Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
HrcV protein |
NC_007086 (Xanthomonas campestris 8004) |
0.0 |
100 |
|
protein HrcV |
NC_003902 (Xanthomonas campestris ATCC 33913) |
0.0 |
100 |
|
type III secretion protein HrcV |
NC_017271 (Xanthomonas campestris 756C) |
0.0 |
99 |
|
HrcV protein |
NC_007508 (Xanthomonas campestris 85-10) |
0.0 |
95 |
|
protein HrcV |
NC_006834 (Xanthomonas oryzae KACC10331) |
0.0 |
95 |
|
HrcV protein |
NC_007705 (Xanthomonas oryzae MAFF 311018) |
0.0 |
95 |
|
HrcV protein |
NC_016010 (Xanthomonas axonopodis F1) |
0.0 |
95 |
|
protein HrcV |
NC_010717 (Xanthomonas oryzae PXO99A) |
0.0 |
95 |
|
type III secretory pathway component |
NC_010688 (Xanthomonas campestris B100) |
0.0 |
99 |
|
type III secretion protein HrcV |
NC_017267 (Xanthomonas oryzae BLS256) |
0.0 |
95 |
|
HrcV protein |
NC_003919 (Xanthomonas axonopodis 306) |
0.0 |
95 |
|
HrcV protein |
NC_020800 (Xanthomonas axonopodis Xac29-1) |
0.0 |
95 |
|
HrcV protein |
NC_020815 (Xanthomonas citri Aw12879) |
0.0 |
95 |
|
type III secretion inner membrane channel protein |
NC_015856 (Collimonas fungivorans Ter331) |
6e-178 |
66 |
|
type III secretory apparatus protein PcrD, membrane protein |
NC_015677 (Ramlibacter tataouinensis TTB310) |
5e-146 |
59 |
|
HrcV family type III secretion protein |
NC_015138 (Acidovorax avenae ATCC 19860) |
2e-145 |
57 |
|
Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
NC_021745 (Ralstonia solanacearum FQY_4) |
6e-142 |
58 |
|
hypothetical protein |
NC_003296 (Ralstonia solanacearum GMI1000) |
6e-142 |
58 |
|
hrp protein hrcv |
NC_017575 (Ralstonia solanacearum Po82) |
2e-141 |
58 |
|
Hypersensitivity response secretion protein hrcV, Type III secretory pathway component |
NC_014310 (Ralstonia solanacearum PSI07) |
2e-139 |
58 |
|
HrcV family type III secretion protein |
NC_008741 (Desulfovibrio vulgaris DP4) |
2e-104 |
43 |
|
type III secretion inner membrane protein HrcV family |
NC_005863 (Desulfovibrio vulgaris Hildenborough) |
2e-104 |
43 |
|
type III secretion protein, HrcV family |
NC_017311 (Desulfovibrio vulgaris RCH1) |
2e-104 |
43 |
|
type III secretion pore protein |
NC_018829 (Bordetella bronchiseptica MO149) |
4e-101 |
45 |
|
putative type III secretion pore protein |
NC_017223 (Bordetella pertussis CS) |
5e-101 |
45 |
|
type III secretion pore protein |
NC_002929 (Bordetella pertussis Tohama I) |
5e-101 |
45 |
|
type III secretion pore protein |
NC_018518 (Bordetella pertussis 18323) |
6e-101 |
45 |
|
type III secretion pore protein |
NC_018828 (Bordetella parapertussis Bpp5) |
5e-100 |
45 |
|
type III secretion pore protein |
NC_019382 (Bordetella bronchiseptica 253) |
6e-100 |
45 |
|
type III secretion pore protein |
NC_002927 (Bordetella bronchiseptica RB50) |
7e-100 |
45 |
|
type III secretion protein, hrcv family |
NC_014931 (Variovorax paradoxus EPS) |
2e-97 |
45 |
|
type III secretion pore protein |
NC_002928 (Bordetella parapertussis 12822) |
4e-94 |
45 |
|
Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
4e-89 |
42 |
|
type III secretory pathway subunit EscV |
NC_007645 (Hahella chejuensis KCTC 2396) |
3e-87 |
41 |
|
type III secretion pore protein |
NC_020127 (Lawsonia intracellularis N343) |
1e-86 |
42 |
|
type III secretion pore protein |
NC_008011 (Lawsonia intracellularis PHE/MN1-00) |
1e-86 |
42 |
|
type III secretion protein, HrcV family |
NC_011769 (Desulfovibrio vulgaris Miyazaki F) |
2e-86 |
41 |
|
putative membrane-bound Yop protein YscV |
NC_005813 (Yersinia pestis 91001) |
6e-80 |
41 |
|
type III secretion protein LcrD |
NC_010157 (Yersinia pestis Angola) |
6e-80 |
41 |
|
membrane-bound Yop protein |
NC_008122 (Yersinia pestis Antiqua) |
6e-80 |
41 |
|
low calcium response protein D |
NC_003131 (Yersinia pestis CO92) |
6e-80 |
41 |
|
low calcium response protein D |
NC_017153 (Yersinia pestis D106004) |
6e-80 |
41 |
|
low calcium response protein D |
NC_017157 (Yersinia pestis D182038) |
6e-80 |
41 |
|
membrane-bound Yop protein |
NC_009377 (Yersinia pestis Pestoides F) |
6e-80 |
41 |
|
low calcium response protein D |
NC_014017 (Yersinia pestis Z176003) |
6e-80 |
41 |
|
lcrD, yscV; membrane-bound Yop protein |
NC_006153 (Yersinia pseudotuberculosis IP 32953) |
6e-80 |
41 |
|
HrcV family type III secretion protein |
NC_010635 (Yersinia pseudotuberculosis PB1/+) |
6e-80 |
41 |
|
low calcium response locus membrane protein D,required for Yop secretion |
NC_015475 (Yersinia enterocolitica 105.5R(r)) |
7e-80 |
41 |
|
type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
NC_017565 (Yersinia enterocolitica Y11) |
7e-80 |
41 |
|
low calcium response locus membrane protein d |
NC_008791 (Yersinia enterocolitica 8081) |
9e-80 |
41 |
|
Secretion system apparatus protein ssaV |
NC_015224 (Yersinia enterocolitica 105.5R(r)) |
2e-79 |
41 |
|
type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
NC_017564 (Yersinia enterocolitica Y11) |
6e-79 |
41 |
|
secretion system apparatus protein SsaV |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
6e-77 |
41 |
|
type III secretory pathway, component EscV |
NC_020453 (Bradyrhizobium oligotrophicum S58) |
5e-72 |
41 |
|
secretion system apparatus protein SsaV |
NC_009997 (Shewanella baltica OS195) |
4e-57 |
43 |
|
type III secretion protein, HrcV family |
NC_016901 (Shewanella baltica OS678) |
4e-57 |
43 |
|
type III secretion protein, HrcV family |
NC_017579 (Shewanella baltica OS117) |
1e-56 |
43 |
|
secretion system apparatus protein SsaV |
NC_009052 (Shewanella baltica OS155) |
1e-56 |
43 |
|
type III secretion system apparatus protein, HrcV family |
NC_014012 (Shewanella violacea DSS12) |
6e-53 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_003902_P1' AND ph.id_pai_orf='13' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc