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Homologs of YPO0266 gene of NC_003143_P1

280

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) flhA1
( NP_991814.1 )

secretion system apparatus protein SsaV

NC_005810
(Yersinia pestis 91001)

0.0

100

2) A1122_03810
( YP_005520457.1 )

secretion system apparatus protein SsaV

NC_017168
(Yersinia pestis A1122)

0.0

100

3) YPO0266
( YP_002345347.1 )

secretion system apparatus protein SsaV

NC_003143
(Yersinia pestis CO92)

0.0

100

4) YPD4_0230
( YP_005503442.1 )

secretion system apparatus protein

NC_017154
(Yersinia pestis D106004)

0.0

100

5) YPD8_0235
( YP_005507318.1 )

secretion system apparatus protein

NC_017160
(Yersinia pestis D182038)

0.0

100

6) YPC_0742
( YP_005622728.1 )

secretion system apparatus protein

NC_017265
(Yersinia pestis Harbin 35)

0.0

100

7) y0525
( NP_667862.1 )

secretion system apparatus protein SsaV

NC_004088
(Yersinia pestis KIM)

0.0

100

8) YPZ3_0228
( YP_003566400.1 )

secretion system apparatus protein

NC_014029
(Yersinia pestis Z176003)

0.0

100

9) YPA_4017
( YP_653923.1 )

secretion system apparatus protein SsaV

NC_008150
(Yersinia pestis Antiqua)

0.0

100

10) YPDSF_3705
( YP_001165028.1 )

secretion system apparatus protein SsaV

NC_009381
(Yersinia pestis Pestoides F)

0.0

100

11) YPTB0322
( YP_068868.1 )

secretion system apparatus protein SsaV

NC_006155
(Yersinia pseudotuberculosis IP 32953)

0.0

12) YPTS_0346
( YP_001870792.1 )

secretion system apparatus protein SsaV

NC_010634
(Yersinia pseudotuberculosis PB1/+)

0.0

13) YpsIP31758_3819
( YP_001402773.1 )

secretion system apparatus protein SsaV

NC_009708
(Yersinia pseudotuberculosis IP 31758)

0.0

14) YPK_3907
( YP_001722625.1 )

secretion system apparatus protein SsaV

NC_010465
(Yersinia pseudotuberculosis YPIII)

0.0

15) YE105_C0332
( YP_004296533.1 )

Secretion system apparatus protein ssaV

NC_015224
(Yersinia enterocolitica 105.5R(r))

0.0

16) Y11_35391
( YP_006007038.1 )

type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)

NC_017564
(Yersinia enterocolitica Y11)

0.0

17) ssaV
( YP_002923050.1 )

secretion system apparatus protein SsaV

NC_012751
(Candidatus Hamiltonella defensa T5A)

0.0

18) Sbal117_2085
( YP_006037316.1 )

type III secretion protein, HrcV family

NC_017579
(Shewanella baltica OS117)

6e-177

19) Sbal_1969
( YP_001050342.1 )

secretion system apparatus protein SsaV

NC_009052
(Shewanella baltica OS155)

6e-177

20) Sbal195_2273
( YP_001554701.1 )

secretion system apparatus protein SsaV

NC_009997
(Shewanella baltica OS195)

3e-176

21) Sbal678_2283
( YP_005273490.1 )

type III secretion protein, HrcV family

NC_016901
(Shewanella baltica OS678)

3e-176

22) Sbal175_2396
( YP_006020953.1 )

type III secretion protein, HrcV family

NC_017571
(Shewanella baltica BA175)

1e-175

23) SVI_2235
( YP_003556984.1 )

type III secretion system apparatus protein, HrcV family

NC_014012
(Shewanella violacea DSS12)

1e-160

24) escV
( NP_902272.1 )

secretion system apparatus protein SsaV

NC_005085
(Chromobacterium violaceum ATCC 12472)

2e-154

25) NT01EI_0958
( YP_002932406.1 )

type III secretion protein, HrcV family

NC_012779
(Edwardsiella ictaluri 93-146)

2e-152

26) esaV
( YP_003294934.1 )

type III secretion protein, HrcV family

NC_013508
(Edwardsiella tarda EIB202)

4e-146

27) esaV
( YP_005698433.1 )

protein EsaV

NC_017309
(Edwardsiella tarda FL6-60)

4e-146

28) ETAC_04215
( YP_007628334.1 )

secretion system apparatus protein SsaV

NC_020796
(Edwardsiella tarda C07-087)

6e-146

29) ssaV
( YP_005242315.1 )

secretion system apparatus protein SsaV

NC_016857
(Salmonella enterica ST4/74)

2e-138

30) SSPA1337
( YP_002142176.1 )

secretion system apparatus protein SsaV

NC_011147
(Salmonella enterica AKU12601)

4e-138

31) ssaV
( YP_150690.1 )

Secretion system apparatus

NC_006511
(Salmonella enterica ATCC 9150)

4e-138

32) CFSAN002050_13465
( YP_008260604.1 )

secretion system apparatus protein SsaV

NC_021818
(Salmonella enterica CFSAN002050)

4e-138

33) SeSA_A1510
( YP_002114427.1 )

secretion system apparatus protein SsaV

NC_011094
(Salmonella enterica CVM19633)

4e-138

34) ssaV
( YP_216422.1 )

secretion system apparatus protein SsaV

NC_006905
(Salmonella enterica SC-B67)

4e-138

35) SE451236_12935
( YP_008265613.1 )

secretion system apparatus protein SsaV

NC_021820
(Salmonella enterica 08-1736)

5e-138

36) ssaV
( YP_005237284.1 )

secretion system apparatus protein SsaV

NC_016856
(Salmonella enterica 14028S)

5e-138

37) SBOV14111
( YP_008505281.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

5e-138

38) SEEH1578_16305
( YP_008247320.1 )

secretion system apparatus protein SsaV

NC_021810
(Salmonella enterica 41578)

5e-138

39) SU5_02030
( YP_006087664.1 )

Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)

NC_017623
(Salmonella enterica B182)

5e-138

40) SEEB0189_12465
( YP_008308808.1 )

secretion system apparatus protein SsaV

NC_021844
(Salmonella enterica CFSAN000189)

5e-138

41) CFSAN001921_10075
( YP_008255389.1 )

secretion system apparatus protein SsaV

NC_021814
(Salmonella enterica CFSAN001921)

5e-138

42) CFSAN002069_01930
( YP_008249246.1 )

secretion system apparatus protein SsaV

NC_021812
(Salmonella enterica CFSAN002069)

5e-138

43) SeD_A1929
( YP_002215718.1 )

secretion system apparatus protein SsaV

NC_011205
(Salmonella enterica CT_02021853)

5e-138

44) STMMW_14191
( YP_005232473.1 )

putative type III secretion protein

NC_016854
(Salmonella enterica D23580)

5e-138

45) ssaV
( NP_460379.1 )

secretion system apparatus protein SsaV

NC_003197
(Salmonella enterica LT2)

5e-138

46) ssaV
( YP_002243731.1 )

secretion system apparatus protein SsaV

NC_011294
(Salmonella enterica P125109)

5e-138

47) SPAB_01911
( YP_001588134.1 )

secretion system apparatus protein SsaV

NC_010102
(Salmonella enterica SGSC4150; SPB7)

5e-138

48) ssaV
( YP_005181258.1 )

putative type III secretion protein

NC_016810
(Salmonella enterica SL1344)

5e-138

49) SNSL254_A1525
( YP_002040666.1 )

secretion system apparatus protein SsaV

NC_011080
(Salmonella enterica SL254)

5e-138

50) SeHA_C1547
( YP_002045417.1 )

secretion system apparatus protein SsaV

NC_011083
(Salmonella enterica SL476)

5e-138

51) SeAg_B1759
( YP_002146628.1 )

secretion system apparatus protein SsaV

NC_011149
(Salmonella enterica SL483)

5e-138

52) STMDT12_C14300
( YP_005247126.1 )

secretion system apparatus protein SsaV

NC_016860
(Salmonella enterica T000240)

5e-138

53) STU288_03390
( YP_007901783.1 )

secretion system apparatus protein SsaV

NC_021151
(Salmonella enterica U288)

5e-138

54) ssaV
( YP_005251918.1 )

secretion system apparatus protein SsaV

NC_016863
(Salmonella enterica UK-1)

5e-138

55) CFSAN001992_04520
( YP_007470662.1 )

secretion system apparatus protein SsaV

NC_020307
(Salmonella enterica CFSAN001992)

6e-138

56) ssaV
( YP_002226671.1 )

secretion system apparatus protein SsaV

NC_011274
(Salmonella enterica 287/91)

1e-137

57) ssaV
( YP_008480901.1 )

putative type III secretion protein

NC_022221
(Salmonella enterica CDC1983-67)

1e-137

58) ssaV
( YP_005212439.1 )

putative type III secretion protein

NC_016831
(Salmonella enterica RKS5078)

1e-137

59) I137_05675
( YP_008380645.1 )

secretion system apparatus protein SsaV

NC_021984
(Salmonella enterica S06004)

1e-137

60) ssaV
( YP_005396811.1 )

type III secretion protein

NC_017046
(Salmonella enterica 798)

6e-137

61) ssaV
( YP_002637873.1 )

secretion system apparatus protein SsaV

NC_012125
(Salmonella enterica RKS4594)

6e-137

62) SN31241_24840
( YP_008360400.1 )

Secretion system apparatus protein SsaV

NC_021902
(Salmonella enterica USMARC-S3124.1)

6e-137

63) SG1300
( YP_454980.1 )

secretion system apparatus protein SsaV

NC_007712
(Sodalis glossinidius morsitans)

1e-135

64) ssaV
( NP_456114.1 )

putative type III secretion protein

NC_003198
(Salmonella enterica CT18)

3e-134

65) STBHUCCB_13720
( YP_005216930.1 )

Secretion system apparatus protein ssaV

NC_016832
(Salmonella enterica P-stx-12)

3e-134

66) ssaV
( NP_805085.1 )

secretion system apparatus protein SsaV

NC_004631
(Salmonella enterica Ty2)

3e-134

67) TY21A_06515
( YP_007925607.1 )

secretion system apparatus protein SsaV

NC_021176
(Salmonella enterica Ty21a)

3e-134

68) SARI_01568
( YP_001570604.1 )

secretion system apparatus protein SsaV

NC_010067
(Salmonella enterica RSK2980)

1e-131

69) HCH_05101
( YP_436207.1 )

type III secretory pathway subunit EscV

NC_007645
(Hahella chejuensis KCTC 2396)

9e-132

70) escV
( YP_003236089.1 )

putative translocator EscV

NC_013364
(Escherichia coli 11128)

3e-126

71) escV
( YP_003366503.1 )

T3SS structural protein EscV

NC_013716
(Citrobacter rodentium ICC168)

4e-124

72) escV
( YP_003232152.1 )

T3SS structure protein EscV

NC_013361
(Escherichia coli 11368)

1e-123

73) escV
( YP_003223476.1 )

translocator EscV

NC_013353
(Escherichia coli 12009)

2e-123

74) escV
( YP_002331411.1 )

translocator EscV

NC_011601
(Escherichia coli E2348/69)

1e-122

75) HCH_03273
( YP_434455.1 )

type III secretory pathway subunit EscV

NC_007645
(Hahella chejuensis KCTC 2396)

7e-119

76) NH44784_014751
( YP_008028570.1 )

Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

8e-118

77) bcrD
( YP_006899813.1 )

type III secretion pore protein

NC_018829
(Bordetella bronchiseptica MO149)

3e-117

78) bcrD
( YP_005590294.1 )

putative type III secretion pore protein

NC_017223
(Bordetella pertussis CS)

4e-117

79) bcrD
( NP_880904.1 )

type III secretion pore protein

NC_002929
(Bordetella pertussis Tohama I)

4e-117

80) bcrD
( YP_006625517.1 )

type III secretion pore protein

NC_018518
(Bordetella pertussis 18323)

5e-117

81) bcrD
( YP_006967908.1 )

type III secretion pore protein

NC_019382
(Bordetella bronchiseptica 253)

2e-116

82) bcrD
( NP_888157.1 )

type III secretion pore protein

NC_002927
(Bordetella bronchiseptica RB50)

2e-116

83) bcrD
( YP_006895356.1 )

type III secretion pore protein

NC_018828
(Bordetella parapertussis Bpp5)

2e-116

84) escV
( YP_003501875.1 )

escV

NC_013941
(Escherichia coli CB9615)

3e-116

85) ECH74115_5063
( YP_002273167.1 )

type III secretion protein, HrcV family

NC_011353
(Escherichia coli EC4115)

3e-116

86) escV
( NP_290269.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

3e-116

87) ECO55CA74_21230
( YP_006161351.1 )

escV

NC_017656
(Escherichia coli RM12579)

3e-116

88) ECs4569
( NP_312596.1 )

hypothetical protein

NC_002695
(Escherichia coli Sakai)

3e-116

89) escV
( YP_003080481.1 )

LEE-encoded type III secretion system factor

NC_013008
(Escherichia coli TW14359)

3e-116

90) CDCO157_4304
( YP_006315169.1 )

hypothetical protein

NC_017906
(Escherichia coli Xuzhou21)

3e-116

91) lcrD
( YP_004677271.1 )

Low calcium response locus protein D

NC_015717
(Hyphomicrobium sp. MC1)

9e-115

92) bcrD
( NP_884466.1 )

type III secretion pore protein

NC_002928
(Bordetella parapertussis 12822)

1e-112

93) hrpI
( YP_003539962.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

8e-108

94) hrcV
( YP_003529892.1 )

type III secretion inner membrane protein HrcV

NC_013961
(Erwinia amylovora CFBP1430)

8e-108

95) Dvul_3008
( YP_961207.1 )

HrcV family type III secretion protein

NC_008741
(Desulfovibrio vulgaris DP4)

8e-108

96) DVUA0104
( YP_009144.1 )

type III secretion inner membrane protein HrcV family

NC_005863
(Desulfovibrio vulgaris Hildenborough)

8e-108

97) Deval_3200
( YP_005703979.1 )

type III secretion protein, HrcV family

NC_017311
(Desulfovibrio vulgaris RCH1)

8e-108

98) sctV
( YP_007365649.1 )

type III secretion pore protein

NC_020127
(Lawsonia intracellularis N343)

2e-107

99) yscV
( YP_594923.1 )

type III secretion pore protein

NC_008011
(Lawsonia intracellularis PHE/MN1-00)

2e-107

100) hrpI
( YP_001906469.1 )

Harpin secretion protein HrpI (hrp cluster)

NC_010694
(Erwinia tasmaniensis Et1/99)

1e-106

101) hrcV
( YP_005804085.1 )

type III secretion inner membrane protein HrcV

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-106

102) hrpI
( YP_002650068.1 )

hrp/hrc type III secretion system-Hrp/hrc secretion/translocation pathway-harpin secretion protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-106

103) hrpI
( YP_005818261.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-harpin secretion protein

NC_017445
(Erwinia sp. Ejp617)

2e-106

104) DvMF_2415
( YP_002436824.1 )

type III secretion protein, HrcV family

NC_011769
(Desulfovibrio vulgaris Miyazaki F)

3e-106

105) yscV
( YP_005082203.1 )

Low calcium response locus protein D (LcrD)

NC_016642
(Pseudovibrio sp. FO-BEG1)

2e-104

106) yscV
( NP_995377.1 )

putative membrane-bound Yop protein YscV

NC_005813
(Yersinia pestis 91001)

2e-104

107) lcrD
( YP_001604466.1 )

type III secretion protein LcrD

NC_010157
(Yersinia pestis Angola)

2e-104

108) YPA_CD0028
( YP_636820.1 )

membrane-bound Yop protein

NC_008122
(Yersinia pestis Antiqua)

2e-104

109) yscV
( NP_395168.1 )

low calcium response protein D

NC_003131
(Yersinia pestis CO92)

2e-104

110) yscV
( YP_005503168.1 )

low calcium response protein D

NC_017153
(Yersinia pestis D106004)

2e-104

111) yscV
( YP_005506951.1 )

low calcium response protein D

NC_017157
(Yersinia pestis D182038)

2e-104

112) YPDSF_3983
( YP_001154612.1 )

membrane-bound Yop protein

NC_009377
(Yersinia pestis Pestoides F)

2e-104

113) yscV
( YP_003560527.1 )

low calcium response protein D

NC_014017
(Yersinia pestis Z176003)

2e-104

114) pYV0060
( YP_068469.1 )

lcrD, yscV; membrane-bound Yop protein

NC_006153
(Yersinia pseudotuberculosis IP 32953)

2e-104

115) YPTS_4279
( YP_001874679.1 )

HrcV family type III secretion protein

NC_010635
(Yersinia pseudotuberculosis PB1/+)

2e-104

116) lcrD
( YP_001004072.1 )

low calcium response locus membrane protein d

NC_008791
(Yersinia enterocolitica 8081)

5e-104

117) YE105_P0016
( YP_004424918.1 )

low calcium response locus membrane protein D,required for Yop secretion

NC_015475
(Yersinia enterocolitica 105.5R(r))

6e-104

118) Y11_p0841
( YP_006007932.1 )

type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)

NC_017565
(Yersinia enterocolitica Y11)

6e-104

119) Dd586_1888
( YP_003333452.1 )

type III secretion protein, HrcV family

NC_013592
(Dickeya dadantii Ech586)

7e-104

120) PCC21_022840
( YP_006646940.1 )

protein HrcV

NC_018525
(Pectobacterium carotovorum PCC21)

1e-103

121) PC1_2206
( YP_003017781.1 )

HrcV family type III secretion protein

NC_012917
(Pectobacterium carotovorum PC1)

5e-103

122) hrpI
( YP_050180.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-102

123) Marme_1079
( YP_004312190.1 )

HrcV family type III secretion protein

NC_015276
(Marinomonas mediterranea MMB-1)

3e-101

124) Dd1591_1891
( YP_003004220.1 )

HrcV family type III secretion protein

NC_012912
(Dickeya zeae Ech1591)

4e-101

125) hrcV
( NP_791229.1 )

type III secretion protein HrcV

NC_004578
(Pseudomonas syringae DC3000)

1e-100

126) sctV, cdsV
( YP_004651583.1 )

type III secretion integral inner membrane protein

NC_015702
(Parachlamydia acanthamoebae UV-7)

2e-100

127) D781_3944
( YP_007346319.1 )

type III secretion protein, HrcV family

NC_020064
(Serratia marcescens FGI94)

3e-100

128) SG2090
( YP_455770.1 )

type III secretion apparatus InvA

NC_007712
(Sodalis glossinidius morsitans)

3e-100

129) flhA
( YP_008112701.1 )

putative flagellar biosynthesis protein FlhA

NC_021505
(Pseudomonas putida NBRC 14164)

3e-98

130) invA
( YP_002924271.1 )

type III needle complex export protein

NC_012751
(Candidatus Hamiltonella defensa T5A)

9e-98

131) SG0563
( YP_454243.1 )

type III secretion apparatus InvA

NC_007712
(Sodalis glossinidius morsitans)

1e-97

132) Pmen_0039
( YP_001185545.1 )

HrcV family type III secretion protein

NC_009439
(Pseudomonas mendocina ymp)

4e-97

133) lcrD
( YP_002887716.1 )

low calcium response protein D

NC_012686
(Chlamydia trachomatis Jali20)

7e-96

134) O179_00475
( YP_008443133.1 )

Low calcium response locus protein D

NC_022110
(Chlamydia trachomatis J/27-97)

8e-96

135) lcrD
( YP_515465.1 )

type III secretory flagellar biosynthesis

NC_007899
(Chlamydophila felis Fe/C-56)

1e-95

136) lcrD
( YP_001654429.1 )

low calcium response protein D

NC_010287
(Chlamydia trachomatis 434/Bu)

9e-96

137) A363_00093
( YP_007731817.1 )

type III secretion system protein InvA

NC_020966
(Chlamydia trachomatis A/363)

9e-96

138) A5291_00092
( YP_007723628.1 )

type III secretion system protein InvA

NC_020939
(Chlamydia trachomatis A/5291)

9e-96

139) A7249_00092
( YP_007728101.1 )

type III secretion system protein InvA

NC_020944
(Chlamydia trachomatis A/7249)

9e-96

140) lcrD
( YP_327889.1 )

low calcium response protein D

NC_007429
(Chlamydia trachomatis A/HAR-13)

9e-96

141) lcrD
( YP_005155925.1 )

low calcium response protein D

NC_016798
(Chlamydia trachomatis A2497)

9e-96

142) CTO_0095
( YP_005812900.1 )

Type III secretion inner membrane protein SctV

NC_017437
(Chlamydia trachomatis A2497)

9e-96

143) lcrD
( YP_002888593.1 )

low calcium response protein D

NC_012687
(Chlamydia trachomatis B/TZ1A828/OT)

9e-96

144) sctV
( YP_005811142.1 )

type III secretion inner membrane protein SctV

NC_017434
(Chlamydia trachomatis D-EC)

9e-96

145) sctV
( YP_005812020.1 )

type III secretion inner membrane protein SctV

NC_017436
(Chlamydia trachomatis D-LC)

9e-96

146) O176_00485
( YP_008467505.1 )

Low calcium response locus protein D

NC_022119
(Chlamydia trachomatis D/13-96)

9e-96

147) O177_00490
( YP_008442215.1 )

Low calcium response locus protein D

NC_022109
(Chlamydia trachomatis D/14-96)

9e-96

148) SOTOND1_00092
( YP_007732716.1 )

type III secretion system protein InvA

NC_020967
(Chlamydia trachomatis D/SotonD1)

9e-96

149) SOTOND5_00092
( YP_007727210.1 )

type III secretion system protein InvA

NC_020943
(Chlamydia trachomatis D/SotonD5)

9e-96

150) SOTOND6_00092
( YP_007733610.1 )

type III secretion system protein InvA

NC_020968
(Chlamydia trachomatis D/SotonD6)

9e-96

151) lcrD
( NP_219593.1 )

low calcium response D

NC_000117
(Chlamydia trachomatis D/UW-3/CX)

9e-96

152) O175_00485
( YP_008441297.1 )

Low calcium response locus protein D

NC_022108
(Chlamydia trachomatis E/12-94)

9e-96

153) O169_00485
( YP_008465651.1 )

Low calcium response locus protein D

NC_022117
(Chlamydia trachomatis F/1-93)

9e-96

154) O173_00485
( YP_008440369.1 )

Low calcium response locus protein D

NC_022107
(Chlamydia trachomatis F/11-96)

9e-96

155) O170_00485
( YP_008439442.1 )

Low calcium response locus protein D

NC_022106
(Chlamydia trachomatis F/2-93)

9e-96

156) O172_00485
( YP_008466575.1 )

Low calcium response locus protein D

NC_022118
(Chlamydia trachomatis F/6-94)

9e-96

157) SOTONF3_00092
( YP_007730032.1 )

type III secretion system protein InvA

NC_020964
(Chlamydia trachomatis F/SotonF3)

9e-96

158) lcrD
( YP_006360029.1 )

low calcium response protein D

NC_017951
(Chlamydia trachomatis F/SW4)

9e-96

159) lcrD
( YP_006361777.1 )

low calcium response protein D

NC_017953
(Chlamydia trachomatis F/SW5)

9e-96

160) G11074_00465
( YP_005814810.1 )

low calcium response protein D

NC_017440
(Chlamydia trachomatis G/11074)

9e-96

161) G11222_00470
( YP_005808363.1 )

low calcium response protein D

NC_017430
(Chlamydia trachomatis G/11222)

9e-96

162) CTG9301_00465
( YP_005810217.1 )

low calcium response protein D

NC_017432
(Chlamydia trachomatis G/9301)

9e-96

163) G9768_00465
( YP_005807444.1 )

low calcium response protein D

NC_017429
(Chlamydia trachomatis G/9768)

9e-96

164) SOTONG1_00091
( YP_007725420.1 )

type III secretion system protein InvA

NC_020941
(Chlamydia trachomatis G/SotonG1)

9e-96

165) SOTONIA1_00092
( YP_007735394.1 )

type III secretion system protein InvA

NC_020970
(Chlamydia trachomatis Ia/SotonIa1)

9e-96

166) SOTONIA3_00092
( YP_007724527.1 )

type III secretion system protein InvA

NC_020940
(Chlamydia trachomatis Ia/SotonIa3)

9e-96

167) O178_00480
( YP_008468435.1 )

Low calcium response locus protein D

NC_022120
(Chlamydia trachomatis Ia20-97)

9e-96

168) O180_00480
( YP_008469362.1 )

Low calcium response locus protein D

NC_022121
(Chlamydia trachomatis J/31-98)

9e-96

169) CTJTET1_00470
( YP_008348792.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021892
(Chlamydia trachomatis J/6276tet1)

9e-96

170) SOTONK1_00092
( YP_007730924.1 )

type III secretion system protein InvA

NC_020965
(Chlamydia trachomatis K/SotonK1)

9e-96

171) L1115_00091
( YP_007714719.1 )

type III secretion system protein InvA

NC_020929
(Chlamydia trachomatis L1/115)

9e-96

172) L11322_00091
( YP_007737183.1 )

type III secretion system protein InvA

NC_020972
(Chlamydia trachomatis L1/1322/p2)

9e-96

173) L1224_00091
( YP_007738073.1 )

type III secretion system protein InvA

NC_020973
(Chlamydia trachomatis L1/224)

9e-96

174) L1440_00091
( YP_007721845.1 )

type III secretion system protein InvA

NC_020937
(Chlamydia trachomatis L1/440/LN)

9e-96

175) L225667R_00091
( YP_007715608.1 )

type III secretion system protein InvA

NC_020930
(Chlamydia trachomatis L2/25667R)

9e-96

176) CTLFINAL_01820
( YP_007852306.1 )

low calcium response protein D

NC_021052
(Chlamydia trachomatis L2/434/Bu(f))

9e-96

177) CTLINITIAL_01820
( YP_007851366.1 )

low calcium response protein D

NC_021050
(Chlamydia trachomatis L2/434/Bu(i))

9e-96

178) L2B795_00091
( YP_007722737.1 )

type III secretion system protein InvA

NC_020938
(Chlamydia trachomatis L2b/795)

9e-96

179) L2B8200_00091
( YP_007728998.1 )

type III secretion system protein InvA

NC_020945
(Chlamydia trachomatis L2b/8200/07)

9e-96

180) L2BAMS1_00091
( YP_007718280.1 )

type III secretion system protein InvA

NC_020933
(Chlamydia trachomatis L2b/Ams1)

9e-96

181) L2BAMS2_00091
( YP_007719170.1 )

type III secretion system protein InvA

NC_020934
(Chlamydia trachomatis L2b/Ams2)

9e-96

182) L2BAMS3_00091
( YP_007741631.1 )

type III secretion system protein InvA

NC_020977
(Chlamydia trachomatis L2b/Ams3)

9e-96

183) L2BAMS4_00091
( YP_007742521.1 )

type III secretion system protein InvA

NC_020978
(Chlamydia trachomatis L2b/Ams4)

9e-96

184) L2BAMS5_00091
( YP_007720955.1 )

type III secretion system protein InvA

NC_020936
(Chlamydia trachomatis L2b/Ams5)

9e-96

185) L2BCAN1_00093
( YP_007720062.1 )

type III secretion system protein InvA

NC_020935
(Chlamydia trachomatis L2b/Canada1)

9e-96

186) L2BCAN2_00091
( YP_007717388.1 )

type III secretion system protein InvA

NC_020932
(Chlamydia trachomatis L2b/Canada2)

9e-96

187) L2BCV204_00091
( YP_007740741.1 )

type III secretion system protein InvA

NC_020976
(Chlamydia trachomatis L2b/CV204)

9e-96

188) L2BLST_00091
( YP_007739851.1 )

type III secretion system protein InvA

NC_020975
(Chlamydia trachomatis L2b/LST)

9e-96

189) L2BUCH2_00091
( YP_007716498.1 )

type III secretion system protein InvA

NC_020931
(Chlamydia trachomatis L2b/UCH-2)

9e-96

190) L3404_00091
( YP_007738963.1 )

type III secretion system protein InvA

NC_020974
(Chlamydia trachomatis L3/404/LN)

9e-96

191) CTRC342_00470
( YP_008346904.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021890
(Chlamydia trachomatis RC-F(s)/342)

9e-96

192) CTRC852_00475
( YP_008345031.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021888
(Chlamydia trachomatis RC-F(s)/852)

9e-96

193) CTRC69_00470
( YP_008350882.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021895
(Chlamydia trachomatis RC-F/69)

9e-96

194) CTRC122_00465
( YP_008347856.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021891
(Chlamydia trachomatis RC-J(s)/122)

9e-96

195) CTRC943_00465
( YP_008351805.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021896
(Chlamydia trachomatis RC-J/943)

9e-96

196) CTRC953_00470
( YP_008345986.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021889
(Chlamydia trachomatis RC-J/953)

9e-96

197) CTRC966_00475
( YP_008353652.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021898
(Chlamydia trachomatis RC-J/966)

9e-96

198) CTRC971_00475
( YP_008354578.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021899
(Chlamydia trachomatis RC-J/971)

9e-96

199) CTRC3_00470
( YP_008352732.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021897
(Chlamydia trachomatis RC-L2(s)/3)

9e-96

200) CTRC46_00470
( YP_008344107.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021887
(Chlamydia trachomatis RC-L2(s)/46)

9e-96

201) CTRC55_00475
( YP_008349749.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_021893
(Chlamydia trachomatis RC-L2/55)

9e-96

202) lcrD
( YP_001653441.1 )

low calcium response protein D

NC_010280
(Chlamydia trachomatis UCH-1)

9e-96

203) CAB445
( YP_219859.1 )

membrane transport protein

NC_004552
(Chlamydophila abortus S26/3)

3e-95

204) hrcV
( YP_003883240.1 )

type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)

NC_014500
(Dickeya dadantii 3937)

3e-95

205) E11023_00470
( YP_005809292.1 )

low calcium response protein D

NC_017431
(Chlamydia trachomatis E/11023)

1e-94

206) E150_00475
( YP_005813885.1 )

low calcium response protein D

NC_017439
(Chlamydia trachomatis E/150)

1e-94

207) BOUR_00092
( YP_007736288.1 )

type III secretion system protein InvA

NC_020971
(Chlamydia trachomatis E/Bour)

1e-94

208) SOTONE4_00092
( YP_007734501.1 )

type III secretion system protein InvA

NC_020969
(Chlamydia trachomatis E/SotonE4)

1e-94

209) SOTONE8_00092
( YP_007726313.1 )

type III secretion system protein InvA

NC_020942
(Chlamydia trachomatis E/SotonE8)

1e-94

210) lcrD
( YP_006360901.1 )

low calcium response protein D

NC_017952
(Chlamydia trachomatis E/SW3)

1e-94

211) lcrD
( YP_007539790.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_020511
(Chlamydia trachomatis IU824)

1e-94

212) lcrD
( YP_007540665.1 )

low calcium response protein D (predicted to be part of the TTSS apparatus)

NC_020512
(Chlamydia trachomatis IU888)

1e-94

213) lcrD
( YP_005815725.1 )

low calcium response protein D

NC_017441
(Chlamydia trachomatis Sweden2)

1e-94

214) BN356_4551
( YP_006974365.1 )

putative membrane transport protein

NC_019391
(Chlamydia psittaci 01DC12)

2e-94

215) G5O_0495
( YP_005663158.1 )

type III secretion inner membrane protein SctV

NC_017287
(Chlamydia psittaci 6BC)

2e-94

216) B711_0534
( YP_006739501.1 )

type III secretion , HrcV family protein

NC_018625
(Chlamydia psittaci CP3)

2e-94

217) AO9_02410
( YP_007438192.1 )

putative membrane transport protein

NC_020248
(Chlamydia psittaci Mat116)

2e-94

218) Cpsi_4511
( YP_004064418.1 )

putative membrane transport protein

NC_014796
(Chlamydia psittaci RD1)

2e-94

219) A464_2920
( YP_008323514.1 )

Type III secretion inner membrane channel protein (LcrDHrcVEscVSsaV); Invasion protein InvA

NC_021870
(Salmonella bongori N268-08)

2e-94

220) invA
( YP_004731336.1 )

virulence associated secretory protein

NC_015761
(Salmonella bongori NCTC 12419)

4e-94

221) CPS0A_0505
( YP_005664155.1 )

putative membrane transport protein

NC_017289
(Chlamydia psittaci 01DC11)

6e-94

222) CPS0B_0502
( YP_005667080.1 )

putative type III secretion inner membrane protein

NC_017292
(Chlamydia psittaci 02DC15)

6e-94

223) CPS0D_0504
( YP_005665127.1 )

putative membrane transport protein

NC_017290
(Chlamydia psittaci 08DC60)

6e-94

224) CPSIT_0498
( YP_004422304.1 )

putative membrane transport protein

NC_015470
(Chlamydia psittaci 6BC)

6e-94

225) CPS0C_0507
( YP_005666102.1 )

putative membrane transport protein

NC_017291
(Chlamydia psittaci C19/98)

6e-94

226) B598_0505
( YP_006734191.1 )

type III secretion , HrcV family protein

NC_018620
(Chlamydia psittaci GR9)

6e-94

227) B602_0501
( YP_006737379.1 )

type III secretion , HrcV family protein

NC_018623
(Chlamydia psittaci M56)

6e-94

228) B599_0498
( YP_006741621.1 )

type III secretion , HrcV family protein

NC_018627
(Chlamydia psittaci MN)

6e-94

229) B712_0503
( YP_006740586.1 )

type III secretion , HrcV family protein

NC_018626
(Chlamydia psittaci NJ1)

6e-94

230) B600_0534
( YP_006735258.1 )

type III secretion , HrcV family protein

NC_018621
(Chlamydia psittaci VS225)

6e-94

231) B603_0509
( YP_006738427.1 )

type III secretion , HrcV family protein

NC_018624
(Chlamydia psittaci WC)

6e-94

232) B601_0505
( YP_006736339.1 )

type III secretion , HrcV family protein

NC_018622
(Chlamydia psittaci WS/RT/E30)

6e-94

233) CTL2C_683
( YP_004717220.1 )

regulatory protein

NC_015744
(Chlamydia trachomatis L2c)

2e-93

234) sctV
( YP_007748.1 )

type III secretion pathway protein SctV

NC_005861
(Candidatus Protochlamydia amoebophila UWE25)

3e-93

235) sctV
( YP_004672133.1 )

type III secretion integral inner membrane protein

NC_015713
(Simkania negevensis Z)

5e-93

236) sctV
( YP_003709221.1 )

type III secretion inner membrane protein SctV

NC_014225
(Waddlia chondrophila WSU 86-1044)

2e-91

237) SBOV29221
( YP_008506744.1 )

invasion protein InvA

NC_022241
(Salmonella enterica 3114)

4e-89

238) SARI_00077
( YP_001569172.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

1e-88

239) SE451236_20575
( YP_008267102.1 )

type III secretion system protein InvA

NC_021820
(Salmonella enterica 08-1736)

4e-88

240) invA
( YP_005239005.1 )

needle complex export protein

NC_016856
(Salmonella enterica 14028S)

4e-88

241) invA
( YP_002227640.1 )

secretory protein

NC_011274
(Salmonella enterica 287/91)

4e-88

242) SEEH1578_23290
( YP_008248704.1 )

type III secretion system protein InvA

NC_021810
(Salmonella enterica 41578)

4e-88

243) invA
( YP_005398259.1 )

secretory apparatus of type III secretion system

NC_017046
(Salmonella enterica 798)

4e-88

244) SSPA2568
( YP_002143413.1 )

hypothetical protein

NC_011147
(Salmonella enterica AKU12601)

4e-88

245) invA
( YP_151923.1 )

secretory protein

NC_006511
(Salmonella enterica ATCC 9150)

4e-88

246) SU5_03377
( YP_006088984.1 )

Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), Invasion protein InvA

NC_017623
(Salmonella enterica B182)

4e-88

247) invA
( YP_008482459.1 )

putative secretory protein

NC_022221
(Salmonella enterica CDC1983-67)

4e-88

248) SEEB0189_05690
( YP_008307489.1 )

type III secretion system protein InvA

NC_021844
(Salmonella enterica CFSAN000189)

4e-88

249) CFSAN001921_02595
( YP_008253927.1 )

type III secretion system protein InvA

NC_021814
(Salmonella enterica CFSAN001921)

4e-88

250) CFSAN002050_20780
( YP_008262027.1 )

type III secretion system protein InvA

NC_021818
(Salmonella enterica CFSAN002050)

4e-88

251) CFSAN002069_17790
( YP_008252318.1 )

type III secretion system protein InvA

NC_021812
(Salmonella enterica CFSAN002069)

4e-88

252) invA
( NP_457290.1 )

possible secretory protein (associated with virulence)

NC_003198
(Salmonella enterica CT18)

4e-88

253) SeSA_A3049
( YP_002115848.1 )

invasion protein InvA

NC_011094
(Salmonella enterica CVM19633)

4e-88

254) STMMW_28581
( YP_005233885.1 )

secretory protein (associated with virulence)

NC_016854
(Salmonella enterica D23580)

4e-88

255) invA
( NP_461817.1 )

needle complex export protein

NC_003197
(Salmonella enterica LT2)

4e-88

256) STBHUCCB_29420
( YP_005218442.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

4e-88

257) invA
( YP_002244809.1 )

secretory protein

NC_011294
(Salmonella enterica P125109)

4e-88

258) invA
( YP_002638472.1 )

virulence associated secretory protein

NC_012125
(Salmonella enterica RKS4594)

4e-88

259) invA
( YP_005214004.1 )

putative secretory protein (associated with virulence)

NC_016831
(Salmonella enterica RKS5078)

4e-88

260) I137_13790
( YP_008382159.1 )

type III secretion system protein InvA

NC_021984
(Salmonella enterica S06004)

4e-88

261) invA
( YP_217815.1 )

invasion protein

NC_006905
(Salmonella enterica SC-B67)

4e-88

262) SPAB_03599
( YP_001589773.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

4e-88

263) invA
( YP_005182764.1 )

secretory apparatus of type III secretion system

NC_016810
(Salmonella enterica SL1344)

4e-88

264) SNSL254_A3101
( YP_002042137.1 )

invasion protein InvA

NC_011080
(Salmonella enterica SL254)

4e-88

265) SeHA_C3086
( YP_002046856.1 )

invasion protein InvA

NC_011083
(Salmonella enterica SL476)

4e-88

266) SeAg_B3018
( YP_002147793.1 )

invasion protein InvA

NC_011149
(Salmonella enterica SL483)

4e-88

267) inva
( YP_005243877.1 )

Invasion protein invA

NC_016857
(Salmonella enterica ST4/74)

4e-88

268) STMDT12_C29450
( YP_005248641.1 )

invasion protein InvA

NC_016860
(Salmonella enterica T000240)

4e-88

269) invA
( NP_806499.1 )

virulence-associated secretory protein

NC_004631
(Salmonella enterica Ty2)

4e-88

270) TY21A_14135
( YP_007927069.1 )

invasion protein InvA

NC_021176
(Salmonella enterica Ty21a)

4e-88

271) STU288_14635
( YP_007904018.1 )

type III secretion system protein InvA

NC_021151
(Salmonella enterica U288)

4e-88

272) invA
( YP_005253385.1 )

needle complex export protein

NC_016863
(Salmonella enterica UK-1)

4e-88

273) SN31241_39880
( YP_008361903.1 )

Protein mxiA

NC_021902
(Salmonella enterica USMARC-S3124.1)

4e-88

274) SeD_A3206
( YP_002216865.1 )

invasion protein InvA

NC_011205
(Salmonella enterica CT_02021853)

5e-88

275) CFSAN001992_19045
( YP_007473525.1 )

type III secretion system protein InvA

NC_020307
(Salmonella enterica CFSAN001992)

1e-87

276) invA
( NP_902300.1 )

invasion protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

8e-85

277) JCM7686_1766
( YP_008404634.1 )

type III secretion protein SctV

NC_022041
(Paracoccus aminophilus JCM 7686)

4e-82

278) invA
( YP_007030631.1 )

invasion protein

NC_019670
(Pseudomonas sp. UW4)

6e-81

279) Rta_29710
( YP_004620094.1 )

type III secretory apparatus protein PcrD, membrane protein

NC_015677
(Ramlibacter tataouinensis TTB310)

2e-78

280) sctV
( YP_004022629.1 )

type III secretion inner membrane protein SctV

NC_014718
(Burkholderia rhizoxinica HKI 454)

4e-68

• Sequence Alignments

1) A1122_03810 in NC_017168


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score = 1003 bits (3801),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%)

Query  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRLFGAMDGAMKFVKGDAiagiiviliniiggitigVMQHKMSAEEAMNTYAVLSIG  240
            QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPFLIFITLaaavaapaFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480
            SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660
            GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMNLKVAGTIELIGDELDETA  682
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

2) YPC_0742 in NC_017265


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score = 1003 bits (3801),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%)

Query  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRLFGAMDGAMKFVKGDAiagiiviliniiggitigVMQHKMSAEEAMNTYAVLSIG  240
            QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPFLIFITLaaavaapaFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480
            SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660
            GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMNLKVAGTIELIGDELDETA  682
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

3) flhA1 in NC_005810


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score = 1003 bits (3801),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%)

Query  3    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  62
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  63   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  122
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  123  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  182
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  183  QKESRLFGAMDGAMKFVKGDAiagiiviliniiggitigVMQHKMSAEEAMNTYAVLSIG  242
            QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  243  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  302
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  303  GFPFLIFITLaaavaapaFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  362
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  363  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  422
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  423  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  482
            SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  483  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  542
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  543  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  602
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  603  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  662
            GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  663  DEMNLKVAGTIELIGDELDETA  684
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

4) YPO0266 in NC_003143


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score = 1003 bits (3801),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%)

Query  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRLFGAMDGAMKFVKGDAiagiiviliniiggitigVMQHKMSAEEAMNTYAVLSIG  240
            QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPFLIFITLaaavaapaFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480
            SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660
            GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMNLKVAGTIELIGDELDETA  682
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

5) YPD4_0230 in NC_017154


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score = 1003 bits (3801),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%)

Query  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRLFGAMDGAMKFVKGDAiagiiviliniiggitigVMQHKMSAEEAMNTYAVLSIG  240
            QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPFLIFITLaaavaapaFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480
            SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660
            GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMNLKVAGTIELIGDELDETA  682
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

6) YPD8_0235 in NC_017160


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score = 1003 bits (3801),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%)

Query  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRLFGAMDGAMKFVKGDAiagiiviliniiggitigVMQHKMSAEEAMNTYAVLSIG  240
            QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPFLIFITLaaavaapaFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480
            SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660
            GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMNLKVAGTIELIGDELDETA  682
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

7) y0525 in NC_004088


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score = 1003 bits (3801),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%)

Query  3    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  62
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  63   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  122
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  123  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  182
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  183  QKESRLFGAMDGAMKFVKGDAiagiiviliniiggitigVMQHKMSAEEAMNTYAVLSIG  242
            QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  243  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  302
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  303  GFPFLIFITLaaavaapaFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  362
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  363  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  422
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  423  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  482
            SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  483  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  542
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  543  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  602
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  603  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  662
            GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  663  DEMNLKVAGTIELIGDELDETA  684
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

8) YPZ3_0228 in NC_014029


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score = 1003 bits (3801),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%)

Query  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRLFGAMDGAMKFVKGDAiagiiviliniiggitigVMQHKMSAEEAMNTYAVLSIG  240
            QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPFLIFITLaaavaapaFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480
            SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660
            GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMNLKVAGTIELIGDELDETA  682
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

9) YPA_4017 in NC_008150


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  987 bits (3740),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 671/671 (100%), Positives = 671/671 (100%), Gaps = 0/671 (0%)

Query  1    MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  60
            MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMiiftiitvvqfi  120
            PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  180
            VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFVKGDAiagiiviliniiggitigVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  240
            GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLa  300
            ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  aavaapaFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRD  360
            AAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRD
Sbjct  312  AAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRD  371

Query  361  IDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSL  420
            IDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSL
Sbjct  372  IDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSL  431

Query  421  VTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQET  480
            VTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQET
Sbjct  432  VTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQET  491

Query  481  RYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKD  540
            RYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKD
Sbjct  492  RYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKD  551

Query  541  IVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS  600
            IVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS
Sbjct  552  IVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS  611

Query  601  LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  660
            LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI
Sbjct  612  LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

Query  661  ELIGDELDETA  671
            ELIGDELDETA
Sbjct  672  ELIGDELDETA  682

10) YPDSF_3705 in NC_009381


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  987 bits (3740),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 671/671 (100%), Positives = 671/671 (100%), Gaps = 0/671 (0%)

Query  1    MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  60
            MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMiiftiitvvqfi  120
            PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  180
            VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFVKGDAiagiiviliniiggitigVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  240
            GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLa  300
            ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  aavaapaFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRD  360
            AAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRD
Sbjct  312  AAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRD  371

Query  361  IDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSL  420
            IDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSL
Sbjct  372  IDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSL  431

Query  421  VTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQET  480
            VTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQET
Sbjct  432  VTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQET  491

Query  481  RYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKD  540
            RYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKD
Sbjct  492  RYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKD  551

Query  541  IVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS  600
            IVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS
Sbjct  552  IVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS  611

Query  601  LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  660
            LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI
Sbjct  612  LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

Query  661  ELIGDELDETA  671
            ELIGDELDETA
Sbjct  672  ELIGDELDETA  682

11) YPTB0322 in NC_006155


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  974 bits (3690),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 678/682 (99%), Positives = 681/682 (99%), Gaps = 0/682 (0%)

Query  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRLFGAMDGAMKFVKGDAiagiivilvniiggitigvMQHKMSAEEAMNTYAVLSIG  240
            QKESRLFGAMDGAMKFVKGDAIAGIIVIL+NIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPFLIFITLaaavaapaFLLYRKNRRISQDgrangggeegaatgQRMTPGAVPLMLHCA  360
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGG+EEG+ATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  SLLLTRPCSSLVTNNQALGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480
            SLLLTRPCSSLVTNNQ LGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660
            GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMNLKVAGTIELIGDELDETA  682
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

12) YPTS_0346 in NC_010634


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  974 bits (3690),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 678/682 (99%), Positives = 681/682 (99%), Gaps = 0/682 (0%)

Query  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRLFGAMDGAMKFVKGDAiagiivilvniiggitigvMQHKMSAEEAMNTYAVLSIG  240
            QKESRLFGAMDGAMKFVKGDAIAGIIVIL+NIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPFLIFITLaaavaapaFLLYRKNRRISQDgrangggeegaatgQRMTPGAVPLMLHCA  360
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGG+EEG+ATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  SLLLTRPCSSLVTNNQALGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480
            SLLLTRPCSSLVTNNQ LGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660
            GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMNLKVAGTIELIGDELDETA  682
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

13) YpsIP31758_3819 in NC_009708


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  972 bits (3685),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 678/682 (99%), Positives = 682/682 (100%), Gaps = 0/682 (0%)

Query  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRLFGAMDGAMKFVKGDAiagiivilvniiggitigvMQHKMSAEEAMNTYAVLSIG  240
            QKESRLFGAMDGAMKFVKGDAIAGIIVIL+NIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPFLIFITLaaavaapaFLLYRKNRRISQDgrangggeegaatgQRMTPGAVPLMLHCA  360
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGG+EEG+ATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480
            SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GTYSALEERRSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660
            GTYSALEER+SLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMNLKVAGTIELIGDELDETA  682
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

14) YPK_3907 in NC_010465


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  972 bits (3685),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 678/682 (99%), Positives = 682/682 (100%), Gaps = 0/682 (0%)

Query  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60
            MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRLFGAMDGAMKFVKGDAiagiivilvniiggitigvMQHKMSAEEAMNTYAVLSIG  240
            QKESRLFGAMDGAMKFVKGDAIAGIIVIL+NIIGGITIGVMQHKMSAEEAMNTYAVLSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300
            DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPFLIFITLaaavaapaFLLYRKNRRISQDgrangggeegaatgQRMTPGAVPLMLHCA  360
            GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGG+EEG+ATGQRMTPGAVPLMLHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420
            SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480
            SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540
            YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600
            ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GTYSALEERRSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660
            GTYSALEER+SLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMNLKVAGTIELIGDELDETA  682
            DEMNLKVAGTIELIGDELDETA
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

15) YE105_C0332 in NC_015224


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  803 bits (3040),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 558/682 (82%), Positives = 621/682 (92%), Gaps = 3/682 (0%)

Query  1    MRESALTRGLMMIAARQDVFLAVMLLVAIFMMILPLPTVMVDVLIAVNLSFSVILLMISI  60
            M  SAL RGL MI+ARQD+FLAVMLLVA+FMMILPLPT MVD+LIA+NL+FSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGLi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVG+I
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGVIDSAEAGRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAG IDS EA RLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRMFGAMDGAMKFVKGDAiagiivilvniiggitigvLQHNMSAEEAMTTYAVLSVG  240
            QKESR+FGAMDGAMKFVKGDAIAGIIVIL+NIIGGITIGV+QH+MSAEEAM TYAVLS+G
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPDQDKQSLAKDLAIQVGRQPDALLLAAAILTVfallp  300
            DGLCAQIPSLLISITAGIIVTRVP+ +KQSLA++LA+QVGRQPDAL LAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  gfpflifillaalvaTPAFLLYRKKK---PSAGASGRGDKLPSPASAMTPGAVPLMLYCA  357
            GFPFLIFI LAA VA+PAFLLYRK++     + A+G ++   + +  MTPGAVPLML CA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  358  PNLHYPHLGRDLDGLRWRWFEHLGVPLPEVVVRSDPSLAENELSIRVYQEQVLKLTLPFD  417
            +NLH PHLGRD+DGLRWRWFEHLGVPLPEV +R DP+LAEN LS++VYQE+VL + LP D
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  418  DVLLLQPSTSLATRSQVLGMKMGSFEWLPAEQAHHASTLGIPYAQGHQCIIHCLTRVLER  477
             +LL +P +SL T +QVLG KMGSF+WL A QA +A TLGIPY +GHQ II CLTRV+ER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  478  HTAEFIGVQETRYLMDAMEARYGELVKELQRQMPVGKVAETLQRLVEEDISIRDLRTIFG  537
             TAEFIGVQETRYLMDAME+RYGELVKELQRQ+PVGKVAE LQRLVEE+ISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  538  ALVAWAPKEKDIVMLTEYVRIALRRHVCSRFSKNKVWLPVLRLGEGAETLIRESIRQTSA  597
            ALV WAPKEKDIVMLTEYVRIALRRH+C RFS NK W++VLRLG+G E LIR+SIRQTS+
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  598  GTYSALENKHSRLLLDKITGAFAENTDAVLLTSIDVRRFLRKIVERDIFALPVLSWQELG  657
            GTYSALE+++S L+L+KI  AFAEN DAVLLT++DVRRF+RKI+ERD+F LPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  658  DEMNIKVVGTIELIGDELDETT  679
            DEMN+KV GTIELIGDELDET+
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

16) Y11_35391 in NC_017564


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  802 bits (3035),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 557/682 (82%), Positives = 621/682 (92%), Gaps = 3/682 (0%)

Query  1    MRESALTRGLMMIAARQDVFLAVMLLVAIFMMILPLPTVMVDVLIAVNLSFSVILLMISI  60
            M  SAL RGL MI+ARQD+FLAVMLLVA+FMMILPLPT MVD+LIA+NL+FSVILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRDPLEFSVFPSlllittlyrlaltISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGLi  120
            YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVG+I
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  iftiitvvqfivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGVIDSAEAGRLRERV  180
            IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAG IDS EA RLRERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESRMFGAMDGAMKFVKGDAiagiivilvniiggitigvLQHNMSAEEAMTTYAVLSVG  240
            QKESR+FGAMDGAMKFVKGDAIAGIIVIL+NIIGGITIGV+QH+MSAEEAM TYAVLS+G
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLCAQIPSLLISITAGIIVTRVPDQDKQSLAKDLAIQVGRQPDALLLAAAILTVfallp  300
            DGLCAQIPSLLISITAGIIVTRVP+ +KQSLA++LA+QVGRQPDAL LAAAILTVFALLP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  gfpflifillaalvaTPAFLLYRKKK---PSAGASGRGDKLPSPASAMTPGAVPLMLYCA  357
            GFPFLIFI LAA VA+PAFLLYRK++     + A+G ++   + +  MTPGAVPLML CA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  358  PNLHYPHLGRDLDGLRWRWFEHLGVPLPEVVVRSDPSLAENELSIRVYQEQVLKLTLPFD  417
            +NLH PHLGRD+DGLRWRWFEHLGVPLPEV +R DP+LAEN LS++VYQE+VL + LP D
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  418  DVLLLQPSTSLATRSQVLGMKMGSFEWLPAEQAHHASTLGIPYAQGHQCIIHCLTRVLER  477
             +LL +P +SL T +QVLG KMGSF+WL A QA +A TLGIPY +GHQ II CLTRV+ER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  478  HTAEFIGVQETRYLMDAMEARYGELVKELQRQMPVGKVAETLQRLVEEDISIRDLRTIFG  537
             TAEFIGVQETRYLMDAME+RYGELVKELQRQ+PVGKVAE LQRLVEE+ISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  538  ALVAWAPKEKDIVMLTEYVRIALRRHVCSRFSKNKVWLPVLRLGEGAETLIHESIRQTSA  597
            ALV WAPKEKDIVMLTEYVRIALRRH+C RFS NK W++VLRLG+G E LI++SIRQTS+
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  598  GTYSALENKHSRLLLDKITGAFAENTDAVLLTSIDVRRFLRKIVERDIFALPVLSWQELG  657
            GTYSALE+++S L+L+KI  AFAEN DAVLLT++DVRRF+RKI+ERD+F LPVLSWQELG
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  658  DEMNIKVVGTIELIGDELDETT  679
            DEMN+KV GTIELIGDELDET+
Sbjct  661  DEMNLKVAGTIELIGDELDETA  682

17) ssaV in NC_012751


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  730 bits (2763),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 464/680 (69%), Positives = 591/680 (87%), Gaps = 2/680 (0%)

Query  3    MRGDKIKKALALLLERQDIFLAVMLLVAIFMMILPLPTELIDVLIAVNLGLSAILLMISI  62
            M    + ++L+++  RQDIFLAVMLLVA+FMMILPLPT ++D+LIA+NL++S ILLMISI
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  63   YIRDPLEFSVFPSlllittlyrlaltISTSRLVLLQHDAGEIVEAFGQFVVGGNLTVGLI  122
            Y+RDPLEFSVFPSLLLITTLYRLALTIST+RLVLLQHDAGEIVEAFGQFVVGGNL+VG+I
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  123  IFSIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDLRSGSIDSAEAGRQRERV  182
            IF+IITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGD+R+G+IDS EA R RERV
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  183  QKESRLFGAMDGAMKFVKGDaiasiivilvniiggisvgvFQHQMSASEALQTYAVLSVG  242
            QKESRLFGAMDGAMKFVKGDAIA+IIVIL+NIIGGI++GV QH+MSA EA++TYAVLS+G
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  243  DGLASQIPSLLISITAGIVVTRVPGKERKSLANELANQVGRQPEALWMAGGILLVFALIP  302
            DGL +QIPSLLISITAGI+VTRVPG +++SLANELA QVGRQP+ALW+A++IL VFAL+P
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  303  GFPFFVFALLASLVASPAFLVYRKKKKLGQSESM--GLNADGEPQNEMKPGAVPLLLHCA  360
            GFPF++F  LA+ VA+PAFL+YRK+++++Q      G + +G   + M PGAVPL+LHCA
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  361  PNLNRSNLKTEIDSLRLRLFEHLGLPVPEVVVHINQQLEKNGLSISVYQervlelvlaen  420
            +NL++++L  +ID+LR R FEHLG+P+PEV ++ +  L  N LS+ VYQERVLE+VL+ +
Sbjct  361  SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPD  420

Query  421  ellieRPHAELTVRHQNLSRRMGELYWISSDQKSQAISLKITFFEGDERIIQCLNYVFER  480
             LL+ RP + L   +Q L+ +MG + W+ + Q  QA +L I + EG++RII CL  VFER
Sbjct  421  SLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFER  480

Query  481  HSSEFIGVQETRYLMDAMEKNYAELIKELQRQMPVNKISNILQKLVQENISIRDLRTIFG  540
             ++EFIGVQETRYLMDAME  Y+EL+KELQRQ+PV K+++ILQ+LV+ENISIRDLRTIFG
Sbjct  481  YTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFG  540

Query  541  AIVEWAPKEKDNVMLTEYVRIALRRHICQRFSHSKNYLTVFRVGEGLENIIRRSIRQTSA  600
            A+V WAPKEKD VMLTEYVRIALRRH+C+RFSH+K  ++V+R+G+G+E++IR SIRQTS+
Sbjct  541  ALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSS  600

Query  601  GAYSELNAKKSTLILNKIKKSIENKTDILLLTSIDVRHYLRKMIEHDLFSLPVLSFQEIG  660
            G+YS L+ ++S LILNKIK+++ ++ D +LLT++DVR+++RK+IE+DLF LPVLS QE+G
Sbjct  601  GTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  661  DEMPIKVEGMVEFIGEELNE  680
            DEM +KV G +E+IG+EL+E
Sbjct  661  DEMNLKVAGTIELIGDELDE  680

18) Sbal117_2085 in NC_017579


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  614 bits (2320),  Expect = 6e-177, Method: Compositional matrix adjust.
 Identities = 412/675 (62%), Positives = 557/675 (83%), Gaps = 3/675 (0%)

Query  8    LSKAAGRHDIILSAMLMVAVFMMILPLPTPLVDVLIALNLGLSIVLLMIAIYIRDPLEFS  67
            L+  ++R+DI+L+ ML+VAVFMMILPLPT +VD+LIA+NL++S++LLMI+IY+RDPLEFS
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  68   VFPSlllittlyrlaltISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGiiifaiitivq  127
            VFPSLLLITTLYRLALTIST+RL+LLQHDAG+IV +FG+FVVGGNLAVG+IIF+IIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  128  fivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGIIDAKEAKRQRAQVQKESQLYGA  187
            FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAG ID+ EAKR R +VQKES+L+GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  188  MDGAMKFVKGDAIASiiviltniiggiAVGVMQHNMSAAEALNTYAVLSVGDGLIAQIPS  247
            MDGAMKFVKGDAIA+IIVIL NIIGGI++GVMQH+MSA EA+NTYAVLS+GDGL AQIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  248  LLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGT  307
            LLIS+TAG+IVTRVPG ++Q+LANEL +QVGRQP +L +A+ ++ +FAL+PGFP+L+F T
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  308  LGSAVLGASWWLTRQQKRASAQGDESHFTEAGKSEMTNVDNMAPGAVPLILYLGADVPIN  367
            L++AV +++  L R+++R S +G  +  +E G +     + M+PGAVPL+L  ++++   
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGA---TGQRMTPGAVPLMLHCASNLHHP  366

Query  368  GVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGTLGRCDVLLYQEPVLQLQLAPQEVLLID  427
             +   ++ LRW+WFE+LGVPLPE++++     +     V +YQE VL++ L+P+ +LL  
Sbjct  367  HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTR  426

Query  428  PIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVIDRYAGEFI  487
            P +++    + +      ++W+ ++   QA + G++   ++Q     + +V++RY++EFI
Sbjct  427  PCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFI  486

Query  488  GVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWV  547
            GVQETRYLMDAME+RYGELVKELQR ++VGKVAEILQRLVEE IS+RDLRTIF +LV W 
Sbjct  487  GVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWA  546

Query  548  PKEKDIIMLTEYVRIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSAL  607
            PKEKDI+MLTEYVRIALRRH+ R+F+  + WI+VL +G+G+E++IR+SIRQ+++G+YSAL
Sbjct  547  PKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSAL  606

Query  608  DMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRYLRKIVERELFSTPVLSFQELGDDAEIK  667
            +  Q+  IL  I++ ++ +Q  VLLT+LDVRR++RKI+ER+LF  PVLS QELGD+ ++K
Sbjct  607  EERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLK  666

Query  668  VIGQVDLVGDMLDAA  682
            V G ++L+GD LD +
Sbjct  667  VAGTIELIGDELDET  681

19) Sbal_1969 in NC_009052


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  614 bits (2320),  Expect = 6e-177, Method: Compositional matrix adjust.
 Identities = 412/675 (62%), Positives = 557/675 (83%), Gaps = 3/675 (0%)

Query  8    LSKAAGRHDIILSAMLMVAVFMMILPLPTPLVDVLIALNLGLSIVLLMIAIYIRDPLEFS  67
            L+  ++R+DI+L+ ML+VAVFMMILPLPT +VD+LIA+NL++S++LLMI+IY+RDPLEFS
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  68   VFPSlllittlyrlaltISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGiiifaiitivq  127
            VFPSLLLITTLYRLALTIST+RL+LLQHDAG+IV +FG+FVVGGNLAVG+IIF+IIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  128  fivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGIIDAKEAKRQRAQVQKESQLYGA  187
            FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAG ID+ EAKR R +VQKES+L+GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  188  MDGAMKFVKGDAIASiiviltniiggiAVGVMQHNMSAAEALNTYAVLSVGDGLIAQIPS  247
            MDGAMKFVKGDAIA+IIVIL NIIGGI++GVMQH+MSA EA+NTYAVLS+GDGL AQIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  248  LLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGT  307
            LLIS+TAG+IVTRVPG ++Q+LANEL +QVGRQP +L +A+ ++ +FAL+PGFP+L+F T
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  308  LGSAVLGASWWLTRQQKRASAQGDESHFTEAGKSEMTNVDNMAPGAVPLILYLGADVPIN  367
            L++AV +++  L R+++R S +G  +  +E G +     + M+PGAVPL+L  ++++   
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGA---TGQRMTPGAVPLMLHCASNLHHP  366

Query  368  GVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGTLGRCDVLLYQEPVLQLQLAPQEVLLID  427
             +   ++ LRW+WFE+LGVPLPE++++     +     V +YQE VL++ L+P+ +LL  
Sbjct  367  HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTR  426

Query  428  PIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVIDRYAGEFI  487
            P +++    + +      ++W+ ++   QA + G++   ++Q     + +V++RY++EFI
Sbjct  427  PCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFI  486

Query  488  GVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWV  547
            GVQETRYLMDAME+RYGELVKELQR ++VGKVAEILQRLVEE IS+RDLRTIF +LV W 
Sbjct  487  GVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWA  546

Query  548  PKEKDIIMLTEYVRIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSAL  607
            PKEKDI+MLTEYVRIALRRH+ R+F+  + WI+VL +G+G+E++IR+SIRQ+++G+YSAL
Sbjct  547  PKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSAL  606

Query  608  DMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRYLRKIVERELFSTPVLSFQELGDDAEIK  667
            +  Q+  IL  I++ ++ +Q  VLLT+LDVRR++RKI+ER+LF  PVLS QELGD+ ++K
Sbjct  607  EERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLK  666

Query  668  VIGQVDLVGDMLDAA  682
            V G ++L+GD LD +
Sbjct  667  VAGTIELIGDELDET  681

20) Sbal195_2273 in NC_009997


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  612 bits (2312),  Expect = 3e-176, Method: Compositional matrix adjust.
 Identities = 407/675 (61%), Positives = 556/675 (83%), Gaps = 3/675 (0%)

Query  8    LSKAAGRHDIILSAMLMVAVFMMILPLPTPLIDVLIALNLGLSIVLLMIAIYIRDPLEFS  67
            L+  ++R+DI+L+ ML+VAVFMMILPLPT ++D+LIA+NL++S++LLMI+IY+RDPLEFS
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  68   VFPSlllittlyrlaltISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGiiifaiitivq  127
            VFPSLLLITTLYRLALTIST+RL+LLQHDAG+IV +FG+FVVGGNLAVG+IIF+IIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  128  fivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGIIDAKEAKRQRAQVQKESQLYGA  187
            FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAG ID+ EAKR R +VQKES+L+GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  188  MDGAMKFVKGDAIASiiviltniiggiAVGVMQHNMSAAEALNTYAVLSVGDGLIAQIPS  247
            MDGAMKFVKGDAIA+IIVIL NIIGGI++GVMQH+MSA EA+NTYAVLS+GDGL AQIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  248  LLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGT  307
            LLIS+TAG+IVTRVPG ++Q+LANEL +QVGRQP +L +A+ ++ +FAL+PGFP+L+F T
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  308  LGSVVLGASLWLKRQQKRASAQGEESHFTDAGKSDTANVDNMAPGAVPLILYLGADVPIH  367
            L++ V ++++ L R+++R S +G  +   +++  + A  + M+PGAVPL+L  ++++   
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRAN---GGSEEGGATGQRMTPGAVPLMLHCASNLHHP  366

Query  368  GVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGSLGCCDVLLYQESVLQLQLVPQEALLID  427
             +   ++ LRW+WFE+LGVPLPE++++     +     V +YQE VL++ L P+  LL  
Sbjct  367  HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTR  426

Query  428  SIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVIDRYAGEFI  487
            + +++    + +      ++W+ ++   QA + G++   ++Q     + +V++RY++EFI
Sbjct  427  PCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFI  486

Query  488  GVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWV  547
            GVQETRYLMDAME+RYGELVKELQR ++VGKVAEILQRLVEE IS+RDLRTIF +LV W 
Sbjct  487  GVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWA  546

Query  548  PKEKDIIMLTEYVRIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSAL  607
            PKEKDI+MLTEYVRIALRRH+ R+F+  + WI+VL +G+G+E++IR+SIRQ+++G+YSAL
Sbjct  547  PKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSAL  606

Query  608  DMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRYLRKIVERELFSTPVLSFQELGDDAEIK  667
            +  Q+  IL  I++ ++ +Q  VLLT+LDVRR++RKI+ER+LF  PVLS QELGD+ ++K
Sbjct  607  EERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLK  666

Query  668  VIGQVDLVGEVLDAA  682
            V G ++L+G+ LD +
Sbjct  667  VAGTIELIGDELDET  681

21) Sbal678_2283 in NC_016901


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  612 bits (2312),  Expect = 3e-176, Method: Compositional matrix adjust.
 Identities = 407/675 (61%), Positives = 556/675 (83%), Gaps = 3/675 (0%)

Query  8    LSKAAGRHDIILSAMLMVAVFMMILPLPTPLIDVLIALNLGLSIVLLMIAIYIRDPLEFS  67
            L+  ++R+DI+L+ ML+VAVFMMILPLPT ++D+LIA+NL++S++LLMI+IY+RDPLEFS
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  68   VFPSlllittlyrlaltISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGiiifaiitivq  127
            VFPSLLLITTLYRLALTIST+RL+LLQHDAG+IV +FG+FVVGGNLAVG+IIF+IIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  128  fivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGIIDAKEAKRQRAQVQKESQLYGA  187
            FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAG ID+ EAKR R +VQKES+L+GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  188  MDGAMKFVKGDAIASiiviltniiggiAVGVMQHNMSAAEALNTYAVLSVGDGLIAQIPS  247
            MDGAMKFVKGDAIA+IIVIL NIIGGI++GVMQH+MSA EA+NTYAVLS+GDGL AQIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  248  LLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGT  307
            LLIS+TAG+IVTRVPG ++Q+LANEL +QVGRQP +L +A+ ++ +FAL+PGFP+L+F T
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  308  LGSVVLGASLWLKRQQKRASAQGEESHFTDAGKSDTANVDNMAPGAVPLILYLGADVPIH  367
            L++ V ++++ L R+++R S +G  +   +++  + A  + M+PGAVPL+L  ++++   
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRAN---GGSEEGGATGQRMTPGAVPLMLHCASNLHHP  366

Query  368  GVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGSLGCCDVLLYQESVLQLQLVPQEALLID  427
             +   ++ LRW+WFE+LGVPLPE++++     +     V +YQE VL++ L P+  LL  
Sbjct  367  HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTR  426

Query  428  SIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVIDRYAGEFI  487
            + +++    + +      ++W+ ++   QA + G++   ++Q     + +V++RY++EFI
Sbjct  427  PCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFI  486

Query  488  GVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWV  547
            GVQETRYLMDAME+RYGELVKELQR ++VGKVAEILQRLVEE IS+RDLRTIF +LV W 
Sbjct  487  GVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWA  546

Query  548  PKEKDIIMLTEYVRIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSAL  607
            PKEKDI+MLTEYVRIALRRH+ R+F+  + WI+VL +G+G+E++IR+SIRQ+++G+YSAL
Sbjct  547  PKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSAL  606

Query  608  DMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRYLRKIVERELFSTPVLSFQELGDDAEIK  667
            +  Q+  IL  I++ ++ +Q  VLLT+LDVRR++RKI+ER+LF  PVLS QELGD+ ++K
Sbjct  607  EERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLK  666

Query  668  VIGQVDLVGEVLDAA  682
            V G ++L+G+ LD +
Sbjct  667  VAGTIELIGDELDET  681

22) Sbal175_2396 in NC_017571


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  610 bits (2305),  Expect = 1e-175, Method: Compositional matrix adjust.
 Identities = 412/675 (62%), Positives = 557/675 (83%), Gaps = 3/675 (0%)

Query  8    LSKAAGRHDIILSAMLMVAVFMMILPLPTPLVDVLIALNLGLSIVLLMIAIYIRDPLEFS  67
            L+  ++R+DI+L+ ML+VAVFMMILPLPT +VD+LIA+NL++S++LLMI+IY+RDPLEFS
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  68   VFPSlllittlyrlaltISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGiiifaiitivq  127
            VFPSLLLITTLYRLALTIST+RL+LLQHDAG+IV +FG+FVVGGNLAVG+IIF+IIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  128  fivitKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGIIDAKEAKRQRAQVQKESQLYGA  187
            FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAG ID+ EAKR R +VQKES+L+GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  188  MDGAMKFVKGDAIASiiviltniiggiAVGVMQHNMSAAEALNTYAVLSVGDGLIAQIPS  247
            MDGAMKFVKGDAIA+IIVIL NIIGGI++GVMQH+MSA EA+NTYAVLS+GDGL AQIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  248  LLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGT  307
            LLIS+TAG+IVTRVPG ++Q+LANEL +QVGRQP +L +A+ ++ +FAL+PGFP+L+F T
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  308  LGSVVLGASLWLTRQQKRASAQGDESHFTEAGKSEMANVDNMAPGAVPLILYLGADVPIH  367
            L++ V ++++ L R+++R S +G  +  +E G    A  + M+PGAVPL+L  ++++   
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGG---ATGQRMTPGAVPLMLHCASNLHHP  366

Query  368  GVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGTLGRCDVLLYQEPVLQLQLAPQEVLLID  427
             +   ++ LRW+WFE+LGVPLPE++++     +     V +YQE VL++ L+P+ +LL  
Sbjct  367  HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTR  426

Query  428  PIATIPCRVESIPFSNQRLHWIKGNaleqaeaqglalCRDEQIPAYVMGKVIDRYAGEFI  487
            P +++    + +      ++W+ ++   QA + G++   ++Q     + +V++RY++EFI
Sbjct  427  PCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFI  486

Query  488  GVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWV  547
            GVQETRYLMDAME+RYGELVKELQR ++VGKVAEILQRLVEE IS+RDLRTIF +LV W 
Sbjct  487  GVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWA  546

Query  548  PKEKDIIMLTEYVRIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSAL  607
            PKEKDI+MLTEYVRIALRRH+ R+F+  + WI+VL +G+G+E++IR+SIRQ+++G+YSAL
Sbjct  547  PKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSAL  606

Query  608  DMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRYLRKIVERELFSTPVLSFQELGDDAEIK  667
            +  Q+  IL  I++ ++ +Q  VLLT+LDVRR++RKI+ER+LF  PVLS QELGD+ ++K
Sbjct  607  EERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLK  666

Query  668  VIGQVDLVGDMLDAA  682
            V G ++L+GD LD +
Sbjct  667  VAGTIELIGDELDET  681

23) SVI_2235 in NC_014012


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  560 bits (2115),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 398/677 (59%), Positives = 544/677 (81%), Gaps = 7/677 (1%)

Query  8    LNIAGGRLDIILSAMLMVAVFMMILPLPTALIDLLIAFNLCLSILLLMIAIYIRDPLEFS  67
            L +  +R DI+L+ ML+VAVFMMILPLPT+++DLLIA+NL +S++LLMI+IY+RDPLEFS
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  68   VFPSlllittlyrlaltVSTSRLILLQHDAGEIVYTFGKFVVGGNLAVGiiiftiitivq  127
            VFPSLLLITTLYRLALT+ST+RL+LLQHDAGEIV +FG+FVVGGNLAVG+IIFTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  128  fivitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGIIDAQEAKRQRTQVQKESQLYGA  187
            FIVITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID+ EAKR R +VQKES+L+GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  188  MDGAMKFVKGDaiasiivilaniiggiavgvMQHGMSASEAVNTYAILSVGDGLISQIPA  247
            MDGAMKFVKGDAIA+IIVIL NIIGGI++GVMQH MSA EA+NTYA+LS+GDGL +QIP+
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  248  LLISLTAGLIVTRVPGEKRQNLANELVSQMGRQPSSLQMAGIMMFVFAIIPGFPLItfgf  307
            LLIS+TAG+IVTRVPG ++Q+LANEL  Q+GRQP +L +A+ ++ VFA++PGFP++ F  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  308  lgsltfgfsWWLIRKKKIAEEQGSPHFSDTSASGEVDADGNMSPGAIPVML-CLGEDVSI  366
            L++   + +  L RK++   ++G    ++ ++     ++  M+PGA+P+ML C + ++  
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGR---ANGGSEEGGATGQRMTPGAVPLMLHC-ASNLHH  365

Query  367  TGVKEALQKLRWQLFEELGVPLPEIQLQVIKNGRKGQFDvllyqevvlqlqIDPEESLLV  426
              +   ++ LRW+ FE+LGVPLPE++++         + V +YQE VL++ + P+  LL 
Sbjct  366  PHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLT  425

Query  427  DQNVTLLSRVESLNFNGEELHWIKGNVVEQALEQGLP-VLSKETIPAYLVGKVIRRYAGE  485
                +L++  + L  +   ++W+ ++   QA   G+P V + + I + L  +V+ RY++E
Sbjct  426  RPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCL-TRVFERYTAE  484

Query  486  FIGVQETRYLMDAIEVKYGELVKELQRVLSVGKVADILQRLVDEGIAIRDLRTIFETLVE  545
            FIGVQETRYLMDA+E +YGELVKELQR ++VGKVA+ILQRLV+E I+IRDLRTIF +LV 
Sbjct  485  FIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVV  544

Query  546  WVAKEKDVIMLTEYVRIALRRHIRRKFVSPQGWISVLMVGDGIENLIRESIRQSTAGSYS  605
            W +KEKD++MLTEYVRIALRRH+ R+F   + WISVL +GDG+E+LIR+SIRQ+++G+YS
Sbjct  545  WAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYS  604

Query  606  ALDLEQSNLILTAVVQQLPAQQSCVLLTSLDVRRYLRKIVEKELFMTPVLSFQELGDDAE  665
            AL+  QS LIL  + + ++ +Q  VLLT+LDVRR++RKI+E++LF+ PVLS QELGD+ +
Sbjct  605  ALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMN  664

Query  666  IKVMAHVDLVGESLDAA  682
            +KV + ++L+G+ LD +
Sbjct  665  LKVAGTIELIGDELDET  681

24) escV in NC_005085


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  539 bits (2035),  Expect = 2e-154, Method: Compositional matrix adjust.
 Identities = 386/675 (58%), Positives = 541/675 (81%), Gaps = 8/675 (1%)

Query  8    LMMAAGRQDivlavmllvavfmmiiPLPTGLVDFMIALNLMIAVILLMMSLYIREPLEFS  67
            L M ++RQDI LAVMLLVAVFMMI+PLPT +VD++IA+NL ++VILLM+S+Y+R+PLEFS
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  68   AFPSVLLITTLYRLALTISTTRLILLQADAGEIVYTFGSFAVGGNLGVGLivfviitvvq  127
             FPS+LLITTLYRLALTISTTRL+LLQ DAGEIV +FG F VGGNL+VG+I+F IITVVQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  128  fivitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDANEARRLRGLVQKESQLYGA  187
            FIVITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID+ EA+RLR  VQKES+L+GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  188  MDGAMKFVKgdaiagiiiilvnilggTAIGVMMHGMSASAALSTYAILSIGDGLIGQIPA  247
            MDGAMKFVKGDAIAGII+IL+NI+GG +IGVM H MSA  A++TYA+LSIGDGL +QIP+
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  248  LLISITAGTIVTRVPGEQRLNLASDLTDQIGKQPQalllaasvllvfalIPGFPAIYFII  307
            LLISITAG IVTRVPG ++ +LA++L+ Q+G+QP+AL LAA++L VFAL+PGFP   F+I
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP---FLI  306

Query  308  LAAMvsaaawwvkkrkraarsdstgspssesGADAGGETANMSPGATPLMMRLSPDLIRS  367
            + ++ +A A       R  R  S ++ ++ ++ ++G+    M+PGA PLM++ +++L + 
Sbjct  307  FITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNL-HH  365

Query  368  SRLPALLDTFRHGKFEQLGIPLPEIQLQKDASLAAGTLQILLYQEPVLTVSLPERLLLAD  427
            ++L   +D +R   FE+LG+PLPE++++ D++LA  TL + +YQE VL V LP   LL  
Sbjct  366  PHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLT  425

Query  428  IASPKLPQSEQTDKLPFGNLSLQWQSPTQKEALSAIGVQLHQDEDRIVHCLSIIIDRYAA  487
             + + L  ++Q      G  S++W  + Q     ++G+   ++++RI+ CL+ +++RY+A
Sbjct  426  RPCSSLVTNNQVLGAKMG--SFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTA  483

Query  488  EFVGVQETRFLMDAMESKYAELIKEVQRQLPIGRIADVLQRLVAEGVSIRDLRSVFEALI  547
            EF+GVQETR+LMDAME++Y+EL+KE+QRQ+P+G++A++LQRLV E +SIRDLR++F AL+
Sbjct  484  EFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALV  543

Query  548  EWAPREKDPVMLLEYVRMGLRRHIVTRYRAGQPWISGWMIGDTIEGMVREAIRQTSAGSY  607
             WAP+EKD VML EYVR++LRRH+  R+   + WIS   +GD +E ++R++IRQTS+G+Y
Sbjct  544  VWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTY  603

Query  608  SALDPEHNQAIMSCIREAVGDAEKRNQVLITAIDVRRFLRKVVEREFFNLHVLSFQEIGE  667
            SAL+  ++  I++ I++A   AE+++ VL+T++DVRRF+RK++ER++F L VLS QE+G+
Sbjct  604  SALEERQSLLILNKIKNAF--AENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGD  661

Query  668  EAELRVVGNIDLIGE  682
            E +L+V G I+LIG+
Sbjct  662  EMNLKVAGTIELIGD  676

25) NT01EI_0958 in NC_012779


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  532 bits (2009),  Expect = 2e-152, Method: Compositional matrix adjust.
 Identities = 359/635 (57%), Positives = 496/635 (79%), Gaps = 6/635 (0%)

Query  46   NLTLSITLLMMAVYIREPMEFSAFPSVLLITTLYRLALTISTSRLILLQHDAGEIVYTFG  105
            NL++S+ LLM+++Y+R+P+EFS FPS+LLITTLYRLALTIST+RL+LLQHDAGEIV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  106  NFAVGGNLAVGLIVFAIITVVQFIVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGI  165
            +F VGGNLAVG+I+F+IITVVQFIVITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  166  IDATEARRQRALVQKESQLYGAMDGAMKFVKGDAIASiivilvnivggicvgvFMHEMSA  225
            ID+ EA+R R  VQKES+L+GAMDGAMKFVKGDAIA+IIVIL+NI+GGI +GV  H MSA
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  226  GDAAATYAILSVGDGLIAQIPALLISIAAGIIVTRVPGENRRNLASELTEQILRQRQalw  285
             +A  TYA+LS+GDGL AQIP+LLISI+AGIIVTRVPG N+++LA+EL+ Q+ RQ +ALW
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  286  ivaavlalfaalPGFPTLIFLSLGAGLAAIAYSLRRKEQQhsphtashsaasRDESGQEG  345
            + AA+L++FA LPGFP LIF++L+A++AA A+ L RK+++ S +  +++++  +E+G  G
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGS--EEGGATG  345

Query  346  APLLIGATplalrlpdalardpSLTQALATLRAEKLEQAGLPLPEIQIQTDNGFGPDQFA  405
              +  GA    +    +  ++P L + +  LR   +E+ G+PLPE++I+ D  ++ + ++
Sbjct  346  QRMTPGAV-PLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLS  404

Query  406  LLLYQEPVLAITLPHLALLDITAPPLRQADHRETLPFGGITLQWLSLEQAESSATIGVNS  465
            + +YQE VL + LP  +LL +T P      + + L     +++WL   QA  + T+G+  
Sbjct  405  VQVYQERVLEVVLPPDSLL-LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  466  YQGNARIAYLVSLALDRYGAEFIGVQEARYLMDQMEQRYGELVKELQRQLPVARIADVLQ  525
             +G+ RI   ++  ++RY AEFIGVQE+RYLMD ME RYGELVKELQRQ+PV+++A++LQ
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  526  RLVAESVSIRDLRSIFEALVEWAPREKDPVMLAEYARLALRRHIVGRQRHGQPWVKAWLI  585
            RLV E++SIRDLR+IF ALV WAP+EKD VML+EY R+ALRRH+  R  H + W+    +
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  586  GSHIEQMMRESIRQTSAGSYSALSPQENQAILAEIHAALERSGGANTAIVTAIDIRRFIR  645
            G  +E+++R+SIRQTS+G+YSAL  +++  IL  I  A+  +   ++ ++T++D+RRF+R
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF--AENQDAVLLTTLDVRRFVR  641

Query  646  KLIERELFTTPVLSFQELDDEAELKVLGHIELIGD  680
            K+IER+LF  PVLS QEL+DE +LKV G IELIGD
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGD  676

26) esaV in NC_013508


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  512 bits (1930),  Expect = 4e-146, Method: Compositional matrix adjust.
 Identities = 361/635 (57%), Positives = 496/635 (79%), Gaps = 6/635 (0%)

Query  46   NLTLSITLLMMAVYIREPMEFSAFPSVLLITTLYRLALTISTSRLILLQHDAGEIVYTFG  105
            NL++S+ LLM+++Y+R+P+EFS FPS+LLITTLYRLALTIST+RL+LLQHDAGEIV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  106  NFAVGGNLAVGLIVFAIITVVQFIVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGI  165
            +F VGGNLAVG+I+F+IITVVQFIVITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  166  IDATEARRQRALVQKESQLYGAMDGAMKFVKGDAIASiivilvnivggicvgvFMHEMSA  225
            ID+ EA+R R  VQKES+L+GAMDGAMKFVKGDAIA+IIVIL+NI+GGI +GV  H MSA
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  226  GDAAATYAILSVGDGLIAQIPALLISIAAGIIVTRVPGENRRNLASELTEQILRQRQalw  285
             +A  TYA+LS+GDGL AQIP+LLISI+AGIIVTRVPG N+++LA+EL+ Q+ RQ +ALW
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  286  ivaavlalfaalPGFPTlifiglgaglaaiaYSLRRKERQRSPLAAGHSASDHDESGQEG  345
            + AA+L++FA LPGFP LIFI L+A++AA A+ L RK+R+ S    G++ ++ +E+G  G
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQ--DGRANGGSEEGGATG  345

Query  346  APLLIGATplalrlpdalardpTLAQALATLRAEKLELAGLPLPEIQIQPDSSLGPDQFT  405
              +  GA PL L+ +  L +   L++ +  LR   +E  G+PLPE++I+ D++L+ + ++
Sbjct  346  QRMTPGAVPLMLHCASNLHHPH-LGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLS  404

Query  406  LLLYQEPVLSMtlphlalldlaaptlRQVDHRETLPFGGITLQWIAQEQAEGSAAIGVNR  465
            + +YQE VL + +     L L+ P    V + + L     +++W+   QA  + ++G+  
Sbjct  405  VQVYQERVLEV-VLPPDSLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  466  YQGNARIAYLVSLALDRYGAEFIGVQEARYLMDQMEQRYGELVKELQRQLPVARVADVLQ  525
             +G+ RI   ++  ++RY AEFIGVQE+RYLMD ME RYGELVKELQRQ+PV++VA++LQ
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  526  RLVAESVSIRDLRAIFEALVEWAPREKDPVMLAEYARLALRRHIIGRQRHGQPWVKAWLI  585
            RLV E++SIRDLR+IF ALV WAP+EKD VML+EY R+ALRRH+  R  H + W+    +
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  586  GSHIEQKVRESVRQTSAGSYSALSQQENQAILTEIHAALERSGAVNTAIVTAIDIRRFIR  645
            G  +E+ +R+S+RQTS+G+YSAL ++++  IL  I  A+  +   ++ ++T++D+RRF+R
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF--AENQDAVLLTTLDVRRFVR  641

Query  646  KLIERELFTTAVLSFQELDDEAELKVLGHIELIGD  680
            K+IER+LF  +VLS QEL+DE +LKV G IELIGD
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGD  676

27) esaV in NC_017309


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  512 bits (1930),  Expect = 4e-146, Method: Compositional matrix adjust.
 Identities = 361/635 (57%), Positives = 496/635 (79%), Gaps = 6/635 (0%)

Query  46   NLTLSITLLMMAVYIREPMEFSAFPSVLLITTLYRLALTISTSRLILLQHDAGEIVYTFG  105
            NL++S+ LLM+++Y+R+P+EFS FPS+LLITTLYRLALTIST+RL+LLQHDAGEIV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  106  NFAVGGNLAVGLIVFAIITVVQFIVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGI  165
            +F VGGNLAVG+I+F+IITVVQFIVITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  166  IDATEARRQRALVQKESQLYGAMDGAMKFVKGDAIASiivilvnivggicvgvFMHEMSA  225
            ID+ EA+R R  VQKES+L+GAMDGAMKFVKGDAIA+IIVIL+NI+GGI +GV  H MSA
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  226  GDAAATYAILSVGDGLIAQIPALLISIAAGIIVTRVPGENRRNLASELTEQILRQRQalw  285
             +A  TYA+LS+GDGL AQIP+LLISI+AGIIVTRVPG N+++LA+EL+ Q+ RQ +ALW
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  286  ivaavlalfaalPGFPTlifiglgaglaaiaYSLRRKERQRSPLAAGHSASDHDESGQEG  345
            + AA+L++FA LPGFP LIFI L+A++AA A+ L RK+R+ S    G++ ++ +E+G  G
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQ--DGRANGGSEEGGATG  345

Query  346  APLLIGATplalrlpdalardpTLAQALATLRAEKLELAGLPLPEIQIQPDSSLGPDQFT  405
              +  GA PL L+ +  L +   L++ +  LR   +E  G+PLPE++I+ D++L+ + ++
Sbjct  346  QRMTPGAVPLMLHCASNLHHPH-LGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLS  404

Query  406  LLLYQEPVLSMtlphlalldlaaptlRQVDHRETLPFGGITLQWIAQEQAEGSAAIGVNR  465
            + +YQE VL + +     L L+ P    V + + L     +++W+   QA  + ++G+  
Sbjct  405  VQVYQERVLEV-VLPPDSLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  466  YQGNARIAYLVSLALDRYGAEFIGVQEARYLMDQMEQRYGELVKELQRQLPVARVADVLQ  525
             +G+ RI   ++  ++RY AEFIGVQE+RYLMD ME RYGELVKELQRQ+PV++VA++LQ
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  526  RLVAESVSIRDLRAIFEALVEWAPREKDPVMLAEYARLALRRHIIGRQRHGQPWVKAWLI  585
            RLV E++SIRDLR+IF ALV WAP+EKD VML+EY R+ALRRH+  R  H + W+    +
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  586  GSHIEQKVRESVRQTSAGSYSALSQQENQAILTEIHAALERSGAVNTAIVTAIDIRRFIR  645
            G  +E+ +R+S+RQTS+G+YSAL ++++  IL  I  A+  +   ++ ++T++D+RRF+R
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF--AENQDAVLLTTLDVRRFVR  641

Query  646  KLIERELFTTAVLSFQELDDEAELKVLGHIELIGD  680
            K+IER+LF  +VLS QEL+DE +LKV G IELIGD
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGD  676

28) ETAC_04215 in NC_020796


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  511 bits (1928),  Expect = 6e-146, Method: Compositional matrix adjust.
 Identities = 361/635 (57%), Positives = 495/635 (78%), Gaps = 6/635 (0%)

Query  46   NLTLSITLLMMAVYIREPMEFSAFPSVLLITTLYRLALTISTSRLILLQHDAGEIVYTFG  105
            NL++S+ LLM+++Y+R+P+EFS FPS+LLITTLYRLALTIST+RL+LLQHDAGEIV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  106  NFAVGGNLAVGLIVFAIITVVQFIVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGI  165
            +F VGGNLAVG+I+F+IITVVQFIVITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  166  IDATEARRQRALVQKESQLYGAMDGAMKFVKGDAIASiivilvnivggicvgvFMHEMSA  225
            ID+ EA+R R  VQKES+L+GAMDGAMKFVKGDAIA+IIVIL+NI+GGI +GV  H MSA
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  226  GDAAATYAILSVGDGLIAQIPALLISIAAGIIVTRVPGENRRNLASELTEQILRQRQalw  285
             +A  TYA+LS+GDGL AQIP+LLISI+AGIIVTRVPG N+++LA+EL+ Q+ RQ +ALW
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  286  ivaavlalfaalPGFPTlifiglgaglaaiaYSLRRKERQRSPLAAGHSASDHDESGQEG  345
            + AA+L++FA LPGFP LIFI L+A++AA A+ L RK+R+ S    G++ ++ +E+G  G
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQ--DGRANGGSEEGGATG  345

Query  346  APLLIGATplalrlpdalardpTLAQALATLRAEKLELAGLPLPEIQIQPDSGLGPDQFT  405
              +  GA PL L+ +  L +   L++ +  LR   +E  G+PLPE++I+ D+ L+ + ++
Sbjct  346  QRMTPGAVPLMLHCASNLHHPH-LGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLS  404

Query  406  LLLYQEPVLSMtlphlalldlaaptlRQVDHRETLPFGGITLQWIAQEQAEGSAAIGVNR  465
            + +YQE VL + +     L L+ P    V + + L     +++W+   QA  + ++G+  
Sbjct  405  VQVYQERVLEV-VLPPDSLLLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  466  YQGNARIAYLVSLALDRYGAEFIGVQEARYLMDQMEQRYGELVKELQRQLPVARVADVLQ  525
             +G+ RI   ++  ++RY AEFIGVQE+RYLMD ME RYGELVKELQRQ+PV++VA++LQ
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  526  RLVAESVSIRDLRAIFEALVEWAPREKDPVMLAEYARLALRRHIIGRQRHGQPWVKAWLI  585
            RLV E++SIRDLR+IF ALV WAP+EKD VML+EY R+ALRRH+  R  H + W+    +
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  586  GSHIEQKVRESVRQTSAGSYSALSQQENQAILTEIHAALERSGAVNTAIVTAIDIRRFIR  645
            G  +E+ +R+S+RQTS+G+YSAL ++++  IL  I  A+  +   ++ ++T++D+RRF+R
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF--AENQDAVLLTTLDVRRFVR  641

Query  646  KLIERELFTTAVLSFQELDDEAELKVLGHIELIGD  680
            K+IER+LF  +VLS QEL+DE +LKV G IELIGD
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGD  676

29) ssaV in NC_016857


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  486 bits (1834),  Expect = 2e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  41   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  100
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  101  VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  160
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  161  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  220
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  221  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  280
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  281  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  340
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  341  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  393
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  394  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  452
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  453  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  512
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  513  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  572
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  573  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  632
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  633  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  692
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  693  ESIDLSEEELADNE  706
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

30) ssaV in NC_006905


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1829),  Expect = 4e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

31) CFSAN002050_13465 in NC_021818


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1829),  Expect = 4e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKEMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSTKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

32) SSPA1337 in NC_011147


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1829),  Expect = 4e-138, Method: Compositional matrix adjust.
 Identities = 390/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitfaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ F  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

33) ssaV in NC_006511


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1829),  Expect = 4e-138, Method: Compositional matrix adjust.
 Identities = 390/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitfaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ F  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

34) SeSA_A1510 in NC_011094


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1829),  Expect = 4e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

35) SE451236_12935 in NC_021820


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

36) SeAg_B1759 in NC_011149


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 388/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCILLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  ++ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSTKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

37) SEEB0189_12465 in NC_021844


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

38) SBOV14111 in NC_022241


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

39) SeD_A1929 in NC_011205


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

40) ssaV in NC_011294


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

41) SEEH1578_16305 in NC_021810


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

42) SU5_02030 in NC_017623


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

43) CFSAN002069_01930 in NC_021812


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

44) SeHA_C1547 in NC_011083


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

45) SNSL254_A1525 in NC_011080


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

46) SPAB_01911 in NC_010102


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

47) ssaV in NC_016856


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

48) STMMW_14191 in NC_016854


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

49) ssaV in NC_003197


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

50) ssaV in NC_016810


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

51) STMDT12_C14300 in NC_016860


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

52) STU288_03390 in NC_021151


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

53) ssaV in NC_016863


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

54) CFSAN001921_10075 in NC_021814


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1828),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

55) CFSAN001992_04520 in NC_020307


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  485 bits (1827),  Expect = 6e-138, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 539/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARALRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

56) ssaV in NC_011274


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  484 bits (1824),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 538/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTVMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT  GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

57) ssaV in NC_022221


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  484 bits (1824),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 538/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTVMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT  GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

58) ssaV in NC_016831


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  484 bits (1824),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 538/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTVMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT  GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

59) I137_05675 in NC_021984


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  484 bits (1824),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 538/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTVMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT  GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

60) SN31241_24840 in NC_021902


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  481 bits (1814),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 385/663 (59%), Positives = 530/663 (80%), Gaps = 9/663 (1%)

Query  3    LATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLSVFPslllittl  62
            LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++SVFPSLLLITTL
Sbjct  21   LAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTL  80

Query  63   yrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivqfivitKGIERV  122
            YRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQFIVITKG ERV
Sbjct  81   YRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERV  140

Query  123  AEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGAMDGAMKFVKGD  182
            AEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GAMDGAMKFVKGD
Sbjct  141  AEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGD  200

Query  183  TiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPSLLISLSAGIIV  242
            +IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPSLLIS++AGIIV
Sbjct  201  AIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIV  260

Query  243  TRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaffsallalpiil  302
            TRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  ++A +A P +L
Sbjct  261  TRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFL  320

Query  303  iRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLIRDIDAMRWFLF  355
            + RK+  +S +G      +        M PGA PL+L+ ++ LH ++L RDID++RW  F
Sbjct  321  LYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWF  380

Query  356  EDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGADASVVGDSQTLP  414
            E+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + +S+V ++Q L 
Sbjct  381  EHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPCSSLVTNNQVLG  439

Query  415  NGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGVQETRYLMNAME  474
              MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGVQETRYLM+AME
Sbjct  440  AKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAME  499

Query  475  KNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPREKDVLMLTEYV  534
              Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+EKD++MLTEYV
Sbjct  500  GRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYV  559

Query  535  rialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSSRHKTQILQLIE  594
            RIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  R+   IL+ I 
Sbjct  560  RIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIK  619

Query  595  QALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVVESIDLSEEELA  654
            +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V  +I+L  +EL 
Sbjct  620  NAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGDELD  679

Query  655  DNE  657
            +  
Sbjct  680  ETA  682

61) ssaV in NC_012125


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  481 bits (1814),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 385/663 (59%), Positives = 530/663 (80%), Gaps = 9/663 (1%)

Query  3    LATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLSVFPslllittl  62
            LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++SVFPSLLLITTL
Sbjct  21   LAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTL  80

Query  63   yrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivqfivitKGIERV  122
            YRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQFIVITKG ERV
Sbjct  81   YRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERV  140

Query  123  AEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGAMDGAMKFVKGD  182
            AEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GAMDGAMKFVKGD
Sbjct  141  AEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGD  200

Query  183  TiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPSLLISLSAGIIV  242
            +IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPSLLIS++AGIIV
Sbjct  201  AIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIV  260

Query  243  TRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaffsallalpiil  302
            TRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  ++A +A P +L
Sbjct  261  TRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFL  320

Query  303  iRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLTPTLHSADLIRDIDAMRWFLF  355
            + RK+  +S +G      +        M PGA PL+L+ ++ LH ++L RDID++RW  F
Sbjct  321  LYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWF  380

Query  356  EDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGADASVVGDSQTLP  414
            E+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + +S+V ++Q L 
Sbjct  381  EHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPCSSLVTNNQVLG  439

Query  415  NGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGVQETRYLMNAME  474
              MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGVQETRYLM+AME
Sbjct  440  AKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAME  499

Query  475  KNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPREKDVLMLTEYV  534
              Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+EKD++MLTEYV
Sbjct  500  GRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYV  559

Query  535  rialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSSRHKTQILQLIE  594
            RIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  R+   IL+ I 
Sbjct  560  RIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIK  619

Query  595  QALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVVESIDLSEEELA  654
            +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V  +I+L  +EL 
Sbjct  620  NAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGDELD  679

Query  655  DNE  657
            +  
Sbjct  680  ETA  682

62) ssaV in NC_017046


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  481 bits (1814),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 385/663 (59%), Positives = 530/663 (80%), Gaps = 9/663 (1%)

Query  3    LATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLSVFPslllittl  62
            LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++SVFPSLLLITTL
Sbjct  21   LAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTL  80

Query  63   yrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivqfivitKGIERV  122
            YRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQFIVITKG ERV
Sbjct  81   YRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERV  140

Query  123  AEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGAMDGAMKFVKGD  182
            AEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GAMDGAMKFVKGD
Sbjct  141  AEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGD  200

Query  183  TiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPSLLISLSAGIIV  242
            +IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPSLLIS++AGIIV
Sbjct  201  AIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIV  260

Query  243  TRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaffsallalpiil  302
            TRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  ++A +A P +L
Sbjct  261  TRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFL  320

Query  303  iRRKKSVVSANGVEAPEKDS-------MVPGACPLILRLSPTLHSADLIRDIDAMRWFLF  355
            + RK+  +S +G      +        M PGA PL+L+ ++ LH ++L RDID++RW  F
Sbjct  321  LYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWF  380

Query  356  EDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGADASVVGDSQTLP  414
            E+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + +S+V ++Q L 
Sbjct  381  EHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPCSSLVTNNQVLG  439

Query  415  NGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGVQETRYLMNAME  474
              MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGVQETRYLM+AME
Sbjct  440  AKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAME  499

Query  475  KNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPREKDVLMLTEYV  534
              Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+EKD++MLTEYV
Sbjct  500  GRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYV  559

Query  535  rialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSSRHKTQILQLIE  594
            RIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  R+   IL+ I 
Sbjct  560  RIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIK  619

Query  595  QALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVVESIDLSEEELA  654
            +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V  +I+L  +EL 
Sbjct  620  NAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGDELD  679

Query  655  DNE  657
            +  
Sbjct  680  ETA  682

63) SG1300 in NC_007712


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  477 bits (1797),  Expect = 1e-135, Method: Compositional matrix adjust.
 Identities = 370/644 (58%), Positives = 508/644 (79%), Gaps = 5/644 (0%)

Query  45   VVDILIAINITFSVILLLIAIYINDPLDLSVFPSlllittlyrlsltisttrlvllQHNA  104
            +VD+LIAIN++FSVILL+I+IY+ DPL++SVFPSLLLITTLYRL+LTISTTRLVLLQH+A
Sbjct  40   MVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDA  99

Query  105  GSIVDAFGRFVVGGNLTVGLviffiitivqfivitKGTERVAEVSARFSLDGMPGKQMSI  164
            G IV+AFG+FVVGGNL+VG++IF IIT+VQFIVITKG+ERVAEVSARFSLDGMPGKQMSI
Sbjct  100  GEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSI  159

Query  165  DGDLRAGVIDavqarqqrqlvqqESRFLGAMDGAMKFVKGDAiagiivvlvniiggiiig  224
            DGD+RAG ID+V+A++ R+ VQ+ESR++GAMDGAMKFVKGDAIAGIIV+L+NIIGGI IG
Sbjct  160  DGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIG  219

Query  225  ivqggmsigQAMQTYSVLSIGDGLCGQIPSLLISLSAGIIVTRVPGEKRQNLAGEVSTQL  284
            ++Q  MS  +AM+TY+VLSIGDGLC+QIPSLLIS++AGIIVTRVPG ++Q+LA E++ Q+
Sbjct  220  VMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQV  279

Query  285  GKQPQALMLTAVILLLFALIPGFPFIDffllallsalPCGLIWHRLRRAS----GVGPAA  340
            G+QP+AL L+A IL +FAL+PGFPF+ F+ LA   A P  L+ ++ RR S    + G + 
Sbjct  280  GRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSE  339

Query  341  QTESTDDVMRPGACPLMLRISPSLNTASLTQEIDALRWSLFESYGVPLPEITVMVEPAQQ  400
            +  +T++ M PGA PLML+ +++L+ + L ++ID+LRW  FE  GVPLPE+ +  +P+  
Sbjct  340  EGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLA  399

Query  401  APAMTLLLYQEPVFSQVLPDKGFCLAFGVADDLGGERVTLPDGMGQITWLPAERAALARD  460
              ++++ +YQE V+  VLP  ++ L+      L  +   L   MG + WL A +A  AR 
Sbjct  400  ENTLSVQVYQERVLEVVLPPDSLLLT-RPCSSLVTNNQVLGAKMGSFDWLDAKQAMQART  458

Query  461  RGLTVIAQKNCLSALLRRVLVRYMAEFIGVQEARYLMDAMEAHYAELVKELQRQLPISKI  520
             G+  +   + + + L RV+ RY AEFIGVQE+RYLMDAME++Y+ELVKELQRQ+P++K+
Sbjct  459  LGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKV  518

Query  521  TETLQRLVAEGVSIRDLRLIFGTLIEWAPREKDVLMLTEYVRIALRRHLLQRLKPLGDPL  580
            +E LQRLV E +SIRDLR IFG+L+ WAP+EKD++MLTEYVRIALRRHL +R+      +
Sbjct  519  AEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWI  578

Query  581  PVVRIGEGIENLIRESIRQTAVGTYAALSPAQNQRILTLIAEALAPLGEVCVVTSVDARR  640
            +V+R+G+G+E+LIR+SIRQT+ GTY+AL   Q+  IL  I +A+A   +  ++T++D RR
Sbjct  579  SVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRR  638

Query  641  FLRRLIETLRHDIAVMSWQELGAECAIQVLATLDLGTEELADDD  684
            F+R++IE     ++V+SWQELG E  ++V +T++L  +EL +  
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGDELDETA  682

64) ssaV in NC_003198


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  472 bits (1780),  Expect = 3e-134, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 538/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSvillliviYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGIEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLSKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

65) STBHUCCB_13720 in NC_016832


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  472 bits (1780),  Expect = 3e-134, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 538/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSvillliviYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGIEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLSKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

66) TY21A_06515 in NC_021176


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  472 bits (1780),  Expect = 3e-134, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 538/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSvillliviYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGIEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLSKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

67) ssaV in NC_004631


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  472 bits (1780),  Expect = 3e-134, Method: Compositional matrix adjust.
 Identities = 389/674 (58%), Positives = 538/674 (80%), Gaps = 9/674 (1%)

Query  15   LSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSvillliviYLSDPLDLS  74
            L++ ++RQD+ LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I IYL DPL++S
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  75   VFPslllittlyrlsltistsrlvllQHNAGNIVDAFGKfvvggnltvglvvftiitivq  134
            VFPSLLLITTLYRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  135  fivitKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGA  194
            FIVITKG ERVAEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GA
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  195  MDGAMKFVKGDTiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPS  254
            MDGAMKFVKGD+IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPS
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  255  LLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPfitlaf  314
            LLIS++AGIIVTRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++AL+PGFPF+ +  
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  315  fsallalpiiliRRKKSVVSANGIEAPEKDS-------MVPGACPLILRLTPTLHSADLI  367
            ++A +A P +L+ RK+  +S +G      +        M PGA PL+L+ ++ LH ++L 
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLG  369

Query  368  RDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPAQADYLLIGAD  426
            RDID++RW  FE+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P+++  LL  + 
Sbjct  370  RDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPC  428

Query  427  ASVVGDSQTLPNGMGQICWLSKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGV  486
            +S+V ++Q L   MG + WL    A +A+ +G+    G QRI + L  V+ R  +EFIGV
Sbjct  429  SSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGV  488

Query  487  QETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPR  546
            QETRYLM+AME  Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+
Sbjct  489  QETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPK  548

Query  547  EKDVLMLTEYVrialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSS  606
            EKD++MLTEYVRIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  
Sbjct  549  EKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE  608

Query  607  RHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVV  666
            R+   IL+ I +A+ ++    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V 
Sbjct  609  RQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVA  668

Query  667  ESIDLSEEELADNE  680
             +I+L  +EL +  
Sbjct  669  GTIELIGDELDETA  682

68) SARI_01568 in NC_010067


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  464 bits (1748),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 383/663 (58%), Positives = 527/663 (80%), Gaps = 9/663 (1%)

Query  3    LATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLSVFPslllittl  62
            LA +LL+A+ MM+LPLPT MVD+LI+INL FSVILL+I+IYL DPL++SVFPSLLLITTL
Sbjct  21   LAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTL  80

Query  63   yrlsltistsrlvllQHNAGNIVDAFGRfvvggnltvglvvftiitivqfivitKGIERV  122
            YRL+LTIST+RLVLLQH+AG+IV+AFG+FVVGGNL+VG+++FTIIT+VQFIVITKG ERV
Sbjct  81   YRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERV  140

Query  123  AEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGAMDGAMKFVKGD  182
            AEVSARFSLDGMPGKQMSIDGD+RAG ID+ +A+ LR++VQ+ESR++GAMDGAMKFVKGD
Sbjct  141  AEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGD  200

Query  183  TiagiivvlvniiggiiiaivQYDMSMSEAVHTYSVLSIGDGLCGQIPSLLISLSAGIIV  242
            +IAGIIV+L+NIIGGI I+++Q  MS  EA++TY+VLSIGDGLC+QIPSLLIS++AGIIV
Sbjct  201  AIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIV  260

Query  243  TRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLAFIPGfpfiilaffsallalpiil  302
            TRVPG ++Q+LA EL+ Q++RQP++L L+A +L ++A++PGFPF+I+  ++A +A P +L
Sbjct  261  TRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFL  320

Query  303  iRRKKAVVSVSGAEAQEKDS-------MVPGACPLILRLTPTLHSADLIRDIDAMRWLVF  355
            + RK+  +S  G      +        M PGA PL+L+ ++ LH ++L RDID++RW  F
Sbjct  321  LYRKNRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWF  380

Query  356  EDTGVPLPEVNIEVLPEPTEK-LTVLLYQEPVFSLSIPTQADYLLIGADASVVGESQTLP  414
            E+ GVPLPEV+I   P  +E+ L+V +YQE V+ + +P ++  LL  + +S+V ++Q L 
Sbjct  381  EHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS-LLLTRPCSSLVTNNQVLG  439

Query  415  NGMGQICWLSKDMGNKAQGFGLEVFAGSQRISALLKCALLRHMGEFIGVQETRYLMNAME  474
              MG + WL    + +A+ +G+    G QRI + L   + R  +EFIGVQETRYLM+AME
Sbjct  440  AKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAME  499

Query  475  KNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPREKDVLMLTEYV  534
              Y+ELVKELQRQ+P+ K+AE LQRLV E +SIRDLR IFG+L+ WAP+EKD++MLTEYV
Sbjct  500  GRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYV  559

Query  535  rialrrhilrrlNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSSRHKSQILQLIE  594
            RIALRRH+ RR++ +   +++LR+G+G+E+L+R+SIRQT+ GTY+AL  R+   IL+ I 
Sbjct  560  RIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIK  619

Query  595  QALKRSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEECFVQVVESIDLSEEELA  654
            +A+  +    ++T++D RRF+RKI E  LF +P+LSWQELG+E  ++V  +I+L  +EL 
Sbjct  620  NAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIGDELD  679

Query  655  DNE  657
            +  
Sbjct  680  ETA  682

69) HCH_05101 in NC_007645


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  464 bits (1749),  Expect = 9e-132, Method: Compositional matrix adjust.
 Identities = 325/691 (48%), Positives = 507/691 (74%), Gaps = 23/691 (3%)

Query  1    MSRGASV--LSALSQRNDVVLAIFLVGIIFMMILPMPTMLVDVMIAINMGVSVILLMLAL  58
            MS++A V  L+ ++ R+D+ LA+ L+  +FMMILP+PT +VD++IAIN++ SVILLM+++
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  59   YIKSPLDFSVFPSMLLITTMFRLALSITTTRLILLQADAGQIVYtfgnfvvggnlvvggv  118
            Y++ PL+FSVFPS+LLITT++RLAL+I+TTRL+LLQ DAG+IV +FG+FVVGGNL VG +
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  119  ifliltivQFLVITKGSERVAEVSARFSLDSMPGKQMSIDGDMRAGVIDMEEARVRRAKV  178
            IF I+T+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID  EA+  R +V
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  179  EKESQLYGSMDGAMKFVKGDAIAGLIITAVNILGGILVGVTQNGLSAGDAAAIYSVLTIG  238
            +KES+L+G+MDGAMKFVKGDAIAG+I+  +NI+GGI +GV Q+ +SA +A   Y+VL+IG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  239  DGLVAQIPALFISITAGFIVTRVSTDESENLGRDIGGQIGAQPKalfiggalllgfaMIP  298
            DGL AQIP+L+ISITAG+IVTRV+  + ++L+ +++ Q+G QP AL +++A+L  FA++P
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  299  GFPTMVFLVLAGLICSIGFIMSRKARHADTDDDDIPAMAAAGQTRTPSKTPEKDDFSPTV  358
            GFP ++F+ LA+ + + +F++ RK R+   D+    +   +G T     TP       +V
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGAT-GQRMTPG------AV  353

Query  359  PLLLDVAASCQQMLKPSELNAELYRVRRALYLDLGVPFPGIHLRFNESMKDGEYTILMHE  418
            PL+L+    C   L  ++L  ++  +R+  + +LGVP+P +++R + ++ +   ++ + +
Sbjct  354  PLMLH----CASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQ  409

Query  419  VPVAQGRLPADKVVVLQDQEQLDILGIPHQQGELAMSANPY-WVEKSHAPAMENAGIEYL  477
              V +  LP+D +++ +    L    + ++Q  L+    ++ W++  +A      GI Y+
Sbjct  410  ERVLEVVLPPDSLLLTRPCSSL----VTNNQV-LGAKMGSFDWLDAKQAMQARTLGIPYV  464

Query  478  DAPRLLIYHLSFILKRYASEFIGLQECRYLLDQMEGQYGDLVKEVQRVVPIQRIAEILQR  537
            ++ + +I  L+ ++ RY++EFIG+QE RYL+D MEG+YG+LVKE+QR +P+ ++AEILQR
Sbjct  465  EGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQR  524

Query  538  LVSEDISIRNLRAIMEALVEWGQKEKDTVLLTEYVRKSLSRYISYKFCNGQNVLPAYMLD  597
            LV E+ISIR+LR+I  ALV W+ KEKD V+LTEYVR +L R +  +F + +  ++   L+
Sbjct  525  LVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLG  584

Query  598  QDLEESIRGGIRQTSSGAYLALDPDTTQNFINELHREVGDLDALQHKPVLLVSMDIRRYV  657
            +++E+ IR++IRQTSSG+Y AL+   +  ++N +    ++    ++ +VLL ++D+RR+V
Sbjct  585  DGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVRRFV  640

Query  658  RKMIERDFFELCVLSYQELTQDITVQPISRI  688
            RK+IERD+F L VLS QEL +++ ++  + I
Sbjct  641  RKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

70) escV in NC_013364


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  446 bits (1679),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 312/643 (49%), Positives = 490/643 (77%), Gaps = 9/643 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPFSEALSLFSVLSVGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+  EA++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMLVMAIIPGFPTLVFLFLAVCLLGIAWKL--QKKRTFGTG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPLILNLSNNIYSSDIAQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ ++N+  ++++++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNEA  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+++   +   +A
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHLSGMDV-YATTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKEL  508
            +Q + +   +++ Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKEL
Sbjct  451  KQAM-QARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKEL  509

Query  509  QRQLGLSKIVDILQRLVEENISIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILG  568
            QRQ+ ++K+ +ILQRLVEENISIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  
Sbjct  510  QRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCR  569

Query  569  RYSVRGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERSEQIIGFLKNIMNPTGNGV  628
            R+S   T ++V  +G ++E+ +R+SIRQTSSG+Y  +   +S  I+  +KN      ++V
Sbjct  570  RFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAV  629

Query  629  ILTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            +LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  630  LLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

71) escV in NC_013716


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  439 bits (1652),  Expect = 4e-124, Method: Compositional matrix adjust.
 Identities = 311/643 (49%), Positives = 487/643 (76%), Gaps = 9/643 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPFSEALSLFSVLSVGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+  EA++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIIQQVSVNSRPFLISAALMLVMAIIPGFPTLVFLFLAVCLLGIAWKL--QKKRAFGST  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R     
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NSKDSLGGDLSNSQNVSPGAEPLILNLSNNIYSADITQQIEVVRWGFFEESGIPLPKIIV  390
             ++++   + + +Q ++PGA PL+L+ ++N+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPIKN-NDSVVEFLLYQESIYKDTLTKDTVYFEAGHGDISFEFVQEKISINSIVYKTNEA  449
                   ++ +   +YQE +    L  D++ +    + +  +  ++ ++ +   +   +A
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHLSGMNV-YSETNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKEL  508
            +Q + +   + + Y E +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKEL
Sbjct  451  KQAM-QARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKEL  509

Query  509  QRQLGLSKIVDILQRLVEENISIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILG  568
            QRQ+ ++K+ +ILQRLVEENISIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  
Sbjct  510  QRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCR  569

Query  569  RYSVRGTILNVWLIGSDIENELRESIRQTSSGSYLNISPERSEQIIGFLKNIVNPTSNGV  628
            R+S   T ++V  +G ++E+ +R+SIRQTSSG+Y  +   +S  I+  +KN      ++V
Sbjct  570  RFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAV  629

Query  629  ILTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            +LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  630  LLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

72) escV in NC_013361


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  437 bits (1647),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 314/643 (49%), Positives = 489/643 (77%), Gaps = 9/643 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPFSEALSLFSVLSVGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+  EA++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMIVMAIIPGFPTLVFLFLAVCLLGIAWKL--QKKRTFGTG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPlilnlssniyssDITQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ +SN+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLTDDTVYFEAGHAEISFEFVQEKLSANSIVYKTNEA  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+A+   +   +A
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHVSGMDV-YAKTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKEL  508
            +Q + +   +++ Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKEL
Sbjct  451  KQAM-QARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKEL  509

Query  509  QRQLGLSKIVDILQRLVEENISIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILG  568
            QRQ+ ++K+ +ILQRLVEENISIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  
Sbjct  510  QRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCR  569

Query  569  RYSVRGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERSEQIIGFLKNIVNPTGNGV  628
            R+S   T ++V  +G ++E+ +R+SIRQTSSG+Y  +   +S  I+  +KN      ++V
Sbjct  570  RFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAV  629

Query  629  ILTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            +LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  630  LLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

73) escV in NC_013353


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  437 bits (1644),  Expect = 2e-123, Method: Compositional matrix adjust.
 Identities = 313/643 (49%), Positives = 489/643 (77%), Gaps = 9/643 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPFSEALSLFSVLSVGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+  EA++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMIVMAIIPGFPTLVFLFLAVCLLGIAWKL--QKKKTFGTG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  ++++    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPlilnlssniyssDITQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ +SN+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLTDDTVYFEAGHAEISFEFVQEKLSANSIVYKTNEA  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+A+   +   +A
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHVSGMDV-YAKTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKEL  508
            +Q + +   +++ Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKEL
Sbjct  451  KQAM-QARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKEL  509

Query  509  QRQLGLSKIVDILQRLVEENISIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILG  568
            QRQ+ ++K+ +ILQRLVEENISIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  
Sbjct  510  QRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCR  569

Query  569  RYSVRGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERSEQIIGFLKNIVNPTGNGV  628
            R+S   T ++V  +G ++E+ +R+SIRQTSSG+Y  +   +S  I+  +KN      ++V
Sbjct  570  RFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAV  629

Query  629  ILTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            +LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  630  LLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

74) escV in NC_011601


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  434 bits (1633),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 311/642 (49%), Positives = 486/642 (76%), Gaps = 7/642 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPFSEALSLFSVLSVGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+  EA++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMLVMAIIPGFPTLVFLFLAVCLLGIAWKL--QKKRTFGAG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPlilnlssniyssDITQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ +SN+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKT  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+++   +    +
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHLTGMDVYATTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKELQ  509
            +Q +   T    Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKELQ
Sbjct  451  KQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQ  510

Query  510  RQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILGR  569
            RQ+ ++K+ +ILQRLVEEN+SIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  R
Sbjct  511  RQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRR  570

Query  570  YSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVI  629
            +S + T ++V  +G ++E+ +R+SIRQTSSG+Y  +   ++  I+  +KN      ++V+
Sbjct  571  FSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVL  630

Query  630  LTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  631  LTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

75) HCH_03273 in NC_007645


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  421 bits (1585),  Expect = 7e-119, Method: Compositional matrix adjust.
 Identities = 322/696 (47%), Positives = 513/696 (74%), Gaps = 25/696 (3%)

Query  1    MTLARLNQTLQLIAGRKDILFAAMLVAIIFMMILPLPTVLVDILIgvnmglavvllmvgv  60
            M+ + L + L +I++R+DI++A ML+  +FMMILPLPT +VD+LI++N++++V+LLM+++
Sbjct  1    MSKSALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISI  60

Query  61   YLRSPLEFVAFPSVllittlfrlslsitttrlillQADAGSIIEAfggfvvggnlvvglv  120
            YLR PLEF  FPS+LLITTL+RL+L+I+TTRL+LLQ DAG I+EAFG FVVGGNL VG++
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  121  ifliitvvQFLVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVDEARHRRSQV  180
            IF IITVVQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID  EA++ R +V
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  181  QKESQLYGSMDGAMKFVKGDAIAGLIIIAVNILGGIAIGTLQNGMTSGEALELYALLTIG  240
            QKES+L+G+MDGAMKFVKGDAIAG+I+I +NI+GGI+IG +Q+ M++ EA++ YA+L+IG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  241  DGLVAQIPALFIAITAGVIVTRVTTDESENLGADIANQIVSKPQAILIGGGLLFTFALIP  300
            DGL AQIP+L+I+ITAG+IVTRV   + ++L+ ++A Q+  +P+A+ +++++L  FAL+P
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  301  GFPTLTFIVLALTLTGIGVFTLRQSKNASADKHPPLSAMAAAGQPPSKAQLNEAEEFTFT  360
            GFP L FI LA ++++ + +  R+++  S D ++     +++ +  + +Q   +     +
Sbjct  301  GFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRAN----GGSEEGGATGQRMTPG----A  352

Query  361  VPLLVDIAADAEDALDPNALNEEILKIRRSLYLDLGVPFPGIHLRINHGLSDGRYKIHLQ  420
            VPL+++ A++    L+   L  +I  +R+  + +LGVP+P +++R +  L++    +++ 
Sbjct  353  VPLMLHCASN----LHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVY  408

Query  421  ETPIAEGFIKPRQLLVRDQKEQLDLLAIEHNSEVELLPDAPAY-WVEQRHQTSLDKMEVA  479
            +  + E  + P  LL+      L       N++V L +   ++ W++ ++      + ++
Sbjct  409  QERVLEVVLPPDSLLLTRPCSSL-----VTNNQV-LGAKMGSFDWLDAKQAMQARTLGIP  462

Query  480  YL-TPPRVLSYHLSIILKKYAQEFIGIQETRFLLEKMEGRYGELVKEVQRLLPIQKITEI  538
            Y+    R+++  L+ ++ +Y+ EFIG+QETR+L++ MEGRYGELVKE+QR +P+ K++EI
Sbjct  463  YVEGHQRIITC-LTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEI  521

Query  539  LQRLVSEDISIRNLRSILEALAEWAQKEKETVLLTEYVRNSLRRYISYKYSNGQNILPAY  598
            LQRLV E+ISIR+LR+I+ AL  WA KEK+ V+LTEYVR +LRR +  ++S+ +  ++  
Sbjct  522  LQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVL  581

Query  599  MLDQSLEDAIRGGVRQTSSGAYLALEPDTTRKIVEITRRTVGDLNPGAQKVVVITSMDVR  658
             L++++E+ IR+++RQTSSG+Y ALE   +  I++  + + ++     Q  V++T++DVR
Sbjct  582  RLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVR  637

Query  659  RYLRKLLERDMRQLPILSYQDLTPEITIQPLGRIAL  694
            R++RK++ERD+  LP+LS Q+L  E+ ++  G I L
Sbjct  638  RFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

76) M892_04485 in NC_022269


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  420 bits (1581),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 317/709 (45%), Positives = 513/709 (73%), Gaps = 44/709 (6%)

Query  2    NKLIDILNKVGQRKDIMLAVMLLAIVFMMILPLPTALVDVLIGTNMSIAVVLLMLAIYIT  61
            + L+  L  +  R+DI LAVMLL  VFMMILPLPT++VD+LI+ N++++V+LLM++IY+ 
Sbjct  4    SALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLR  63

Query  62   KPLEFSAFPAVllittlfrlslsitttrlillQGDAGQIVYtfgnfvvggnlvvgivvfl  121
             PLEFS FP++LLITTL+RL+L+I+TTRL+LLQ DAG+IV +FG+FVVGGNL VG+++F 
Sbjct  64   DPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFT  123

Query  122  iitivQFMVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVHEARHRRSLIEKE  181
            IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID  EA++ R  ++KE
Sbjct  124  IITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKE  183

Query  182  SQMYGSMDGAMKFVKGDSIAgliiivvnilggvtigvtQKGMSASEALELFAILTVGDGL  241
            S+++G+MDGAMKFVKGD+IAG+I+I++NI+GG+TIGV Q  MSA EA++ +A+L++GDGL
Sbjct  184  SRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGL  243

Query  242  VSQIPALFIAITAGIIVTRVSNEDSSDLGSDIGGQVTAQPRALLVGGVLLILFALIPGFP  301
             +QIP+L+I+ITAGIIVTRV+  +   L+++++ QV  QP AL +++ +L +FAL+PGFP
Sbjct  244  CAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP  303

Query  302  KVTFLILAAIVGGGGFFLFYQQKKQSEYDSSDLPSFVAQGAGSPAAKPNKPTPSRNSKGK  361
             + F+ LAA V++ +F+L+ ++++ S+           +G ++ ++    +T  R + G 
Sbjct  304  FLIFITLAAAVAAPAFLLYRKNRRISQ-----------DGRANGGSEEGGATGQRMTPG-  351

Query  362  LGEQEEFAMTVPLLIDLDSRLQESLEAVALNDELARVRRALYLDLGVPFPGIHLRFNEGM  421
                     +VPL+++  S L+++     L  ++  +R+  + +LGVP+P +++R +  +
Sbjct  352  ---------AVPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL  398

Query  422  SNGEYLIQLQEVPVARGRIESEKLLVTEGNEQI----DLLGVPYEKDDDFLPGITSIWVD  477
            ++    +Q+ +  V    + ++ LL+T     +    ++LG    K + F       W+D
Sbjct  399  AENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLG---AKMGSF------DWLD  449

Query  478  QSHHEKLQNSHVGFL-TPDRILTYHLSHVLKEYAQDFIGIQETRYLLEQMESSYSELVKE  536
              +  + +   + ++   +RI+T  L++V+  Y+ +FIG+QETRYL++ ME+ Y+ELVKE
Sbjct  450  AKQAMQARTLGIPYVEGHQRIITC-LTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKE  508

Query  537  AQRIVPLQKMTEILQRLVSEDISIRNLRVILEAMVEWGQKEKDVVQLTEYIRSSLKRYIC  596
             QR +P+ K++EILQRLV E+ISIR+LR I+ A+V W+ KEKD+V LTEY+R +L+R +C
Sbjct  509  LQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLC  568

Query  597  YKYASGQNMLPAYLLDQSLEDTIRNGIRQTSAGSYLALDPSVTQQFVSDVKQTIGDLSRM  656
             +++  +  ++   L++++E+ IR++IRQTS+G+Y AL+   +  +++ +K+++++    
Sbjct  569  RRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----  624

Query  657  PNKPVLVVSMDVRRYVRKLIESEYYELPVLSFQELTQQINIQPLGRVGM  705
             + +VL+ ++DVRR+VRK+IE + + LPVLS QEL +++N++  G + +
Sbjct  625  NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

77) VIBHAR_01736 in NC_009783


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  420 bits (1581),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 317/709 (45%), Positives = 513/709 (73%), Gaps = 44/709 (6%)

Query  2    NKLIDILNKVGQRKDIMLAVMLLAIVFMMILPLPTALVDVLIGTNMSIAVVLLMLAIYIT  61
            + L+  L  +  R+DI LAVMLL  VFMMILPLPT++VD+LI+ N++++V+LLM++IY+ 
Sbjct  4    SALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLR  63

Query  62   KPLEFSAFPAVllittlfrlslsitttrlillQGDAGQIVYtfgnfvvggnlvvgivvfl  121
             PLEFS FP++LLITTL+RL+L+I+TTRL+LLQ DAG+IV +FG+FVVGGNL VG+++F 
Sbjct  64   DPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFT  123

Query  122  iitivQFMVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVHEARHRRSLIEKE  181
            IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID  EA++ R  ++KE
Sbjct  124  IITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKE  183

Query  182  SQMYGSMDGAMKFVKGDSIAgliiivvnilggvtigvtQKGMSASEALELFAILTVGDGL  241
            S+++G+MDGAMKFVKGD+IAG+I+I++NI+GG+TIGV Q  MSA EA++ +A+L++GDGL
Sbjct  184  SRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGL  243

Query  242  VSQIPALFIAITAGIIVTRVSNEDSSDLGSDIGGQVTAQPRALLVGGVLLILFALIPGFP  301
             +QIP+L+I+ITAGIIVTRV+  +   L+++++ QV  QP AL +++ +L +FAL+PGFP
Sbjct  244  CAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP  303

Query  302  KVTFLILAAIVGGGGFFLFYQQKKQSEYDSSDLPSFVAQGAGSPAAKPNKPTPSRNSKGK  361
             + F+ LAA V++ +F+L+ ++++ S+           +G ++ ++    +T  R + G 
Sbjct  304  FLIFITLAAAVAAPAFLLYRKNRRISQ-----------DGRANGGSEEGGATGQRMTPG-  351

Query  362  LGEQEEFAMTVPLLIDLDSRLQESLEAVALNDELARVRRALYLDLGVPFPGIHLRFNEGM  421
                     +VPL+++  S L+++     L  ++  +R+  + +LGVP+P +++R +  +
Sbjct  352  ---------AVPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL  398

Query  422  SNGEYLIQLQEVPVARGRIESEKLLVTEGNEQI----DLLGVPYEKDDDFLPGITSIWVD  477
            ++    +Q+ +  V    + ++ LL+T     +    ++LG    K + F       W+D
Sbjct  399  AENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLG---AKMGSF------DWLD  449

Query  478  QSHHEKLQNSHVGFL-TPDRILTYHLSHVLKEYAQDFIGIQETRYLLEQMESSYSELVKE  536
              +  + +   + ++   +RI+T  L++V+  Y+ +FIG+QETRYL++ ME+ Y+ELVKE
Sbjct  450  AKQAMQARTLGIPYVEGHQRIITC-LTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKE  508

Query  537  AQRIVPLQKMTEILQRLVSEDISIRNLRVILEAMVEWGQKEKDVVQLTEYIRSSLKRYIC  596
             QR +P+ K++EILQRLV E+ISIR+LR I+ A+V W+ KEKD+V LTEY+R +L+R +C
Sbjct  509  LQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLC  568

Query  597  YKYASGQNMLPAYLLDQSLEDTIRNGIRQTSAGSYLALDPSVTQQFVSDVKQTIGDLSRM  656
             +++  +  ++   L++++E+ IR++IRQTS+G+Y AL+   +  +++ +K+++++    
Sbjct  569  RRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----  624

Query  657  PNKPVLVVSMDVRRYVRKLIESEYYELPVLSFQELTQQINIQPLGRVGM  705
             + +VL+ ++DVRR+VRK+IE + + LPVLS QEL +++N++  G + +
Sbjct  625  NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

78) NH44784_014751 in NC_021285


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  418 bits (1572),  Expect = 8e-118, Method: Compositional matrix adjust.
 Identities = 322/697 (47%), Positives = 520/697 (75%), Gaps = 30/697 (4%)

Query  3    ALNRVVAAATSRNDIVLAVLIVSIIFMMILPLPTTLVDVLIGANMTLSAILLMVAMYlps  62
            AL R ++  T+R+DI LAV+++  +FMMILPLPTT+VD+LI+ N+++S ILLM+++YL  
Sbjct  5    ALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRD  64

Query  63   plafssfpsvllvTTLFRLGISIATTRLILLQGDAGHIIETfgnfvvggnlivglvvfli  122
            PL FS FPS+LL+TTL+RL+++I+TTRL+LLQ DAG+I+E+FG+FVVGGNL VG+++F I
Sbjct  65   PLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTI  124

Query  123  lTIVQFVVITKGAERVAEVAARFSLDAMPGKQMSIDADLRAGTIDMDEARKRRSVVEKES  182
            +T+VQF+VITKG+ERVAEV+ARFSLD+MPGKQMSID+D+RAG+ID  EA++ R  V+KES
Sbjct  125  ITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKES  184

Query  183  QLYGAMDGAMKFVKGDAIAGLIIVAVNLLGGILIGTMQRGLSAGEAVQVYSILTIGDGLI  242
            +L+GAMDGAMKFVKGDAIAG+I++ +N++GGI IG MQ+ +SA EA++ Y++L+IGDGL 
Sbjct  185  RLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLC  244

Query  243  AQIPALFIAICAGIIVTRVQTGDGPSNVGKDIGAQVLAQPRalliaaaiaigmglipgmp  302
            AQIP+L+I+I AGIIVTRV  G    +++++++ QV  QP AL +AAAI    +L+PG P
Sbjct  245  AQIPSLLISITAGIIVTRV-PGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP  303

Query  303  TLTFLALAAVVGTIGFVLLRGTRKVVDEKTGEITEIPALAADGQKPQARPRADGSAEFAP  362
             L F++LAA V++ +F+L R  R++ ++  ++     + +A GQ+             + 
Sbjct  304  FLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEG-GATGQRMT-----------PG  351

Query  363  TLPLMIDVAAALQRSFDADELNEELLKIRRALYFDLGVPFPGIQLRFNDALPADSYNILL  422
            ++PLM++ A+ L+++    +L  ++  +R+  + +LGVP+P +++R + +L+ ++ ++ +
Sbjct  352  AVPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQV  407

Query  423  SEVPVSQGKLRPGAVLVRDTEQNLQALQVPYETDKRFL-PNVPTL-WVDAGLAPTLTAAG  480
             +  V +  L P+++L+     +L        T+++ L +++ ++ W+DA  A    + G
Sbjct  408  YQERVLEVVLPPDSLLLTRPCSSL-------VTNNQVLGAKMGSFDWLDAKQAMQARTLG  460

Query  481  IPFLDPHQVLTWHLAFVLKKYSSDFIGIQETRFLLTAMEDRFPDLVKEALRVMPVQKIAE  540
            IP+++ HQ +   L+ V+ +Y+++FIG+QETR+L+ AME+R+ +LVKE  R +PV K+AE
Sbjct  461  IPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAE  520

Query  541  ILQRLVSEDISVRNLRAVLEALIEWGQKEKDSVLLTEYVRVSLKRHISYKYSSGQNILPA  600
            ILQRLV E+IS+R+LR+++ AL+ W+ KEKD V+LTEYVR++L+RH+  ++S  +  ++ 
Sbjct  521  ILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISV  580

Query  601  YLLAPNVEETVRGAIRQTSAGSYLALDPNASRKLVDNIKRVAGDLTAAAQKPVLLTSMDI  660
              L+  VE+ +R++IRQTS+G+Y AL+   S  ++++IK   ++     Q +VLLT++D+
Sbjct  581  LRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDV  636

Query  661  RRYLRKMIEQDLYELPVLSYQELTQEINVQPLARVDL  697
            RR++RK+IE+DL+ LPVLS QEL +E+N++  + ++L
Sbjct  637  RRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

79) bcrD in NC_018829


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  416 bits (1565),  Expect = 3e-117, Method: Compositional matrix adjust.
 Identities = 326/692 (48%), Positives = 513/692 (75%), Gaps = 26/692 (3%)

Query  10   LQRAVALATSRNDivlavlivaivFMMILPLPTTLVDVLIGANMTLSAVLLMVAMYlpsp  69
            L R++++ T+R+DI LAV+++  VFMMILPLPTT+VD+LI+ N+++S +LLM+++YL  P
Sbjct  6    LVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDP  65

Query  70   lafssfpsvllvTTLFRLGISIATTRLILLQGDAGHIIETfgnfvvggnlivglvvflil  129
            L FS FPS+LL+TTL+RL+++I+TTRL+LLQ DAG+I+E+FG+FVVGGNL VG+++F I+
Sbjct  66   LEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTII  125

Query  130  TIVQFVVITKGAERVAEVAARFSLDAMPGKQMSIDADLRAGTIDMDEARRRRRTVEKESQ  189
            T+VQF+VITKG+ERVAEV+ARFSLD+MPGKQMSID+D+RAG+ID  EA+R R  V+KES+
Sbjct  126  TVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESR  185

Query  190  LYGAMDGAMKFVKGDAIAGLIIvavnllggmlvgvlqrglSAGEAVQTYAILTIGDGLIA  249
            L+GAMDGAMKFVKGDAIAG+I++ +N++GG+ +GV+Q+ +SA EA++TYA+L+IGDGL A
Sbjct  186  LFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCA  245

Query  250  QIPALFIAICAGIIVTRVQTGDSPSNVGTDIGAQVLAQPRALVIAGAISAGLGLIPGMPT  309
            QIP+L+I+I AGIIVTRV  G +  +++ +++ QV  QP AL +A+AI + ++L+PG P 
Sbjct  246  QIPSLLISITAGIIVTRV-PGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPF  304

Query  310  LVFFALAAVVGTIGFVLLRASQRPPEGAEPALAGMAADGQPRTRAPADGQAEFAPTVPLI  369
            L+F++LAA V++ +F+L R ++R ++++ +   G + +G       A GQ   + +VPL+
Sbjct  305  LIFITLAAAVAAPAFLLYRKNRRISQDGRA--NGGSEEG------GATGQRMTPGAVPLM  356

Query  370  IDVAARLQPRFEPATLTDDLLQIRRALYFDLGVPFPGIQLRFTEALAANTYTIVLSEIPV  429
            ++ A+ L+     + L  D+  +R+  + +LGVP+P +++R   +LA NT ++ + +  V
Sbjct  357  LHCASNLH----HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERV  412

Query  430  AQGMLRDDAVLV-RDTEQNLQALRIAYETGAAFLPDTPTIWVAASLTGALRDAGIPYL-G  487
             + +L  D++L+ R     +   ++     ++F       W+ A  +   R  GIPY+ G
Sbjct  413  LEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSF------DWLDAKQAMQARTLGIPYVEG  466

Query  488  ISQILTWHLAYVLKKYSADFIGIQETRFLLSAMEERFPDLVKECLRVMPVQKIAEILQRL  547
              +I+T  L+ V+ +Y+A+FIG+QETR+L+ AME R+ +LVKE  R +PV K+AEILQRL
Sbjct  467  HQRIIT-CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  548  VSEEVSIRNLRAVLEALVEWGQKEKDTVLLTEYVRIALKRYISHKYTSGHNILPAYLLAP  607
            V E++SIR+LR+++ ALV W+ KEKD V+LTEYVRIAL+R + ++++     ++   L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  608  KVEETVRAAIRQTAAGSYLALDPDTTRRLVEHIRQCVGDLAAGASRPVLLTSMDIRRYTR  667
             VE+ +R +IRQT++G+Y AL+   +  +++ I++  ++       +VLLT++D+RR+ R
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVRRFVR  641

Query  668  KMIEADLYALPVLSYQELTPEINVQPLGRVDL  699
            K+IE DL+ LPVLS QEL  E+N++  G ++L
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

80) bcrD in NC_017223


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  415 bits (1563),  Expect = 4e-117, Method: Compositional matrix adjust.
 Identities = 327/692 (48%), Positives = 513/692 (75%), Gaps = 26/692 (3%)

Query  10   LQRAVALATSRNDivlavlivaivFMMILPLPTTLVDVLIGANMTLSAVLLMVAMYlpsp  69
            L R++++ T+R+DI LAV+++  VFMMILPLPTT+VD+LI+ N+++S +LLM+++YL  P
Sbjct  6    LVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDP  65

Query  70   lafssfpsvllvTTLFRLGISIATTRLILLQGDAGHIIETfgnfvvggnlivglvvflil  129
            L FS FPS+LL+TTL+RL+++I+TTRL+LLQ DAG+I+E+FG+FVVGGNL VG+++F I+
Sbjct  66   LEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTII  125

Query  130  TIVQFVVITKGAERVAEVAARFSLDAMPGKQMSIDADLRAGTIDMDEARRRRRTVEKESQ  189
            T+VQF+VITKG+ERVAEV+ARFSLD+MPGKQMSID+D+RAG+ID  EA+R R  V+KES+
Sbjct  126  TVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESR  185

Query  190  LYGAMDGAMKFVKGDAIAGLIIvavnllggmlvgvlqrglSAGEAVQTYAILTIGDGLIA  249
            L+GAMDGAMKFVKGDAIAG+I++ +N++GG+ +GV+Q+ +SA EA++TYA+L+IGDGL A
Sbjct  186  LFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCA  245

Query  250  QIPALFIAICAGIIVTRVQTGDGPSNVGTDIGAQVLAQPRALVIAGAISAGLGLIPGMPT  309
            QIP+L+I+I AGIIVTRV  G    +++ +++ QV  QP AL +A+AI + ++L+PG P 
Sbjct  246  QIPSLLISITAGIIVTRV-PGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPF  304

Query  310  LVFFALAAAVGTIGFVLLRASQRPPEGAEPALAGMAADGQPRTRAPADGQAEFAPTVPLI  369
            L+F++LAAAV++ +F+L R ++R ++++ +   G + +G       A GQ   + +VPL+
Sbjct  305  LIFITLAAAVAAPAFLLYRKNRRISQDGRA--NGGSEEG------GATGQRMTPGAVPLM  356

Query  370  IDVAARLQPRFEPATLTDDLLQIRRALYFDLGVPFPGIQLRFTEALAANTYTIVLSEIPV  429
            ++ A+ L+     + L  D+  +R+  + +LGVP+P +++R   +LA NT ++ + +  V
Sbjct  357  LHCASNLH----HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERV  412

Query  430  AQGMLRDDAVLV-RDTEQNLQALRIAYETGAAFLPDTPTIWVAASLTGALRDAGIPYL-G  487
             + +L  D++L+ R     +   ++     ++F       W+ A  +   R  GIPY+ G
Sbjct  413  LEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSF------DWLDAKQAMQARTLGIPYVEG  466

Query  488  ISQILTWHLAYVLKKYSADFIGIQETRFLLSAMEERFPDLVKECLRVMPVQKIAEILQRL  547
              +I+T  L+ V+ +Y+A+FIG+QETR+L+ AME R+ +LVKE  R +PV K+AEILQRL
Sbjct  467  HQRIIT-CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  548  VSEEVSIRNLRAVLEALVEWGQKEKDTVLLTEYVRIALKRYISHKYTSGHNILPAYLLAP  607
            V E++SIR+LR+++ ALV W+ KEKD V+LTEYVRIAL+R + ++++     ++   L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  608  KVEETVRAAIRQTAAGSYLALDPDTTRRLVEHIRQCVGDLAAGASRPVLLTSMDIRRYTR  667
             VE+ +R +IRQT++G+Y AL+   +  +++ I++  ++       +VLLT++D+RR+ R
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVRRFVR  641

Query  668  KMIEADLYALPVLSYQELTPEINVQPLGRVDL  699
            K+IE DL+ LPVLS QEL  E+N++  G ++L
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

81) bcrD in NC_002929


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  415 bits (1563),  Expect = 4e-117, Method: Compositional matrix adjust.
 Identities = 327/692 (48%), Positives = 513/692 (75%), Gaps = 26/692 (3%)

Query  10   LQRAVALATSRNDivlavlivaivFMMILPLPTTLVDVLIGANMTLSAVLLMVAMYlpsp  69
            L R++++ T+R+DI LAV+++  VFMMILPLPTT+VD+LI+ N+++S +LLM+++YL  P
Sbjct  6    LVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDP  65

Query  70   lafssfpsvllvTTLFRLGISIATTRLILLQGDAGHIIETfgnfvvggnlivglvvflil  129
            L FS FPS+LL+TTL+RL+++I+TTRL+LLQ DAG+I+E+FG+FVVGGNL VG+++F I+
Sbjct  66   LEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTII  125

Query  130  TIVQFVVITKGAERVAEVAARFSLDAMPGKQMSIDADLRAGTIDMDEARRRRRTVEKESQ  189
            T+VQF+VITKG+ERVAEV+ARFSLD+MPGKQMSID+D+RAG+ID  EA+R R  V+KES+
Sbjct  126  TVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESR  185

Query  190  LYGAMDGAMKFVKGDAIAGLIIvavnllggmlvgvlqrglSAGEAVQTYAILTIGDGLIA  249
            L+GAMDGAMKFVKGDAIAG+I++ +N++GG+ +GV+Q+ +SA EA++TYA+L+IGDGL A
Sbjct  186  LFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCA  245

Query  250  QIPALFIAICAGIIVTRVQTGDGPSNVGTDIGAQVLAQPRALVIAGAISAGLGLIPGMPT  309
            QIP+L+I+I AGIIVTRV  G    +++ +++ QV  QP AL +A+AI + ++L+PG P 
Sbjct  246  QIPSLLISITAGIIVTRV-PGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPF  304

Query  310  LVFFALAAAVGTIGFVLLRASQRPPEGAEPALAGMAADGQPRTRAPADGQAEFAPTVPLI  369
            L+F++LAAAV++ +F+L R ++R ++++ +   G + +G       A GQ   + +VPL+
Sbjct  305  LIFITLAAAVAAPAFLLYRKNRRISQDGRA--NGGSEEG------GATGQRMTPGAVPLM  356

Query  370  IDVAARLQPRFEPATLTDDLLQIRRALYFDLGVPFPGIQLRFTEALAANTYTIVLSEIPV  429
            ++ A+ L+     + L  D+  +R+  + +LGVP+P +++R   +LA NT ++ + +  V
Sbjct  357  LHCASNLH----HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERV  412

Query  430  AQGMLRDDAVLV-RDTEQNLQALRIAYETGAAFLPDTPTIWVAASLTGALRDAGIPYL-G  487
             + +L  D++L+ R     +   ++     ++F       W+ A  +   R  GIPY+ G
Sbjct  413  LEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSF------DWLDAKQAMQARTLGIPYVEG  466

Query  488  ISQILTWHLAYVLKKYSADFIGIQETRFLLSAMEERFPDLVKECLRVMPVQKIAEILQRL  547
              +I+T  L+ V+ +Y+A+FIG+QETR+L+ AME R+ +LVKE  R +PV K+AEILQRL
Sbjct  467  HQRIIT-CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  548  VSEEVSIRNLRAVLEALVEWGQKEKDTVLLTEYVRIALKRYISHKYTSGHNILPAYLLAP  607
            V E++SIR+LR+++ ALV W+ KEKD V+LTEYVRIAL+R + ++++     ++   L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  608  KVEETVRAAIRQTAAGSYLALDPDTTRRLVEHIRQCVGDLAAGASRPVLLTSMDIRRYTR  667
             VE+ +R +IRQT++G+Y AL+   +  +++ I++  ++       +VLLT++D+RR+ R
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVRRFVR  641

Query  668  KMIEADLYALPVLSYQELTPEINVQPLGRVDL  699
            K+IE DL+ LPVLS QEL  E+N++  G ++L
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

82) bcrD in NC_018518


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  415 bits (1562),  Expect = 5e-117, Method: Compositional matrix adjust.
 Identities = 326/692 (48%), Positives = 513/692 (75%), Gaps = 26/692 (3%)

Query  10   LQRAVALATSRNDivlavlivaivFMMILPLPTTLVDVLIGANMTLSAVLLMVAMYlpsp  69
            L R++++ T+R+DI LAV+++  VFMMILPLPTT+VD+LI+ N+++S +LLM+++YL  P
Sbjct  6    LVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDP  65

Query  70   lafssfpsvllvTTLFRLGISIATTRLILLQGDAGHIIETfgnfvvggnlivglvvflil  129
            L FS FPS+LL+TTL+RL+++I+TTRL+LLQ DAG+I+E+FG+FVVGGNL VG+++F I+
Sbjct  66   LEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTII  125

Query  130  TIVQFVVITKGAERVAEVAARFSLDAMPGKQMSIDADLRAGTIDMDEARRRRRTVEKESQ  189
            T+VQF+VITKG+ERVAEV+ARFSLD+MPGKQMSID+D+RAG+ID  EA+R R  V+KES+
Sbjct  126  TVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESR  185

Query  190  LYGAMDGAMKFVKGDAIAGLIIvavnllggmlvgvlqrglSAGEAVQTYAILTIGDGLIA  249
            L+GAMDGAMKFVKGDAIAG+I++ +N++GG+ +GV+Q+ +SA EA++TYA+L+IGDGL A
Sbjct  186  LFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCA  245

Query  250  QIPALFIAICAGIIVTRVQTGDGPSNVGTDIGAQVLAQPRALVIAGAISAGLGLIPGMPT  309
            QIP+L+I+I AGIIVTRV  G    +++ +++ QV  QP AL +A+AI + ++L+PG P 
Sbjct  246  QIPSLLISITAGIIVTRV-PGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPF  304

Query  310  LVFFALAAAVGTIGFVLLRASQRPPEGAEPALAGMAADGQPRTRAPADGQAEFAPTVPLI  369
            L+F++LAAAV++ +F+L R ++R ++++ +   G + +G       A GQ   + +VPL+
Sbjct  305  LIFITLAAAVAAPAFLLYRKNRRISQDGRA--NGGSEEG------GATGQRMTPGAVPLM  356

Query  370  IDVAARLQPRFEPATLTDDLLQIRRALYFDLGVPFPGIQLRFTEALAANTYTIVLSEIPV  429
            ++ A+ L+     + L  D+  +R+  + +LGVP+P +++R   +LA NT ++ + +  V
Sbjct  357  LHCASNLH----HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERV  412

Query  430  AQGMLRDDAVLV-RDTEQNLQALRIAYETGAAFLPDTPTIWVAASLTGALRDAGIPYL-G  487
             + +L  D++L+ R     +   ++     ++F       W+ A  +   R  GIPY+ G
Sbjct  413  LEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSF------DWLDAKQAMQARTLGIPYVEG  466

Query  488  ISQILTWHLAYVLKKYSTDFIGIQETRFLLSAMEERFPDLVKECLRVMPVQKIAEILQRL  547
              +I+T  L+ V+ +Y+++FIG+QETR+L+ AME R+ +LVKE  R +PV K+AEILQRL
Sbjct  467  HQRIIT-CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  548  VSEEVSIRNLRAVLEALVEWGQKEKDTVLLTEYVRIALKRYISHKYTSGHNILPAYLLAP  607
            V E++SIR+LR+++ ALV W+ KEKD V+LTEYVRIAL+R + ++++     ++   L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  608  KVEETVRAAIRQTAAGSYLALDPDTTRRLVEHIRQCVGDLAAGASRPVLLTSMDIRRYTR  667
             VE+ +R +IRQT++G+Y AL+   +  +++ I++  ++       +VLLT++D+RR+ R
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVRRFVR  641

Query  668  KMIEADLYALPVLSYQELTPEINVQPLGRVDL  699
            K+IE DL+ LPVLS QEL  E+N++  G ++L
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

83) bcrD in NC_019382


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  413 bits (1555),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 328/692 (48%), Positives = 511/692 (74%), Gaps = 26/692 (3%)

Query  10   LQRAVALATSRNDivlavlivaivFMMILPLPTTLVDVLIGANMTLSAVLLMVAMYlpsp  69
            L R++++ T+R+DI LAV+++  VFMMILPLPTT+VD+LI+ N+++S +LLM+++YL  P
Sbjct  6    LVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDP  65

Query  70   lafssfpsvllvTTLFRLGISIATTRLILLQGDAGHIIETfgnfvvggnlivglvvflil  129
            L FS FPS+LL+TTL+RL+++I+TTRL+LLQ DAG+I+E+FG+FVVGGNL VG+++F I+
Sbjct  66   LEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTII  125

Query  130  TIVQFVVITKGAERVAEVAARFSLDAMPGKQMSIDADLRAGTIDMDEARRRRRTVEKESQ  189
            T+VQF+VITKG+ERVAEV+ARFSLD+MPGKQMSID+D+RAG+ID  EA+R R  V+KES+
Sbjct  126  TVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESR  185

Query  190  LYGAMDGAMKFVKGDAIAGLIIvavnllggmlvgvlqrglSAGEAVQTYAILTIGDGLIA  249
            L+GAMDGAMKFVKGDAIAG+I++ +N++GG+ +GV+Q+ +SA EA++TYA+L+IGDGL A
Sbjct  186  LFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCA  245

Query  250  QIPALFIAICAGIIVTRVQTGDGPSNVGTDIGAQVLAQPRALVIAGAISAGLGLIPGMPT  309
            QIP+L+I+I AGIIVTRV  G    +++ +++ QV  QP AL +A+AI + ++L+PG P 
Sbjct  246  QIPSLLISITAGIIVTRV-PGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPF  304

Query  310  LVFFALAAVVGTIGFVLLRASQRPPEGAGPALAGMAADGQPRTRAPADGQAEFAPTVPLI  369
            L+F++LAA V++ +F+L R ++R +++ G A +G   +G       A GQ   + +VPL+
Sbjct  305  LIFITLAAAVAAPAFLLYRKNRRISQD-GRANGGSEEGG-------ATGQRMTPGAVPLM  356

Query  370  IDVAARLQPRFEPATLTDDLLQIRRALYFDLGVPFPGIQLRFTEALAANTYTIVLSEIPV  429
            ++ A+ L+     + L  D+  +R+  + +LGVP+P +++R   +LA NT ++ + +  V
Sbjct  357  LHCASNLH----HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERV  412

Query  430  AQGMLRDDAVLV-RDTEQNLQALRIAYETGAAFLPDTPTIWVAASLTGALRDAGIPYL-G  487
             + +L  D++L+ R     +   ++     ++F       W+ A  +   R  GIPY+ G
Sbjct  413  LEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSF------DWLDAKQAMQARTLGIPYVEG  466

Query  488  ISQILTWHLAYVLKKYSADFIGIQETRFLLSAMEERFPDLVKECLRVMPVQKIAEILQRL  547
              +I+T  L+ V+ +Y+A+FIG+QETR+L+ AME R+ +LVKE  R +PV K+AEILQRL
Sbjct  467  HQRIIT-CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  548  VSEEVSIRNLRAVLEALVEWGQKEKDTVLLTEYVRIALKRYISYKYTSGHNILPAYLLAP  607
            V E++SIR+LR+++ ALV W+ KEKD V+LTEYVRIAL+R +  +++     ++   L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  608  KVEETVRAAIRQTAAGSYLALDPDTTRRLVEHIRQCVGDLAAGASRPVLLTSMDIRRYTR  667
             VE+ +R +IRQT++G+Y AL+   +  +++ I++  ++       +VLLT++D+RR+ R
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVRRFVR  641

Query  668  KMIEADLYALPVLSYQELTPEINVQPLGRVDL  699
            K+IE DL+ LPVLS QEL  E+N++  G ++L
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

84) bcrD in NC_002927


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  413 bits (1554),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 328/692 (48%), Positives = 511/692 (74%), Gaps = 26/692 (3%)

Query  10   LQRAVALATSRNDivlavlivaivFMMILPLPTTLVDVLIGANMTLSAVLLMVAMYlpsp  69
            L R++++ T+R+DI LAV+++  VFMMILPLPTT+VD+LI+ N+++S +LLM+++YL  P
Sbjct  6    LVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDP  65

Query  70   lafssfpsvllvTTLFRLGISIATTRLILLQGDAGHIIETfgnfvvggnlivglvvflil  129
            L FS FPS+LL+TTL+RL+++I+TTRL+LLQ DAG+I+E+FG+FVVGGNL VG+++F I+
Sbjct  66   LEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTII  125

Query  130  TIVQFVVITKGAERVAEVAARFSLDAMPGKQMSIDADLRAGTIDMDEARRRRRTVEKESQ  189
            T+VQF+VITKG+ERVAEV+ARFSLD+MPGKQMSID+D+RAG+ID  EA+R R  V+KES+
Sbjct  126  TVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESR  185

Query  190  LYGAMDGAMKFVKGDAIAGLIIvavnllggmlvgvlqrglSAGEAVQTYAILTIGDGLIA  249
            L+GAMDGAMKFVKGDAIAG+I++ +N++GG+ +GV+Q+ +SA EA++TYA+L+IGDGL A
Sbjct  186  LFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCA  245

Query  250  QIPALFIAICAGIIVTRVQTGDGPSNVGTDIGAQVLAQPRALVIAGAISAGLGLIPGMPT  309
            QIP+L+I+I AGIIVTRV  G    +++ +++ QV  QP AL +A+AI + ++L+PG P 
Sbjct  246  QIPSLLISITAGIIVTRV-PGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPF  304

Query  310  LVFFALAAVVGTIGFVLLRASQRPPEGAGPALAGMAADGLPRTRAPADGQAEFAPTVPLI  369
            L+F++LAA V++ +F+L R ++R +++ G A +G   +G       A GQ   + +VPL+
Sbjct  305  LIFITLAAAVAAPAFLLYRKNRRISQD-GRANGGSEEGG-------ATGQRMTPGAVPLM  356

Query  370  IDVAARLQPRFEPATLTDDLLQIRRALYFDLGVPFPGIQLRFTEALAANTYTIVLSEIPV  429
            ++ A+ L+     + L  D+  +R+  + +LGVP+P +++R   +LA NT ++ + +  V
Sbjct  357  LHCASNLH----HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERV  412

Query  430  AQGMLRDDAVLV-RDTEQNLQALRIAYETGAAFLPDTPTIWVAASLTGALRDAGIPYL-G  487
             + +L  D++L+ R     +   ++     ++F       W+ A  +   R  GIPY+ G
Sbjct  413  LEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSF------DWLDAKQAMQARTLGIPYVEG  466

Query  488  ISQILTWHLAYVLKKYSADFIGIQETRFLLSAMEERFPDLVKECLRVMPVQKIAEILQRL  547
              +I+T  L+ V+ +Y+A+FIG+QETR+L+ AME R+ +LVKE  R +PV K+AEILQRL
Sbjct  467  HQRIIT-CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  548  VSEEVSIRNLRAVLEALVEWGQKEKDTVLLTEYVRIALKRYISYKYTSGHNILPAYLLAP  607
            V E++SIR+LR+++ ALV W+ KEKD V+LTEYVRIAL+R +  +++     ++   L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  608  KVEETVRAAIRQTAAGSYLALDPDTTRRLVEHIRQCVGDLAAGASRPVLLTSMDIRRYTR  667
             VE+ +R +IRQT++G+Y AL+   +  +++ I++  ++       +VLLT++D+RR+ R
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVRRFVR  641

Query  668  KMIEADLYALPVLSYQELTPEINVQPLGRVDL  699
            K+IE DL+ LPVLS QEL  E+N++  G ++L
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

85) bcrD in NC_018828


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  413 bits (1555),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 328/692 (48%), Positives = 511/692 (74%), Gaps = 26/692 (3%)

Query  10   LQRAVALATSRNDivlavlivaivFMMILPLPTTLVDVLIGANMTLSAVLLMVAMYlpsp  69
            L R++++ T+R+DI LAV+++  VFMMILPLPTT+VD+LI+ N+++S +LLM+++YL  P
Sbjct  6    LVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDP  65

Query  70   lafssfpsvllvTTLFRLGISIATTRLILLQGDAGHIIETfgnfvvggnlivglvvflil  129
            L FS FPS+LL+TTL+RL+++I+TTRL+LLQ DAG+I+E+FG+FVVGGNL VG+++F I+
Sbjct  66   LEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTII  125

Query  130  TIVQFVVITKGAERVAEVAARFSLDAMPGKQMSIDADLRAGTIDMDEARRRRRTVEKESQ  189
            T+VQF+VITKG+ERVAEV+ARFSLD+MPGKQMSID+D+RAG+ID  EA+R R  V+KES+
Sbjct  126  TVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESR  185

Query  190  LYGAMDGAMKFVKGDAIAGLIIvavnllggmlvgvlqrglSAGEAVQTYAILTIGDGLIA  249
            L+GAMDGAMKFVKGDAIAG+I++ +N++GG+ +GV+Q+ +SA EA++TYA+L+IGDGL A
Sbjct  186  LFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCA  245

Query  250  QIPALFIAICAGIIVTRVQTGDGPSNVGTDIGAQVLAQPRALVIAGAISAGLGLIPGMPT  309
            QIP+L+I+I AGIIVTRV  G    +++ +++ QV  QP AL +A+AI + ++L+PG P 
Sbjct  246  QIPSLLISITAGIIVTRV-PGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPF  304

Query  310  LVFFALAAVVGTIGFVLLRASQRPPEGAGPALAGMAADGQPRTRAPADGQAEFAPTVPLI  369
            L+F++LAA V++ +F+L R ++R +++ G A +G   +G       A GQ   + +VPL+
Sbjct  305  LIFITLAAAVAAPAFLLYRKNRRISQD-GRANGGSEEGG-------ATGQRMTPGAVPLM  356

Query  370  IDVAARLQPRFEPATLTDDLLQIRRALYFDLGVPFPGIQLRFTEALAANTYTIVLSEIPV  429
            ++ A+ L+     + L  D+  +R+  + +LGVP+P +++R   +LA NT ++ + +  V
Sbjct  357  LHCASNLH----HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERV  412

Query  430  AQGMLRDDAVLV-RDTEQNLQALRIAYETGAAFLPDTPTIWVTASLTGALRDAGIPYL-G  487
             + +L  D++L+ R     +   ++     ++F       W+ A  +   R  GIPY+ G
Sbjct  413  LEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSF------DWLDAKQAMQARTLGIPYVEG  466

Query  488  ISQILTWHLAYVLKKYSADFIGIQETRFLLSAMEERFPDLVKECLRVMPVQKIAEILQRL  547
              +I+T  L+ V+ +Y+A+FIG+QETR+L+ AME R+ +LVKE  R +PV K+AEILQRL
Sbjct  467  HQRIIT-CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  548  VSEEVSIRNLRAVLEALVEWGQKEKDTVLLTEYVRIALKRYISYKYTSGHNILPAYLLAP  607
            V E++SIR+LR+++ ALV W+ KEKD V+LTEYVRIAL+R +  +++     ++   L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  608  KVEETVRAAIRQTAAGSYLALDPDTTRRLVEHIRQCVGDLAAGASRPVLLTSMDIRRYTR  667
             VE+ +R +IRQT++G+Y AL+   +  +++ I++  ++       +VLLT++D+RR+ R
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVRRFVR  641

Query  668  KMIEADLYALPVLSYQELTPEINVQPLGRVDL  699
            K+IE DL+ LPVLS QEL  E+N++  G ++L
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

86) ECH74115_5063 in NC_011353


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  412 bits (1552),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 310/642 (49%), Positives = 485/642 (76%), Gaps = 7/642 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPfsaalslfsvlsvGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+   A++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMLVMAIIPGFPalvflflavcllGIAWKL--QKKRTFGTG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPlilnlssniyssDITQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ +SN+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKT  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+++   +    +
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHLTGMDVYATTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKELQ  509
            +Q +   T    Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKELQ
Sbjct  451  KQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQ  510

Query  510  RQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILGR  569
            RQ+ ++K+ +ILQRLVEEN+SIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  R
Sbjct  511  RQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRR  570

Query  570  YSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVI  629
            +S + T ++V  +G ++E+ +R+SIRQTSSG+Y  +   ++  I+  +KN      ++V+
Sbjct  571  FSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVL  630

Query  630  LTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  631  LTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

87) escV in NC_002655


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  412 bits (1552),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 310/642 (49%), Positives = 485/642 (76%), Gaps = 7/642 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPfsaalslfsvlsvGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+   A++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMLVMAIIPGFPalvflflavcllGIAWKL--QKKRTFGTG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPlilnlssniyssDITQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ +SN+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKT  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+++   +    +
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHLTGMDVYATTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKELQ  509
            +Q +   T    Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKELQ
Sbjct  451  KQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQ  510

Query  510  RQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILGR  569
            RQ+ ++K+ +ILQRLVEEN+SIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  R
Sbjct  511  RQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRR  570

Query  570  YSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVI  629
            +S + T ++V  +G ++E+ +R+SIRQTSSG+Y  +   ++  I+  +KN      ++V+
Sbjct  571  FSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVL  630

Query  630  LTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  631  LTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

88) ECs4569 in NC_002695


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  412 bits (1552),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 310/642 (49%), Positives = 485/642 (76%), Gaps = 7/642 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPfsaalslfsvlsvGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+   A++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMLVMAIIPGFPalvflflavcllGIAWKL--QKKRTFGTG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPlilnlssniyssDITQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ +SN+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKT  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+++   +    +
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHLTGMDVYATTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKELQ  509
            +Q +   T    Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKELQ
Sbjct  451  KQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQ  510

Query  510  RQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILGR  569
            RQ+ ++K+ +ILQRLVEEN+SIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  R
Sbjct  511  RQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRR  570

Query  570  YSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVI  629
            +S + T ++V  +G ++E+ +R+SIRQTSSG+Y  +   ++  I+  +KN      ++V+
Sbjct  571  FSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVL  630

Query  630  LTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  631  LTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

89) escV in NC_013008


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  412 bits (1552),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 310/642 (49%), Positives = 485/642 (76%), Gaps = 7/642 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPfsaalslfsvlsvGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+   A++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMLVMAIIPGFPalvflflavcllGIAWKL--QKKRTFGTG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPlilnlssniyssDITQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ +SN+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKT  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+++   +    +
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHLTGMDVYATTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKELQ  509
            +Q +   T    Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKELQ
Sbjct  451  KQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQ  510

Query  510  RQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILGR  569
            RQ+ ++K+ +ILQRLVEEN+SIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  R
Sbjct  511  RQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRR  570

Query  570  YSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVI  629
            +S + T ++V  +G ++E+ +R+SIRQTSSG+Y  +   ++  I+  +KN      ++V+
Sbjct  571  FSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVL  630

Query  630  LTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  631  LTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

90) escV in NC_013941


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  412 bits (1552),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 310/642 (49%), Positives = 485/642 (76%), Gaps = 7/642 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPfsaalslfsvlsvGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+   A++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMLVMAIIPGFPalvflflavcllGIAWKL--QKKRTFGTG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPlilnlssniyssDITQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ +SN+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKT  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+++   +    +
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHLTGMDVYATTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKELQ  509
            +Q +   T    Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKELQ
Sbjct  451  KQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQ  510

Query  510  RQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILGR  569
            RQ+ ++K+ +ILQRLVEEN+SIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  R
Sbjct  511  RQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRR  570

Query  570  YSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVI  629
            +S + T ++V  +G ++E+ +R+SIRQTSSG+Y  +   ++  I+  +KN      ++V+
Sbjct  571  FSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVL  630

Query  630  LTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  631  LTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

91) ECO55CA74_21230 in NC_017656


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  412 bits (1552),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 310/642 (49%), Positives = 485/642 (76%), Gaps = 7/642 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPfsaalslfsvlsvGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+   A++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMLVMAIIPGFPalvflflavcllGIAWKL--QKKRTFGTG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPlilnlssniyssDITQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ +SN+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKT  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+++   +    +
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHLTGMDVYATTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKELQ  509
            +Q +   T    Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKELQ
Sbjct  451  KQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQ  510

Query  510  RQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILGR  569
            RQ+ ++K+ +ILQRLVEEN+SIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  R
Sbjct  511  RQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRR  570

Query  570  YSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVI  629
            +S + T ++V  +G ++E+ +R+SIRQTSSG+Y  +   ++  I+  +KN      ++V+
Sbjct  571  FSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVL  630

Query  630  LTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  631  LTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

92) CDCO157_4304 in NC_017906


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  412 bits (1552),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 310/642 (49%), Positives = 485/642 (76%), Gaps = 7/642 (1%)

Query  33   PLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLIL  92
            PLPT +VD++IAIN++ +++LLM+SIY+++PLE++ FP++LLITTL RL+L++STTRL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  93   LHHDAGDIIYSfgnfvvggnivvglvifTIITIVQFMVITKGAERVAEVSARFSLDGMPG  152
            L+HDAG+I+ +FG+FVVGGN+ VG++IFTIIT+VQF+VITKG+ERVAEVSARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  153  KQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFG  212
            KQMSIDGDMRAG ID++EAK LR RVQKES+++G+MDGAMKFVKGDAIAGII++L+N++G
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  213  GVLIGMWQFDMPfsaalslfsvlsvGDALVAQIPALIISVTAGVVVTRVPGESEKEENLA  272
            G+ IG+ Q  M+   A++ ++VLS+GD+L AQIP+L+IS+TAG++VTRVPG   + ++LA
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG--SNKQSLA  272

Query  273  GDIVQQVSVNSRPFLISAALMLVMAIIPGFPalvflflavcllGIAWKL--QKKRTFGTG  330
             ++  QV+ ++ ++ ++AA++ V A++PGFP L+F+ LA  + + A  L  +++R    G
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  331  NNKDAMGADLSNSQNISPGAEPlilnlssniyssDITQQIEVMRWNFFEESGIPLPKIIV  390
              +++   + + +Q ++PGA PL+L+ +SN+  +++ ++I+ +RW  FE+ G+PLP + +
Sbjct  333  RANGGSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEI  392

Query  391  NPVKN-NDSAIEFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKT  449
                   ++++   +YQE +    L  D++ +    + +  +  ++ L+++   +    +
Sbjct  393  RCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTN--NQVLGAKMGSFDWLDA  450

Query  450  NQQLAHLTGMDVYATTNDKITFLLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKELQ  509
            +Q +   T    Y   +++I   L ++    + EFIGVQETRYLMD ME +Y ELVKELQ
Sbjct  451  KQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQ  510

Query  510  RQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILGR  569
            RQ+ ++K+ +ILQRLVEEN+SIRDLRTIF +L+ W+ KEKD+V+L EYVRIALRRH+  R
Sbjct  511  RQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRR  570

Query  570  YSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVI  629
            +S + T ++V  +G ++E+ +R+SIRQTSSG+Y  +   ++  I+  +KN      ++V+
Sbjct  571  FSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQDAVL  630

Query  630  LTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTVN  671
            LT+LD+RR+V+K+IE  +  +PVLS QE+G++++LKV GT++
Sbjct  631  LTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIE  672

93) VEA_003372 in NC_013456


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  407 bits (1533),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 312/706 (45%), Positives = 508/706 (72%), Gaps = 38/706 (5%)

Query  2    NKLIDILNKVGQRKDIMLAVMLLAIVFMMILPLPTALVDVLIGTNMSIAVVLLMLAIYIT  61
            + L+  L  +  R+DI LAVMLL  VFMMILPLPT++VD+LI+ N++++V+LLM++IY+ 
Sbjct  4    SALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLR  63

Query  62   TPLEFSAFPAVllittlfrlslsitttrlillQGDAGQIVYtfgnfvvggnlvvgivvfl  121
             PLEFS FP++LLITTL+RL+L+I+TTRL+LLQ DAG+IV +FG+FVVGGNL VG+++F 
Sbjct  64   DPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFT  123

Query  122  iitivQFMVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVHEARHRRSLIEKE  181
            IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID  EA++ R  ++KE
Sbjct  124  IITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKE  183

Query  182  SQMYGSMDGAMKFVKGDSIAglviivvnilggvtigvtQKGMSASEALELFAILTVGDGL  241
            S+++G+MDGAMKFVKGD+IAG+++I++NI+GG+TIGV Q  MSA EA++ +A+L++GDGL
Sbjct  184  SRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGL  243

Query  242  VSQIPALFIAITAGIIVTRVSHEDSSDLGSDIGGQVIAQPRALLIGGVLLVLFALIPGFP  301
             +QIP+L+I+ITAGIIVTRV+  +   L+++++ QV  QP AL +++ +L +FAL+PGFP
Sbjct  244  CAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP  303

Query  302  KITFLVLATVVGGGGFFLFYQQKKQAASDTTDLSSFVSQgagspaakpskpTPSRNSKGK  361
             + F+ LA+ V++ +F+L Y+++++ + D                        + +  G 
Sbjct  304  FLIFITLAAAVAAPAFLL-YRKNRRISQDGRA-------------------NGGSEEGGA  343

Query  362  LGEQEEFAMTVPLLIDLDASLQESLEAVALNEELARVRRALYLDLGVPFPGIHLRFNEGM  421
             G++   + +VPL+++  ++L+++     L  ++  +R+  + +LGVP+P +++R +  +
Sbjct  344  TGQRMT-PGAVPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL  398

Query  422  QNGEYLIQLQEVPVARGRIVKDQLLVTEGNEQIDLLGVPYEQDEDFLPGISSI-WVAQSY  480
             +    +Q+ +  V    +  D LL+T     +        +++ + + ++S+ W+    
Sbjct  399  AENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVLGAKMGSFDWLDAKQ  452

Query  481  EQKLTTSHVGFL-TPDRILTYHLSHVLKEYAQDFIGIQETRYLLEQMEGSYSELVKEAQR  539
              +  T  + ++   +RI+T  L++V+  Y+ +FIG+QETRYL++ MEG Y+ELVKE QR
Sbjct  453  AMQARTLGIPYVEGHQRIITC-LTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQR  511

Query  540  IVPLQKMTEILQRLVSEDISIRNLRVILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKY  599
             +P+ K++EILQRLV E+ISIR+LR I+ A+V W+ KEKD+V LTEY+R +L+R +C ++
Sbjct  512  QIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRF  571

Query  600  ASGQNMLPAYLLDQSLEDTIRSGIRQTSAGSYLALDPSVTQQFVSDVKQTIGDLSRMPNK  659
            +  +  ++   L++++E+ IR +IRQTS+G+Y AL+   +  +++ +K+++++     + 
Sbjct  572  SHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQD  627

Query  660  PVLVVSMDVRRYVRKLIESEYYDLPVLSFQELTQQINIQPLGRVGM  705
            +VL+ ++DVRR+VRK+IE + + LPVLS QEL +++N++  G + +
Sbjct  628  AVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

94) lcrD in NC_015717


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  407 bits (1533),  Expect = 9e-115, Method: Compositional matrix adjust.
 Identities = 289/659 (44%), Positives = 460/659 (70%), Gaps = 28/659 (4%)

Query  40   DMLQALNLTISAILLMVAVYIKSPLAFVSFPsllllttlfrlslGIASTRLILLEANAGD  99
            D+L A+NL++S ILLM+++Y++ PL F  FPSLLL+TTL+RL+L I++TRL+LL+ +AG+
Sbjct  42   DLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGE  101

Query  100  IITTFGNFVVAGNLVVGAVIFLIITIVQFIVITKGSERVAEVAARFSLDAMPGKQMSIDG  159
            I+ +FG+FVV+GNL VG +IF IIT+VQFIVITKGSERVAEV+ARFSLD+MPGKQMSIDG
Sbjct  102  IVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDG  161

Query  160  DMRAGTIDMNEARRRRGMVEKESQLYGAMDGAMKFVKGDaiagligiavnllggiaigag  219
            DMRAG+ID  EA+R R  V+KES+L+GAMDGAMKFVKGDAIAG+I I +N++GGI+IG  
Sbjct  162  DMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVM  221

Query  220  qlgMSVSDAVNTYSILTIGDGLVGQIPGLFTSITAGFIVTRVSSEEAGTNLGDEIGGEVT  279
            Q  MS  +A+NTY++L+IGDGL +QIP+L+ SITAG+IVTRV++ +  + L++E++ +V 
Sbjct  222  QHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQS-LANELAVQVG  280

Query  280  AQPKALMVASSILVIFAVIPGFPTTIFLALAVLSGGGGYMLHRQATMPKQDGDPFSANLP  339
             QP AL +A++IL +FA++PGFP  IF++LA   ++ +++L R+     QDG +      
Sbjct  281  RQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----N  335

Query  340  AASASGGTPTVRRAGNDADDFSLTVPVMVDVGTDVQTLIRPDALNDTLAQVRRALYYDLG  399
            ++S  GG+   R +         +VP+M++ +++++   +P+ L   +  +R+  + +LG
Sbjct  336  GGSEEGGATGQRMTPG-------AVPLMLHCASNLH---HPH-LGRDIDGLRWRWFEHLG  384

Query  400  VPFPGINLRLNDRYNGGRYVILLNEVPCGEGHMRS-GFLLARDSVENLSLLGIPNETDKP  458
            VP+P +++R +         + + +    E  + + ++LL+R     ++   +      +
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGS  444

Query  459  FLPLIETIWVAQEHRPALEAGSVSFMEPAQLLSYHIGHVLRRYAEEFIGIQETRFLLSRM  518
            F       W+   +     + +++++E  Q +   + +V+ RY+ EFIG+QETR+L+  M
Sbjct  445  F------DWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAM  498

Query  519  EERFPELVKEVQRIVPLQRIAEILQRLVSEGVSVRNMRAILTALIDWGQKEKDVVLLTEH  578
            E R+ ELVKE+QR +P+ ++AEILQRLV E +S+R++R+I+ AL+ W+ KEKD+V+LTE 
Sbjct  499  EGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEY  558

Query  579  IRGALKRQICYRHSSGLNILPAYVVTPELEDTVRNAVRQTSSGSYLALDPRTTRQIIEKv  638
            +R AL+R++C R S     ++   +   +E+ +R+++RQTSSG+Y AL+ R +  I++K 
Sbjct  559  VRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK-  617

Query  639  qgalggvgqqaRKPVLLTAMDIRRYVKKIVEGDCPDLPVLSYQELTPEITVQPLARVSL  697
               +     + + +VLLT++D+RR+V+KI+E D   LPVLS QEL  E+ ++  + + L
Sbjct  618  ---IKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

95) bcrD in NC_002928


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  400 bits (1506),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 321/677 (48%), Positives = 501/677 (75%), Gaps = 26/677 (3%)

Query  10   LQRAVALATSRNDivlavlivaivFMMILPLPTTLVDVLIGANMTLSAVLLMVAMYlpsp  69
            L R++++ T+R+DI LAV+++  VFMMILPLPTT+VD+LI+ N+++S +LLM+++YL  P
Sbjct  6    LVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDP  65

Query  70   lafssfpsvllvTTLFRLGISIATTRLILLQGDAGHIIETfgnfvvggnlivglvvflil  129
            L FS FPS+LL+TTL+RL+++I+TTRL+LLQ DAG+I+E+FG+FVVGGNL VG+++F I+
Sbjct  66   LEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTII  125

Query  130  TIVQFVVITKGAERVAEVAARFSLDAMPGKQMSIDADLRAGTIDMDEARRRRRTVEKESQ  189
            T+VQF+VITKG+ERVAEV+ARFSLD+MPGKQMSID+D+RAG+ID  EA+R R  V+KES+
Sbjct  126  TVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESR  185

Query  190  LYGAMDGAMKFVKGDAIAGLIIvavnllggmlvgvlqrglSAGEAVQTYAILTIGDGLIA  249
            L+GAMDGAMKFVKGDAIAG+I++ +N++GG+ +GV+Q+ +SA EA++TYA+L+IGDGL A
Sbjct  186  LFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCA  245

Query  250  QIPALFIAICAGIIVTRVQTGDGPSNVGTDIGAQVLAQPRALVIAGAISAGLGLIPGMPT  309
            QIP+L+I+I AGIIVTRV  G    +++ +++ QV  QP AL +A+AI + ++L+PG P 
Sbjct  246  QIPSLLISITAGIIVTRV-PGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPF  304

Query  310  LVFFALAAVVGTIGFVLLRASQRPPEGAGPALAGMAADGQPRTRAPADGQAEFAPTVPLI  369
            L+F++LAA V++ +F+L R ++R +++ G A +G   +G       A GQ   + +VPL+
Sbjct  305  LIFITLAAAVAAPAFLLYRKNRRISQD-GRANGGSEEGG-------ATGQRMTPGAVPLM  356

Query  370  IDVAARLQPRFEPATLTDDLLQIRRALYFDLGVPFPGIQLRFTEALAANTYTIVLSEIPV  429
            ++ A+ L+     + L  D+  +R+  + +LGVP+P +++R   +LA NT ++ + +  V
Sbjct  357  LHCASNLH----HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERV  412

Query  430  AQGMLRDDAVLV-RDTEQNLQALRIAYETGAAFLPDTPTIWVAASLTGALRDAGIPYL-G  487
             + +L  D++L+ R     +   ++     ++F       W+ A  +   R  GIPY+ G
Sbjct  413  LEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSF------DWLDAKQAMQARTLGIPYVEG  466

Query  488  ISQILTWHLAYVLKKYSADFIGIQETRFLLSAMEERFPDLVKECLRVMPVQKIAEILQRL  547
              +I+T  L+ V+ +Y+A+FIG+QETR+L+ AME R+ +LVKE  R +PV K+AEILQRL
Sbjct  467  HQRIIT-CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  548  VSEEVSIRNLRAVLEALVEWGQKEKDTVLLTEYVRIALKRYISYKYTSGHNILPAYLLAP  607
            V E++SIR+LR+++ ALV W+ KEKD V+LTEYVRIAL+R +  +++     ++   L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  608  KVEETVRAAIRQTAAGSYLALDPDTTRRLVEYIRQCVGDLAAGASRPVLLTSMDIRRYTR  667
             VE+ +R +IRQT++G+Y AL+   +  +++ I++  ++       +VLLT++D+RR+ R
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVRRFVR  641

Query  668  KMIEADLYALPVLSYRN  684
            K+IE DL+ LPVLS ++
Sbjct  642  KIIERDLFVLPVLSWQE  658

96) VP1662 in NC_004603


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  398 bits (1498),  Expect = 6e-112, Method: Compositional matrix adjust.
 Identities = 310/706 (44%), Positives = 507/706 (72%), Gaps = 38/706 (5%)

Query  5    NKLIDILNKVGQRKDIMLAVMLLAIVFMMILPLPTALVDVLIGANMSIAVVLLMLAIYIT  64
            + L+  L  +  R+DI LAVMLL  VFMMILPLPT++VD+LI+ N++++V+LLM++IY+ 
Sbjct  4    SALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLR  63

Query  65   TPLEFSAFPAVllittlfrlslsitttrlillQGDAGQIVYtfgnfvvggnlvvgivvfl  124
             PLEFS FP++LLITTL+RL+L+I+TTRL+LLQ DAG+IV +FG+FVVGGNL VG+++F 
Sbjct  64   DPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFT  123

Query  125  iitivQFMVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVHEARHRRSLIEKE  184
            IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID  EA++ R  ++KE
Sbjct  124  IITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKE  183

Query  185  SQMYGSMDGAMKFVKGDSIAglviiivnilggvtigvtQKGMSASEALELFAILTVGDGL  244
            S+++G+MDGAMKFVKGD+IAG+++I++NI+GG+TIGV Q  MSA EA++ +A+L++GDGL
Sbjct  184  SRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGL  243

Query  245  VSQIPALFIAITAGIIVTRVSHEDSADLGSDIGGQVTAQPRALLIGGVLLVLFALIPGFP  304
             +QIP+L+I+ITAGIIVTRV+  +   L+++++ QV  QP AL +++ +L +FAL+PGFP
Sbjct  244  CAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP  303

Query  305  KITflvlalvvggggfylfyQQKKQTESESSDLPSFVAQGAGSPAAKPNKPTPSRGSKGK  364
             + F+ LA  V++ +F L+ ++++ ++   ++       G+   +A  ++ TP+      
Sbjct  304  FLIFITLAAAVAAPAFLLYRKNRRISQDGRAN------GGSEEGGATGQRMTPG------  351

Query  365  LGEQEEFAMTVPLLIDLDSSLQESLEAVALNDELARVRRALYLDLGVPFPGIHLRFNDGM  424
                     +VPL+++  S+L+++     L  ++  +R+  + +LGVP+P +++R +  +
Sbjct  352  ---------AVPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL  398

Query  425  KNGEYLIQLQEVPVARGRIEKDKLLVTEGSDQIELLGVPFEQDDDFLPG-VSSL-WVAQS  482
             +    +Q+ +  V    +  D LL+T           ++  +++ L + ++S+ W+   
Sbjct  399  AENTLSVQVYQERVLEVVLPPDSLLLTRPCS-------SLVTNNQVLGAKMGSFDWLDAK  451

Query  483  YQEKLTASHVGFLTPDRILTFHLSHVLKEYAQDFIGIQETRYLLEQMEGSYSELVKEAQR  542
               +  +  + ++  ++ +   L++V+  Y+ +FIG+QETRYL++ MEG Y+ELVKE QR
Sbjct  452  QAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQR  511

Query  543  IVPLQKMTEILQRLVSEDISIRNLRVILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKY  602
             +P+ K++EILQRLV E+ISIR+LR I+ A+V W+ KEKD+V LTEY+R +L+R +C ++
Sbjct  512  QIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRF  571

Query  603  ASGQNMLPAYLLDQSLEDTIRSGIRQTSAGSYLALDPSVTQQFVSDVKQTVGDLSRMPNK  662
            +  +  ++   L++++E+ IR +IRQTS+G+Y AL+   +  +++ +K++ ++     + 
Sbjct  572  SHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQD  627

Query  663  PVLVVSMDVRRYVRKLIESEYYDLPVLSFQELTQQINIQPLGRVGM  708
            +VL+ ++DVRR+VRK+IE + + LPVLS QEL +++N++  G + +
Sbjct  628  AVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

97) VPBB_1522 in NC_019955


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  398 bits (1497),  Expect = 7e-112, Method: Compositional matrix adjust.
 Identities = 310/706 (44%), Positives = 507/706 (72%), Gaps = 38/706 (5%)

Query  2    NKLIDILNKVGQRKDIMLAVMLLAIVFMMILPLPTALVDVLIGANMSIAVVLLMLAIYIT  61
            + L+  L  +  R+DI LAVMLL  VFMMILPLPT++VD+LI+ N++++V+LLM++IY+ 
Sbjct  4    SALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLR  63

Query  62   TPLEFSAFPAVllittlfrlslsitttrlillQGDAGQIVYtfgnfvvggnlvvgivvfl  121
             PLEFS FP++LLITTL+RL+L+I+TTRL+LLQ DAG+IV +FG+FVVGGNL VG+++F 
Sbjct  64   DPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFT  123

Query  122  iitivQFMVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVHEARHRRSLIEKE  181
            IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID  EA++ R  ++KE
Sbjct  124  IITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKE  183

Query  182  SQMYGSMDGAMKFVKGDSIAglviiivnilggvtigvtQKGMSASEALELFAILTVGDGL  241
            S+++G+MDGAMKFVKGD+IAG+++I++NI+GG+TIGV Q  MSA EA++ +A+L++GDGL
Sbjct  184  SRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGL  243

Query  242  VSQIPALFIAITAGIIVTRVSHEDSADLGSDIGGQVTAQPRALLIGGVLLVLFALIPGFP  301
             +QIP+L+I+ITAGIIVTRV+  +   L+++++ QV  QP AL +++ +L +FAL+PGFP
Sbjct  244  CAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP  303

Query  302  KITflvlalvvggggfylfyQQKKQTESESSDLPSFVAQGAGSPAAKPNKPTPSRGSKGK  361
             + F+ LA  V++ +F L+ ++++ ++   ++       G+   +A  ++ TP+      
Sbjct  304  FLIFITLAAAVAAPAFLLYRKNRRISQDGRAN------GGSEEGGATGQRMTPG------  351

Query  362  LGEQEEFAMTVPLLIDLDSSLQESLEAVALNDELARVRRALYLDLGVPFPGIHLRFNDGM  421
                     +VPL+++  S+L+++     L  ++  +R+  + +LGVP+P +++R +  +
Sbjct  352  ---------AVPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL  398

Query  422  KNGEYLIQLQEVPVARGRIEKDKLLVTEGSDQIELLGVPFEQDDDFLPG-VSSL-WVAQS  479
             +    +Q+ +  V    +  D LL+T           ++  +++ L + ++S+ W+   
Sbjct  399  AENTLSVQVYQERVLEVVLPPDSLLLTRPCS-------SLVTNNQVLGAKMGSFDWLDAK  451

Query  480  YQEKLTASHVGFLTPDRILTFHLSHVLKEYAQDFIGIQETRYLLEQMEGSYSELVKEAQR  539
               +  +  + ++  ++ +   L++V+  Y+ +FIG+QETRYL++ MEG Y+ELVKE QR
Sbjct  452  QAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQR  511

Query  540  IVPLQKMTEILQRLVSEDISIRNLRVILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKY  599
             +P+ K++EILQRLV E+ISIR+LR I+ A+V W+ KEKD+V LTEY+R +L+R +C ++
Sbjct  512  QIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRF  571

Query  600  ASGQNMLPAYLLDQSLEDTIRSGIRQTSAGSYLALDPSVTQQFVSDVKQTVGDLSRMPNK  659
            +  +  ++   L++++E+ IR +IRQTS+G+Y AL+   +  +++ +K++ ++     + 
Sbjct  572  SHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQD  627

Query  660  PVLVVSMDVRRYVRKLIESEYYDLPVLSFQELTQQINIQPLGRVGM  705
            +VL+ ++DVRR+VRK+IE + + LPVLS QEL +++N++  G + +
Sbjct  628  AVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

98) M636_13755 in NC_021848


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  398 bits (1496),  Expect = 8e-112, Method: Compositional matrix adjust.
 Identities = 310/706 (44%), Positives = 507/706 (72%), Gaps = 38/706 (5%)

Query  2    NKLIDILNKVGQRKDIMLAVMLLAIVFMMILPLPTALVDVLIGANMSIAVVLLMLAIYIT  61
            + L+  L  +  R+DI LAVMLL  VFMMILPLPT++VD+LI+ N++++V+LLM++IY+ 
Sbjct  4    SALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLR  63

Query  62   TPLEFSAFPAVllittlfrlslsitttrlillQGDAGQIVYtfgnfvvggnlvvgivvfl  121
             PLEFS FP++LLITTL+RL+L+I+TTRL+LLQ DAG+IV +FG+FVVGGNL VG+++F 
Sbjct  64   DPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFT  123

Query  122  iitivQFMVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVHEARHRRSLIEKE  181
            IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID  EA++ R  ++KE
Sbjct  124  IITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKE  183

Query  182  SQMYGSMDGAMKFVKGDSIAglviiivnilggvtigvtQKGMSASEALELFAILTVGDGL  241
            S+++G+MDGAMKFVKGD+IAG+++I++NI+GG+TIGV Q  MSA EA++ +A+L++GDGL
Sbjct  184  SRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGL  243

Query  242  VSQIPALFIAITAGIIVTRVSHEDSADLGSDIGGQVTAQPRALLIGGVLLILFALIPGFP  301
             +QIP+L+I+ITAGIIVTRV+  +   L+++++ QV  QP AL +++ +L +FAL+PGFP
Sbjct  244  CAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP  303

Query  302  KITflvlalvvggggfylfyQQKKQTESESSDLPSFVAQGAGSPAAKPNKPTPSRGSKGK  361
             + F+ LA  V++ +F L+ ++++ ++   ++       G+   +A  ++ TP+      
Sbjct  304  FLIFITLAAAVAAPAFLLYRKNRRISQDGRAN------GGSEEGGATGQRMTPG------  351

Query  362  LGEQEEFAMTVPLLIDLDSSLQESLEAVALNDELARVRRALYLDLGVPFPGIHLRFNDGM  421
                     +VPL+++  S+L+++     L  ++  +R+  + +LGVP+P +++R +  +
Sbjct  352  ---------AVPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL  398

Query  422  KNGEYLIQLQEVPVARGRIEKDKLLVTEGSDQIELLGVPFEQDDDFLPG-VSSL-WVAQS  479
             +    +Q+ +  V    +  D LL+T           ++  +++ L + ++S+ W+   
Sbjct  399  AENTLSVQVYQERVLEVVLPPDSLLLTRPCS-------SLVTNNQVLGAKMGSFDWLDAK  451

Query  480  YQEKLTASHVGFLTPDRILTFHLSHVLKEYAQDFIGIQETRYLLEQMEGSYSELVKEAQR  539
               +  +  + ++  ++ +   L++V+  Y+ +FIG+QETRYL++ MEG Y+ELVKE QR
Sbjct  452  QAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQR  511

Query  540  IVPLQKMTEILQRLVSEDISIRNLRVILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKY  599
             +P+ K++EILQRLV E+ISIR+LR I+ A+V W+ KEKD+V LTEY+R +L+R +C ++
Sbjct  512  QIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRF  571

Query  600  ASGQNMLPAYLLDQSLEDTIRSGIRQTSAGSYLALDPSVTQQFVSDVKQTVGDLSRMPNK  659
            +  +  ++   L++++E+ IR +IRQTS+G+Y AL+   +  +++ +K++ ++     + 
Sbjct  572  SHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQD  627

Query  660  PVLVVSMDVRRYVRKLIESEYYDLPVLSFQELTQQINIQPLGRVGM  705
            +VL+ ++DVRR+VRK+IE + + LPVLS QEL +++N++  G + +
Sbjct  628  AVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

99) M634_09155 in NC_021847


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  398 bits (1496),  Expect = 8e-112, Method: Compositional matrix adjust.
 Identities = 310/706 (44%), Positives = 506/706 (72%), Gaps = 38/706 (5%)

Query  2    NKLIDILNKVGQRKDIMLAVMLLAIVFMMILPLPTALVDVLIGANMSIAVVLLMLAIYIT  61
            + L+  L  +  R+DI LAVMLL  VFMMILPLPT++VD+LI+ N++++V+LLM++IY+ 
Sbjct  4    SALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLR  63

Query  62   TPLEFSAFPAVllittlfrlslsitttrlillQGDAGQIVYtfgnfvvggnlvvgivvfl  121
             PLEFS FP++LLITTL+RL+L+I+TTRL+LLQ DAG+IV +FG+FVVGGNL VG+++F 
Sbjct  64   DPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFT  123

Query  122  iitivQFMVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVHEARHRRSLIEKE  181
            IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID  EA++ R  ++KE
Sbjct  124  IITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKE  183

Query  182  SQMYGSMDGAMKFVKGDSIAglviiivnilggvtigvtQKGMSASEALELFAILTVGDGL  241
            S+++G+MDGAMKFVKGD+IAG+++I++NI+GG+TIGV Q  MSA EA++ +A+L++GDGL
Sbjct  184  SRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGL  243

Query  242  VSQIPALFIAITAGIIVTRVSHEDSADLGSDIGGQVTAQPRALLIGGVLLVLFALIPGFP  301
             +QIP+L+I+ITAGIIVTRV+  +   L+++++ QV  QP AL +++ +L +FAL+PGFP
Sbjct  244  CAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP  303

Query  302  KITflvlalvvggggfylfyQQKKQTESESSDLPSFVAQGAGSPAAKPNKPTPSRGSKGK  361
             + F+ LA  V++ +F L+ ++++ ++   ++       G+   +A  ++ TP+      
Sbjct  304  FLIFITLAAAVAAPAFLLYRKNRRISQDGRAN------GGSEEGGATGQRMTPG------  351

Query  362  LGEQEEFAMTVPLLIDLDSSLQESLEAVALNDELARVRRALYLDLGVPFPGIHLRFNDGM  421
                     +VPL+++  S+L+++     L  ++  +R+  + +LGVP+P +++R +  +
Sbjct  352  ---------AVPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL  398

Query  422  KNGEYLIQLQEVPVARGRIEKDKLLVTEGSDQIELLGVPFEQDDDFLPG-VSSL-WVAQS  479
             +    +Q+ +  V    +  D LL+T           ++  +++ L + ++S+ W+   
Sbjct  399  AENTLSVQVYQERVLEVVLPPDSLLLTRPCS-------SLVTNNQVLGAKMGSFDWLDAK  451

Query  480  YQEKLTASHVGFLTPDRILTFHLSHVLKEYAQDFIGIQETRYLLEQMEGSYSELVKEAQR  539
               +  +  + ++  ++ +   L++V+  Y+ +FIG+QETRYL++ MEG Y+ELVKE QR
Sbjct  452  QAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQR  511

Query  540  IVPLQKMTEILQRLVSEDISIRNLRVILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKY  599
             +P+ K++EILQRLV E+ISIR+LR I+ A+V W+ KEKD+V LTEY+R +L+R +C ++
Sbjct  512  QIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRF  571

Query  600  ASGHNMLPAYLLDQSLEDTIRSGIRQTSAGSYLALDPSVTQQFVSDVKQTVGDLSRMPNK  659
            +     ++   L++++E+ IR +IRQTS+G+Y AL+   +  +++ +K++ ++     + 
Sbjct  572  SHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQD  627

Query  660  PVLVVSMDVRRYVRKLIESEYYDLPVLSFQELTQQINIQPLGRVGM  705
            +VL+ ++DVRR+VRK+IE + + LPVLS QEL +++N++  G + +
Sbjct  628  AVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

100) N646_0730 in NC_022349


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  391 bits (1472),  Expect = 7e-110, Method: Compositional matrix adjust.
 Identities = 308/706 (44%), Positives = 504/706 (72%), Gaps = 38/706 (5%)

Query  2    NKLIDILNKVGQRKDIMLAVMLLAIVFMMILPLPTALVDVLIGTNMSIAVVLLMLAIYIT  61
            + L+  L  +  R+DI LAVMLL  VFMMILPLPT++VD+LI+ N++++V+LLM++IY+ 
Sbjct  4    SALVRGLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLR  63

Query  62   TPLEFSAFPAVllittlfrlslsitttrlillQGDAGQIVYtfgnfvvggnlvvgivvfl  121
             PLEFS FP++LLITTL+RL+L+I+TTRL+LLQ DAG+IV +FG+FVVGGNL VG+++F 
Sbjct  64   DPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFT  123

Query  122  iitivQFMVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVHEARHRRSLIEKE  181
            IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG ID  EA++ R  ++KE
Sbjct  124  IITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKE  183

Query  182  SQMYGSMDGAMKFVKGDSIAglviivvnilggvtigvtQKGMSASEALELFAILTVGDGL  241
            S+++G+MDGAMKFVKGD+IAG+++I++NI+GG+TIGV Q  MSA EA++ +A+L++GDGL
Sbjct  184  SRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGL  243

Query  242  VSQIPALFIAITAGIIVTRVSHEDSSDLGSDIGGQVIAQPRALLIGGVLLVLFALIPGFP  301
             +QIP+L+I+ITAGIIVTRV+  +   L+++++ QV  QP AL +++ +L +FAL+PGFP
Sbjct  244  CAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP  303

Query  302  KITflvlaavvggggfflfYQQKKQAESDSTDLSSFVSQgagspaakpskpTPSRNSKGK  361
             + +++  A   ++  FL+Y+++++   D+                       + +  G 
Sbjct  304  -FLIFITLAAAVAAPAFLLYRKNRRISQDGRA-------------------NGGSEEGGA  343

Query  362  LGEQEEFAMTVPLLIDLDASLQESLEAVALNEELARVRRALYLDLGVPFPGIHLRFNEGM  421
             G++   + +VPL+++  ++L+++     L  ++  +R+  + +LGVP+P +++R +  +
Sbjct  344  TGQRMT-PGAVPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTL  398

Query  422  QNGEYLIQLQEVPVARGRIVKDQLLVTEGNEQIDLLGVPYEQDEDFLPGISSI-WVAQSY  480
             +    +Q+ +  V    +  D LL+T     +        +++ + + ++S+ W+    
Sbjct  399  AENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVLGAKMGSFDWLDAKQ  452

Query  481  EQKLVASHVGFL-TPDRILTYHLSHVLKEYAQDFIGIQETRYLLEQMEGSYSELVKEAQR  539
              +  +  + ++   +RI+T  L++V+  Y+ +FIG+QETRYL++ MEG Y+ELVKE QR
Sbjct  453  AMQARTLGIPYVEGHQRIITC-LTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQR  511

Query  540  IVPLQKMTEILQRLVSEDISIRNLRVILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKY  599
             +P+ K++EILQRLV E+ISIR+LR I+ A+V W+ KEKD+V LTEY+R +L+R +C ++
Sbjct  512  QIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRF  571

Query  600  ASGQNMLPAYLLDQNLEDTIRSGIRQTSAGSYLALDPSVTQQFVSDVKQTIGDLSRMPNK  659
            +  +  ++   L++ +E+ IR +IRQTS+G+Y AL+   +  +++ +K+++++     + 
Sbjct  572  SHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE----NQD  627

Query  660  PVLVVSMDVRRYVRKLIESEYYDLPVLSFQELTQQINIQPLGRVGM  705
            +VL+ ++DVRR+VRK+IE + + LPVLS QEL +++N++  G + +
Sbjct  628  AVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

101) hrpI in NC_013971


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  385 bits (1446),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 279/683 (41%), Positives = 474/683 (70%), Gaps = 28/683 (4%)

Query  18   RSEVVGAAIVMSIVFMMIIPLPTGLIDVLIALNICISSLLIVLAMYLPKPLAFSTFPSVL  77
            R ++  A +++  VFMMI+PLPT ++D+LIA+N+ +S +L+++++YL  PL FS FPS+L
Sbjct  16   RQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLL  75

Query  78   LLTTMFRLALSISTTRQILLQQDAGHIVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITK  137
            L+TT++RLAL+ISTTR +LLQ+DAG+IVEAFG+FVVGGNLAVG++IF I+TVV+F+VITK
Sbjct  76   LITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITK  135

Query  138  GSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMK  197
            GSERVAEV+ARF+LD+MPGKQMSID+D+RAG I++ +A++ RE + KES+LFGAMDGAMK
Sbjct  136  GSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMK  195

Query  198  FVKGDAIAGLVIVFINMIGGFAIGVLQNGMEAGAAMHIYSVLTIGDGLIAQIPALLISLT  257
            FVKGDAIAG+++++IN+IGG++IGV+Q+ M A  AM+ Y+VL+IGDGL AQIP+LLIS+T
Sbjct  196  FVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISIT  255

Query  258  AGMIITRVSADGQQVDANIGREIAEQLTSQPKA-WIMSAAGMLGFALLPGMPTAVFVIIS  316
            AG+I+TRV++  +Q   +++ E+A Q+  QP A W ++AA +  FALLPG P  +F+ ++
Sbjct  256  AGIIVTRVPGSNKQ---SLANELAVQVGRQPDALW-LAAAILTVFALLPGFPFLIFITLA  311

Query  317  AIALGSGLFQLWRIKQQDSQQQADELHAQQLAPEDNGYQDLRRFNPTRAYLLQFSQEHLN  376
            A   ++  F L R +++ SQ+   +      +  ++G    +R  P    L+     +L+
Sbjct  312  AAV-AAPAFLLYRKNRRISQDGRAN------GGSEEGGATGQRMTPGAVPLMLHCASNLH  364

Query  377  SEAAESLIQHIRRLRNRLVYHFGFTLPSFDIEFSPALAADEFRFCVYEIPLVTATFAVEQ  436
                  L ++I  LR R   H+G  LP  +I   P+LA + +   VY+  ++   ++ + 
Sbjct  365  H---PHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS  421

Query  437  LAVRTSSIEIHLADGESDGQIQPGQAERDEHHWCWLPPQHPLLQQE-DRRCWNAQQLIML  495
            L +  +   +      ++ Q+  ++    +    WL +++++  +  +    +++Q I+ 
Sbjct  422  LLLTRPCSSL-----VTNNQVLGAKMGSFD----WLDAKQAMQARTLGIPYVEGHQRIIT  472

Query  496  RMEQAIHQSGAQFIGLQESKSILNWLESEQPELAQELQRIMPLSRFAAVLQRLASERIPL  555
             + + +++  A+FIG+QE++ +++ +E+   EL +ELQR +P+++ A +LQRL  E I++
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  556  RSVRTIAETLIEHGQHERDSAALTDFVRIALKEHICHQYQQPNG-LNVWLLTPETEELLR  614
            R +RTI  +L+  +  E+D   LT++VRIAL+ H+C+++ + +  ++V  L    E+L+R
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  615  DSLRQAQSETFFSLAQEYGINLLNQMRSAFPPYDNHHALILVAQDLRSPLRALLKDEFHA  674
            DS+RQ+ S T+ +L +  ++ +LN++++AF+  +N++A++L + D+R  +R ++  ++  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFV  650

Query  675  VPVLSFAELTSNVAINVLGRLDL  697
            +PVLS  EL  ++ ++V G ++L
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

102) hrcV in NC_013961


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  385 bits (1446),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 279/683 (41%), Positives = 474/683 (70%), Gaps = 28/683 (4%)

Query  18   RSEVVGAAIVMSIVFMMIIPLPTGLIDVLIALNICISSLLIVLAMYLPKPLAFSTFPSVL  77
            R ++  A +++  VFMMI+PLPT ++D+LIA+N+ +S +L+++++YL  PL FS FPS+L
Sbjct  16   RQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLL  75

Query  78   LLTTMFRLALSISTTRQILLQQDAGHIVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITK  137
            L+TT++RLAL+ISTTR +LLQ+DAG+IVEAFG+FVVGGNLAVG++IF I+TVV+F+VITK
Sbjct  76   LITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITK  135

Query  138  GSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMK  197
            GSERVAEV+ARF+LD+MPGKQMSID+D+RAG I++ +A++ RE + KES+LFGAMDGAMK
Sbjct  136  GSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMK  195

Query  198  FVKGDAIAGLVIVFINMIGGFAIGVLQNGMEAGAAMHIYSVLTIGDGLIAQIPALLISLT  257
            FVKGDAIAG+++++IN+IGG++IGV+Q+ M A  AM+ Y+VL+IGDGL AQIP+LLIS+T
Sbjct  196  FVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISIT  255

Query  258  AGMIITRVSADGQQVDANIGREIAEQLTSQPKA-WIMSAAGMLGFALLPGMPTAVFVIIS  316
            AG+I+TRV++  +Q   +++ E+A Q+  QP A W ++AA +  FALLPG P  +F+ ++
Sbjct  256  AGIIVTRVPGSNKQ---SLANELAVQVGRQPDALW-LAAAILTVFALLPGFPFLIFITLA  311

Query  317  AIALGSGLFQLWRIKQQDSQQQADELHAQQLAPEDNGYQDLRRFNPTRAYLLQFSQEHLN  376
            A   ++  F L R +++ SQ+   +      +  ++G    +R  P    L+     +L+
Sbjct  312  AAV-AAPAFLLYRKNRRISQDGRAN------GGSEEGGATGQRMTPGAVPLMLHCASNLH  364

Query  377  SEAAESLIQHIRRLRNRLVYHFGFTLPSFDIEFSPALAADEFRFCVYEIPLVTATFAVEQ  436
                  L ++I  LR R   H+G  LP  +I   P+LA + +   VY+  ++   ++ + 
Sbjct  365  H---PHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS  421

Query  437  LAVRTSSIEIHLADGESDGQIQPGQAERDEHHWCWLPPQHPLLQQE-DRRCWNAQQLIML  495
            L +  +   +      ++ Q+  ++    +    WL +++++  +  +    +++Q I+ 
Sbjct  422  LLLTRPCSSL-----VTNNQVLGAKMGSFD----WLDAKQAMQARTLGIPYVEGHQRIIT  472

Query  496  RMEQAIHQSGAQFIGLQESKSILNWLESEQPELAQELQRIMPLSRFAAVLQRLASERIPL  555
             + + +++  A+FIG+QE++ +++ +E+   EL +ELQR +P+++ A +LQRL  E I++
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  556  RSVRTIAETLIEHGQHERDSAALTDFVRIALKEHICHQYQQPNG-LNVWLLTPETEELLR  614
            R +RTI  +L+  +  E+D   LT++VRIAL+ H+C+++ + +  ++V  L    E+L+R
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  615  DSLRQAQSETFFSLAQEYGINLLNQMRSAFPPYDNHHALILVAQDLRSPLRALLKDEFHA  674
            DS+RQ+ S T+ +L +  ++ +LN++++AF+  +N++A++L + D+R  +R ++  ++  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFV  650

Query  675  VPVLSFAELTSNVAINVLGRLDL  697
            +PVLS  EL  ++ ++V G ++L
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

103) Dvul_3008 in NC_008741


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  384 bits (1445),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 281/664 (43%), Positives = 474/664 (72%), Gaps = 33/664 (4%)

Query  39   TPLVDTLIGANMALSFVMLMMSMYVKSILDFSVFPTMLLFTTLFRVGLNITTTRLILLQA  98
            T +VD LI+ N+A+S ++LM+S+Y++  L+FSVFP++LL+TTL+R++L I+TTRL+LLQ 
Sbjct  38   TTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQH  97

Query  99   DAGEIIFVFGEYalggnfvvgavvfviltivQFLVIAKGAERVAEVGARFTLDAMPGKQM  158
            DAGEI+  FG++ +GGN+ VG ++F I+T+VQF+VI+KG+ERVAEV+ARF+LD+MPGKQM
Sbjct  98   DAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQM  157

Query  159  SIDADMRAGVIDMEEAQRRRNTVSQESQMYGAMDGAMKFVKGDSIAGMIVALVNIVGGTV  218
            SID+DMRAG ID  EA+R R+ V +ES+++GAMDGAMKFVKGD+IAG+IV L+NI+GG  
Sbjct  158  SIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGIT  217

Query  219  IGITQHGMAAGEALHTYGILTIGDGLVSQIPSLLVSISAGILITR-SGDSGGNVGAQIGG  277
            IG+ QH M+A EA++TY++L+IGDGL +QIPSLL+SI+AGI++TR +G +  +++ +++ 
Sbjct  218  IGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAV  277

Query  278  QIFGQPKALLMAGGLVFLFALVPGFPKPQlmglalalggfgYVLRRMAELPAETDPRAEL  337
            Q+  QP AL +A++++ +FAL+PGFP   ++ LA A+++ +++L R              
Sbjct  278  QVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRK-------------  324

Query  338  SRSLAPAVKPRPAR-GGAQQGDDFAP-TVPIILDLSPALGESLDYDSLNDELARLRRALY  395
            +R ++   ++  +   G+  G+  +P +VP++L+ ++    +L+   L  ++  LR+  +
Sbjct  325  NRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCAS----NLHHPHLGRDIDGLRWRWF  380

Query  396  FDLGVPFPGINVRPNPALPGLCYVLNLNEIPMSRGVLEKGMSLVRDTRENLAMMGVAVRE  455
             +LGVP+P +++R +P+L+     +++ +  +   VL  +  L+     +L      V +
Sbjct  381  EHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSL------VTN  434

Query  456  GERFLPEVEPL-WVPDEQCRLLEKAGIGHM-SHARILAYHLSLVLSRHASTFIGMQEAKY  513
             + + + + ++ W+   Q       GI  + +H RI++  L+ V+ R ++ FIG+QE++Y
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITC-LTRVFERYTAEFIGVQETRY  493

Query  514  LLDRMEERAPDLVREVTRLLPVQRIAEIFQRLVQEQVSIRDLRSILEALIEWSAKEKDTV  573
            L+D ME R  +LV+E+ R +PV ++AEI+QRLV+E++SIRDLR+I+ AL+ W++KEKD V
Sbjct  494  LMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIV  553

Query  574  MLTEYVRSALKRQISYMHSRGQNMLPAILLDPGVEETIRKAVRQTSAGAFLALEPAVTER  633
            MLTEYVR AL+R++    S+ +  ++ + L+ GVE+ IR ++RQTS+G++ ALE   +  
Sbjct  554  MLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLL  613

Query  634  FMKAVADAAGPYAQQTQKPVIMTSMDIRRYVRRLIEGDHYTLAVMSYQELTPEISVQPVN  693
            +++ + +A   +A++ Q +V++T++D+RR+VR++IE D + L+V+S QEL  E++++   
Sbjct  614  ILNKIKNA---FAEN-QDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAG  669

Query  694  RIRL  697
             I L
Sbjct  670  TIEL  673

104) DVUA0104 in NC_005863


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  384 bits (1445),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 281/664 (43%), Positives = 474/664 (72%), Gaps = 33/664 (4%)

Query  39   TPLVDTLIGANMALSFVMLMMSMYVKSILDFSVFPTMLLFTTLFRVGLNITTTRLILLQA  98
            T +VD LI+ N+A+S ++LM+S+Y++  L+FSVFP++LL+TTL+R++L I+TTRL+LLQ 
Sbjct  38   TTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQH  97

Query  99   DAGEIIFVFGEYalggnfvvgavvfviltivQFLVIAKGAERVAEVGARFTLDAMPGKQM  158
            DAGEI+  FG++ +GGN+ VG ++F I+T+VQF+VI+KG+ERVAEV+ARF+LD+MPGKQM
Sbjct  98   DAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQM  157

Query  159  SIDADMRAGVIDMEEAQRRRNTVSQESQMYGAMDGAMKFVKGDSIAGMIVALVNIVGGTV  218
            SID+DMRAG ID  EA+R R+ V +ES+++GAMDGAMKFVKGD+IAG+IV L+NI+GG  
Sbjct  158  SIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGIT  217

Query  219  IGITQHGMAAGEALHTYGILTIGDGLVSQIPSLLVSISAGILITR-SGDSGGNVGAQIGG  277
            IG+ QH M+A EA++TY++L+IGDGL +QIPSLL+SI+AGI++TR +G +  +++ +++ 
Sbjct  218  IGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAV  277

Query  278  QIFGQPKALLMAGGLVFLFALVPGFPKPQlmglalalggfgYVLRRMAELPAETDPRAEL  337
            Q+  QP AL +A++++ +FAL+PGFP   ++ LA A+++ +++L R              
Sbjct  278  QVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRK-------------  324

Query  338  SRSLAPAVKPRPAR-GGAQQGDDFAP-TVPIILDLSPALGESLDYDSLNDELARLRRALY  395
            +R ++   ++  +   G+  G+  +P +VP++L+ ++    +L+   L  ++  LR+  +
Sbjct  325  NRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCAS----NLHHPHLGRDIDGLRWRWF  380

Query  396  FDLGVPFPGINVRPNPALPGLCYVLNLNEIPMSRGVLEKGMSLVRDTRENLAMMGVAVRE  455
             +LGVP+P +++R +P+L+     +++ +  +   VL  +  L+     +L      V +
Sbjct  381  EHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSL------VTN  434

Query  456  GERFLPEVEPL-WVPDEQCRLLEKAGIGHM-SHARILAYHLSLVLSRHASTFIGMQEAKY  513
             + + + + ++ W+   Q       GI  + +H RI++  L+ V+ R ++ FIG+QE++Y
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITC-LTRVFERYTAEFIGVQETRY  493

Query  514  LLDRMEERAPDLVREVTRLLPVQRIAEIFQRLVQEQVSIRDLRSILEALIEWSAKEKDTV  573
            L+D ME R  +LV+E+ R +PV ++AEI+QRLV+E++SIRDLR+I+ AL+ W++KEKD V
Sbjct  494  LMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIV  553

Query  574  MLTEYVRSALKRQISYMHSRGQNMLPAILLDPGVEETIRKAVRQTSAGAFLALEPAVTER  633
            MLTEYVR AL+R++    S+ +  ++ + L+ GVE+ IR ++RQTS+G++ ALE   +  
Sbjct  554  MLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLL  613

Query  634  FMKAVADAAGPYAQQTQKPVIMTSMDIRRYVRRLIEGDHYTLAVMSYQELTPEISVQPVN  693
            +++ + +A   +A++ Q +V++T++D+RR+VR++IE D + L+V+S QEL  E++++   
Sbjct  614  ILNKIKNA---FAEN-QDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAG  669

Query  694  RIRL  697
             I L
Sbjct  670  TIEL  673

105) Deval_3200 in NC_017311


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  384 bits (1445),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 281/664 (43%), Positives = 474/664 (72%), Gaps = 33/664 (4%)

Query  39   TPLVDTLIGANMALSFVMLMMSMYVKSILDFSVFPTMLLFTTLFRVGLNITTTRLILLQA  98
            T +VD LI+ N+A+S ++LM+S+Y++  L+FSVFP++LL+TTL+R++L I+TTRL+LLQ 
Sbjct  38   TTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQH  97

Query  99   DAGEIIFVFGEYalggnfvvgavvfviltivQFLVIAKGAERVAEVGARFTLDAMPGKQM  158
            DAGEI+  FG++ +GGN+ VG ++F I+T+VQF+VI+KG+ERVAEV+ARF+LD+MPGKQM
Sbjct  98   DAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQM  157

Query  159  SIDADMRAGVIDMEEAQRRRNTVSQESQMYGAMDGAMKFVKGDSIAGMIVALVNIVGGTV  218
            SID+DMRAG ID  EA+R R+ V +ES+++GAMDGAMKFVKGD+IAG+IV L+NI+GG  
Sbjct  158  SIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGIT  217

Query  219  IGITQHGMAAGEALHTYGILTIGDGLVSQIPSLLVSISAGILITR-SGDSGGNVGAQIGG  277
            IG+ QH M+A EA++TY++L+IGDGL +QIPSLL+SI+AGI++TR +G +  +++ +++ 
Sbjct  218  IGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAV  277

Query  278  QIFGQPKALLMAGGLVFLFALVPGFPKPQlmglalalggfgYVLRRMAELPAETDPRAEL  337
            Q+  QP AL +A++++ +FAL+PGFP   ++ LA A+++ +++L R              
Sbjct  278  QVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRK-------------  324

Query  338  SRSLAPAVKPRPAR-GGAQQGDDFAP-TVPIILDLSPALGESLDYDSLNDELARLRRALY  395
            +R ++   ++  +   G+  G+  +P +VP++L+ ++    +L+   L  ++  LR+  +
Sbjct  325  NRRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCAS----NLHHPHLGRDIDGLRWRWF  380

Query  396  FDLGVPFPGINVRPNPALPGLCYVLNLNEIPMSRGVLEKGMSLVRDTRENLAMMGVAVRE  455
             +LGVP+P +++R +P+L+     +++ +  +   VL  +  L+     +L      V +
Sbjct  381  EHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSL------VTN  434

Query  456  GERFLPEVEPL-WVPDEQCRLLEKAGIGHM-SHARILAYHLSLVLSRHASTFIGMQEAKY  513
             + + + + ++ W+   Q       GI  + +H RI++  L+ V+ R ++ FIG+QE++Y
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITC-LTRVFERYTAEFIGVQETRY  493

Query  514  LLDRMEERAPDLVREVTRLLPVQRIAEIFQRLVQEQVSIRDLRSILEALIEWSAKEKDTV  573
            L+D ME R  +LV+E+ R +PV ++AEI+QRLV+E++SIRDLR+I+ AL+ W++KEKD V
Sbjct  494  LMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIV  553

Query  574  MLTEYVRSALKRQISYMHSRGQNMLPAILLDPGVEETIRKAVRQTSAGAFLALEPAVTER  633
            MLTEYVR AL+R++    S+ +  ++ + L+ GVE+ IR ++RQTS+G++ ALE   +  
Sbjct  554  MLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLL  613

Query  634  FMKAVADAAGPYAQQTQKPVIMTSMDIRRYVRRLIEGDHYTLAVMSYQELTPEISVQPVN  693
            +++ + +A   +A++ Q +V++T++D+RR+VR++IE D + L+V+S QEL  E++++   
Sbjct  614  ILNKIKNA---FAEN-QDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAG  669

Query  694  RIRL  697
             I L
Sbjct  670  TIEL  673

106) sctV in NC_020127


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  383 bits (1440),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 292/694 (43%), Positives = 490/694 (71%), Gaps = 36/694 (5%)

Query  10   TVGVITRNNDITMVLLLVTVIALMIIPLPTPLVDTLIGINMGLSFLIVMMCMYVKTVLDF  69
             + +IT  +DI + ++L+  + +MI+PLPT +VD LI+IN+++S +++M+ +Y++  L+F
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  70   SVFPTMLLFTTLFRVGLNITTTRLILLQADAGEIIFIFGEfalggnfvvgavvfviltiv  129
            SVFP++LL+TTL+R++L I+TTRL+LLQ DAGEI+  FG+F +GGN+ VG ++F I+T+V
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  130  QFLVIAKGAERVAEVGARFTLDAMPGKQMSIDADMRAGVIDMEEAQKRRARINQESQMYG  189
            QF+VI+KG+ERVAEV+ARF+LD+MPGKQMSID+DMRAG ID  EA++ R R+++ES+++G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  190  AMDGAMKFVKGDSIAGMiiavvnivggtiigvTQHGMAASDALHVYGILTIGDGLVSQip  249
            AMDGAMKFVKGD+IAG+I+ ++NI+GG  IGV QH M+A +A++ Y++L+IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  250  sllisiaagiliTR-TGDSAENVGSQIGEQIFNQPKALLMAGGVVFLIALVPGFPKIQLF  308
            SLLISI+AGI++TR  G + ++++++++ Q+  QP AL +A++++ ++AL+PGFP    F
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP----F  304

Query  309  AISATLAGIGYTLKLIMTNPAPKNAKQSIAktlepttspskkssteqkeskeeFSPTVPI  368
             I  TLA+   +  +++     + ++++ A+      +++ +  T         + +VP+
Sbjct  305  LIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMT---------PGAVPL  355

Query  369  ILDISQQMSEELDYDSLNDELITLRRVLYFDLGVPFPGINLRISSKLHDLTYSLMINEIP  428
            +L+ +     +L+   L  ++  LR+  + +LGVP+P +++R  + L + T S+ + +  
Sbjct  356  MLHCA----SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQER  411

Query  429  ITKGTLE-KGMVLARDTKENLAMLGVEPEEKEKFLPDVESLWVPDSKKALLERA-GITCM  486
            +    L   +++L+R     ++   V       F       W+ D+K+A+  R+ GI  +
Sbjct  412  VLEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSFD------WL-DAKQAMQARTLGIPYV  464

Query  487  -THSRILAYHLSLVLSRHASNFLGMQETKYLLDKMEERAPDLVRETTRLLPVQRIAEIFQ  545
              H RI++  L+ V+ R +++F+G+QET+YL+D ME R  +LV+E  R +PV ++AEI+Q
Sbjct  465  EGHQRIITC-LTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  546  RLVQEQISIRDLRSILEALIEWSPKEKDTVMLTEYVRSALKRQISYMYSKGQNMLPAVLL  605
            RLV+E+ISIRDLR+I+ AL+ W+PKEKD VMLTEYVR AL+R++   +S  +  ++ + L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  606  DPNVEETIRKSVRQTSAGAFLALDPETTQIFMASLKE-FASETNLTYTQKPVLITSMDIR  664
            +  VE+ IR S+RQTS+G++ AL+   + +++  +K+ FA +      Q +VL+T++D+R
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAEN------QDAVLLTTLDVR  637

Query  665  RYVRRLIEGDYYNLPVVSYQELTPEISVQPVGRI  698
            R+VR++IE D + LPV+S QEL  E++++  G I
Sbjct  638  RFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

107) yscV in NC_008011


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  383 bits (1440),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 292/694 (43%), Positives = 490/694 (71%), Gaps = 36/694 (5%)

Query  10   TVGVITRNNDITMVLLLVTVIALMIIPLPTPLVDTLIGINMGLSFLIVMMCMYVKTVLDF  69
             + +IT  +DI + ++L+  + +MI+PLPT +VD LI+IN+++S +++M+ +Y++  L+F
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  70   SVFPTMLLFTTLFRVGLNITTTRLILLQADAGEIIFIFGEfalggnfvvgavvfviltiv  129
            SVFP++LL+TTL+R++L I+TTRL+LLQ DAGEI+  FG+F +GGN+ VG ++F I+T+V
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  130  QFLVIAKGAERVAEVGARFTLDAMPGKQMSIDADMRAGVIDMEEAQKRRARINQESQMYG  189
            QF+VI+KG+ERVAEV+ARF+LD+MPGKQMSID+DMRAG ID  EA++ R R+++ES+++G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  190  AMDGAMKFVKGDSIAGMiiavvnivggtiigvTQHGMAASDALHVYGILTIGDGLVSQip  249
            AMDGAMKFVKGD+IAG+I+ ++NI+GG  IGV QH M+A +A++ Y++L+IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  250  sllisiaagiliTR-TGDSAENVGSQIGEQIFNQPKALLMAGGVVFLIALVPGFPKIQLF  308
            SLLISI+AGI++TR  G + ++++++++ Q+  QP AL +A++++ ++AL+PGFP    F
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFP----F  304

Query  309  AISATLAGIGYTLKLIMTNPAPKNAKQSIAktlepttspskkssteqkeskeeFSPTVPI  368
             I  TLA+   +  +++     + ++++ A+      +++ +  T         + +VP+
Sbjct  305  LIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMT---------PGAVPL  355

Query  369  ILDISQQMSEELDYDSLNDELITLRRVLYFDLGVPFPGINLRISSKLHDLTYSLMINEIP  428
            +L+ +     +L+   L  ++  LR+  + +LGVP+P +++R  + L + T S+ + +  
Sbjct  356  MLHCA----SNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQER  411

Query  429  ITKGTLE-KGMVLARDTKENLAMLGVEPEEKEKFLPDVESLWVPDSKKALLERA-GITCM  486
            +    L   +++L+R     ++   V       F       W+ D+K+A+  R+ GI  +
Sbjct  412  VLEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSFD------WL-DAKQAMQARTLGIPYV  464

Query  487  -THSRILAYHLSLVLSRHASNFLGMQETKYLLDKMEERAPDLVRETTRLLPVQRIAEIFQ  545
              H RI++  L+ V+ R +++F+G+QET+YL+D ME R  +LV+E  R +PV ++AEI+Q
Sbjct  465  EGHQRIITC-LTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  546  RLVQEQISIRDLRSILEALIEWSPKEKDTVMLTEYVRSALKRQISYMYSKGQNMLPAVLL  605
            RLV+E+ISIRDLR+I+ AL+ W+PKEKD VMLTEYVR AL+R++   +S  +  ++ + L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  606  DPNVEETIRKSVRQTSAGAFLALDPETTQIFMASLKE-FASETNLTYTQKPVLITSMDIR  664
            +  VE+ IR S+RQTS+G++ AL+   + +++  +K+ FA +      Q +VL+T++D+R
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAEN------QDAVLLTTLDVR  637

Query  665  RYVRRLIEGDYYNLPVVSYQELTPEISVQPVGRI  698
            R+VR++IE D + LPV+S QEL  E++++  G I
Sbjct  638  RFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

108) hrpI in NC_010694


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  380 bits (1430),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 278/690 (41%), Positives = 478/690 (70%), Gaps = 42/690 (6%)

Query  18   RSEVVGAAIVMSIVFMMIIPLPTGLIDVLIALNICISSLLIVLAMYLPKPLAFSTFPSVL  77
            R ++  A +++  VFMMI+PLPT ++D+LIA+N+ +S +L+++++YL  PL FS FPS+L
Sbjct  16   RQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLL  75

Query  78   LLTTMFRLALSISTTRQILLQQDAGHIVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITK  137
            L+TT++RLAL+ISTTR +LLQ+DAG+IVEAFG+FVVGGNLAVG++IF I+TVV+F+VITK
Sbjct  76   LITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITK  135

Query  138  GSERVAEVAARFTLDAMPGKQMSIDSDLRAGLLEAHQARQRRENLAKESQLFGAMDGAMK  197
            GSERVAEV+ARF+LD+MPGKQMSID+D+RAG +++ +A++ RE + KES+LFGAMDGAMK
Sbjct  136  GSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMK  195

Query  198  FVKGDAIAGLVIVFINMIGGFAIGVLQNGMEPGAAMHIYSVLTIGDGLIAQIPALLISLT  257
            FVKGDAIAG+++++IN+IGG++IGV+Q+ M +  AM+ Y+VL+IGDGL AQIP+LLIS+T
Sbjct  196  FVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISIT  255

Query  258  AGMIITRVSADGQQVDANIGREIAEQLTSQPKA-WIMSAAGMLGFALLPGMPTAVFIIIS  316
            AG+I+TRV++  +Q   +++ E+A Q+  QP A W ++AA +  FALLPG P  +FI ++
Sbjct  256  AGIIVTRVPGSNKQ---SLANELAVQVGRQPDALW-LAAAILTVFALLPGFPFLIFITLA  311

Query  317  AIALGSGLFQLWRTRqqdnqqqadqlqaqqlaPEDNGHQDLRRFNPTRAYLLQFSPAHSN  376
            A   +++++  ++ R      +  Q    + ++E+ G  + R    + + +L+ ++   +
Sbjct  312  AAVAAPAFLLYRKNR------RISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHH  365

Query  377  SAAAESLIQHIRRLRNRLVYHFGFTLPSFDIEFSPALDDGEFRFCVYEIPLVTATFAVDR  436
            +     L ++I  LR R   H+G  LP  +I   P+L +  +   VY+  ++   ++ D 
Sbjct  366  P----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS  421

Query  437  LAVRKSSIELHAAD---GDSDGPIQPGQAERDEHHWCWLPPQHPWLQQE--DRRYWNAEQ  491
            L + ++   L + +   G   G+++            WL ++++ +Q    +  Y +++Q
Sbjct  422  LLLTRPCSSLVTNNQVLGAKMGSFD------------WLDAKQA-MQARTLGIPYVEGHQ  468

Query  492  LIMLRMEQAIHQSGAQFIGLQESKSILNWLESEQPELAQELQRIMPLSRFAAVLQRLASE  551
             I+  + + +++  A+FIG+QE++ +++ +E+   EL +ELQR +P+++ A +LQRL  E
Sbjct  469  RIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEE  528

Query  552  RIPLRSVRTIAETLIEHGQHERDSAALTDFVRIALKEHICHQYQQPNGLDAWL----LTP  607
             I++R +RTI  +L+  +  E+D   LT++VRIAL+ H+C+++ + +   +W+    L  
Sbjct  529  NISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNK---TWISVLRLGD  585

Query  608  ETEELLRDSLRQAQSETFFSLAQEYGVNLLNQLRSAFPPYDNHQALILVAQDLRSPLRAL  667
              E+L+RDS+RQ+ S T+ +L +  ++ +LN++++AF+  +N++A++L + D+R  +R +
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFA--ENQDAVLLTTLDVRRFVRKI  643

Query  668  LKDEFHAVPVLSFAELTSNVAINVLGRLDL  697
            +  ++  +PVLS  EL  ++ ++V G ++L
Sbjct  644  IERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

109) hrpI in NC_017445


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  380 bits (1429),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 278/683 (41%), Positives = 471/683 (69%), Gaps = 28/683 (4%)

Query  18   RSEVVGAAIVMSIVFMMIIPLPTGLIDVLIALNICISSLLIVLAMYLPKPLAFSTFPSVL  77
            R ++  A +++  VFMMI+PLPT ++D+LIA+N+ +S +L+++++YL  PL FS FPS+L
Sbjct  16   RQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLL  75

Query  78   LLTTMFRLALSISTTRQILLQQDAGHIVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITK  137
            L+TT++RLAL+ISTTR +LLQ+DAG+IVEAFG+FVVGGNLAVG++IF I+TVV+F+VITK
Sbjct  76   LITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITK  135

Query  138  GSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMK  197
            GSERVAEV+ARF+LD+MPGKQMSID+D+RAG I++ +A++ RE + KES+LFGAMDGAMK
Sbjct  136  GSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMK  195

Query  198  FVKGDAIAGLVIVFINMIGGFAIGVLQNGMEAGAAMHIYSVLTIGDGLIAQIPALLISLT  257
            FVKGDAIAG+++++IN+IGG++IGV+Q+ M A  AM+ Y+VL+IGDGL AQIP+LLIS+T
Sbjct  196  FVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISIT  255

Query  258  AGMIITRVSADGQQVDANIGREIAEQLTSQPKA-WIMSAAGMLGFALLPGMPTAVFVIIS  316
            AG+I+TRV++  +Q   +++ E+A Q+  QP A W ++AA +  FALLPG P  +F+ ++
Sbjct  256  AGIIVTRVPGSNKQ---SLANELAVQVGRQPDALW-LAAAILTVFALLPGFPFLIFITLA  311

Query  317  AIALGSGLFQLWRIKqqdnqqqadelqaqqlaPEDNGHQDLRRFNPTRAYLLQFSQAHLN  376
            A   ++  F L R +      +    +++  +  ++G    +R  P    L+    ++L+
Sbjct  312  AAV-AAPAFLLYRKN------RRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLH  364

Query  377  SEAAESLIQHIRRLRNRLVYHFGFTLPSFDIEFSPTLAADEFRFCVYEIPLVTATFDVGQ  436
                  L ++I  LR R   H+G  LP  +I   PTLA + +   VY+  ++   +  + 
Sbjct  365  H---PHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS  421

Query  437  LAVRTSSIEMHLADGDSDGQIQPGQAERDEHHWCWLPPQHPLLQQE-DRHYWNAQQLIML  495
            L +  +   +      ++ Q+  ++    +    WL +++++  +  +  Y +++Q I+ 
Sbjct  422  LLLTRPCSSLV-----TNNQVLGAKMGSFD----WLDAKQAMQARTLGIPYVEGHQRIIT  472

Query  496  RMEQAIHQSGSQFIGLQESKSILNWLESEQPELAQELQRIMPLSRFAAVLQRLASERIPL  555
             + + +++  ++FIG+QE++ +++ +E+   EL +ELQR +P+++ A +LQRL  E I++
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  556  RSVRTIAETLIEHGQHERDSAALTDFVRIALKEHICHQYQQPNG-LNVWLLTPETEELLR  614
            R +RTI  +L+  +  E+D   LT++VRIAL+ H+C+++ + +  ++V  L    E+L+R
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  615  DSLRQAQSETFFSLAQDYGINLLNQMRSAFPPYDNSPALILVAQDLRSPLRALLKDEFHA  674
            DS+RQ+ S T+ +L +  ++ +LN++++AF+  +N  A++L + D+R  +R ++  ++  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFV  650

Query  675  VPVLSFAELTSNVAINVLGRLDL  697
            +PVLS  EL  ++ ++V G ++L
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

110) hrcV in NC_017390


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  380 bits (1429),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 278/683 (41%), Positives = 471/683 (69%), Gaps = 28/683 (4%)

Query  18   RSEVVGAAIVMSIVFMMIIPLPTGLIDVLIALNICISSLLIVLAMYLPKPLAFSTFPSVL  77
            R ++  A +++  VFMMI+PLPT ++D+LIA+N+ +S +L+++++YL  PL FS FPS+L
Sbjct  16   RQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLL  75

Query  78   LLTTMFRLALSISTTRQILLQQDAGHIVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITK  137
            L+TT++RLAL+ISTTR +LLQ+DAG+IVEAFG+FVVGGNLAVG++IF I+TVV+F+VITK
Sbjct  76   LITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITK  135

Query  138  GSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMK  197
            GSERVAEV+ARF+LD+MPGKQMSID+D+RAG I++ +A++ RE + KES+LFGAMDGAMK
Sbjct  136  GSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMK  195

Query  198  FVKGDAIAGLVIVFINMIGGFAIGVLQNGMEAGAAMHIYSVLTIGDGLIAQIPALLISLT  257
            FVKGDAIAG+++++IN+IGG++IGV+Q+ M A  AM+ Y+VL+IGDGL AQIP+LLIS+T
Sbjct  196  FVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISIT  255

Query  258  AGMIITRVSADGQQVDANIGREIAEQLTSQPKA-WIMSAAGMLGFALLPGMPTTVFVIIS  316
            AG+I+TRV++  +Q   +++ E+A Q+  QP A W ++AA +  FALLPG P  +F+ ++
Sbjct  256  AGIIVTRVPGSNKQ---SLANELAVQVGRQPDALW-LAAAILTVFALLPGFPFLIFITLA  311

Query  317  AIALGSGLFQLWRIKqqdnqqqadelqaqqlaPEDNGHQDLRRFNPTRAYLLQFSQAHLN  376
            A   ++  F L R +      +    +++  +  ++G    +R  P    L+    ++L+
Sbjct  312  AAV-AAPAFLLYRKN------RRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLH  364

Query  377  SEAAESLIQHIRRLRNRLVYHFGFTLPSFDIEFSPTLAADEFRFCVYEIPLVTATFDVGQ  436
                  L ++I  LR R   H+G  LP  +I   PTLA + +   VY+  ++   +  + 
Sbjct  365  H---PHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS  421

Query  437  LAVRTSSIEMHLADGDSDGQIQPGQAERDEHHWCWLPPQHPLLQQE-DRHYWNAQQLIML  495
            L +  +   +      ++ Q+  ++    +    WL +++++  +  +  Y +++Q I+ 
Sbjct  422  LLLTRPCSSLV-----TNNQVLGAKMGSFD----WLDAKQAMQARTLGIPYVEGHQRIIT  472

Query  496  RMEQAIHQSGSQFIGLQESKSILNWLESEQPELAQELQRIMPLSRFAAVLQRLASERIPL  555
             + + +++  ++FIG+QE++ +++ +E+   EL +ELQR +P+++ A +LQRL  E I++
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  556  RSVRTIAETLIEHGQHERDSAALTDFVRIALKEHICHQYQQPNG-LNVWLLTPETEELLR  614
            R +RTI  +L+  +  E+D   LT++VRIAL+ H+C+++ + +  ++V  L    E+L+R
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  615  DSLRQAQSETFFSLAQDYGINLLNQMRSAFPPYDNSPALILVAQDLRSPLRALLKDEFHA  674
            DS+RQ+ S T+ +L +  ++ +LN++++AF+  +N  A++L + D+R  +R ++  ++  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFV  650

Query  675  VPVLSFAELTSNVAINVLGRLDL  697
            +PVLS  EL  ++ ++V G ++L
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

111) hrpI in NC_012214


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  380 bits (1429),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 278/683 (41%), Positives = 471/683 (69%), Gaps = 28/683 (4%)

Query  18   RSEVVGAAIVMSIVFMMIIPLPTGLIDVLIALNICISSLLIVLAMYLPKPLAFSTFPSVL  77
            R ++  A +++  VFMMI+PLPT ++D+LIA+N+ +S +L+++++YL  PL FS FPS+L
Sbjct  16   RQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLL  75

Query  78   LLTTMFRLALSISTTRQILLQQDAGHIVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITK  137
            L+TT++RLAL+ISTTR +LLQ+DAG+IVEAFG+FVVGGNLAVG++IF I+TVV+F+VITK
Sbjct  76   LITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITK  135

Query  138  GSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMK  197
            GSERVAEV+ARF+LD+MPGKQMSID+D+RAG I++ +A++ RE + KES+LFGAMDGAMK
Sbjct  136  GSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMK  195

Query  198  FVKGDAIAGLVIVFINMIGGFAIGVLQNGMEAGAAMHIYSVLTIGDGLIAQIPALLISLT  257
            FVKGDAIAG+++++IN+IGG++IGV+Q+ M A  AM+ Y+VL+IGDGL AQIP+LLIS+T
Sbjct  196  FVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISIT  255

Query  258  AGMIITRVSADGQQVDANIGREIAEQLTSQPKA-WIMSAAGMLGFALLPGMPTTVFVIIS  316
            AG+I+TRV++  +Q   +++ E+A Q+  QP A W ++AA +  FALLPG P  +F+ ++
Sbjct  256  AGIIVTRVPGSNKQ---SLANELAVQVGRQPDALW-LAAAILTVFALLPGFPFLIFITLA  311

Query  317  AIALGSGLFQLWRIKqqdnqqqadelqaqqlaPEDNGHQDLRRFNPTRAYLLQFSQAHLN  376
            A   ++  F L R +      +    +++  +  ++G    +R  P    L+    ++L+
Sbjct  312  AAV-AAPAFLLYRKN------RRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLH  364

Query  377  SEAAESLIQHIRRLRNRLVYHFGFTLPSFDIEFSPTLAADEFRFCVYEIPLVTATFDVGQ  436
                  L ++I  LR R   H+G  LP  +I   PTLA + +   VY+  ++   +  + 
Sbjct  365  H---PHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDS  421

Query  437  LAVRTSSIEMHLADGDSDGQIQPGQAERDEHHWCWLPPQHPLLQQE-DRHYWNAQQLIML  495
            L +  +   +      ++ Q+  ++    +    WL +++++  +  +  Y +++Q I+ 
Sbjct  422  LLLTRPCSSLV-----TNNQVLGAKMGSFD----WLDAKQAMQARTLGIPYVEGHQRIIT  472

Query  496  RMEQAIHQSGSQFIGLQESKSILNWLESEQPELAQELQRIMPLSRFAAVLQRLASERIPL  555
             + + +++  ++FIG+QE++ +++ +E+   EL +ELQR +P+++ A +LQRL  E I++
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  556  RSVRTIAETLIEHGQHERDSAALTDFVRIALKEHICHQYQQPNG-LNVWLLTPETEELLR  614
            R +RTI  +L+  +  E+D   LT++VRIAL+ H+C+++ + +  ++V  L    E+L+R
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  615  DSLRQAQSETFFSLAQDYGINLLNQMRSAFPPYDNSPALILVAQDLRSPLRALLKDEFHA  674
            DS+RQ+ S T+ +L +  ++ +LN++++AF+  +N  A++L + D+R  +R ++  ++  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFV  650

Query  675  VPVLSFAELTSNVAINVLGRLDL  697
            +PVLS  EL  ++ ++V G ++L
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

112) DvMF_2415 in NC_011769


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  379 bits (1425),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 285/664 (43%), Positives = 468/664 (71%), Gaps = 32/664 (4%)

Query  37   TPLVDTLIGANMALSFVMLMMSMYVRSVLDFSVFPTMLLFTTLFRVGLNITTTRLILLQA  96
            T +VD LI+ N+A+S ++LM+S+Y+R  L+FSVFP++LL+TTL+R++L I+TTRL+LLQ 
Sbjct  38   TTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQH  97

Query  97   DAGEIIFVFGEYalggnfvvgavvfviltivQFLVIAKGAERVAEVGARFTLDAMPGKQM  156
            DAGEI+  FG++ +GGN+ VG ++F I+T+VQF+VI+KG+ERVAEV+ARF+LD+MPGKQM
Sbjct  98   DAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQM  157

Query  157  SIDADMRAGVIDMEEAQRRRNMVSQESQMYGAMDGAMKFVKGDSIAGMivavvnivggtv  216
            SID+DMRAG ID  EA+R R+ V +ES+++GAMDGAMKFVKGD+IAG+IV ++NI+GG  
Sbjct  158  SIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGIT  217

Query  217  igiTQHGMTGADALHTYGILTIGDGLVSQIPSLLVSISAGILITR-TGDSGGNVGAQIGG  275
            IG+ QH M++ +A++TY++L+IGDGL +QIPSLL+SI+AGI++TR  G +  +++ +++ 
Sbjct  218  IGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAV  277

Query  276  QIFGQPKALLMAGGLVFLFALVPGFPKPQlfglalaiggfgYVLQRMAEAPVAADPRAEL  335
            Q+  QP AL +A++++ +FAL+PGFP   ++ LA A+++ +++L R  +  ++ D RA+ 
Sbjct  278  QVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRK-NRRISQDGRAN-  335

Query  336  SRSLapaarprtprpgaaqpGDDFAP-TVPIILDLSAELGEALHYDALNEELINLRRALY  394
                            ++  G+  +P +VP++L+ +++    LH   L  ++  LR+  +
Sbjct  336  -----------GGSEEGGATGQRMTPGAVPLMLHCASN----LHHPHLGRDIDGLRWRWF  380

Query  395  FDLGVPFPGINIRPSPGLEGLSYVLNLNEIPMSRGTLER-GMSLARDTSENLAMLGVNAR  453
             +LGVP+P ++IR  P L   +  +++ +  +    L   ++ L+R  S   +++  N  
Sbjct  381  EHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCS---SLVTNNQV  437

Query  454  TGERFLPDVDPLWVPDEQLHLLDKAGIGHM-SHARILAYHLSLVLSRHASNFLGMQEAKY  512
             G + +   D  W+   Q       GI  + +H RI++  L+ V+ R +++F+G+QE++Y
Sbjct  438  LGAK-MGSFD--WLDAKQAMQARTLGIPYVEGHQRIITC-LTRVFERYTAEFIGVQETRY  493

Query  513  LLDRMEERAPDLVREATRLLPVQRIAEIFQRLVQEQISIRDLRNILEALIEWSPKEKDTV  572
            L+D ME R  +LV+E  R +PV ++AEI+QRLV+E+ISIRDLR I+ AL+ W+PKEKD V
Sbjct  494  LMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIV  553

Query  573  MLTEYVRGALKRQISYMHSRGQNMLPAILLDPQVEETIRKAIRQTSAGAFLALEPSVTER  632
            MLTEYVR AL+R++    S+ +  ++ + L+  VE+ IR +IRQTS+G++ ALE   +  
Sbjct  554  MLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLL  613

Query  633  FMKAVGDAAGRYASHAQKPVIMTSMDIRRYVRRLIEGDHYGLAVISYQELTPEISVQPVN  692
            +++ + +A   +A + Q +V++T++D+RR+VR++IE D + L+V+S QEL  E++++   
Sbjct  614  ILNKIKNA---FAEN-QDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAG  669

Query  693  RIRL  696
             I L
Sbjct  670  TIEL  673

113) yscV in NC_016642


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  374 bits (1404),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 306/699 (44%), Positives = 492/699 (71%), Gaps = 37/699 (5%)

Query  1    MSQRNDVLLAFLLIAIVFMMILPLPTVLVDTliainlslaaillmaalylKDVVALSAFP  60
            ++ R+D++LA +L+  VFMMILPLPT +VD LIAINL+++ ILLM ++YL+D + +S FP
Sbjct  13   ITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFP  72

Query  61   silllttlfrlslsitttrlillKADAGEIIDTFGNFVVQGNLVVGIVIFLILTIVNFLV  120
            S+LL+TTL+RL+L+I+TTRL+LL+ DAGEI+++FG+FVV GNL VG++IF I+T+V+F+V
Sbjct  73   SLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIV  132

Query  121  ITKGSERVAEVSARFSLDAMPGKQMSIDSDMRAGQIELDEAKRRRSKLEKESQLYGSMDG  180
            ITKGSERVAEVSARFSLD+MPGKQMSID+DMRAG I+  EAKR R +++KES+L+G+MDG
Sbjct  133  ITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDG  192

Query  181  AMKFVKGDAIAGLIITAVNIIGGVIIGTSQHGMSAVDALDRYTILTIGDGLVAQIPALFI  240
            AMKFVKGDAIAG+I+  +NIIGG+ IG  QH MSA +A++ Y++L+IGDGL AQIP+L+I
Sbjct  193  AMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLI  252

Query  241  SITAGFMVTRVSTDDSSDLGSDIAKQLNGEPKALMIAAAIMVGFALIPGFPSVIFLLLAA  300
            SITAG++VTRV+  +   L++++A Q+  +P AL +AAAI+  FAL+PGFP +IF+ LAA
Sbjct  253  SITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAA  312

Query  301  IFGSIAYFAMRRTKTQSAKKDSQQLSAFAPAIAPEGEAQMMPDEDMATEVEAAQDLAITI  360
              ++ A++  R+ +                 I+ +G A+  ++E+ AT    + +     
Sbjct  313  AVAAPAFLLYRKNRR----------------ISQDGRANGGSEEGGATGQRMTPG-----  351

Query  361  TVPLIVDISSSVRSTLNPKKLDREVAKVRKALYFDLGVPFPGIKLRLNESLPEGEYRILV  420
            +VPL+++ +S+    L+   L+R++  +R   + +LGVP+P + +R + +L+E    + V
Sbjct  352  AVPLMLHCASN----LHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQV  407

Query  421  NEVPVARGAARSGYFIARETPPNLAMFNIPYEEGDSFLPNTPSF-WVSNRHFEQATRAGI  479
             +  V      ++ ++     ++L        + + + ++  SF W+  ++  QA   GI
Sbjct  408  YQERVLEVVLPPDSLLLTRPCSSLV------TNNQVLGAKMGSFDWLDAKQAMQARTLGI  461

Query  480  QTLTLTGMLSLHLAHVLKQHAAEFLGIQECMFLLKHMESDFDELVREVNRAVPLISLADV  539
              +     +   L++V+ + +AEF+G+QE  +L+  ME+ ++ELV+E++R +P+  +A++
Sbjct  462  PYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEI  521

Query  540  LKRLVREDISIRDMRTILQAIVEWGQKEKDPLMLTEHIRMALSRYITHKYSAGQHIIPAY  599
            L+RLV E+ISIRD+RTI+ A+V W+ KEKD +MLTE +R+AL R + +++S  +  I+  
Sbjct  522  LQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVL  581

Query  600  LIDKDIEDEVRGAIRQTSGASYLALSPDTHRQLITVMRSAIGDNLAHNGIAPVILVPMDI  659
             ++ ++E+ +R++IRQTS+++Y AL  + ++ L+ + +  I + +A+N   +V+L  +D+
Sbjct  582  RLGDGVEHLIRDSIRQTSSGTYSAL--EERQSLLILNK--IKNAFAENQ-DAVLLTTLDV  636

Query  660  RRFFRKVIERDYADLAVLSFQELAPNANIQPLEKISLRG  698
            RRF RK+IERD   L+VLS QEL+ + N++    I L G
Sbjct  637  RRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIG  675

114) lcrD in NC_010157


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 288/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQEAF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y ALE   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRI  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G I
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

115) YPA_CD0028 in NC_008122


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 288/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQEAF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y ALE   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRI  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G I
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

116) yscV in NC_005813


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 288/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQEAF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y ALE   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRI  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G I
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

117) yscV in NC_003131


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 288/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQEAF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y ALE   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRI  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G I
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

118) yscV in NC_017153


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 288/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQEAF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y ALE   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRI  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G I
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

119) yscV in NC_017157


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 288/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQEAF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y ALE   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRI  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G I
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

120) YPDSF_3983 in NC_009377


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 288/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQEAF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y ALE   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRI  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G I
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

121) yscV in NC_014017


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 288/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQEAF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y ALE   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRI  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G I
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

122) pYV0060 in NC_006153


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 288/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQEAF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y ALE   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRI  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G I
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

123) YPTS_4279 in NC_010635


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 288/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYIISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQEAF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALEPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y ALE   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRI  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G I
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

124) lcrD in NC_008791


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  372 bits (1398),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 286/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSLLTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYLISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQETF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSAVRQTSAGSYLALDPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y AL+   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRV  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G +
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

125) YE105_P0016 in NC_015475


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  372 bits (1397),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 286/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYLISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQETF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALDPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y AL+   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRV  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G +
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

126) Y11_p0841 in NC_017565


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  372 bits (1397),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 286/658 (44%), Positives = 472/658 (72%), Gaps = 36/658 (5%)

Query  47   NMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQADAGQIVYTfg  106
            N+++SV+LLMI+IY+  PL+FS FP++LL+TTL+RLAL++STTR++LLQ DAG+IV +FG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  107  nfvvggnlivgivifliitivqflvitKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGV  166
            +FVVGGNL VG++IF IIT+VQF+VITKGSERVAEVSARFSLD+MPGKQMSIDGDMRAG 
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  167  IDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAA  226
            ID  EA+  R  ++KES++FG+MDGAMKFVKGDAIAG+I+I++NI+GG+TIGV Q  ++A
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  227  AEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDSSDLGSDIGKQVVAQPKAMl  286
             EA++ Y++L++GDG+ +Q+P+LLI+ITAGIIVTRV++ +   L+++++ QV  QP A+ 
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALW  287

Query  287  iggvllllfglipgfpTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQSILTSGSGAPA  346
            +++ +L +F+L+PGFP + F+ LA  V+  +++L RK+ R  +  +       +GS   +
Sbjct  288  LAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRA-----NGGSEEGG  342

Query  347  ARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEAIALNDELVRVRRALYLDLG  406
            A  +  T+GA              VPL+++  S+ +++     L  ++  +R+  + +LG
Sbjct  343  ATGQRMTPGA--------------VPLMLHCASNLHHP----HLGRDIDGLRWRWFEHLG  384

Query  407  VPFPGIHLRFNEGMGEGEYLISLQEVPVARGELKAGYLLVRESVSQLELLGIPYEKGEHL  466
            VP+P +++R +  ++E    + + +  V    L ++ LL+  + S L        + + L
Sbjct  385  VPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVL  438

Query  467  LPDQETF-WVSVEYEERLEKSQLEFF-SHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQ  524
             +   +F W+      +     + +  +H +++T  L++V+  Y+ +FIG+QETRYL++ 
Sbjct  439  GAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIIT-CLTRVFERYTAEFIGVQETRYLMDA  497

Query  525  MEGGYGELIKEVQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTE  584
            MEG YGEL+KE+QR +P+ +++EILQRLV E+ISIR++R+I+ A+V W+ KEKD+V LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  585  YIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSGVRQTSAGSYLALDPAVTESLLEQ  644
            Y+R +L+R +C ++++ +  ++   +++ VE+ IR ++RQTS+G+Y AL+   +  +L++
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  645  VRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRV  702
            +++++++    +  +VL+ ++D+RR+VRK+IE + + LPVLS QEL +++N++  G +
Sbjct  618  IKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

127) Dd586_1888 in NC_013592


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  371 bits (1396),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 273/658 (42%), Positives = 460/658 (70%), Gaps = 22/658 (3%)

Query  37   PLPTDLIDVLIALNICISSLLIVLAMYLPKPLAFSTFPAVLLLTTMFRLALSISTTRQIL  96
            PLPT ++D+LIA+N+ +S +L+++++YL  PL FS FP++LL+TT++RLAL+ISTTR +L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  97   LQQDAGHVVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVAARFTLDAMPG  156
            LQ+DAG++VEAFG+FVVGGNLAVG++IF I+TVV+F+VITKGSERVAEV+ARF+LD+MPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  157  KQMSIDSDLRAGLIDSQQARQRRENLAKESQLFGAMDGAMKFVKGDAIAGLVIVFINMIG  216
            KQMSID+D+RAG IDS +A++ RE + KES+LFGAMDGAMKFVKGDAIAG+++++IN+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  217  GFAIGVLQNGMAAGDAMHIYSVLTIGDGLIAQIPALLISLTAGMIITRVSADGQQTDNNI  276
            G++IGV+Q+ M+A +AM+ Y+VL+IGDGL AQIP+LLIS+TAG+I+TRV++  +Q+   +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQS---L  271

Query  277  GREIAEQLTSQPKA-WIISSVGMLGFALLPGMPTLVFLMISLVSLGSGLFQLWRAKQNGL  335
            + E+A Q+  QP A W+ +++ +  FALLPG P L+F+ ++  ++++  F L R ++   
Sbjct  272  ANELAVQVGRQPDALWLAAAI-LTVFALLPGFPFLIFITLA-AAVAAPAFLLYRKNRRIS  329

Query  336  QDALLANDNLPADQNGYQDLRRFNPTRAYLLQFHTVWQGTAAAAVLVQNIRRLRNRLVYH  395
            QD   +  N  +++ G  + R    + + +L+      +    + L ++I  LR R   H
Sbjct  330  QD---GRANGGSEEGGATGQRMTPGAVPLMLHC----ASNLHHPHLGRDIDGLRWRWFEH  382

Query  396  FGFTLPSFDIEFTPTVPEDEFRFCVYEIPQLRASFGVPLLAVSREQLPQDGQDDGMIPGL  455
            +G  LP  +I   PT++E+ +   VY+   L   +    L ++R   +   +++ + + +
Sbjct  383  LGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAKM  442

Query  456  AARDEHHLLWMTPEHPMLQQPQLCPW-NAEALILMRMENAMHRSGAQFIGLQETKSILAW  514
            ++ D     W+ + ++M  +    P  +++  I+  +    +R  A+FIG+QET+ ++  
Sbjct  443  GSFD-----WLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDA  497

Query  515  LESEQPELAQELQRIMPLSRFASVLQRLASERVPLRSVRPIAEALIDIGQHERDINALTD  574
            +E+   EL +ELQR +P+++ A +LQRL  E +++R +R I  AL+  +  E+DI  LT+
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  575  YVRLELKAQICHQYSQEDS-LTVWLLTPETEELLRDALRQTQSDTFFALNQEYAATLLGQ  633
            YVR+ L+ ++C+++S++ + ++V  L    E+L+RD++RQT S+T+ AL++  +  +L +
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  634  LRRAFPPMLPSSALILVAQDLRSPLRILLQDEFHHVPVLSFTELESHLSINVAGRIDL  691
            ++ AF+      A++L + D+R  +R +++ ++  +PVLS  EL  +++++VAG I+L
Sbjct  618  IKNAFAE--NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

128) PCC21_022840 in NC_018525


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  370 bits (1392),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 270/662 (41%), Positives = 461/662 (70%), Gaps = 30/662 (4%)

Query  37   PLPTGLIDVLIALNICVSSLLIVLAMYLPKPLAFSTFPAVLLLTTMFRLAISISTTRQIL  96
            PLPT ++D+LIA+N+  S +L+++++YL  PL FS FP++LL+TT++RLA++ISTTR +L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  97   LQQDGGHIVEAFGNYVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVAARFTLDAMPG  156
            LQ+D+G+IVEAFG++VVGGNLAVG++IF I+TVV+F+VITKGSERVAEV+ARF+LD+MPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  157  KQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMKFVKGDAIASLVIVFINMIG  216
            KQMSID+D+RAG I++ +A++ RE + KES+LFGAMDGAMKFVKGDAIA++++++IN+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  217  GFAIGVLQHNMAASDAMHVYSVLTIGDGLIAQIPALLISLTAGMIITRVSADGQKVDANI  276
            G++IGV+QH+M+A +AM+ Y+VL+IGDGL AQIP+LLIS+TAG+I+TRV++  ++   ++
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQ---SL  271

Query  277  GREIAEQLTSQPKA-WIISSIGMFGFALLPGMPTLVFVTISLASLGSG--LFQL-WRIKQ  332
            + E+A Q+  QP A W+ ++I +  FALLPG P L+F+T++ A  +++  L++  +RI Q
Sbjct  272  ANELAVQVGRQPDALWLAAAI-LTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQ  330

Query  333  QGQLDASQSEADNIPAEQNGYQDLRRFNPTRAYLLLFHPVWQEQPTATALVQNIRRLRNK  392
            +G+ +++  E++            +R  P    L+L  +   ++P    L ++I  LR +
Sbjct  331  DGRANGGSEEGGATG---------QRMTPGAVPLMLHCASNLHHPH---LGRDIDGLRWR  378

Query  393  LVYRFGFTLPSFDIEFSDRLAEDEFQFCVYEIPYVKATFVTDRLAIASGAIEPTDANLAT  452
               ++G  LP  +I     LAE+ +   VY+   +   +  D L ++        ++L T
Sbjct  379  WFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPC-----SSLVT  433

Query  453  PGPTLRDE-SHWLWLPLAQVAQQPD-DVPRWSADELILARMEQAIHRTGSQFIGLQETKS  510
                L    +   WL   Q  Q    ++P   +++ I++ + + ++R  ++FIG+QET+ 
Sbjct  434  NNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRY  493

Query  511  ILAWLESEQPELAQELQRIMPLSRFASVLQRLASERVPLRSVRPIAEALIEVGQHERDTL  570
            ++  +E+   EL +ELQR +P+++ A +LQRL  E +++R +R I  AL+  +  E+D +
Sbjct  494  LMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIV  553

Query  571  ALTDYVRLALKSQICHQYSDENN-LAVWLLTPESEELLRDALRQTQNETFFALTQDYAST  629
             LT+YVR+AL+ ++C+++S+++  ++V  L    E+L+RD++RQT + T+ AL +  +  
Sbjct  554  MLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLL  613

Query  630  LLGQLRQAFPPLSSQRSLVLVAQDLRSPLRTLLQDEFHHVPVLSFTELESTLSINVIGRL  689
            +L ++++AF+   +Q +++L + D+R  +R +++ ++  +PVLS  EL   ++++V G +
Sbjct  614  ILNKIKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

Query  690  DL  691
            +L
Sbjct  672  EL  673

129) PC1_2206 in NC_012917


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  369 bits (1385),  Expect = 5e-103, Method: Compositional matrix adjust.
 Identities = 268/662 (41%), Positives = 462/662 (70%), Gaps = 30/662 (4%)

Query  37   PLPTELIDVLIALNICASSLLIVLAMYLPKPLAFSTFPAVLLLTTMFRLAISISTTRQIL  96
            PLPT ++D+LIA+N+  S +L+++++YL  PL FS FP++LL+TT++RLA++ISTTR +L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  97   LQQDGGHIVEAFGNYVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVAARFTLDAMPG  156
            LQ+D+G+IVEAFG++VVGGNLAVG++IF I+TVV+F+VITKGSERVAEV+ARF+LD+MPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  157  KQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMKFVKGDAIASLVIVFINMIG  216
            KQMSID+D+RAG I++ +A++ RE + KES+LFGAMDGAMKFVKGDAIA++++++IN+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  217  GFAIGVLQHNMAASDAMHVYSVLTIGDGLIAQIPALLISLTAGMIITRVSADGQKVDANI  276
            G++IGV+QH+M+A +AM+ Y+VL+IGDGL AQIP+LLIS+TAG+I+TRV++  ++   ++
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQ---SL  271

Query  277  GREIAEQLTSQPKA-WIISSIGMFGFALLPGMPTLVFVAISLASLGSG--LFQL-WRIKQ  332
            + E+A Q+  QP A W+ ++I +  FALLPG P L+F++++ A  +++  L++  +RI Q
Sbjct  272  ANELAVQVGRQPDALWLAAAI-LTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQ  330

Query  333  QGQLDASQSEADNMPAEQNGYQDLRRFNPTRAYLLLFHPIWQGQPTATALVQNIRRLRNK  392
            +G+ +++  E++            +R  P    L+L  +    +P    L ++I  LR +
Sbjct  331  DGRANGGSEEGGATG---------QRMTPGAVPLMLHCASNLHHPH---LGRDIDGLRWR  378

Query  393  LVYRFGFTLPSFDIEFSDRLAEDEFQFCVYEIPYVKATFVTDRLAVASAAVEQVDTELAT  452
               ++G  LP  +I     LAE+ +   VY+   +   +  D L ++ +      + L T
Sbjct  379  WFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPC-----SSLVT  433

Query  453  PGPTLRDE-SQWLWLPLAHVSQQPD-DVPRWTADELILARMEQAIHRTGSQFIGLQETKS  510
                L    +   WL   +  Q    ++P   +++ I++ + + ++R  ++FIG+QET+ 
Sbjct  434  NNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRY  493

Query  511  ILAWLESEQPELAQELQRIMPLSRFASVLQRLASERVPLRSVRPIAEALIEVGQHERDTL  570
            ++  +E+   EL +ELQR +P+++ A +LQRL  E +++R +R I  AL+  +  E+D +
Sbjct  494  LMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIV  553

Query  571  ALTDYVRLALKSQICHQYSDENS-LAVWLLTPESEELLRDALRQTQNETFFALTQDYAST  629
             LT+YVR+AL+ ++C+++S++++ ++V  L    E+L+RD++RQT + T+ AL +  +  
Sbjct  554  MLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLL  613

Query  630  LLSQLRQAFPPLSSQRSLVLVAQDLRSPLRTLLQDEFHHVPVLSFTELESTLSINVIGRL  689
            +L+++++AF+   +Q +++L + D+R  +R +++ ++  +PVLS  EL   ++++V G +
Sbjct  614  ILNKIKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

Query  690  DL  691
            +L
Sbjct  672  EL  673

130) hrpI in NC_004547


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  367 bits (1379),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 269/659 (41%), Positives = 460/659 (70%), Gaps = 24/659 (3%)

Query  37   PLPTGLIDVLIALNICASSLLIVLAMYLPKPLAFSTFPAVLLLTTMFRLAISISTTRQIL  96
            PLPT ++D+LIA+N+  S +L+++++YL  PL FS FP++LL+TT++RLA++ISTTR +L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  97   LQQDGGHIVEAFGNYVVGGNLAVGLVIFLILTVVNFMVITKGSERVAEVAARFTLDAMPG  156
            LQ+D+G+IVEAFG++VVGGNLAVG++IF I+TVV+F+VITKGSERVAEV+ARF+LD+MPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  157  KQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMKFVKGDAIASLVIVFINMIG  216
            KQMSID+D+RAG I++ +A++ RE + KES+LFGAMDGAMKFVKGDAIA++++++IN+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  217  GFAIGVLQHNMAASDAMHVYSVLTIGDGLIAQIPALLISLTAGMIITRVSADGQKVDANI  276
            G++IGV+QH+M+A +AM+ Y+VL+IGDGL AQIP+LLIS+TAG+I+TRV++  ++   ++
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQ---SL  271

Query  277  GREIAEQLTSQPKA-WIISSIGMFGFALLPGMPTLVFVAIslsslgsglFQLWRIKQQGQ  335
            + E+A Q+  QP A W+ ++I +  FALLPG P L+F+++  +++++  F L R +++  
Sbjct  272  ANELAVQVGRQPDALWLAAAI-LTVFALLPGFPFLIFITL-AAAVAAPAFLLYRKNRRIS  329

Query  336  LDANQLEADNMPAEQNGYQDLRRFNPTRAYLLLFHPVWQGQPTATVLVQNIRRLRNRLVY  395
             D+      N  +E+ G  + +R  P    L+L  +    +P    L ++I  LR R   
Sbjct  330  QDGR----ANGGSEEGGATG-QRMTPGAVPLMLHCASNLHHPH---LGRDIDGLRWRWFE  381

Query  396  RFGFTLPSFDIEFSDRLAEDEFQFCVYEIPYVKATFVTDQLAVANGAIEQVDATIATPGH  455
            ++G  LP  +I     LAE+ +   VY+   +   +  D L ++        +++ T  +
Sbjct  382  HLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPC-----SSLVTNNQ  436

Query  456  TLRDE-SQWLWLPLAHVAQQPD-DIPRWTSDELILARMEQAIHRTGSQFIGLQETKSILA  513
             L    +   WL   +  Q    +IP   +++ I++ + + ++R  ++FIG+QET+ ++ 
Sbjct  437  VLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMD  496

Query  514  WLESEQPELAQELQRIMPLSRFASVLQRLASERVPLRSVRPIAEALIEVGQHERDTLALT  573
             +E+   EL +ELQR +P+++ A +LQRL  E +++R +R I  AL+  +  E+D + LT
Sbjct  497  AMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLT  556

Query  574  DYVRLALKSQICHQYSDENN-LAVWLLTPESEELLRDALRQTQNETFFALTQDYASTLLS  632
            +YVR+AL+ ++C+++S+++  ++V  L    E+L+RD++RQT + T+ AL +  +  +L+
Sbjct  557  EYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILN  616

Query  633  QLRQAFPPFSSQSSLVLVAQDLRSPLRTLLQDEFHHVPVLSFTELESTLSINVIGRLDL  691
            ++++AF+   +Q +++L + D+R  +R +++ ++  +PVLS  EL   ++++V G ++L
Sbjct  617  KIKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

131) Marme_1079 in NC_015276


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  363 bits (1363),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 288/695 (42%), Positives = 476/695 (69%), Gaps = 35/695 (5%)

Query  12   AITMMK-RSEIVGAVFVLAIVFMMIIPMPTGLVDFlialnislssllialaMYLPSPLAF  70
            ++TM+  R +I  AV +L  VFMMI+P+PT +VD+LIA+N+++S +L+ +++YL  PL F
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  71   SSFPAVLLLTTMFRLALSISTTRLILLEQDAGDIVEAFGNFVVGGNLAVGLVIFLILTVV  130
            S FP++LL+TT++RLAL+ISTTRL+LL++DAG+IVEAFG+FVVGGNLAVG++IF I+TVV
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  131  NFLVITKGSERVAEVAARFTLDAMPGKQMSIDSDLRAGLLAPQEARFKREQLGKESQLFG  190
            +F+VITKGSERVAEV+ARF+LD+MPGKQMSID+D+RAG + + EA+  RE++ KES+LFG
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  191  AMDGAMKFVKGDAIAGLIIVFINLIGGFSIGTLQHDMSASESMHLYSVLTIGDGLIAQIP  250
            AMDGAMKFVKGDAIAG+I+++IN+IGG++IG +QH MSA E+M+ Y+VL+IGDGL AQIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  251  ALLISLTAGMIITRVAPDNQEIDANIGREMAQQISSQPKA-WIIAACGLLGFAILPGMPT  309
            +LLIS+TAG+I+TRV+  N++   +++ E+A Q++ QP A W+ AA  L  FA+LPG P 
Sbjct  249  SLLISITAGIIVTRVPGSNKQ---SLANELAVQVGRQPDALWLAAAI-LTVFALLPGFPF  304

Query  310  VSFLSLAIVFLLCGGFQLYKAMKIRQFQQQESDQTATPAENGDEDLRRFNPSRPYLLLFN  369
            + F++LA       +F LY+  K R++ Q+  +++   +E+G+   +R  P+   L+L  
Sbjct  305  LIFITLAAAVAA-PAFLLYR--KNRRISQD--GRANGGSEEGGATGQRMTPGAVPLMLHC  359

Query  370  PIRSTPNDPFTVQLIREARRCRNRIVDTFGITLPSFDIDYDATLGEDEFCFCVYEVPYIR  429
            +  S  ++P   +L R+    R R  + +G+ LP  +I  D+TL+E+ +   VY+   + 
Sbjct  360  A--SNLHHP---HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLE  414

Query  430  ATYTPDLIALNASELTEEELGKEDFKDRRTGSPEREEERWLWIPSTSPL-TQNESYTFTL  488
                PD + L  +      + +++  + + GS +       W+ +  ++ ++  +  +  
Sbjct  415  VVLPPDSLLLTRP--CSSLVTNNQVLGAKMGSFD-------WLDAKQAMQARTLGIPYVE  465

Query  489  PirlilerlerAFFATGPQFIGLQEAKTFVSWIEMEQPELAQELQRIVPTSRFASVLKRL  548
              + I+  L R F    ++FIG+QE++ ++  +E    EL +ELQR +P ++ A +L+RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  549  AAESVPLRAIRPIAEALIEHGQYERDTGALTDFVRISLKAQICHQYTSDQGMHVWL----  604
              E++++R +R I  AL+  +  E+D   LT++VRI+L+ ++C++++ ++    W+    
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKT---WISVLR  582

Query  605  LTPEAEETLRDSLRQTQTESFFALSREANQSLVEQLRDAFPILATPIPVLLVAQDLRRIL  664
            L    E+ +RDS+RQT + ++ AL    +  +++++++AF+      +VLL + D+RR++
Sbjct  583  LGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFA--ENQDAVLLTTLDVRRFV  640

Query  665  RNLLQDEFNHIPVLSFTELQSTSHVNVLGHISLDG  699
            R++++ ++  +PVLS  EL    +++V G I L G
Sbjct  641  RKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIG  675

132) Dd1591_1891 in NC_012912


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  362 bits (1361),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 273/662 (42%), Positives = 456/662 (69%), Gaps = 26/662 (3%)

Query  37   PLPTGLIDVLIAFNICISSLLIVLAMYLPKPLAFSTFPAVLLLTTMFRLALSISTTRQIL  96
            PLPT ++D+LIA+N+ +S +L+++++YL  PL FS FP++LL+TT++RLAL+ISTTR +L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  97   LQQDAGHVVEAFGNFVVGGNLAVGLVIFMILTVVNFLVITKGSERVAEVAARFTLDAMPG  156
            LQ+DAG++VEAFG+FVVGGNLAVG++IF I+TVV+F+VITKGSERVAEV+ARF+LD+MPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  157  KQMSIDSDLRAGLIDSQQARQRRENLAKESQLFGAMDGAMKFVKGDAIASLVIVFINMIG  216
            KQMSID+D+RAG IDS +A++ RE + KES+LFGAMDGAMKFVKGDAIA++++++IN+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  217  GFAIGVLQNGMAAGDAMHIYSVLTIGDGLIAQIPALLISLTAGMIITRVSADGQKTDNNI  276
            G++IGV+Q+ M+A +AM+ Y+VL+IGDGL AQIP+LLIS+TAG+I+TRV++  +++   +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQS---L  271

Query  277  GREIAEQLTSQPKA-WIISSVGMLGFALLPGMPTLVFllislaslgsglFQLWRAKQSgl  335
            + E+A Q+  QP A W+ +++ +  FALLPG P L+F +   A++++  F L R ++   
Sbjct  272  ANELAVQVGRQPDALWLAAAI-LTVFALLPGFPFLIF-ITLAAAVAAPAFLLYRKNRRIS  329

Query  336  qdalladdglpadqNGYQDLRRFNPTRAYLLQFHTVWQGAAAAALLVQEIRRLRNRLVYH  395
            QD+   +++  ++  G    +R  P    L+ +H    +    + L ++I  LR R   H
Sbjct  330  QDGRANGGSEEGGATG----QRMTPGAVPLM-LHCA--SNLHHPHLGRDIDGLRWRWFEH  382

Query  396  FGFTLPSFDIEFTPNVPEDEFRFCVYEIPQLRASFGVP--LLAVPRGQMPEDALDDGMML  453
            +G  LP  +I   P ++E+ +   VY+   L   +     LL+ P + +  +    G  +
Sbjct  383  LGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAKM  442

Query  454  GLATRDEHHLLWLTPEHPMLQQPELSPW-SPDALILSRMENAIHRSGAQFIGLQETKSIL  512
            G        + WL + ++M  +    P    +  I++ +   ++R  A+FIG+QET+ ++
Sbjct  443  G-------SFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLM  495

Query  513  AWLESEQPELAQELQRIMPLSRFASVLQRLASERVPLRSVRPIAEALIDIGQHERDINAL  572
              +E+   EL +ELQR +P+++ A +LQRL  E +++R +R I  AL+  +  E+DI  L
Sbjct  496  DAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVML  555

Query  573  TDYVRLELKAQICHQYSQDDS-LTVWLLTPETEELLRDALRQTQNETFFALTQEYAATLL  631
            T+YVR+ L+ ++C+++S++ + ++V  L    E+L+RD++RQT + T+ AL +  +  +L
Sbjct  556  TEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLIL  615

Query  632  GQLRRAFPPMMAPSSLILVAQDLRSPLRILLQDEFHHVPVLSFTELESHLSINVAGRIDL  691
             +++ AF+      +++L + D+R  +R +++ ++  +PVLS  EL  +++++VAG I+L
Sbjct  616  NKIKNAFAE--NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

Query  692  LD  693
            ++
Sbjct  674  IG  675

133) hrcV in NC_004578


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  361 bits (1355),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 271/669 (41%), Positives = 442/669 (67%), Gaps = 34/669 (5%)

Query  33   MMITPLPTGLVDVLIAVNICISCLLIMLAMHLPRPLAFSTFPAVLLLTTMFRLALSISTT  92
            MMI PLPT +VD+LIA+N+ +S +L+M+++ L  PL FS FP++LL+TT++RLAL+ISTT
Sbjct  31   MMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTT  90

Query  93   RLILLNQDAGHIVEAFGQFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVGARFTLD  152
            RL+LL++DAG+IVEAFGQFVVGGNLAVG++IF I+TVV+F+VITKGSERVAEV+ARF+LD
Sbjct  91   RLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLD  150

Query  153  AMPGKQMSIDSDLRANLISVYEARNRRSELNKESQLFGAMDGAMKFVNGDAIASLIIVAI  212
            +MPGKQMSID+D+RA  I   EA+  R  ++KES+LFGAMDGAMKFV+GDAIA++I++ I
Sbjct  151  GMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILI  210

Query  213  NMIGGISIGVVQHGMTAGDALQLYTVLTIGDGLIAQIPALLISVTCGMIITRVPNTEAGV  272
            N+IGGI+IGV+QH M+A +A++ Y+VL+IGDGL AQIP+LLIS+T G+I+TRVP ++   
Sbjct  211  NIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSN---  267

Query  273  EANIGREIAEQITSQPKA-WIIAAVAMLGFAALPGMPTGVFITIAIICGAGGMLQLQRAK  331
              +++ E+A Q+  QP A W+ AA+ +  FA LPG P  +FIT+A   +A + L L R +
Sbjct  268  KQSLANELAVQVGRQPDALWLAAAI-LTVFALLPGFPFLIFITLAAAVAAPAFL-LYRKN  325

Query  332  PKAEEQGAVAVAPEMNGKEDLRTFSPSRQFVLQFHPGQNSALVDALVSEIRQRRNRLVVQ  391
             +  ++G    ++E  G  + R  + +  ++L+  +  + +    L  +I   R R   +
Sbjct  326  RRISQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHHP---HLGRDIDGLRWRWFEH  382

Query  392  FGLTLPSFIIEYVDHLQPDEFRFTVYDVPMLKATFTQTHVAVD---VRQFNGEDVPAAIS  448
            +G+ LP   I     L  + +   VY+  +L   +    + +          ++V +A  
Sbjct  383  LGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAKM  442

Query  449  GTTDRQEDQWVWLPAEQGGE-----LATVSSMTLITERMERALQSCGPQFIGLQETKAIL  503
            G+ D       WL A Q+ +     ++ V +   I   + R ++   ++FIG+QET+ ++
Sbjct  443  GSFD-------WLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLM  495

Query  504  GWLESEQPELAQEMQRVLTLTRFSAVLQRLASECVPLRAIRVIAETLIEHCQHERDTNVL  563
            + +E+   EL +E+QR + + + + +LQRL  E +++R +R I  +L+     E+D  +L
Sbjct  496  DAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVML  555

Query  564  TDYVRIALKSQIYHQYCGADGLQVWL----LTPESEGLLRDGLRQTQTETFFALSNDISQ  619
            T+YVRIAL+ ++ +++      + W+    L    E L+RD++RQT + T+ AL +  S 
Sbjct  556  TEYVRIALRRHLCRRFSHN---KTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSL  612

Query  620  MLVQQLHIAFPLRAPEQAVLLVAQDLRSPLRTLLREEFYHVPVLSFAEISNAAKVRVMGR  679
            ++++++  AF+    ++AVLL + D+R  +R ++  +++ +PVLS  E+++  +++V G 
Sbjct  613  LILNKIKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  680  FDL-EDDLE  687
            ++L  D+L+
Sbjct  671  IELIGDELD  679

134) sctV, cdsV in NC_015702


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  360 bits (1351),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 295/692 (43%), Positives = 480/692 (70%), Gaps = 58/692 (8%)

Query  3    MIIIPVNPHIIDFLIALNLTASVALLMVALYIPSAVHLSIFPSLLLITTLYRLGVNIAST  62
            M+I+P+   ++D+LIA+NL+ SV LLM+++Y+  ++++S+FPSLLLITTLYRL++ I++T
Sbjct  31   MMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTT  90

Query  63   RQILLHANAGDiifqfgqfvvggnfvvggvifliiTLVQFIVITKGAERVAEVAARFTLD  122
            R +LL+ +AG+I+  FGQFVVGGN+ VG +IF IIT+VQFIVITKG+ERVAEV+ARF+LD
Sbjct  91   RLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLD  150

Query  123  AMPGKQMSIDADMRAGILDSNQAREKRLAIQKESQLYGAMDGAMKFVKGDaiagivitli  182
            +MPGKQMSID+DMRAG +DS +A+  R  +QKES+L+GAMDGAMKFVKGDAIAGI++ LI
Sbjct  151  GMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILI  210

Query  183  niiggmiigmtlngMPAMDAVTTYSLLSIGDGLVSQIPALLISITAGIVTTRVSSDKAES  242
            NIIGG+ IG+  + M+A +A+ TY++LSIGDGL +QIP+LLISITAGI+ TRV++ + +S
Sbjct  211  NIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQS  270

Query  243  NLGSEISGQILKQPKALLISAGFLMGMAAIPGFPKPPFLIFAS------ALGLLGYSLWV  296
             L++E++ Q+ +QP AL ++A++L   A +PGFP   FLIF +      A ++L Y    
Sbjct  271  -LANELAVQVGRQPDALWLAAAILTVFALLPGFP---FLIFITLAAAVAAPAFLLYR---  323

Query  297  SEKQKVEaartgggagggtissaadtstVDMGVQGHKVVSGGGIDSYALTLPVVLECGSS  356
              ++++     + G++             + G  G+++ +G        ++P++L+C+S+
Sbjct  324  -KNRRISQDGRANGGSE------------EGGATGQRMTPG--------AVPLMLHCASN  362

Query  357  LSQEIQKAQKGQSFIDKMIPKMRQALYADLGVRFPGVHVRTDSPILEKDEYSIHLNEVPI  416
            L +         + +++ I  +R   + +LGV +P V++R D P L  +  S+++ +   
Sbjct  363  LHH---------PHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQ---  409

Query  417  VKGRVLEGFVLTNESEENLKRYNLSYTTYKSALG--LPSL-WVESKNIDLLNKAGVKYWN  473
               RVLE  VL  +S   L R   S  T +  LG  + S+ W+++K+       G+ Y +
Sbjct  410  --ERVLEV-VLPPDSL-LLTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  474  SLEVMILHISYFFRTYANEFVGIQEVKSMLEFVEKSFPDLVKEVTRLIPLQKMTDIFKRL  533
            + + +I  ++  F  Y+ EF+G+QE + +++ +E  + +LVKE+ R IP+ K+++I++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  534  IQEQVSIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKRYISYKYSQGQSVLSVYILDP  593
            ++E++SI+DLRTI+ +L  WA  EKD V+LTEYVR +L+R +  ++S+ ++ +SV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  594  EIEDMVRGAIKQTSAGSYLALDPDSVQLILQGVRNTVAppppggqppVLLTAIDVRRFVR  653
             +E+++R++I+QTS+G+Y AL+     LIL+ ++N+ A      Q +VLLT++DVRRFVR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFA----ENQDAVLLTTLDVRRFVR  641

Query  654  KLIEMEFTDISVVSYQEIVPEIRIQPLGRVQL  685
            K+IE ++  ++V+S QE+  E+ ++  G ++L
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

135) D781_3944 in NC_020064


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  359 bits (1350),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 281/684 (42%), Positives = 462/684 (68%), Gaps = 32/684 (4%)

Query  18   RSEIVGAAFALALVFMLIVPLPLGLIDMLIAVNICLSSLLIVLAMYLPKPLAFSTFPAVL  77
            R +I  A   L  VFM+I+PLP  ++D+LIA+N+ +S +L+++++YL  PL FS FP++L
Sbjct  16   RQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLL  75

Query  78   LLTTMFRLALSISVTRQILIQQDAGHIVEAFGNFVVGGNLAVGMVMFLILTVVNFLVITK  137
            L+TT++RLAL+IS TR +L+Q+DAG+IVEAFG+FVVGGNLAVGM++F I+TVV+F+VITK
Sbjct  76   LITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITK  135

Query  138  GSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIDVHQARNRRNELAKESQLFGAMDGAMK  197
            GSERVAEV+ARF+LD+MPGKQMSID+D+RAG ID  +A+  R+ + KES+LFGAMDGAMK
Sbjct  136  GSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMK  195

Query  198  FVKGDAIAGLVILCINLIGGFSIGVLQLDMAPGDAMHTYSILTIGDGLIAQIPALLISLT  257
            FVKGDAIAG++++ IN+IGG++IGV+Q  M++ +AM+TY++L+IGDGL AQIP+LLIS+T
Sbjct  196  FVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISIT  255

Query  258  AGMIITRVSSESDSTETPNVGREIAEQLTSQPKA-WILASMGMIGFALVPGMPGVVFSLL  316
            AG+I+TRV+    +++  +++ E+A Q+  QP A W LA+  +  FAL+PG P ++F  L
Sbjct  256  AGIIVTRVP----GSNKQSLANELAVQVGRQPDALW-LAAAILTVFALLPGFPFLIFITL  310

Query  317  ALITLGGGGFQVWRARQEMLLAKPQIENEVIPPELNGREDLRQFNPTRPWLIQFHTSRRG  376
            A  ++++ +F + R  + +    +Q       +E  G  + R    + P +++  ++ + 
Sbjct  311  A-AAVAAPAFLLYRKNRRI----SQDGRANGGSEEGGATGQRMTPGAVPLMLHCASNLHH  365

Query  377  AAETLDLVQEIRRLRNRIVYHFGFTLPAFDIEFTDKQPVDEFRFSVYEIPKVVGTFDSAL  436
            +    +L ++I  LR R   H+G  LP  +I      + + +   VY+  +V+    ++ 
Sbjct  366  P----HLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQ-ERVLEVVLPPD  420

Query  437  TALDVRQLESLSEAEREGAVPGDEARGEEDYLWLAAGHPLLARE-DLTRHSAGELLLTRM  495
            + L  R   SL   ++   V G        + WL A +++ AR  ++    + + ++T +
Sbjct  421  SLLLTRPCSSLVTNNQ---VLGAKM---GSFDWLDAKQAMQARTLGIPYVEGHQRIITCL  474

Query  496  EDAIHASSPHFIGLQETRALMSWLDAEQPELAQELQRVMPLTRFSGVLQKLVAERIPLRS  555
               ++  +++FIG+QETR LM  +++   EL +ELQR +P+ + + +LQ+LV E I++R 
Sbjct  475  TRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRD  534

Query  556  VRAIGEALIEHGQHERDVNLLTEQVRITLKTHLCHQYGQPDGIHAWL----LTPELEEAL  611
            +R+I  AL+  +  E+D+ +LTE VRI+L+ HLC+++++     +W+    L   +E+ +
Sbjct  535  LRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHN---KTWISVLRLGDGVEHLI  591

Query  612  RDSLRQTQNDIFFALSQQQIQLIHQEVKQAYAPGQDKQAVLLAAQDLRGPLRALIQERFH  671
            RDS+RQT ++ + AL ++Q  LI + +K+A+A  QD  AVLL++ D+R  +R +I+  + 
Sbjct  592  RDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQD--AVLLTTLDVRRFVRKIIERDLF  649

Query  672  AVPVLSFAELEPALAVQVLGRLDV  695
             +PVLS  EL   + ++V G +++
Sbjct  650  VLPVLSWQELGDEMNLKVAGTIEL  673

136) SG2090 in NC_007712


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  359 bits (1350),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 267/652 (41%), Positives = 451/652 (70%), Gaps = 42/652 (6%)

Query  36   LVDFLIGLNIVIAMLVFIGAFYIDRILSFSTFPAVLLITTLFRLALTISTSRLILTDADA  95
            +VD+LI++N+ +++++++ ++Y+   L FS FP++LLITTL+RLALTIST+RL+L + DA
Sbjct  40   MVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDA  99

Query  96   GEIIATFGQFVIGDNLVVGFVIFAIVTVVQFIVITKGSERVAEVAARFCLDGMPGKQMSI  155
            GEI+ +FGQFV+G+NL VG +IF+I+TVVQFIVITKGSERVAEV+ARF LDGMPGKQMSI
Sbjct  100  GEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSI  159

Query  156  DADLRGGVIDAEGARQRRSVLERESQLYGAFDGAMKFIKGDAIASIIVAFVNFIGGIAVG  215
            D+D+R+G ID+  A++ R  +++ES+L+GA DGAMKF+KGDAIA+IIV ++N+IGGI++G
Sbjct  160  DGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIG  219

Query  216  MNQHHMDLSQALSTFTLLTIGDGLVGQIPALLISISAGLIVTRVNGDG-DNLGRNIMQQL  274
            + QH M   +A++T+++L+IGDGL +QIP+LLISI+AG+IVTRV G   ++L+ ++  Q+
Sbjct  220  VMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQV  279

Query  275  LGNPFVLLVTAVLALSIGMLPGFPLPVFVmlamalgtll----lmRQRQTRVVPLPAAAD  330
              +P  L ++A +   +++LPGFP+ +F+ LA A+++         +R ++     ++++
Sbjct  280  GRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSE  339

Query  331  YAGGYPERIMPEALAVILQ-VSRANYARLEKEQLCERLRGQFLIDFGVALPPLMLCPCEH  389
             +G+  +R+ P A++++L+  S  + ++L ++   + LR + + ++GV+LP + +  C+ 
Sbjct  340  EGGATGQRMTPGAVPLMLHCASNLHHPHLGRD--IDGLRWRWFEHLGVPLPEVEI-RCDP  396

Query  390  T-DDRTVVVVLNEIRADVFTLHFDMLRRVIPGD-----RPCPPDVTLHQEQEAV-----W  438
            T  + T+ V + + R         +L  V+P D     RPC++ VT +Q   A      W
Sbjct  397  TLAENTLSVQVYQER---------VLEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSFDW  447

Query  439  AALDDRE----RLLATGCVLRPAVDELYHCFAVMLTHHVNEFFGVQETKHLLDQMESHAP  494
              LD ++    R L+   V   + + +  C++ ++ +   EF+GVQET+ L+D ME++  
Sbjct  448  --LDAKQAMQARTLGIPYV--EGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYG  503

Query  495  DLLKEVLRHATVQRIAELLQRLLMERISIRHLKLIMEAMALWAPREKDVSALVEHVRCAL  554
            +L+KE+ R+  V ++AE+LQRL+ E ISIR+L+ I  A+ +WAP+EKD+  L E VR AL
Sbjct  504  ELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIAL  563

Query  555  ARYICHQFAADN-LLRVIMLSSEVEETLRDSLHTTSAGTFLNLGPQVSEELMELFTSALE  613
             R +C++F+ ++  + V+ L+  VE+ +RDS++ TS+GT+  L  + S  +++ + +A+ 
Sbjct  564  RRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFA  623

Query  614  SLPIAQRDIVLLAAADIRRFIKSLIQHRFRDLEVLSFGELTESVTVNVIKTI  665
                 ++D VLL++ D+RRF++ +I++ +  L VLS  EL + + ++V  TI
Sbjct  624  ----ENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

137) flhA in NC_021505


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  353 bits (1324),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 275/680 (41%), Positives = 473/680 (70%), Gaps = 20/680 (2%)

Query  6    LRSIISRPELLILTLMVMIIAMLIIPLPTPLVDFLIGLNIVIAILVFMGSFYIERILSFS  65
            L  I +R ++++  ++++ + M+I+PLPT +VD+LI++N+ ++++++M S+Y+   L FS
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  66   TFPalllittlfrlalSISTSRLILVQADAGEIIASFGEFVIGDSLVVGFVIFAIVTIVQ  125
             FP+LLLITTL+RLAL+IST+RL+L+Q DAGEI+ +FG+FV+G++L VG +IF+I+T+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  126  FIVITKGSERVAEVAARFSLDGMPGKQMSIDGDLKAGVIDAKEARERRSTLERESQLYGS  185
            FIVITKGSERVAEV+ARFSLDGMPGKQMSIDGD++AG ID+ EA+  R  +++ES+L+G+
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  186  FDGAMkfikgdaiagiiiifVNFLGGIAIGVGQLGMDMSEALSTYTLLTIGDGLVAQIPA  245
             DGAMKF+KGDAIAGII+I++N++GGI+IGV Q  M   EA++TY++L+IGDGL AQIP+
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  246  LLIAIGAGFIVTRVNG-DEANLGRNMMTQLLGHPFVLGITALLAVGVGMLPGFPAAVFLI  304
            LLI+I AG+IVTRV G +  +L+ ++  Q+  +P  L ++A +    ++LPGFP  +F+ 
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  305  IASALVALLFFRHRLEKKTSGNAPVTPLAADEGDAESELGLIENVDNMATETVALMLLVP  364
            +A+A+ A  F+  R +++ S ++     +++EG+A ++         M+  +V+LML  +
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANG-GSEEGGATGQ--------RMTPGAVPLMLHCA  360

Query  365  SARVEALRAARLCERFRSQFFIDYGIRIPEPRLRGTDSLPPGQVAVLINEVRADQFDIHF  424
            S  ++  + +R  + +R + F + G+ +PE  +R   +L+   ++V + + R  +  +  
Sbjct  361  SN-LHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPP  419

Query  425  DLLRVVDYKPELEHLGLDLTTGVDSNMQTSVWVRSTEREKLQNLGHQLRPAYDEFYRCLV  484
            D L +    + L    +     ++++M +  W+ + +  + + LG     + + +  CL 
Sbjct  420  DSLLLTRPCSSL----VTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLT  475

Query  485  TLLARNISEFFGVQESKVLLDEMEARYPDLVKEVYRHASVQKVAELLQRLVAERISVRNM  544
             ++ R  +EF+GVQE++ L+D ME+RY +LVKE+ R+ +V KVAE+LQRLV E IS+R++
Sbjct  476  RVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDL  535

Query  545  KLILETLAHWALREKDVIALVEHVRGGLARYISNKFANGND-LRVLLLSPEFEDVVRRGI  603
            + I+ +L  WA +EKD++ L E VR +L R +  +F++ +  + VL L+   E+++R +I
Sbjct  536  RTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSI  595

Query  604  RQTSTGSFINLEPSASEELMDRLAVGLDSLHIPQKDMVILASVDVRRYIKKLIEGRFREL  663
            RQTS+G++  LE   S  +++++  ++      ++D V+L+++DVRR+++K+IE  +  L
Sbjct  596  RQTSSGTYSALEERQSLLILNKIKNAFAE----NQDAVLLTTLDVRRFVRKIIERDLFVL  651

Query  664  DVVSFGEISDSISVQVIKTL  683
             V+S  E++D ++++V  T+
Sbjct  652  PVLSWQELGDEMNLKVAGTI  671

138) invA in NC_012751


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  351 bits (1319),  Expect = 9e-98, Method: Compositional matrix adjust.
 Identities = 270/659 (41%), Positives = 457/659 (70%), Gaps = 32/659 (4%)

Query  33   TYLVDFLIGLNIVISLLVFMGSFYIDRILNFSTFPAVLLITTLFRLALSISTSRLILNDA  92
            T +VD+LI++N+ +S++++M S+Y+   L+FS FP++LLITTL+RLAL+IST+RL+L + 
Sbjct  38   TTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQH  97

Query  93   DAGEIVRTFGLFVIGDNLvvgfvifgivtivqfivitKGAERVAEVAARFSLDAMPGKQM  152
            DAGEIV +FG FV+G+NL VG +IF I+T+VQFIVITKG+ERVAEV+ARFSLD+MPGKQM
Sbjct  98   DAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQM  157

