houston-1) |
0.0 |
85 |
|
type IV secretion system-coupling protein VirD4 |
NC_014932 (Bartonella clarridgeiae 73) |
0.0 |
80 |
|
conjugal transfer coupling protein TraG |
NC_012847 (Bartonella grahamii as4aup) |
6e-177 |
57 |
|
conjugal transfer coupling protein TraG |
NC_012846 (Bartonella grahamii as4aup) |
8e-174 |
54 |
|
conjugal transfer coupling protein TraG |
NC_004041 (Rhizobium etli CFN 42) |
6e-165 |
51 |
|
Type IV secretion system-coupling protein virD4 |
NC_016815 (Sinorhizobium fredii HH103) |
1e-164 |
51 |
|
conjugal transfer protein TraG |
NC_010996 (Rhizobium etli CIAT 652) |
4e-163 |
51 |
|
type IV secretion system-coupling protein VirD4 |
NC_018000 (Sinorhizobium fredii USDA 257) |
3e-161 |
52 |
|
conjugal transfer coupling protein TraG |
NC_009717 (Xanthobacter autotrophicus Py2) |
2e-160 |
51 |
|
conjugal transfer coupling protein TraG |
NC_003064 (Agrobacterium fabrum C58) |
9e-160 |
51 |
|
conjugal transfer coupling protein TraG |
NC_008242 (Chelativorans sp. BNC1) |
1e-159 |
51 |
|
conjugal transfer coupling protein TraG 2 |
NC_021911 (Rhizobium etli Mim1) |
1e-158 |
51 |
|
Type IV secretion system-coupling protein virD4 |
NC_018299 (Sinorhizobium fredii HH103) |
4e-158 |
53 |
|
type IV secretion system-coupling protein VirD |
NC_018180 (Sinorhizobium fredii USDA 257) |
4e-158 |
53 |
|
Ti-type conjugative transfer system protein TraG |
NC_017324 (Sinorhizobium meliloti BL225C) |
1e-157 |
54 |
|
conjugal transfer coupling protein TraG |
NC_015184 (Agrobacterium sp. H13-3) |
1e-157 |
51 |
|
conjugal transfer protein TraG |
NC_003037 (Sinorhizobium meliloti 1021) |
1e-157 |
53 |
|
TraG conjugal transfer protein |
NC_020527 (Sinorhizobium meliloti 2011) |
1e-157 |
53 |
|
Ti-type conjugative transfer system protein TraG |
NC_019848 (Sinorhizobium meliloti GR4) |
2e-157 |
53 |
|
conjugal transfer coupling protein TraG |
NC_012586 (Sinorhizobium fredii NGR234) |
2e-157 |
50 |
|
Type IV secretion system-coupling protein virD4 |
NC_018683 (Sinorhizobium meliloti Rm41) |
2e-156 |
53 |
|
TraG conjugal transfer protein |
NC_017327 (Sinorhizobium meliloti SM11) |
4e-155 |
52 |
|
conjugal transfer coupling protein TraG |
NC_010997 (Rhizobium etli CIAT 652) |
6e-155 |
49 |
|
conjugal transfer coupling protein TraG |
NC_011990 (Agrobacterium radiobacter K84) |
2e-110 |
45 |
|
conjugal transfer coupling protein TraG |
NC_003065 (Agrobacterium fabrum C58) |
2e-109 |
45 |
|
conjugal transfer coupling protein TraG |
NC_011984 (Agrobacterium vitis S4) |
1e-108 |
44 |
|
conjugal transfer coupling protein TraG |
NC_008383 (Rhizobium leguminosarum 3841) |
1e-108 |
44 |
|
conjugal transfer coupling protein TraG |
NC_011991 (Agrobacterium vitis S4) |
3e-108 |
46 |
|
conjugal transfer coupling protein TraG |
NC_011982 (Agrobacterium vitis S4) |
4e-106 |
47 |
|
conjugal transfer coupling protein TraG |
NC_011981 (Agrobacterium vitis S4) |
8e-106 |
45 |
|
conjugal transfer coupling protein TraG 1 |
NC_021910 (Rhizobium etli Mim1) |
3e-105 |
42 |
|
conjugal transfer coupling protein TraG |
NC_012853 (Rhizobium leguminosarum WSM1325) |
1e-103 |
43 |
|
conjugal transfer protein TraG |
NC_020061 (Rhizobium tropici CIAT 899) |
8e-104 |
42 |
|
conjugal transfer coupling protein TraG |
NC_007961 (Nitrobacter hamburgensis X14) |
1e-103 |
44 |
|
conjugal transfer coupling protein TraG |
NC_007762 (Rhizobium etli CFN 42) |
5e-102 |
46 |
|
conjugal transfer coupling protein TraG |
NC_009621 (Sinorhizobium medicae WSM419) |
2e-101 |
43 |
|
conjugal transfer protein TraG |
NC_020060 (Rhizobium tropici CIAT 899) |
3e-101 |
42 |
|
conjugal transfer coupling protein, VirD4 family |
NC_017536 (Oligotropha carboxidovorans OM4) |
4e-100 |
45 |
|
conjugal transfer coupling protein, VirD4 family |
NC_015689 (Oligotropha carboxidovorans OM5) |
4e-100 |
45 |
|
conjugal transfer protein TraG |
NC_000914 (Sinorhizobium fredii NGR234) |
1e-99 |
42 |
|
conjugal transfer coupling protein TraG |
NC_008242 (Chelativorans sp. BNC1) |
2e-98 |
41 |
|
putative conjugal transfer protein traG |
NC_018682 (Sinorhizobium meliloti Rm41) |
2e-97 |
42 |
|
conjugal transfer coupling protein TraG |
NC_011758 (Methylobacterium chloromethanicum CM4) |
4e-82 |
41 |
|
conjugal transfer coupling protein TraG |
NC_012987 (Methylobacterium extorquens DM4) |
6e-80 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_010161_P1' AND ph.id_pai_orf='13' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc