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Homologs of S4059 gene of NC_004741_P2

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EcolC_0746
( - )

NC_010468
(Escherichia coli ATCC 8739)

e-284

2) EcE24377A_4872
( - )

NC_009801
(Escherichia coli E24377A)

e-284

3) SFxv_3388
( - )

NC_017328
(Shigella flexneri 2002017)

e-283

4) EcDH1_3706
( - )

NC_017625
(Escherichia coli DH1)

e-283

98.8

5) insB1
( - )

NC_000913
(Escherichia coli K12)

e-283

98.8

6) insB-26
( - )

NC_012892
(Escherichia coli BL21(DE3))

e-282

98.6

7) insAB-26
( - )

NC_012892
(Escherichia coli BL21(DE3))

e-282

98.6

8) ECBD_3744
( - )

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

e-282

98.6

9) join
( - )

NC_017626
(Escherichia coli 042)

e-282

99.2

10) ECO111_1633
( - )

NC_013364
(Escherichia coli 11128)

e-279

98.6

11) SFxv_3307
( - )

NC_017328
(Shigella flexneri 2002017)

e-278

99.4

12) insB
( - )

NC_004337
(Shigella flexneri 301)

e-277

98.8

13) EcE24377A_4941
( - )

NC_009801
(Escherichia coli E24377A)

e-272

97.2

14) EcE24377A_E0048
( - )

NC_009790
(Escherichia coli E24377A)

e-269

15) unnamed
( - )

NC_007613
(Shigella boydii Sb227)

e-261

99.1

16) unnamed
( - )

NC_007613
(Shigella boydii Sb227)

e-239

99.1

17) SSON_1028
( - )

NC_007384
(Shigella sonnei Ss046)

e-231

91.6

18) SbBS512_E2587
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-231

91.4

19) SbBS512_E1101
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

20) SbBS512_E0798
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

21) SbBS512_E4013
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

22) SbBS512_E0702
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

23) SbBS512_E3533
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

24) SbBS512_E1411
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

25) SbBS512_E0868
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

26) SbBS512_E4354
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

27) SbBS512_E3257
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

28) SbBS512_E4520
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

29) SbBS512_E0787
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

30) SbBS512_E0248
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

31) SbBS512_E2784
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-230

91.2

32) SbBS512_E4730
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-228

33) SbBS512_E0876
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-228

34) SbBS512_E3803
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-229

35) unnamed
( - )

NC_007606
(Shigella dysenteriae Sd197)

e-227

91.4

36) Entcl_1717
( - )

NC_014618
(Enterobacter cloacae SCF1)

e-223

87.1

37) SbBS512_E2787
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-222

99.2

38) SbBS512_E2582
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-222

99.2

39) SbBS512_E3879
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-222

99.2

40) join
( - )

NC_017626
(Escherichia coli 042)

e-219

98.5

41) insB-25
( - )

NC_012971
(Escherichia coli BL21(DE3))

e-219

98.5

42) insB-25
( - )

NC_012967
(Escherichia coli REL606)

e-219

98.5

43) unnamed
( - )

NC_007613
(Shigella boydii Sb227)

e-217

98.2

44) SbBS512_E3493
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-214

99.2

45) ETEC_0212
( - )

NC_017633
(Escherichia coli ETEC H10407)

e-200

96.6

46) SbBS512_E2111
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-198

95.5

47) unnamed
( - )

NC_007606
(Shigella dysenteriae Sd197)

e-194

90.8

48) ECBD_0297
( - )

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

e-189

90.2

49) SbBS512_E4788
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-187

99.3

50) insB
( - )

NC_011747
(Escherichia coli S88)

e-180

91.1

51) SbBS512_E1547
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-171

52) SbBS512_A0093
( - )

NC_010660
(Shigella boydii CDC 3083-94)

e-168

90.1

53) SbBS512_A0278
( - )

NC_010660
(Shigella boydii CDC 3083-94)

e-168

90.1

54) SbBS512_A0014
( - )

NC_010660
(Shigella boydii CDC 3083-94)

e-168

90.1

55) SbBS512_A0045
( - )

NC_010660
(Shigella boydii CDC 3083-94)

e-168

90.1

56) SFxv_3229
( - )

NC_017328
(Shigella flexneri 2002017)

e-145

99.6

57) SbBS512_E4896
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-138

99.1

58) SFxv_0905
( - )

NC_017328
(Shigella flexneri 2002017)

e-137

99.6

59) SFxv_4704
( - )

NC_017328
(Shigella flexneri 2002017)

e-136

99.4

60) insB
( - )

NC_011745
(Escherichia coli ED1a)

e-133

91.3

61) SbBS512_E0766
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-115

91.7

• Sequence Alignments

1) EcolC_0746 in NC_010468


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 973 bits (2510), Expect = e-284
 Identities = 499/504 (99%)
 Strand = Plus / Plus

Query: 195 atgtcgcaccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 254
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 255 aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 315 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttt 374
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 375 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 435 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatagatgacg 494
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 495 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 554
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 555 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggga 614
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420

Query: 615 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 674
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480

Query: 675 ctgaacataaaacactatcagtaa 698
           ||||||||||||||||||||||||
Sbjct: 481 ctgaacataaaacactatcagtaa 504

2) EcE24377A_4872 in NC_009801


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 973 bits (2510), Expect = e-284
 Identities = 499/504 (99%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggtcgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 121 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttt 180
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatagatgacg 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggga 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420

Query: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480

Query: 481 ctgaacataaaacactatcagtaa 504
           ||||||||||||||||||||||||
Sbjct: 481 ctgaacataaaacactatcagtaa 504

3) SFxv_3388 in NC_017328


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 971 bits (2505), Expect = e-283
 Identities = 499/504 (99%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 121 gctgaaatggacgaacattgaggctacgtcggtgctaaatcacgtcagcgctggctgttt 180
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 181 tacgagtatgacaggatacggaggacggttgtggcgcacgtcttcggggaacgcactctg 240
           |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 241 gccacactggagcgtgttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420

Query: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480

Query: 481 ctgaacataaaacactatcagtaa 504
           ||||||||||||||||||||||||
Sbjct: 481 ctgaacataaaacactatcagtaa 504

4) EcDH1_3706 in NC_017625


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 970 bits (2503), Expect = e-283
 Identities = 498/504 (99%)
 Strand = Plus / Plus

Query: 195 atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 255 aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 315 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttt 374
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 375 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 435 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatagatgacg 494
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 495 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 554
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 555 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggga 614
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420

Query: 615 cggaagttactgtcgttctcaaaatcggtggagttgcatgacaaggtcatcgggcattat 674
           ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480

Query: 675 ctgaacataaaacactatcagtaa 698
           ||||||||||||||||||||||||
Sbjct: 481 ctgaacataaaacactatcagtaa 504

5) insB1 in NC_000913


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 970 bits (2503), Expect = e-283
 Identities = 498/504 (99%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 121 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttt 180
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatagatgacg 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggga 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420

Query: 421 cggaagttactgtcgttctcaaaatcggtggagttgcatgacaaggtcatcgggcattat 480
           ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480

Query: 481 ctgaacataaaacactatcagtaa 504
           ||||||||||||||||||||||||
Sbjct: 481 ctgaacataaaacactatcagtaa 504

6) insAB-26 in NC_012892


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 967 bits (2497), Expect = e-282
 Identities = 497/504 (99%)
 Strand = Plus / Plus

Query: 195 atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 255 aaactcaggccgtagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 314
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 315 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttt 374
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 375 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 435 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatagatgacg 494
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 495 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 554
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 555 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggga 614
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420

Query: 615 cggaagttactgtcgttctcaaaatcggtggagttgcatgacaaggtcatcgggcattat 674
           ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480

Query: 675 ctgaacataaaacactatcagtaa 698
           ||||||||||||||||||||||||
Sbjct: 481 ctgaacataaaacactatcagtaa 504

7) insB-26 in NC_012892


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 967 bits (2497), Expect = e-282
 Identities = 497/504 (99%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggccgtagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 121 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttt 180
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatagatgacg 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggga 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420

Query: 421 cggaagttactgtcgttctcaaaatcggtggagttgcatgacaaggtcatcgggcattat 480
           ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480

Query: 481 ctgaacataaaacactatcagtaa 504
           ||||||||||||||||||||||||
Sbjct: 481 ctgaacataaaacactatcagtaa 504

8) ECBD_3744 in NC_012947


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 967 bits (2497), Expect = e-282
 Identities = 497/504 (99%)
 Strand = Plus / Plus

Query: 195 atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 255 aaactcaggccgtagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 314
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 315 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttt 374
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 375 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 435 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatagatgacg 494
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 495 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 554
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 555 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggga 614
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420

Query: 615 cggaagttactgtcgttctcaaaatcggtggagttgcatgacaaggtcatcgggcattat 674
           ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480

Query: 675 ctgaacataaaacactatcagtaa 698
           ||||||||||||||||||||||||
Sbjct: 481 ctgaacataaaacactatcagtaa 504

9) join in NC_017626


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 966 bits (2493), Expect = e-282
 Identities = 499/504 (99%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattatctgc 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggctgttt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 181 tacgcgtatgacaggatacggaggacggttgtggc-cacgtcttcggtgaacgcactctg 239
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 240 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatagatgacg 299
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 300 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 360 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggga 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420

Query: 420 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480

Query: 480 ctgaacataaaacactatcagtaa 503
           ||||||||||||||||||||||||
Sbjct: 481 ctgaacataaaacactatcagtaa 504

10) ECO111_1633 in NC_013364


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 957 bits (2469), Expect = e-279
 Identities = 497/506 (98%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 121 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttt 180
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcctcggtgaacgcactctg 240
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgtgcacgttatcagcaagc 360
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctg--cacgttatcagcaagc 358

Query: 361 gttacactcagcgcattgagcgacataatctgaatctgagacaacacctggcaaggccgg 420
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 359 gttacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctgg 418

Query: 421 gacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggacatcgggcatt 480
            ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 419 tacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcatt 478

Query: 481 atctgaacataaaacactatcagtaa 506
           ||||||||||||||||||||||||||
Sbjct: 479 atctgaacataaaacactatcagtaa 504

11) SFxv_3307 in NC_017328


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 953 bits (2458), Expect = e-278
 Identities = 497/502 (99%)
 Strand = Plus / Plus

Query: 195 atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 255 aa-ctcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 313
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 314 gctgaaatggacgaacattggggctacgtcgggtgctaaatcacgtcagcgctggctgtt 373
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcgg-tgctaaatcacgtcagcgctggttgtt 179

Query: 374 ttacgcgtatgacaggatacggaggacggttgtgccgcacgtcttcggtgaacgcactct 433
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 180 ttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactct 239

Query: 434 ggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgac 493
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgac 299

Query: 494 ggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcg 553
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcg 359

Query: 554 ttacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggg 613
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 360 ttacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggt 419

Query: 614 acggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcatta 673
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 acggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcatta 479

Query: 674 tctgaacataaaacactatcag 695
           ||||||||||||||||||||||
Sbjct: 480 tctgaacataaaacactatcag 501

12) insB in NC_004337


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 950 bits (2452), Expect = e-277
 Identities = 497/505 (98%)
 Strand = Plus / Plus

Query: 195 atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 255 aa-ctcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 313
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 314 gctgaaatggacgaacattggggctacgtcgggtgctaaatcatgtcagcgctggctgtt 373
           |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcgg-tgctaaatcacgtcagcgctggttgtt 179

Query: 374 ttacgcgtatgacaggatacggaggacggttgtgccgcacgtcttcggtgaacgcactct 433
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 180 ttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactct 239

Query: 434 ggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgac 493
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgac 299

Query: 494 ggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcg 553
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcg 359

Query: 554 ttacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggg 613
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 360 ttacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggt 419

Query: 614 acggaagttactgtcgttctcaaaatcggtggagttgcatgacaaggtcatcgggcatta 673
           |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 420 acggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcatta 479

Query: 674 tctgaacataaaacactatcagtaa 698
           |||||||||||||||||||||||||
Sbjct: 480 tctgaacataaaacactatcagtaa 504

13) EcE24377A_4941 in NC_009801


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 932 bits (2405), Expect = e-272
 Identities = 489/504 (97%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattatctgc 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 121 gcggaaatggacgaacagtggggctatgtcggggctaaatcgcgccagcgctggctgttt 180
           || |||||||||||||| |||||||| ||||| |||||||| || ||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 181 tacgcgtatgacaggcttcggaagacggttgtggc-cacgtcttcggtgaacgcactctg 239
           ||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 240 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtagtatagatgacg 299
           ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 300 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 360 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggga 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggta 420

Query: 420 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattat 480

Query: 480 ctgaacataaaacactatcagtaa 503
           ||||||||||||||||||||||||
Sbjct: 481 ctgaacataaaacactatcagtaa 504

14) EcE24377A_E0048 in NC_009790


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 925 bits (2387), Expect = e-269
 Identities = 478/488 (98%)
 Strand = Plus / Plus

Query: 17  cgcattatgggcgttggcctcaacacgattttacgtcacttaaaaaactcaggccgcagt 76
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 17  cgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccgcagt 76

Query: 77  cggtaacctcgcgcatacagccgggcagtgatgtgattgtctgcgctgaaatggacgaat 136
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| 
Sbjct: 77  cggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggacgaac 136

Query: 137 agtggggctacgtcggtgctaaatcacgtcagcgctggctgttttacgcgtatgacagga 196
           | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 137 attggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgacagga 196

Query: 197 tacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggagcgtc 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggagcgtc 256

Query: 257 ttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccgctgt 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccgctgt 316

Query: 317 atgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgttacactcagcgcattg 376
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 317 atgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgcattg 376

Query: 377 agcgacataacctgaatctgagacaacatctggcaaggctgggacggaagtcactgtcgt 436
           |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 377 agcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtcactgtcgt 436

Query: 437 tctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacact 496
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 437 tctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaacact 496

Query: 497 atcagtaa 504
           ||||||||
Sbjct: 497 atcagtaa 504

15) unnamed in NC_007613


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 898 bits (2318), Expect = e-261
 Identities = 462/466 (99%)
 Strand = Plus / Plus

Query: 1   acacggttttacgtcacttaaaaaactcaggccgcagtcggtaacctcgcgcatacaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39  acacggttttacgtcacttaaaaaactcaggccgcagtcggtaacctcgcgcatacaacc 98

Query: 61  gggcagtgatgtgattgtctgcgctgaaatggacgaacagtggggctacgtcggtgctaa 120
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 99  gggcagtgatgtgattgtctgcgctgaaatggacgaacattggggctacgtcggtgctaa 158

Query: 121 atcacgtcagcgctggctgttttacgcgtatgacaggatacggaggacggttgtggcgca 180
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atcacgtcagcgctggttgttttacgcgtatgacaggatacggaggacggttgtggcgca 218

Query: 181 cgtcttcggtgaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cgtcttcggtgaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctt 278

Query: 241 tgaggtcgtggtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgaggtcgtggtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaa 338

Query: 301 gctgcacgttatcagcaagcgttacactcagcgcattgagcgacataatctgaatctgag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gctgcacgttatcagcaagcgttacactcagcgcattgagcgacataatctgaatctgag 398

Query: 361 acaacatctggcaagcctgggacggaagtcactgtcgttctcaaaatcggtggagctgca 420
           ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 399 acaacatctggcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctgca 458

Query: 421 tgacaaggtcatcgggcattatctgaacataaaacactatcagtaa 466
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tgacaaggtcatcgggcattatctgaacataaaacactatcagtaa 504

16) unnamed in NC_007613


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 822 bits (2122), Expect = e-239
 Identities = 422/426 (99%)
 Strand = Plus / Plus

Query: 1   gtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggacgaacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 79  gtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggacgaacat 138

Query: 61  tggggctacgtcggtgctaaatcacgtcagcgctggctgttttacgcgtatgacaggata 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 139 tggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgacaggata 198

Query: 121 cggaggacggttgtggcgcacgtcttcggtgaacgcactctgaccacactggagcgtctt 180
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 199 cggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggagcgtctt 258

Query: 181 ctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccgctgtat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccgctgtat 318

Query: 241 gaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgcattgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgcattgag 378

Query: 301 cgacataatctgaatctgagacaacatctggcaaggctgggacggaagtcactgtcgttc 360
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 379 cgacataatctgaatctgagacaacatctggcaaggctggtacggaagtcactgtcgttc 438

Query: 361 tcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaacactat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaacactat 498

Query: 421 cagtaa 426
           ||||||
Sbjct: 499 cagtaa 504

17) SSON_1028 in NC_007384


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 799 bits (2061), Expect = e-231
 Identities = 448/495 (91%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttggcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggctatgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| |||||||| ||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 agtctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||  | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcctgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| |||||||||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           |||||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

18) SbBS512_E2587 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 798 bits (2058), Expect = e-231
 Identities = 447/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggctacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| |||||||||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

19) SbBS512_E0248 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

20) SbBS512_E0702 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

21) SbBS512_E0787 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

22) SbBS512_E0798 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

23) SbBS512_E0868 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

24) SbBS512_E1101 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

25) SbBS512_E1411 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

26) SbBS512_E2784 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

27) SbBS512_E3257 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

28) SbBS512_E3533 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

29) SbBS512_E4013 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

30) SbBS512_E4354 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

31) SbBS512_E4520 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 793 bits (2047), Expect = e-230
 Identities = 446/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

32) SbBS512_E0876 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 789 bits (2036), Expect = e-228
 Identities = 445/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgcagggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || | || |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

33) SbBS512_E4730 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 789 bits (2036), Expect = e-228
 Identities = 445/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaaactcaggccg 72
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgcagggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || | || |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

34) SbBS512_E3803 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 789 bits (2036), Expect = e-229
 Identities = 445/495 (90%)
 Strand = Plus / Plus

Query: 13  tgcacgcattatgggcgttagcctcaacacgattttacgtcacttaaaaacctcaggccg 72
           ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 73  cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 132
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 133 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 192
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 193 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 252
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 253 cgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggatggctgg 309
           |||||| ||||| |||||||  |||||||   |||||   ||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctgg 309

Query: 310 ccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 369
           || ||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 370 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 429
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 489
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 490 aaacactatcaataa 504
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

35) unnamed in NC_007606


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 783 bits (2020), Expect = e-227
 Identities = 445/495 (90%)
 Strand = Plus / Plus

Query: 159 tgcacgcattatgggcgttagcctcaacacgatttcacgtcacttaaaaaactcaggccg 218
           ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 13  tgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccg 72

Query: 219 cagtcggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggac 278
           ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 73  cagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggac 132

Query: 279 gaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgac 338
           ||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 133 gaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgac 192

Query: 339 aggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctgggg 398
           ||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |
Sbjct: 193 aggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggag 252

Query: 399 cgtcttatgagcctgctgtcaccctttga---cgtggtgatatggat--cggatggctgg 453
           |||||| |||||||||||||  |||||||   ||||||   ||||||  |||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtggt---atggatgacggatggctgg 309

Query: 454 ccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcag 513
           |||||||||||||| ||||||||||||||||||||||| ||||||||||| || || |||
Sbjct: 310 ccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcag 369

Query: 514 cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcg 573
           || |||||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| 
Sbjct: 370 cgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtca 429

Query: 574 ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacata 633
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ctgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacata 489

Query: 634 aaacactatcaataa 648
           ||||||||||| |||
Sbjct: 490 aaacactatcagtaa 504

36) Entcl_1717 in NC_014618


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 770 bits (1988), Expect = e-223
 Identities = 439/505 (87%)
 Strand = Plus / Plus

Query: 195 atgtcgagccagtgctcgcgttatgggtgttggcttcaacacgatttttcgccatttaaa 254
           |||||| |||||||| ||| ||||||| |||||| |||||||| |||| || || |||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 255 aaactcaggccgcagtcagtaacttcccggatacagccgggcagtgacgtcattgtctgt 314
           ||||||||||||||||| ||||| || || ||||| ||||||||||| || |||||||| 
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 315 gcggaagtggacgaacagtgggggctacgtcggcgctaaatcacgcctgcgctggctgtt 374
           || ||| |||||||||| | ||||||||||||| ||||||||||| | ||||||| ||||
Sbjct: 121 gctgaaatggacgaacatt-ggggctacgtcggtgctaaatcacgtcagcgctggttgtt 179

Query: 375 ttacgcgtatgataggatacgcagaacggttgtggcccacgtctttggtgaacgtacgat 434
           |||||||||||| |||||||| || ||||||||||| |||||||| |||||||| ||  |
Sbjct: 180 ttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactct 239

Query: 435 ggccacactggagcatcttctgagcctgttgtcagcgtttgaagttgtggtatggatgac 494
           |||||||||||||| ||||||||||||| |||| || ||||| || ||||||||||||||
Sbjct: 240 ggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgac 299

Query: 495 gggcggctggccgctgtatgaatcccacctgaagggaaagctgcacgtcatcagcaagcg 554
           ||  |||||||||||||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct: 300 ggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcg 359

Query: 555 gtatacgcagcgtattgagcggcataacctggttctgaggcagcatctggccaggctgag 614
            || || ||||| |||||||| ||||| |||  |||||| || |||||||| ||||||  
Sbjct: 360 ttacactcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggt 419

Query: 615 caggaagtcgttgtcgttctcaaagtcgatggaactgcatgacaaagtcatcggtcatta 674
             |||||||  ||||||||||||| ||| |||| ||||||||||| |||||||| |||||
Sbjct: 420 acggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcatta 479

Query: 675 tctgaacataaaacactatcagtaa 699
           |||||||||||||||||||||||||
Sbjct: 480 tctgaacataaaacactatcagtaa 504

37) SbBS512_E2582 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 766 bits (1976), Expect = e-222
 Identities = 393/396 (99%)
 Strand = Plus / Plus

Query: 1   gtgattgtctgcgctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcag 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 109 gtgattgtctgcgctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcag 168

Query: 61  cgctggctgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cgctggttgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 228

Query: 121 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 288

Query: 181 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 348

Query: 241 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 408

Query: 301 gcaaggctgggacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 468

Query: 361 atcgggcattatctgaacataaaacactatcagtaa 396
           ||||||||||||||||||||||||||||||||||||
Sbjct: 469 atcgggcattatctgaacataaaacactatcagtaa 504

38) SbBS512_E2787 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 766 bits (1976), Expect = e-222
 Identities = 393/396 (99%)
 Strand = Plus / Plus

Query: 1   gtgattgtctgcgctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcag 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 109 gtgattgtctgcgctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcag 168

Query: 61  cgctggctgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cgctggttgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 228

Query: 121 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 288

Query: 181 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 348

Query: 241 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 408

Query: 301 gcaaggctgggacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 468

Query: 361 atcgggcattatctgaacataaaacactatcagtaa 396
           ||||||||||||||||||||||||||||||||||||
Sbjct: 469 atcgggcattatctgaacataaaacactatcagtaa 504

39) SbBS512_E3879 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 766 bits (1976), Expect = e-222
 Identities = 393/396 (99%)
 Strand = Plus / Plus

Query: 1   gtgattgtctgcgctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcag 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 109 gtgattgtctgcgctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcag 168

Query: 61  cgctggctgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cgctggttgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 228

Query: 121 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 288

Query: 181 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 348

Query: 241 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 408

Query: 301 gcaaggctgggacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 468

Query: 361 atcgggcattatctgaacataaaacactatcagtaa 396
           ||||||||||||||||||||||||||||||||||||
Sbjct: 469 atcgggcattatctgaacataaaacactatcagtaa 504

40) join in NC_017626


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 758 bits (1955), Expect = e-219
 Identities = 390/396 (98%)
 Strand = Plus / Plus

Query: 1   gtgattgtctgcgctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcag 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 109 gtgattgtctgcgctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcag 168

Query: 61  cgctggctgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cgctggttgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 228

Query: 121 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 288

Query: 181 gtatagatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 348

Query: 241 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 408

Query: 301 gcaaggctgggacggaagttactgtcgttctcaaaatcggtggagttgcatgacaaggtc 360
           |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 409 gcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 468

Query: 361 atcgggcattatctgaacataaaacactatcagtaa 396
           ||||||||||||||||||||||||||||||||||||
Sbjct: 469 atcgggcattatctgaacataaaacactatcagtaa 504

41) insB-25 in NC_012971


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 758 bits (1955), Expect = e-219
 Identities = 390/396 (98%)
 Strand = Plus / Plus

Query: 1   gtgattgtctgcgctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcag 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 109 gtgattgtctgcgctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcag 168

Query: 61  cgctggctgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cgctggttgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 228

Query: 121 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 288

Query: 181 gtatagatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 348

Query: 241 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 408

Query: 301 gcaaggctgggacggaagttactgtcgttctcaaaatcggtggagttgcatgacaaggtc 360
           |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 409 gcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 468

Query: 361 atcgggcattatctgaacataaaacactatcagtaa 396
           ||||||||||||||||||||||||||||||||||||
Sbjct: 469 atcgggcattatctgaacataaaacactatcagtaa 504

42) insB-25 in NC_012967


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 758 bits (1955), Expect = e-219
 Identities = 390/396 (98%)
 Strand = Plus / Plus

Query: 1   gtgattgtctgcgctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcag 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 109 gtgattgtctgcgctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcag 168

Query: 61  cgctggctgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cgctggttgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 228

Query: 121 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 288

Query: 181 gtatagatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 348

Query: 241 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 408

Query: 301 gcaaggctgggacggaagttactgtcgttctcaaaatcggtggagttgcatgacaaggtc 360
           |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 409 gcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 468

Query: 361 atcgggcattatctgaacataaaacactatcagtaa 396
           ||||||||||||||||||||||||||||||||||||
Sbjct: 469 atcgggcattatctgaacataaaacactatcagtaa 504

43) unnamed in NC_007613


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 752 bits (1939), Expect = e-217
 Identities = 388/395 (98%)
 Strand = Plus / Plus

Query: 1   tgattgtctgcgtgaaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagc 60
           ||||||||||||   ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 110 tgattgtctgcgctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagc 169

Query: 61  gctggctgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtg 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gctggttgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtg 229

Query: 121 aacgcactctgaccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtgg 180
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtgg 289

Query: 181 tatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtta 349

Query: 241 tcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctgg 409

Query: 301 caaggctgggacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtca 360
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 caaggctggtacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtca 469

Query: 361 tcgggcattatctgaacataaaacactatcagtaa 395
           |||||||||||||||||||||||||||||||||||
Sbjct: 470 tcgggcattatctgaacataaaacactatcagtaa 504

44) SbBS512_E3493 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 740 bits (1910), Expect = e-214
 Identities = 378/381 (99%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 121 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttt 180
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacg 300

Query: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgt 360

Query: 361 tacactcagcgcattgagtga 381
           |||||||||||||||||| ||
Sbjct: 361 tacactcagcgcattgagcga 381

45) ETEC_0212 in NC_017633


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 696 bits (1795), Expect = e-200
 Identities = 365/378 (97%)
 Strand = Plus / Plus

Query: 1   atggacgaacagaggggttacgtcggcgctaaatcacgctagcgctggttgttttacgcg 60
           |||||||||||  |||| |||||||| |||||||||||  ||||||||||||||||||||
Sbjct: 127 atggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcg 186

Query: 61  tatgacaggattcggaggacggttgtggcgcacgtattcggtgaacgcactctggccaca 120
           ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 187 tatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccaca 246

Query: 121 ctggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ctggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggc 306

Query: 181 tggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgttacact 240
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 307 tggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacact 366

Query: 241 cagcgcattgagcgacataacctgaatctgagacaacatctggcaaggctgggacggaag 300
           |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 367 cagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaag 426

Query: 301 tcactgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaac 360
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 427 tcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaac 486

Query: 361 ataaaacactatcagtaa 378
           ||||||||||||||||||
Sbjct: 487 ataaaacactatcagtaa 504

46) SbBS512_E2111 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 686 bits (1770), Expect = e-198
 Identities = 361/378 (96%)
 Strand = Plus / Plus

Query: 1   atggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttttacgcg 60
           ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 127 atggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcg 186

Query: 61  tatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccaca 246

Query: 121 ctggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ctggagcgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggc 306

Query: 181 tggccgctgtatgaatcacgcctgaagggaaagctgcacgtaatcagcaagcgatatacg 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || 
Sbjct: 307 tggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacact 366

Query: 241 cagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaag 300
           ||||| |||||||| ||||| ||||||||||| || || |||||| |||||| |||||||
Sbjct: 367 cagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaag 426

Query: 301 tcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaac 360
           || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 427 tcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaac 486

Query: 361 ataaaacactatcaataa 378
           |||||||||||||| |||
Sbjct: 487 ataaaacactatcagtaa 504

47) unnamed in NC_007606


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 675 bits (1741), Expect = e-194
 Identities = 384/429 (90%)
 Strand = Plus / Plus

Query: 1   gtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggacgaacag 60
           ||||||||||||||||| ||||||||||| || || |||||||| |||||||||||||| 
Sbjct: 79  gtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggacgaacat 138

Query: 61  tggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgacaggctc 120
           ||||| |||||||| |||||||| || ||||||||| |||||||||||||||||||| | 
Sbjct: 139 tggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgacaggata 198

Query: 121 cggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacgctggggcgtctt 180
           |||| ||||||||| |||||||| ||||||||||||||| |||| || |||| |||||||
Sbjct: 199 cggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggagcgtctt 258

Query: 181 atgagcctgctgtcaccctttga---cgtggtgatatggatgacggatggctggccgctg 237
            |||||||||||||  |||||||   |||||   ||||||||||||||||||||||||||
Sbjct: 259 ctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctggccgctg 315

Query: 238 tatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaatt 297
           |||||||| ||||||||||||||||||||||| ||||||||||| || || ||||| |||
Sbjct: 316 tatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgcatt 375

Query: 298 gagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcg 357
           ||||| ||||| ||||||||||| || || |||||| |||||| ||||||||| ||||||
Sbjct: 376 gagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtcactgtcg 435

Query: 358 ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacac 417
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 436 ttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaacac 495

Query: 418 tatcaataa 426
           ||||| |||
Sbjct: 496 tatcagtaa 504

48) ECBD_0297 in NC_012947


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 657 bits (1697), Expect = e-189
 Identities = 376/423 (89%)
 Strand = Plus / Plus

Query: 1   tcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggacgaacagtggggc 60
           ||||||||||| ||||||||||| || || |||||||| |||||||||||||| ||||||
Sbjct: 85  tcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggacgaacattggggc 144

Query: 61  tatgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgacagtctccggaag 120
           || ||||| |||||||| || ||||||||| |||||||||||||||||||  | |||| |
Sbjct: 145 tacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgacaggatacggagg 204

Query: 121 acggttgttgcgcacgtattcggtgaacgcactatggcgacgctggggcgtcttatgagc 180
           |||||||| |||||||| ||||||||||||||| |||| || |||| ||||||| |||||
Sbjct: 205 acggttgtggcgcacgtcttcggtgaacgcactctggccacactggagcgtcttctgagc 264

Query: 181 ctgctgtcaccctttga---cgtggtgatatagatgacggatggctggccgctgtatgaa 237
           ||||||||  |||||||   ||||||   || ||||||||||||||||||||||||||||
Sbjct: 265 ctgctgtcggcctttgaggtcgtggt---atggatgacggatggctggccgctgtatgaa 321

Query: 238 tcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcgg 297
           || ||||||||||||||||||||||| ||||||||||| || || ||||| |||||||| 
Sbjct: 322 tcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgcattgagcga 381

Query: 298 cataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctca 357
           ||||| ||||||||||| || || |||||| |||||| ||||||||| ||||||||||||
Sbjct: 382 cataatctgaatctgagacaacatctggcaaggctggtacggaagtcactgtcgttctca 441

Query: 358 aaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaa 417
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 442 aaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaacactatcag 501

Query: 418 taa 420
           |||
Sbjct: 502 taa 504

49) SbBS512_E4788 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 652 bits (1683), Expect = e-187
 Identities = 334/336 (99%)
 Strand = Plus / Plus

Query: 120 cgctggctgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 179
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cgctggttgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 228

Query: 180 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 288

Query: 240 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcacgtt 348

Query: 300 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacatctg 408

Query: 360 gcaaggctgggacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 419
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtc 468

Query: 420 atcgggcattatctgaacataaaacactatcagtaa 455
           ||||||||||||||||||||||||||||||||||||
Sbjct: 469 atcgggcattatctgaacataaaacactatcagtaa 504


 Score = 230 bits (592), Expect = 2e-60
 Identities = 118/119 (99%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttccgtcacttaaa 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctg 119
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctg 119

50) insB in NC_011747


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 629 bits (1623), Expect = e-180
 Identities = 358/399 (90%)
 Strand = Plus / Plus

Query: 1   gtgattgtctgcgctgaaatggacgaacagtggggctatgtcggggctaaatcgcgccag 60
           ||||||||||||||||||||||||||||| |||||||| ||||| |||||||| || |||
Sbjct: 109 gtgattgtctgcgctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcag 168

Query: 61  cgctggctgttttacgcgtatgacagtctccggaagacggttgttgcgcacgtattcggt 120
           |||||| |||||||||||||||||||  | |||| ||||||||| |||||||| ||||||
Sbjct: 169 cgctggttgttttacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggt 228

Query: 121 gaacgcactatggcgacgctggggcgtcttatgagcctgctgtcaccctttga---cgtg 177
           ||||||||| |||| || |||| ||||||| |||||||||||||  |||||||   ||||
Sbjct: 229 gaacgcactctggccacactggagcgtcttctgagcctgctgtcggcctttgaggtcgtg 288

Query: 178 gtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcac 237
           |   |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 289 g---tatggatgacggatggctggccgctgtatgaatcacgcctgaagggaaagctgcac 345

Query: 238 gtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcac 297
           || ||||||||||| || || ||||| |||||||| ||||| ||||||||||| || || 
Sbjct: 346 gttatcagcaagcgttacactcagcgcattgagcgacataatctgaatctgagacaacat 405

Query: 298 ctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaa 357
           |||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 406 ctggcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctgcatgacaag 465

Query: 358 gtcatcgggcattatctgaacataaaacactatcaataa 396
           ||||||||||||||||||||||||||||||||||| |||
Sbjct: 466 gtcatcgggcattatctgaacataaaacactatcagtaa 504

51) SbBS512_E1547 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 599 bits (1546), Expect = e-171
 Identities = 307/309 (99%)
 Strand = Plus / Plus

Query: 186 atacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggagcgt 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccacactggagcgt 255

Query: 246 cttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccgctg 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccgctg 315

Query: 306 tatgaatcacgcctgaagggaaagctgcacgttatcagcaagtgttacactcagcgcatt 365
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 316 tatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgcatt 375

Query: 366 gagcgacataatctgaatctgagacaacatctggcaaggctgggacggaagtcactgtcg 425
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 376 gagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtcactgtcg 435

Query: 426 ttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaacac 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaacac 495

Query: 486 tatcagtaa 494
           |||||||||
Sbjct: 496 tatcagtaa 504


 Score = 352 bits (910), Expect = 2e-97
 Identities = 182/185 (98%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 121 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgcgggctgttt 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 181 tacgc 185
           |||||
Sbjct: 181 tacgc 185

52) SbBS512_A0093 in NC_010660


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 589 bits (1519), Expect = e-168
 Identities = 338/381 (89%)
 Strand = Plus / Plus

Query: 1   atggacgaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcg 60
           ||||||||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||
Sbjct: 127 atggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcg 186

Query: 61  tataacaggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacg 120
           ||| ||||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || 
Sbjct: 187 tatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccaca 246

Query: 121 ctggggcgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggat 177
           |||| ||||||| ||||| |||||||  |||||||   |||||   ||||||||||||||
Sbjct: 247 ctggagcgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggat 303

Query: 178 ggctggccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatat 237
           |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| || 
Sbjct: 304 ggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttac 363

Query: 238 acgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacgg 297
           || ||||| |||||||| ||||| ||||||||||| || || |||||| |||||| ||||
Sbjct: 364 actcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacgg 423

Query: 298 aagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctg 357
           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 424 aagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctg 483

Query: 358 aacataaaacactatcaataa 378
           ||||||||||||||||| |||
Sbjct: 484 aacataaaacactatcagtaa 504

53) SbBS512_A0278 in NC_010660


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 589 bits (1519), Expect = e-168
 Identities = 338/381 (89%)
 Strand = Plus / Plus

Query: 1   atggacgaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcg 60
           ||||||||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||
Sbjct: 127 atggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcg 186

Query: 61  tataacaggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacg 120
           ||| ||||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || 
Sbjct: 187 tatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccaca 246

Query: 121 ctggggcgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggat 177
           |||| ||||||| ||||| |||||||  |||||||   |||||   ||||||||||||||
Sbjct: 247 ctggagcgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggat 303

Query: 178 ggctggccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatat 237
           |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| || 
Sbjct: 304 ggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttac 363

Query: 238 acgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacgg 297
           || ||||| |||||||| ||||| ||||||||||| || || |||||| |||||| ||||
Sbjct: 364 actcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacgg 423

Query: 298 aagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctg 357
           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 424 aagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctg 483

Query: 358 aacataaaacactatcaataa 378
           ||||||||||||||||| |||
Sbjct: 484 aacataaaacactatcagtaa 504

54) SbBS512_A0014 in NC_010660


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 587 bits (1514), Expect = e-168
 Identities = 338/381 (89%)
 Strand = Plus / Plus

Query: 1   atggacgaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcg 60
           ||||||||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||
Sbjct: 127 atggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcg 186

Query: 61  tatgacaggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacg 120
           ||||||||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || 
Sbjct: 187 tatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccaca 246

Query: 121 caggggcgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggat 177
           | || ||||||| ||||| |||||||  |||||||   |||||   ||||||||||||||
Sbjct: 247 ctggagcgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggat 303

Query: 178 ggctggccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatat 237
           |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| || 
Sbjct: 304 ggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttac 363

Query: 238 acgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacgg 297
           || ||||| |||||||| ||||| ||||||||||| || || |||||| |||||| ||||
Sbjct: 364 actcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacgg 423

Query: 298 aagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctg 357
           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 424 aagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctg 483

Query: 358 aacataaaacactatcaataa 378
           ||||||||||||||||| |||
Sbjct: 484 aacataaaacactatcagtaa 504

55) SbBS512_A0045 in NC_010660


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 587 bits (1514), Expect = e-168
 Identities = 338/381 (89%)
 Strand = Plus / Plus

Query: 1   atggacgaacagtggggatacgtcggggctaaatcgcgccagcgctggctgttttacgcg 60
           ||||||||||| ||||| |||||||| |||||||| || ||||||||| |||||||||||
Sbjct: 127 atggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcg 186

Query: 61  tatgacaggctccggaagacggttgttgcgcacgtattcggtgaacgcactatggcgacg 120
           ||||||||| | |||| ||||||||| |||||||| ||||||||||||||| |||| || 
Sbjct: 187 tatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctggccaca 246

Query: 121 caggggcgtcttatgagcttgctgtcaccctttga---cgtggtgatatggatgacggat 177
           | || ||||||| ||||| |||||||  |||||||   |||||   ||||||||||||||
Sbjct: 247 ctggagcgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggat 303

Query: 178 ggctggccactgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatat 237
           |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| || 
Sbjct: 304 ggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttac 363

Query: 238 acgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacgg 297
           || ||||| |||||||| ||||| ||||||||||| || || |||||| |||||| ||||
Sbjct: 364 actcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacgg 423

Query: 298 aagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctg 357
           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 424 aagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctg 483

Query: 358 aacataaaacactatcaataa 378
           ||||||||||||||||| |||
Sbjct: 484 aacataaaacactatcagtaa 504

56) SFxv_3229 in NC_017328


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 512 bits (1322), Expect = e-145
 Identities = 261/263 (99%)
 Strand = Plus / Plus

Query: 82  atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 142 aaactcaggccgcagtcggtaacctcgcgcatacaactgggcagtgatgtgattgtctgc 201
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 202 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggctgttt 261
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 262 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgcacgtcttcggtgaacgcactctg 240

Query: 322 gccacactggagcgtcttctgag 344
           |||||||||||||||||||||||
Sbjct: 241 gccacactggagcgtcttctgag 263


 Score = 440 bits (1135), Expect = e-123
 Identities = 225/225 (100%)
 Strand = Plus / Plus

Query: 345 tttgaggtcgtggtatggatgacggatggctggccgctgtatgaatcacgcctgaaggga 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tttgaggtcgtggtatggatgacggatggctggccgctgtatgaatcacgcctgaaggga 336

Query: 405 aagctgcacgttatcagcaagcgttacactcagcgcattgagcgacataatctgaatctg 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aagctgcacgttatcagcaagcgttacactcagcgcattgagcgacataatctgaatctg 396

Query: 465 agacaacatctggcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctg 524
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agacaacatctggcaaggctggtacggaagtcactgtcgttctcaaaatcggtggagctg 456

Query: 525 catgacaaggtcatcgggcattatctgaacataaaacactatcag 569
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 catgacaaggtcatcgggcattatctgaacataaaacactatcag 501

57) SbBS512_E4896 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 489 bits (1262), Expect = e-138
 Identities = 251/252 (100%)
 Strand = Plus / Plus

Query: 219 cgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccg 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccg 312

Query: 279 ctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgc 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgc 372

Query: 339 attgagcgacataatctgaatctgagacaacatctggcaaggctgggacggaagtcactg 398
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 373 attgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtcactg 432

Query: 399 tcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaa 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaa 492

Query: 459 cactatcagtaa 470
           ||||||||||||
Sbjct: 493 cactatcagtaa 504


 Score = 419 bits (1081), Expect = e-117
 Identities = 215/218 (99%)
 Strand = Plus / Plus

Query: 1   atgtcgcgccagtgcacgcattatggacgttggcctcaacacggttttacgtcacttaaa 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 121 gctgaaatggacgaacagtggggctacgtcggtgctaaatcacgtcagcgctggctgttt 180
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 181 tacgcgtatgacaggatacggaggacggttgtggcgca 218
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgca 218

58) SFxv_0905 in NC_017328


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 484 bits (1248), Expect = e-137
 Identities = 248/249 (100%)
 Strand = Plus / Plus

Query: 413 cgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccg 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccg 312

Query: 473 ctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgc 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgc 372

Query: 533 attgagcgacataatctgaatctgagacaacatctggcaaggctgggacggaagtcactg 592
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 373 attgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtcactg 432

Query: 593 tcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaa 652
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaa 492

Query: 653 cactatcag 661
           |||||||||
Sbjct: 493 cactatcag 501


 Score = 426 bits (1099), Expect = e-119
 Identities = 217/218 (100%)
 Strand = Plus / Plus

Query: 195 atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 255 aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 315 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggctgttt 374
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 375 tacgcgtatgacaggatacggaggacggttgtggcgca 412
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgca 218

59) SFxv_4704 in NC_017328


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 481 bits (1241), Expect = e-136
 Identities = 247/249 (99%)
 Strand = Plus / Plus

Query: 413 cgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccg 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cgtcttctgagcctgctgtcggcctttgaggtcgtggtatggatgacggatggctggccg 312

Query: 473 ctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgc 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgc 372

Query: 533 attgagcgacataatctgaatctgagacaacatctggcaaggctgggacggaagtcactg 592
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 373 attgagcgacataatctgaatctgagacaacatctggcaaggctggtacggaagtcactg 432

Query: 593 tcgttctcaaaatcggtggagctgcatgacaaggtcatcaggcattatctgaacataaaa 652
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 433 tcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaa 492

Query: 653 cactatcag 661
           |||||||||
Sbjct: 493 cactatcag 501


 Score = 426 bits (1099), Expect = e-119
 Identities = 217/218 (100%)
 Strand = Plus / Plus

Query: 195 atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcgcgccagtgcacgcattatgggcgttggcctcaacacggttttacgtcacttaaa 60

Query: 255 aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaactcaggccgcagtcggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgc 120

Query: 315 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggctgttt 374
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctggttgttt 180

Query: 375 tacgcgtatgacaggatacggaggacggttgtggcgca 412
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgcgtatgacaggatacggaggacggttgtggcgca 218

60) insB in NC_011745


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 473 bits (1220), Expect = e-133
 Identities = 272/304 (89%)
 Strand = Plus / Plus

Query: 102 gacggttgttgcgcacgtattcggtgaacgcactatggcgacgctggggcgtcttatgag 161
           ||||||||| |||||||| ||||||||||||||| |||| || |||| ||||||| ||||
Sbjct: 204 gacggttgtggcgcacgtcttcggtgaacgcactctggccacactggagcgtcttctgag 263

Query: 162 cctgctgtcaccctttga---cgtggtgatatggatgacggatggctggccgctgtatga 218
           |||||||||  |||||||   |||||   |||||||||||||||||||||||||||||||
Sbjct: 264 cctgctgtcggcctttgaggtcgtgg---tatggatgacggatggctggccgctgtatga 320

Query: 219 atcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcg 278
           ||| ||||||||||||||||||||||| ||||||||||| || || ||||| ||||||||
Sbjct: 321 atcacgcctgaagggaaagctgcacgttatcagcaagcgttacactcagcgcattgagcg 380

Query: 279 gcataaccggaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctc 338
            ||||| | ||||||||| || || |||||| |||||| ||||||||| |||||||||||
Sbjct: 381 acataatctgaatctgagacaacatctggcaaggctggtacggaagtcactgtcgttctc 440

Query: 339 aaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatca 398
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatcggtggagctgcatgacaaggtcatcgggcattatctgaacataaaacactatca 500

Query: 399 ataa 402
            |||
Sbjct: 501 gtaa 504


 Score = 136 bits (352), Expect = 3e-32
 Identities = 74/81 (91%)
 Strand = Plus / Plus

Query: 12  gtctgcgcggaaatggacgaacagtggggctatgtcggggctaaatcgcgccagcgctgg 71
           |||||||| |||||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 115 gtctgcgctgaaatggacgaacattggggctacgtcggtgctaaatcacgtcagcgctgg 174

Query: 72  ctgttttacgcgtatgacagg 92
            ||||||||||||||||||||
Sbjct: 175 ttgttttacgcgtatgacagg 195

61) SbBS512_E0766 in NC_010658


>NC_004741_P2|13|G13|30065056|NP_839227.1|Shigella_flexneri_2a_str._2457T|+|16675..17178|-|S4059|IS1 
          Length = 504

 Score = 412 bits (1063), Expect = e-115
 Identities = 235/261 (90%)
 Strand = Plus / Plus

Query: 248 ctggggcgtcttatgagcctgctgtcaccctttga---cgtggtgatatggatgacggat 304
           |||| ||||||| |||||||||||||  |||||||   |||||   ||||||||||||||
Sbjct: 247 ctggagcgtcttctgagcctgctgtcggcctttgaggtcgtgg---tatggatgacggat 303

Query: 305 ggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatat 364
           |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || 
Sbjct: 304 ggctggccgctgtatgaatcacgcctgaagggaaagctgcacgttatcagcaagcgttac 363

Query: 365 acgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacgg 424
           || ||||| |||||||| ||||| ||||||||||| || || |||||| |||||| ||||
Sbjct: 364 actcagcgcattgagcgacataatctgaatctgagacaacatctggcaaggctggtacgg 423

Query: 425 aagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctg 484
           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 424 aagtcactgtcgttctcaaaatcggtggagctgcatgacaaggtcatcgggcattatctg 483

Query: 485 aacataaaacactatcaataa 505
           ||||||||||||||||| |||
Sbjct: 484 aacataaaacactatcagtaa 504


 Score = 375 bits (969), Expect = e-104
 Identities = 206/226 (91%)
 Strand = Plus / Plus

Query: 17  cgcattatgggcgttggcctcaacacgattttacgtcacttaaaaaactcagaccgcagt 76
           ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 17  cgcattatgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccgcagt 76

Query: 77  cggtaacctcgcgcatacagccgggcagtgacgtcatcgtctgcgcggaaatggacgaac 136
           ||||||||||||||||||| ||||||||||| || || |||||||| |||||||||||||
Sbjct: 77  cggtaacctcgcgcatacaaccgggcagtgatgtgattgtctgcgctgaaatggacgaac 136

Query: 137 agtggggctatgtcggggctaaatcgcgccagcgctggctgttttacgcgtatgacagtc 196
           | |||||||| ||||| |||||||| || ||||||||| |||||||||||||||||||  
Sbjct: 137 attggggctacgtcggtgctaaatcacgtcagcgctggttgttttacgcgtatgacagga 196

Query: 197 tccggaagacggttgttgcgcacgtattcggtgaacgcactatggc 242
           | |||| ||||||||| |||||||| ||||||||||||||| ||||
Sbjct: 197 tacggaggacggttgtggcgcacgtcttcggtgaacgcactctggc 242