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PAthogenisity Island DataBase (PAI DB)

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Homologs of SH2308 gene of NC_007168_R3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SH2308
( YP_254223.1 )

hypothetical protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

8e-81

100

2) SABB_05403
( YP_008167504.1 )

TetR family transcriptional regulator protein

NC_021670
(Staphylococcus aureus Bmb9393)

2e-73

3) SSP0227
( YP_300317.1 )

transcriptional regulator

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

4e-40

4) MCCL_1472
( YP_002560875.1 )

hypothetical protein

NC_011999
(Macrococcus caseolyticus JCSC5402)

5e-31

• Sequence Alignments

1) SH2308 in NC_007168


> NC_007168_R3|13|G13|70727307|YP_254223.1|Staphylococcus_haemolyticus_JCSC1435|-|8508..9089|-|SH2308|hypothetical 
protein
Length=193

 Score =  293 bits (1096),  Expect = 8e-81, Method: Compositional matrix adjust.
 Identities = 193/193 (100%), Positives = 193/193 (100%), Gaps = 0/193 (0%)

Query  1    MPKIINHKEKKKQIIQYAFDSIVEKGVKGSTVRQIAKLADMTPGQIRYYFPNHSELLNAV  60
            MPKIINHKEKKKQIIQYAFDSIVEKGVKGSTVRQIAKLADMTPGQIRYYFPNHSELLNAV
Sbjct  1    MPKIINHKEKKKQIIQYAFDSIVEKGVKGSTVRQIAKLADMTPGQIRYYFPNHSELLNAV  60

Query  61   MSTVELKVRRRIEAIFKSENLTTIDKAKASLLTVLPLDKERLADMEVWMAFRNDIHEYGQ  120
            MSTVELKVRRRIEAIFKSENLTTIDKAKASLLTVLPLDKERLADMEVWMAFRNDIHEYGQ
Sbjct  61   MSTVELKVRRRIEAIFKSENLTTIDKAKASLLTVLPLDKERLADMEVWMAFRNDIHEYGQ  120

Query  121  STLDDGLDQLCNSILTLLKNDHLLKNNVNIHLNSMKLHALIDGLALHKLLNPNGVSNddi  180
            STLDDGLDQLCNSILTLLKNDHLLKNNVNIHLNSMKLHALIDGLALHKLLNPNGVSNDDI
Sbjct  121  STLDDGLDQLCNSILTLLKNDHLLKNNVNIHLNSMKLHALIDGLALHKLLNPNGVSNDDI  180

Query  181  qiivdeeivRLTQ  193
            QIIVDEEIVRLTQ
Sbjct  181  QIIVDEEIVRLTQ  193

2) SABB_05403 in NC_021670


> NC_007168_R3|13|G13|70727307|YP_254223.1|Staphylococcus_haemolyticus_JCSC1435|-|8508..9089|-|SH2308|hypothetical 
protein
Length=193

 Score =  268 bits (1002),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 178/180 (99%), Positives = 180/180 (100%), Gaps = 0/180 (0%)

Query  1    MIQYAFDSIVEKGVKGSTVRQIAKLADMTPGQIRYYFPNHSELLNAVMSTVELKVRRRIE  60
            +IQYAFDSIVEKGVKGSTVRQIAKLADMTPGQIRYYFPNHSELLNAVMSTVELKVRRRIE
Sbjct  14   IIQYAFDSIVEKGVKGSTVRQIAKLADMTPGQIRYYFPNHSELLNAVMSTVELKVRRRIE  73

Query  61   AIFKSENLTTIDKAKASLLTVLPLDKERLADMEVWMAFRNDIHEYGQSTLDDGLDQLCNS  120
            AIFKSENLTTIDKAKASLLTVLPLDKERLADMEVWMAFRNDIHEYGQSTLDDGLDQLCNS
Sbjct  74   AIFKSENLTTIDKAKASLLTVLPLDKERLADMEVWMAFRNDIHEYGQSTLDDGLDQLCNS  133

Query  121  ILTLLKNDHLLKNNVNIHLNSMKLHALIDGLALHKLLNPNGVSNddiqiivdeeivRLTK  180
            ILTLLKNDHLLKNNVNIHLNSMKLHALIDGLALHKLLNPNGVSNDDIQIIVDEEIVRLT+
Sbjct  134  ILTLLKNDHLLKNNVNIHLNSMKLHALIDGLALHKLLNPNGVSNDDIQIIVDEEIVRLTQ  193

3) SSP0227 in NC_007350


> NC_007168_R3|13|G13|70727307|YP_254223.1|Staphylococcus_haemolyticus_JCSC1435|-|8508..9089|-|SH2308|hypothetical 
protein
Length=193

 Score =  157 bits (581),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 94/188 (50%), Positives = 146/188 (78%), Gaps = 0/188 (0%)

Query  1    MPKVVDHEKKKQQIIQYAWQSIVSNGAKGATVRNIAKLARMTPGQIRYYYPNHHDLLKAV  60
            MPK+++H  KK+QIIQYA +SIV +G KG+TVR+IAKLA MTPGQIRYY+PNH +LL+AV
Sbjct  1    MPKIINHKEKKKQIIQYAFDSIVEKGVKGSTVRQIAKLADMTPGQIRYYFPNHSELLNAV  60

Query  61   SVEVDSKVRGRIKAVYNDGSLSPLDKVIQAMLKAMPLDEERYADMEVWLAFQYELHEVGK  120
               V+ KVR RI A+++  +L+ +DK   ++L  +PLD ER ADMEVW+AF+ ++HE G+
Sbjct  61   MSTVELKVRRRIEAIFKSENLTTIDKAKASLLTVLPLDKERLADMEVWMAFRNDIHEYGQ  120

Query  121  DSMGNEIFTLIKASMSFLEEHDLLDTSLNQYVAIMKMhalldglalhkllNPEQMINEDI  180
             ++++ +  L ++ +++L +++LL  ++N  +  MK+HAL+DGLALHKLLNP+ + N+DI
Sbjct  121  STLDDGLDQLCNSILTLLKNDHLLKNNVNIHLNSMKLHALIDGLALHKLLNPNGVSNDDI  180

Query  181  EHLIESEV  188
            + +++ E+
Sbjct  181  QIIVDEEI  188

4) MCCL_1472 in NC_011999


> NC_007168_R3|13|G13|70727307|YP_254223.1|Staphylococcus_haemolyticus_JCSC1435|-|8508..9089|-|SH2308|hypothetical 
protein
Length=193

 Score =  127 bits (466),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 127/188 (68%), Gaps = 0/188 (0%)

Query  1    MPKIVNHEEKKHLILEIAYHNIQELGKQGTSVRSIANAAKMTPGQIRYYFPNQSALLSEI  60
            MPKI+NH EKK  I++ A+++I E G +G++VR IA+ A MTPGQIRYYFPN+S LL+ +
Sbjct  1    MPKIINHKEKKKQIIQYAFDSIVEKGVKGSTVRQIAKLADMTPGQIRYYFPNHSELLNAV  60

Query  61   LNMLTESIESNIKSIFLDRNIPLEKRIVDAILLTMPLDKKRTADMIVWLAVQEENSAINE  120
            ++ +   +   I +IF   N+    +   ++L  +PLDK R ADM VW+A +++     +
Sbjct  61   MSTVELKVRRRIEAIFKSENLTTIDKAKASLLTVLPLDKERLADMEVWMAFRNDIHEYGQ  120

Query  121  NTMSDEIYILLQTSFELLQQANKINESIDKEKAITKLHALIDGLALHKLYQPKQLSNTLV  180
            +T+ D +  L ++ + LL++ + ++++++ +    KLHALIDGLALHKL +P+ +SN  +
Sbjct  121  STLDDGLDQLCNSILTLLKNDHLLKNNVNIHLNSMKLHALIDGLALHKLLNPNGVSNDDI  180

Query  181  EQIITEEI  188
            + I+ EEI
Sbjct  181  QIIVDEEI  188