Query  153  SIDADLKAGVIDSDAAKERRSVLEKESQLYGSFDGAMKFIKGDaiagiivifinfiggis  212
            SID+D++AG IDS  AK  R  ++KES+L+G+ DGAMKF+KGDAIAGIIVI+IN+IGGI+
Sbjct  158  SIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGIT  217

Query  213  vgvsQHGMSMSSALSTYTMLTIGDGLVAQIPSLLIAISAGFIVTRVNGDG-DNMGRTMMS  271
            +GV QH MS   A++TY++L+IGDGL AQIPSLLI+I+AG+IVTRV G   ++++  +  
Sbjct  218  IGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAV  277

Query  272  QLVSNPFALMVTAGLALTIGFLPGFPLFVFVIL--AGVLSGFFIYKHFFEKKKGTEALEK  329
            Q+  +P AL ++A++   +++LPGFP+++F+ L  A   ++F++Y+   +++ + ++  +
Sbjct  278  QVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRK--NRRISQDG--R  333

Query  330  ADSKEEDSVFNETHSIDSSLGLIGNLDKVSSETVPFIMLVSSSDLEKLENQKLVEHLRSQ  389
            A++  E++            G  G  +++++ +VP +ML  +S+L+  +  + ++ LR +
Sbjct  334  ANGGSEEG------------GATG--QRMTPGAVP-LMLHCASNLHHPHLGRDIDGLRWR  378

Query  390  FFIDYGIRLPNILLRASTTVSKNRAVFLINEIRAEEFVLQLDLLRIVNSSDELMQLEIET  449
             F + G+ LP++ +R   T++ N     + + R  E VL  D L +  +   L+    + 
Sbjct  379  WFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV--TNNQ  436

Query  450  VLDNGTV---WVKPEHKETLENMGYQLRSPIDELYHSMAALLSRHVSEYFGIQETKDMLD  506
            VL+       W+ + +      +G       + +   ++ ++ R  +E++G+QET+ ++D
Sbjct  437  VLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMD  496

Query  507  KLENKYPDLMKEIMRHATIQRITEVLQRLLSERISVRNMRLIMESLALWMPREKDVISLV  566
             +E +Y +L+KE+ R+  + +++E+LQRL+ E IS+R++R I  +L +W P+EKD++ L 
Sbjct  497  AMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLT  556

Query  567  EHVRGGLSRYICHKFSVNNELRSIV-LSSEVEDMIRQGIRNTSGGTFLNLEPAVSDQLMD  625
            E VR +L R +C++FS N+   S++ L+  VE++IR++IR+TS+GT+  LE    + L+ 
Sbjct  557  EYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEE--RQSLLI  614

Query  626  LFSVNLENLLIDHKDLVLLSSVDTRRFVKKFIESRFRDLEVMSFGEISETVSVNVLKTI  684
            L  ++  N + +++D VLL+++D RRFV+K+IE  +  L V+S  E+++ ++++V  TI
Sbjct  615  LNKIK--NAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

139) SG0563 in NC_007712


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  350 bits (1316),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 270/662 (41%), Positives = 458/662 (70%), Gaps = 16/662 (2%)

Query  9    IKSRPELIILAMMVLVIVMLIIPLPTYLIDFLIGLNLTMAILIFMGSFYISRILDFSSFP  68
            I +R ++++  M+++ + M+I+PLPT ++D+LI++NL+ +++++M S+Y+   L+FS FP
Sbjct  13   ITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFP  72

Query  69   SILLVTTLFRLAISISTSRLVLMDADAGEIVASFGQFVIGDNLvvgfviffivtvvqfiv  128
            S+LL+TTL+RLA++IST+RLVL++ DAGEIV +FGQFV+G+NL VG +IF I+TVVQFIV
Sbjct  73   SLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIV  132

Query  129  iTKGSERIAEVAARFSLDAMPGKQMSIDADLKAGVLDEDGVKKRREVLEAESQLYGALDG  188
            ITKGSER+AEV+ARFSLD+MPGKQMSID+D++AG +D    K+ RE ++ ES+L+GA+DG
Sbjct  133  ITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDG  192

Query  189  AMKFikgdaiagiiiifvnliggiSVGMVQHGMELSEALTVYTHLSIGDALVAQIPALLI  248
            AMKF+KGDAIAGII+I++N+IGGI++G++QH M   EA+  Y+ LSIGD+L AQIP+LLI
Sbjct  193  AMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLI  252

Query  249  SISGGFIVTRVnnnknnnLGSKIITDLFANQSTLMVTACLALAMGFLPGFPLPVFIVLSA  308
            SI++G+IVTRV  +++++L++ +  ++  +  +L ++A +    ++LPGFP+ +FI L+A
Sbjct  253  SITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAA  312

Query  309  LLIVIYFKDKWSNRNKVKSGEGHRDKTADDEGQSEAVTIDGDIIPETLPLMITFNEAFKP  368
             +    F      R++ + +++ R + + +EG + +      + P ++PLM+     +  
Sbjct  313  AVAAPAFL---LYRKNRRISQDGRANGGSEEGGATG----QRMTPGAVPLMLHCASNLHH  365

Query  369  KLEQHNLSSLLKKNFFIEYGVRLPEITIGYAPKSACDSMSIAINEIPVADYTVMPGMHKV  428
                +++ + L+   F + GV LPE+ I   P  A +++S+ + +  V +  V+P  + +
Sbjct  366  PHLGRDIDG-LRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLE-VVLPP-DSL  422

Query  429  LINGEELKMLDNSVQSINTPQGISYWLPEEKADNAQKMGYVTRSAIDEFYFCISTLLTHN  488
            L+      ++ N+ Q + +  G   WL   +A +A+ +G     + + +  C++ ++ + 
Sbjct  423  LLTRPCSSLVTNN-QVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERY  481

Query  489  ISEFFGIQETKMLLDDLEKKYPELLKESYRNNTVQRISEVFQRLLKERISIRNMKLILES  548
             +EF+G+QET+ L+D +E +Y EL+KE  R+  V +++E++QRL+ E ISIR+++ I+ +
Sbjct  482  TAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGA  541

Query  549  LVQWGPKEKDPIMLVEHVRGALGRYICNRFSYLGK-ICALVFTHDIEEKVRGGIRQTSGG  607
            LV W+PKEKD +ML E VR AL R +C RFS     I  L + +++E+ +R++IRQTS+G
Sbjct  542  LVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSG  601

Query  608  SFINLTPPEIDEILNYLTECLNKNGISSRDIILLVSVDIRRFIKKLVEGRYPELEVLSFN  667
            ++  L   +   ILN + + +  N    +D +LL ++D+RRF++K++E     L VLS +
Sbjct  602  TYSALEERQSLLILNKIKNAFAEN----QDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQ  657

Query  668  EM  669
            E+
Sbjct  658  EL  659

140) sctV in NC_006349


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  349 bits (1310),  Expect = 4e-97, Method: Compositional matrix adjust.
 Identities = 281/683 (42%), Positives = 469/683 (69%), Gaps = 38/683 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSILLF  72
            ++ ++V+++  V +MILPLP  ++D+L+++N+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITIVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT+VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGDAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A +A N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDDGDGTSLGSEIARQLGGSHRALYFAAVLLIGFAAVPGFPAALFVLLSGM  312
            +++TRV++ + ++ +  L+ +++RQ      AL +AA +L  FA +PGFP  +F+ L++ 
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQ----PDALWLAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  LAFAGYRLQKGARRTTARGEPVIALQRAGAKSS--TPSILPRAPLFTCAIGVRVAPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSDALPASTCEILMRDVPQAR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+ +T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAESY-WIDDKAVPAGARAWRAEQVVAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K  +  AR+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAKQ-AMQARTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAHLFLGIQEAQWILDQLGVDYPGLVAEVQKALPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QE++ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSIASFVGEAPRDDVALVTSMDVRRYTRRMIEARLDW  661
            +SI+QT++G + AL   Q   +++ I +  +E   +D  L+T++DVRR+ R++IE  L  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN--QDAVLLTTLDVRRFVRKIIERDLFV  650

Query  662  LPVYSYQELGDQVQLQPVGRVTM  684
            LPV S QELGD+++L+  G + +
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

141) BP1026B_II1731 in NC_017832


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  349 bits (1310),  Expect = 4e-97, Method: Compositional matrix adjust.
 Identities = 281/683 (42%), Positives = 469/683 (69%), Gaps = 38/683 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSILLF  72
            ++ ++V+++  V +MILPLP  ++D+L+++N+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITIVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT+VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGDAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A +A N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDDGDGTSLGSEIARQLGGSHRALYFAAVLLIGFAAVPGFPAALFVLLSGM  312
            +++TRV++ + ++ +  L+ +++RQ      AL +AA +L  FA +PGFP  +F+ L++ 
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQ----PDALWLAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  LAFAGYRLQKGARRTTARGEPVIALQRAGAKSS--TPSILPRAPLFTCAIGVRVAPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSDALPASTCEILMRDVPQAR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+ +T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAESY-WIDDKAVPAGARAWRAEQVVAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K  +  AR+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAKQ-AMQARTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAHLFLGIQEAQWILDQLGVDYPGLVAEVQKALPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QE++ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSIASFVGEAPRDDVALVTSMDVRRYTRRMIEARLDW  661
            +SI+QT++G + AL   Q   +++ I +  +E   +D  L+T++DVRR+ R++IE  L  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN--QDAVLLTTLDVRRFVRKIIERDLFV  650

Query  662  LPVYSYQELGDQVQLQPVGRVTM  684
            LPV S QELGD+++L+  G + +
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

142) BURPS668_A2281 in NC_009075


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  349 bits (1310),  Expect = 4e-97, Method: Compositional matrix adjust.
 Identities = 281/683 (42%), Positives = 469/683 (69%), Gaps = 38/683 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSILLF  72
            ++ ++V+++  V +MILPLP  ++D+L+++N+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITIVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT+VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGDAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A +A N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDDGDGTSLGSEIARQLGGSHRALYFAAVLLIGFAAVPGFPAALFVLLSGM  312
            +++TRV++ + ++ +  L+ +++RQ      AL +AA +L  FA +PGFP  +F+ L++ 
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQ----PDALWLAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  LAFAGYRLQKGARRTTARGEPVIALQRAGAKSS--TPSILPRAPLFTCAIGVRVAPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSDALPASTCEILMRDVPQAR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+ +T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAESY-WIDDKAVPAGARAWRAEQVVAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K  +  AR+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAKQ-AMQARTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAHLFLGIQEAQWILDQLGVDYPGLVAEVQKALPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QE++ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSIASFVGEAPRDDVALVTSMDVRRYTRRMIEARLDW  661
            +SI+QT++G + AL   Q   +++ I +  +E   +D  L+T++DVRR+ R++IE  L  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN--QDAVLLTTLDVRRFVRKIIERDLFV  650

Query  662  LPVYSYQELGDQVQLQPVGRVTM  684
            LPV S QELGD+++L+  G + +
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

143) Pmen_0039 in NC_009439


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  349 bits (1311),  Expect = 4e-97, Method: Compositional matrix adjust.
 Identities = 271/659 (42%), Positives = 437/659 (67%), Gaps = 25/659 (3%)

Query  33   MMITPMPTELMDVLIAINICISCLMIMLAMHLPRPLAFSTFPAVLLLTTMFRLALSISTT  92
            MMI P+PT ++D+LIAIN+ +S +++M+++ L  PL FS FP++LL+TT++RLAL+ISTT
Sbjct  31   MMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTT  90

Query  93   RLILLEQDAGHIVEAFGEFVVGGNLAVGVVIFLILTIVNFLVITKGSERVAEVGARFTLD  152
            RL+LL++DAG+IVEAFG+FVVGGNLAVG++IF I+T+V+F+VITKGSERVAEV+ARF+LD
Sbjct  91   RLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLD  150

Query  153  AMPGKQMSIDSDLRANLISVSEARNRRAELNKESQLFGAMDGAMKFVNgdaiasliiiai  212
            +MPGKQMSID+D+RA  I   EA+  R  ++KES+LFGAMDGAMKFV+GDAIA++I+I I
Sbjct  151  GMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILI  210

Query  213  nmiggmaigVAQMGMSAGDALQVYTILTIGDGLVSQIPALMISVTAGIVITRVPNEQRQQ  272
            N+IGG++IGV Q  MSA +A++ Y++L+IGDGL +QIP+L+IS+TAGI++TRVP  ++Q 
Sbjct  211  NIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQ-  269

Query  273  TNIGREIAEQLTSQPKA-WIIASVAMLGFAALPGMPTLTFiiiaiicgcggllqlqrarT  331
             +++ E+A Q+  QP A W+ A++ +  FA LPG P L F  I++  + ++   L   + 
Sbjct  270  -SLANELAVQVGRQPDALWLAAAI-LTVFALLPGFPFLIF--ITLAAAVAAPAFLLYRKN  325

Query  332  SSAAEDDPEVIPPEMNGQEDLRTFSPSRQFVLQFHPSQDAHQVAALLSEIRQRRNRLVVQ  391
               ++D+     +E  G  + R  + +  ++L  H + + H+ + L  +I   R R   +
Sbjct  326  RRISQDGRANGGSEEGGATGQRMTPGAVPLML--HCASNLHH-PHLGRDIDGLRWRWFEH  382

Query  392  YGLTLPSFIIEQSPLLPPDEFRFSVYEVPLFKATLTQSQ--LAVPARSLPPGAVCGSNER  449
             G+ LP   I   P L+ + +   VY+  ++   L      L+ P  SL       +   
Sbjct  383  LGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAKM  442

Query  450  QEEDWVWMPADDPMLQNDELEI--VSAATLIVERMERAMQACGPQFIGLQETKAILGWLE  507
               D  W+ A ++M Q   L I  V +   I+  + R  +   ++FIG+QET+ +++ +E
Sbjct  443  GSFD--WLDAKQAM-QARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAME  499

Query  508  SEQPELAQEMQRVLPLARFSAILQRLAAECVPLRSVRLIAETLIEHAQHERDVTVLTDYV  567
            +   EL +E+QR +P+++ + ILQRL  E +++R +R I  +L+  A  E+D+ +LT+YV
Sbjct  500  GRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYV  559

Query  568  RIALKSQIYHQYSSAEGLLVWL----LTPESEGILRDGLRQTQTETFFALNHETSQLLLQ  623
            RIAL+ ++ +++S       W+    L    E ++RD++RQT + T+ AL++  S L+L+
Sbjct  560  RIALRRHLCRRFSHNKT---WISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILN  616

Query  624  QLHMAFPMRAPEQAVLLVPQDLRSPLRTLLQEEFHHVPVLSFAEISSAARIKVMGRFDL  682
            ++  AF+    ++AVLL   D+R  +R +++ ++  +PVLS  E++    +KV G ++L
Sbjct  617  KIKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

144) sctV in NC_008835


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  349 bits (1309),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 281/683 (42%), Positives = 469/683 (69%), Gaps = 38/683 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSILLF  72
            ++ ++V+++  V +MILPLP  ++D+L+++N+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITIVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT+VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGDAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A +A N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDDGDGTSLGSEIARQLGGSHRALYFAAVLLIGFAAVPGFPAALFVLLSGM  312
            +++TRV++ + ++ +  L+ +++RQ      AL +AA +L  FA +PGFP  +F+ L++ 
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQ----PDALWLAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  LAFAGYRLQKGARRTTARGEPVIALQRAGAKSS--TPSILPRAPLFTCAIGVRVAPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSDALPASTCEILMRDVPQAR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+ +T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAESY-WIDDKAVPAGARAWRAEQVVAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K  +  AR+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAKQ-AMQARTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAHLFLGIQEAQWILDQLGVDYPGLVAEVQKTLPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QE++ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSIASFVGEAPRDDVALVTSMDVRRYTRRMIEARLDW  661
            +SI+QT++G + AL   Q   +++ I +  +E   +D  L+T++DVRR+ R++IE  L  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN--QDAVLLTTLDVRRFVRKIIERDLFV  650

Query  662  LPVYSYQELGDQVQLQPVGRVTM  684
            LPV S QELGD+++L+  G + +
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

145) sctV in NC_009079


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  349 bits (1309),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 281/683 (42%), Positives = 469/683 (69%), Gaps = 38/683 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSILLF  72
            ++ ++V+++  V +MILPLP  ++D+L+++N+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITIVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT+VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGDAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A +A N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDDGDGTSLGSEIARQLGGSHRALYFAAVLLIGFAAVPGFPAALFVLLSGM  312
            +++TRV++ + ++ +  L+ +++RQ      AL +AA +L  FA +PGFP  +F+ L++ 
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQ----PDALWLAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  LAFAGYRLQKGARRTTARGEPVIALQRAGAKSS--TPSILPRAPLFTCAIGVRVAPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSDALPASTCEILMRDVPQAR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+ +T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAESY-WIDDKAVPAGARAWRAEQVVAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K  +  AR+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAKQ-AMQARTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAHLFLGIQEAQWILDQLGVDYPGLVAEVQKTLPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QE++ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSIASFVGEAPRDDVALVTSMDVRRYTRRMIEARLDW  661
            +SI+QT++G + AL   Q   +++ I +  +E   +D  L+T++DVRR+ R++IE  L  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN--QDAVLLTTLDVRRFVRKIIERDLFV  650

Query  662  LPVYSYQELGDQVQLQPVGRVTM  684
            LPV S QELGD+++L+  G + +
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

146) BURPS1106A_A2198 in NC_009078


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  349 bits (1309),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 280/683 (41%), Positives = 469/683 (69%), Gaps = 38/683 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSILLF  72
            ++ ++V+++  V +MILPLP  ++D+L+++N+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITIVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT+VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGDAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A +A N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDDGDGTSLGSEIARQLGGSHRALYFAAVLLIGFAAVPGFPAALFVLLSGM  312
            +++TRV++ + ++ +  L+ +++RQ      AL +AA +L  FA +PGFP  +F+ L++ 
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQ----PDALWLAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  LAFAGYRLQKGARRTTARGEPVIALQRAGAKSS--TPSILPRAPLFTCAIGVRVAPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSDALPASTCEILMRDVPQAR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+ +T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAESY-WIDDKAVPAGARAWRAEQVVAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K  +  AR+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAKQ-AMQARTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAHLFLGIQEAQWILDQLGVDYPGLVAEVQKALPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QE++ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSVASFVGEAPRDDVALVTSMDVRRYTRRMIEARLDW  661
            +SI+QT++G + AL   Q   +++ + +  +E   +D  L+T++DVRR+ R++IE  L  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN--QDAVLLTTLDVRRFVRKIIERDLFV  650

Query  662  LPVYSYQELGDQVQLQPVGRVTM  684
            LPV S QELGD+++L+  G + +
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

147) BPC006_II2177 in NC_018529


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  349 bits (1309),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 280/683 (41%), Positives = 469/683 (69%), Gaps = 38/683 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSILLF  72
            ++ ++V+++  V +MILPLP  ++D+L+++N+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITIVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT+VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGDAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A +A N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDDGDGTSLGSEIARQLGGSHRALYFAAVLLIGFAAVPGFPAALFVLLSGM  312
            +++TRV++ + ++ +  L+ +++RQ      AL +AA +L  FA +PGFP  +F+ L++ 
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQ----PDALWLAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  LAFAGYRLQKGARRTTARGEPVIALQRAGAKSS--TPSILPRAPLFTCAIGVRVAPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSDALPASTCEILMRDVPQAR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+ +T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAESY-WIDDKAVPAGARAWRAEQVVAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K  +  AR+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAKQ-AMQARTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAHLFLGIQEAQWILDQLGVDYPGLVAEVQKALPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QE++ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSVASFVGEAPRDDVALVTSMDVRRYTRRMIEARLDW  661
            +SI+QT++G + AL   Q   +++ + +  +E   +D  L+T++DVRR+ R++IE  L  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN--QDAVLLTTLDVRRFVRKIIERDLFV  650

Query  662  LPVYSYQELGDQVQLQPVGRVTM  684
            LPV S QELGD+++L+  G + +
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

148) BPSS1620 in NC_006351


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  349 bits (1309),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 280/683 (41%), Positives = 469/683 (69%), Gaps = 38/683 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSILLF  72
            ++ ++V+++  V +MILPLP  ++D+L+++N+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITIVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT+VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGDAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A +A N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDDGDGTSLGSEIARQLGGSHRALYFAAVLLIGFAAVPGFPAALFVLLSGM  312
            +++TRV++ + ++ +  L+ +++RQ      AL +AA +L  FA +PGFP  +F+ L++ 
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQ----PDALWLAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  LAFAGYRLQKGARRTTARGEPVIALQRAGAKSS--TPSILPRAPLFTCAIGVRVAPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSDALPASTCEILMRDVPQAR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+ +T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAESY-WIDDKAVPAGARAWRAEQVVAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K  +  AR+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAKQ-AMQARTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAHLFLGIQEAQWILDQLGVDYPGLVAEVQKALPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QE++ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSVASFVGEAPRDDVALVTSMDVRRYTRRMIEARLDW  661
            +SI+QT++G + AL   Q   +++ + +  +E   +D  L+T++DVRR+ R++IE  L  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN--QDAVLLTTLDVRRFVRKIIERDLFV  650

Query  662  LPVYSYQELGDQVQLQPVGRVTM  684
            LPV S QELGD+++L+  G + +
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

149) BDL_4974 in NC_021877


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  349 bits (1309),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 280/683 (41%), Positives = 469/683 (69%), Gaps = 38/683 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSILLF  72
            ++ ++V+++  V +MILPLP  ++D+L+++N+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITIVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT+VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGDAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A +A N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDDGDGTSLGSEIARQLGGSHRALYFAAVLLIGFAAVPGFPAALFVLLSGM  312
            +++TRV++ + ++ +  L+ +++RQ      AL +AA +L  FA +PGFP  +F+ L++ 
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQ----PDALWLAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  LAFAGYRLQKGARRTTARGEPVIALQRAGAKSS--TPSILPRAPLFTCAIGVRVAPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSDALPASTCEILMRDVPQAR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+ +T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAESY-WIDDKAVPAGARAWRAEQVVAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K  +  AR+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAKQ-AMQARTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAHLFLGIQEAQWILDQLGVDYPGLVAEVQKALPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QE++ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSVASFVGEAPRDDVALVTSMDVRRYTRRMIEARLDW  661
            +SI+QT++G + AL   Q   +++ + +  +E   +D  L+T++DVRR+ R++IE  L  
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN--QDAVLLTTLDVRRFVRKIIERDLFV  650

Query  662  LPVYSYQELGDQVQLQPVGRVTM  684
            LPV S QELGD+++L+  G + +
Sbjct  651  LPVLSWQELGDEMNLKVAGTIEL  673

150) lcrD in NC_012686


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  345 bits (1295),  Expect = 7e-96, Method: Compositional matrix adjust.
 Identities = 287/695 (42%), Positives = 478/695 (69%), Gaps = 33/695 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIAGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAILFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYYALTLPVILELG  376
             +A   A  ++LL  K+           +    A +G+  +G  ++   + ++P++L+ +
Sbjct  309  TLAAAVAAPAFLLYRKNRR--------ISQDGRANGGSEEGGATGQRMTPGAVPLMLHCA  360

Query  377  KDLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNE  436
             +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + +
Sbjct  361  SNL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQ  409

Query  437  VPYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIK  493
               +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I 
Sbjct  410  ERVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIP  462

Query  494  YWSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIF  553
            Y    + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI+
Sbjct  463  YVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEIL  522

Query  554  KRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYL  613
            +RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  
Sbjct  523  QRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLR  582

Query  614  LDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRR  673
            L+  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR
Sbjct  583  LGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRR  638

Query  674  YVRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  708
            +VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

151) O179_00475 in NC_022110


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  345 bits (1294),  Expect = 8e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFX  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEITRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

152) lcrD in NC_007899


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1292),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 293/695 (43%), Positives = 477/695 (69%), Gaps = 33/695 (4%)

Query  17   ALNMINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQL  76
            +L MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFS  316
            SLLIS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  ILSFIFGLLGVILLAKKNSTAKKgasgasttvgaaadgaatagdNPDDYSLTLPVILELG  376
             L+        +LL +KN   ++ + ++ +  G+  +GA+     P+    ++P++L+ +
Sbjct  309  TLA-AAVAAPAFLLYRKN---RRISQDGRANGGSEEGGATGQRMTPG----AVPLMLHCA  360

Query  377  KDLSALIQHRTKSGQSFIDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGFDYMILLNE  436
             +L     H+   G+      I  +R   ++++G+  P +++R D P+L      + + +
Sbjct  361  SNL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQ  409

Query  437  VPYVRGKIPPHHVLTNEVEENLKRYNLPFITYKNAAGLPSA---WVSEDAKTILEKAAIK  493
               +   +PP+ +L       L R   +++T ++  G   +   W+           +I 
Sbjct  410  ERVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIP  462

Query  494  YWTPLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIF  553
            Y    + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI+
Sbjct  463  YVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEIL  522

Query  554  KRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYL  613
            +RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  
Sbjct  523  QRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLR  582

Query  614  LDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRR  673
            L+  +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR
Sbjct  583  LGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRR  638

Query  674  YVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQI  708
            +VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

153) lcrD in NC_010287


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

154) lcrD in NC_016798


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

155) CTO_0095 in NC_017437


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

156) A363_00093 in NC_020966


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

157) A5291_00092 in NC_020939


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

158) lcrD in NC_007429


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

159) lcrD in NC_012687


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

160) sctV in NC_017434


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

161) sctV in NC_017436


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

162) SOTOND1_00092 in NC_020967


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

163) SOTOND5_00092 in NC_020943


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

164) SOTOND6_00092 in NC_020968


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

165) lcrD in NC_000117


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

166) lcrD in NC_017951


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

167) lcrD in NC_017953


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

168) G11074_00465 in NC_017440


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

169) G11222_00470 in NC_017430


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

170) CTG9301_00465 in NC_017432


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

171) G9768_00465 in NC_017429


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

172) SOTONG1_00091 in NC_020941


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

173) SOTONIA1_00092 in NC_020970


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

174) CTJTET1_00470 in NC_021892


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

175) SOTONK1_00092 in NC_020965


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

176) L1115_00091 in NC_020929


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

177) L1224_00091 in NC_020973


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

178) L1440_00091 in NC_020937


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

179) L225667R_00091 in NC_020930


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

180) CTLFINAL_01820 in NC_021052


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

181) CTLINITIAL_01820 in NC_021050


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

182) L2B795_00091 in NC_020938


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

183) L2B8200_00091 in NC_020945


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

184) L2BAMS1_00091 in NC_020933


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

185) L2BAMS2_00091 in NC_020934


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

186) L2BAMS3_00091 in NC_020977


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

187) L2BAMS4_00091 in NC_020978


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

188) L2BAMS5_00091 in NC_020936


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

189) L2BCAN1_00093 in NC_020935


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

190) L2BCAN2_00091 in NC_020932


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

191) L2BCV204_00091 in NC_020976


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

192) lcrD in NC_010280


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

193) L2BUCH2_00091 in NC_020931


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

194) L3404_00091 in NC_020974


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

195) CTRC69_00470 in NC_021895


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

196) CTRC342_00470 in NC_021890


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

197) CTRC852_00475 in NC_021888


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

198) CTRC943_00465 in NC_021896


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

199) CTRC953_00470 in NC_021889


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

200) CTRC966_00475 in NC_021898


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

201) CTRC971_00475 in NC_021899


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

202) CTRC122_00465 in NC_021891


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

203) CTRC55_00475 in NC_021893


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

204) CTRC3_00470 in NC_021897


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

205) CTRC46_00470 in NC_021887


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

206) A7249_00092 in NC_020944


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

207) SOTONF3_00092 in NC_020964


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

208) SOTONIA3_00092 in NC_020940


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

209) L2BLST_00091 in NC_020975


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

210) L11322_00091 in NC_020972


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

211) O170_00485 in NC_022106


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

212) O173_00485 in NC_022107


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

213) O175_00485 in NC_022108


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

214) O177_00490 in NC_022109


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

215) O169_00485 in NC_022117


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

216) O172_00485 in NC_022118


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

217) O176_00485 in NC_022119


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

218) O178_00480 in NC_022120


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

219) O180_00480 in NC_022121


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  344 bits (1293),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 289/694 (42%), Positives = 481/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKIPPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   +PP+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

220) CAB445 in NC_004552


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  343 bits (1287),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 290/695 (42%), Positives = 475/695 (69%), Gaps = 33/695 (4%)

Query  17   ALNMINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQL  76
            +L MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFS  316
            SLLIS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  ILSLIFGILGVILLAKKNNATKQgasgasttvgaaadgaaaaEDNPDDYSLTLPVILELG  376
             L+        +LL +KN    Q++ + + +  ++A G   + +       ++P++L+ +
Sbjct  309  TLAAA-VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCA  360

Query  377  KDLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNE  436
             +L     ++   G+      I  +R   ++++G+  P +++R D P+L      + + +
Sbjct  361  SNL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQ  409

Query  437  VPYVRGKIPANHVLTNEVEENLKRYNLPFITYKNAAGLPSA---WVSEDAKTILEKAAIK  493
               +   +P++ +L       L R   +++T ++  G   +   W+           +I 
Sbjct  410  ERVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIP  462

Query  494  YWTPLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIF  553
            Y    + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI+
Sbjct  463  YVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEIL  522

Query  554  KRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYL  613
            +RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  
Sbjct  523  QRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLR  582

Query  614  LDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRR  673
            L+  +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR
Sbjct  583  LGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRR  638

Query  674  YVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQI  708
            +VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

221) hrcV in NC_014500


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  343 bits (1286),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 266/660 (41%), Positives = 462/660 (70%), Gaps = 22/660 (3%)

Query  37   PLPTGLIDVLIAFNICISSLLIVLAMYLPKPLAFSTFPAVLLLTTMFRLALSISTTRQIL  96
            PLPT ++D+LIA+N+ +S +L+++++YL  PL FS FP++LL+TT++RLAL+ISTTR +L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  97   LQQDAGHVVEAFGNFVVGGNLAVGLVIFMILTVVNFLVITKGSERVAEVAARFTLDAMPG  156
            LQ+DAG++VEAFG+FVVGGNLAVG++IF I+TVV+F+VITKGSERVAEV+ARF+LD+MPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  157  KQMSIDSDLRAGLIDAQQARQRRENLAKESQLFGAMDGAMKFVKGDAIASLVIVFINMIG  216
            KQMSID+D+RAG ID+ +A++ RE + KES+LFGAMDGAMKFVKGDAIA++++++IN+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  217  GFAIGVLQNGMAAGDAMHIYSVLTIGDGLIAQIPALLISLTAGMIITRVSADGQKMDNNI  276
            G++IGV+Q+ M+A +AM+ Y+VL+IGDGL AQIP+LLIS+TAG+I+TRV++  +   +++
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNK---QSL  271

Query  277  GREIAEQLTSQPKA-WIISSVGMLGFALLPGMPTlvfllislvslgsglfQLWRVKQSGL  335
            + E+A Q+  QP A W+ +++ +  FALLPG P L+F+ ++    +++++  ++ ++ + 
Sbjct  272  ANELAVQVGRQPDALWLAAAI-LTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQ  330

Query  336  QDSLLADDGMPAEQNGYQDLRRFNPTRAYLLQFHTVWQGAAAAAVLVQDIRRLRNRLVYH  395
            ++   A++G  +E+ G  + R    + + +L+      +    + L +DI  LR R   H
Sbjct  331  DGR--ANGG--SEEGGATGQRMTPGAVPLMLHC----ASNLHHPHLGRDIDGLRWRWFEH  382

Query  396  FGFTLPSFDIEFNPSVPEDEFRFCVYEIPQLRASFGVPLLAVPRGQLPEAMQDDAMMPGL  455
            +G  LP  +I  +P+++E+ +   VY+   L   +    L + R   +   +++ + + +
Sbjct  383  LGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAKM  442

Query  456  SARDEHHLLWLTPEHPLLQQPELSPW-SPDALILSRMENAIHRSGAQFIGLQETKSIlaw  514
            ++ D     WL + +++  +    P    +  I++ +   ++R  A+FIG+QET+ ++  
Sbjct  443  GSFD-----WLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDA  497

Query  515  leaeqpelaqelqRIMPLSRFASVLQRLASERVPLRSVRPIAEALIEIGQHERDINALTD  574
            +E+   EL +ELQR +P+++ A +LQRL  E +++R +R I  AL+  +  E+DI  LT+
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  575  YVRLELKAQICHQYSQDDS-LTVWLLTPETEELLRDALRQTQNETFFALTQEYAATLLGL  633
            YVR+ L+ ++C+++S++ + ++V  L    E+L+RD++RQT + T+ AL +  +  +L  
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  634  LRRAFPPMTPPSALILVAQDLRSPLRILLQDEFHHVPVLSFTELESHLSINVAGRIDLLD  693
            ++ AF+      A++L + D+R  +R +++ ++  +PVLS  EL  +++++VAG I+L++
Sbjct  618  IKNAFA--ENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIG  675

222) E11023_00470 in NC_017431


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  341 bits (1279),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 288/694 (42%), Positives = 480/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKILPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   + P+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

223) E150_00475 in NC_017439


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  341 bits (1279),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 288/694 (42%), Positives = 480/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKILPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   + P+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

224) BOUR_00092 in NC_020971


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  341 bits (1279),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 288/694 (42%), Positives = 480/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKILPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   + P+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

225) SOTONE8_00092 in NC_020942


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  341 bits (1279),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 288/694 (42%), Positives = 480/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKILPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   + P+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

226) lcrD in NC_017952


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  341 bits (1279),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 288/694 (42%), Positives = 480/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKILPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   + P+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

227) lcrD in NC_020511


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  341 bits (1279),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 288/694 (42%), Positives = 480/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKILPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   + P+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

228) lcrD in NC_020512


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  341 bits (1279),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 288/694 (42%), Positives = 480/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKILPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   + P+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

229) lcrD in NC_017441


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  341 bits (1279),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 288/694 (42%), Positives = 480/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKILPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   + P+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

230) SOTONE4_00092 in NC_020969


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  341 bits (1279),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 288/694 (42%), Positives = 480/694 (70%), Gaps = 32/694 (4%)

Query  17   ALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQL  76
            +L MI    D++LA+ +L  V+M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+ IGV    M+  +A + Y++++IGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFA  316
            SLLIS+TAGI+ TRV++ +  +L++E++ Q+ ++P AL L+A+    ++++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  LMAVLFAVLGILLITKKNSPgkkggasstttvgaadgaaasgENSDDYALTLPVILELGK  376
             +A   A  ++LL  K+   ++ G A++ +  G+A G   +         ++P++L+ + 
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPG-------AVPLMLHCAS  361

Query  377  DLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEV  436
            +L     ++   G+      I  +R   ++++G+  P +++R D P+L  N   + + + 
Sbjct  362  NL-----HHPHLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQE  410

Query  437  PYVRGKILPNHVLTNEVEENLSRYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKY  493
              +   + P+ +L       L+R   +++T ++  +A + S  W+ +         +I Y
Sbjct  411  RVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPY  463

Query  494  WSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFK  553
                + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++
Sbjct  464  VEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQ  523

Query  554  RLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLL  613
            RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L
Sbjct  524  RLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRL  583

Query  614  DPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRY  673
            +  +E++IR++I+QTS+G+Y AL+     LIL+ ++ ++    +  Q +VLLT++DVRR+
Sbjct  584  GDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRF  639

Query  674  VRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQI  707
            VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  640  VRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

231) BN356_4551 in NC_019391


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  340 bits (1278),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 289/695 (42%), Positives = 477/695 (69%), Gaps = 33/695 (4%)

Query  17   ALNMINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQL  76
            +L MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFS  316
            SLLIS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  ILSLIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELG  376
             L+   +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ +
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCA  360

Query  377  KDLSKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNE  436
             +L           ++ ++  I  +R   ++++G+  P +++R D P+L      + + +
Sbjct  361  SNLH----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQ  409

Query  437  VPYVRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIK  493
               +   +P++ +L       L R   +++T ++  G   +   W+           +I 
Sbjct  410  ERVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIP  462

Query  494  YWTPLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIF  553
            Y    + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI+
Sbjct  463  YVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEIL  522

Query  554  KRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYL  613
            +RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  
Sbjct  523  QRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLR  582

Query  614  LDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRR  673
            L+  +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR
Sbjct  583  LGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRR  638

Query  674  YVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQI  708
            +VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

232) G5O_0495 in NC_017287


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  340 bits (1278),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 289/695 (42%), Positives = 477/695 (69%), Gaps = 33/695 (4%)

Query  17   ALNMINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQL  76
            +L MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFS  316
            SLLIS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  ILSLIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELG  376
             L+   +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ +
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCA  360

Query  377  KDLSKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNE  436
             +L           ++ ++  I  +R   ++++G+  P +++R D P+L      + + +
Sbjct  361  SNLH----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQ  409

Query  437  VPYVRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIK  493
               +   +P++ +L       L R   +++T ++  G   +   W+           +I 
Sbjct  410  ERVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIP  462

Query  494  YWTPLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIF  553
            Y    + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI+
Sbjct  463  YVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEIL  522

Query  554  KRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYL  613
            +RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  
Sbjct  523  QRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLR  582

Query  614  LDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRR  673
            L+  +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR
Sbjct  583  LGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRR  638

Query  674  YVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQI  708
            +VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

233) B711_0534 in NC_018625


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  340 bits (1278),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 289/695 (42%), Positives = 477/695 (69%), Gaps = 33/695 (4%)

Query  17   ALNMINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQL  76
            +L MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFS  316
            SLLIS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  ILSLIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELG  376
             L+   +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ +
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCA  360

Query  377  KDLSKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNE  436
             +L           ++ ++  I  +R   ++++G+  P +++R D P+L      + + +
Sbjct  361  SNLH----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQ  409

Query  437  VPYVRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIK  493
               +   +P++ +L       L R   +++T ++  G   +   W+           +I 
Sbjct  410  ERVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIP  462

Query  494  YWTPLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIF  553
            Y    + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI+
Sbjct  463  YVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEIL  522

Query  554  KRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYL  613
            +RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  
Sbjct  523  QRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLR  582

Query  614  LDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRR  673
            L+  +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR
Sbjct  583  LGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRR  638

Query  674  YVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQI  708
            +VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

234) AO9_02410 in NC_020248


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  340 bits (1278),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 289/695 (42%), Positives = 477/695 (69%), Gaps = 33/695 (4%)

Query  17   ALNMINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQL  76
            +L MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFS  316
            SLLIS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  ILSLIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELG  376
             L+   +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ +
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCA  360

Query  377  KDLSKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNE  436
             +L           ++ ++  I  +R   ++++G+  P +++R D P+L      + + +
Sbjct  361  SNLH----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQ  409

Query  437  VPYVRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIK  493
               +   +P++ +L       L R   +++T ++  G   +   W+           +I 
Sbjct  410  ERVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIP  462

Query  494  YWTPLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIF  553
            Y    + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI+
Sbjct  463  YVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEIL  522

Query  554  KRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYL  613
            +RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  
Sbjct  523  QRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLR  582

Query  614  LDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRR  673
            L+  +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR
Sbjct  583  LGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRR  638

Query  674  YVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQI  708
            +VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

235) Cpsi_4511 in NC_014796


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  340 bits (1278),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 289/695 (42%), Positives = 477/695 (69%), Gaps = 33/695 (4%)

Query  17   ALNMINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQL  76
            +L MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++
Sbjct  9    GLTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEF  68

Query  77   SVFPSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitii  136
            SVFPSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++
Sbjct  69   SVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVV  128

Query  137  qfivvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYG  196
            QFIV+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+G
Sbjct  129  QFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFG  188

Query  197  AMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIP  256
            AMDGAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIP
Sbjct  189  AMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIP  248

Query  257  SLLISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFS  316
            SLLIS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F 
Sbjct  249  SLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFI  308

Query  317  ILSLIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELG  376
             L+   +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ +
Sbjct  309  TLAAAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCA  360

Query  377  KDLSKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNE  436
             +L           ++ ++  I  +R   ++++G+  P +++R D P+L      + + +
Sbjct  361  SNLH----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQ  409

Query  437  VPYVRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIK  493
               +   +P++ +L       L R   +++T ++  G   +   W+           +I 
Sbjct  410  ERVLEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIP  462

Query  494  YWTPLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIF  553
            Y    + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI+
Sbjct  463  YVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEIL  522

Query  554  KRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYL  613
            +RLV+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  
Sbjct  523  QRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLR  582

Query  614  LDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRR  673
            L+  +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR
Sbjct  583  LGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRR  638

Query  674  YVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQI  708
            +VRK+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

236) A464_2920 in NC_021870


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  340 bits (1277),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 271/661 (41%), Positives = 462/661 (70%), Gaps = 30/661 (4%)

Query  31   PLPTFLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSTALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMMQLLNNPFVL-VVTAILTISMGTLPGFPLPVFVILSVVLGVLFYFKFREAKRSAGAPK  328
            + +Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGTSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG + G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVTFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +VT   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTTHQQGSSQYFWVTYEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
                    + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDIIRKGIRQTSGSTFLSLEPDASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +LE   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

237) invA in NC_015761


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  339 bits (1272),  Expect = 4e-94, Method: Compositional matrix adjust.
 Identities = 270/661 (41%), Positives = 461/661 (70%), Gaps = 30/661 (4%)

Query  31   PLPTFLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSTALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMMQLLNNPFVL-VVTAILTISMGTLPGFPLPVFVILSVVLGVLFYFKFREAKRSAGAPK  328
            + +Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGTSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG + G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVTFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +VT   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTTHQQGSSQYFWVTYEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
                    + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEAEDIIRKGIRQTSGSTFLSLEPDASANl  624
            L E +R A+ R +C++F++     +V+ ++   E++IR +IRQTS++T+ +LE   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

238) B598_0505 in NC_018620


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

239) B602_0501 in NC_018623


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

240) B599_0498 in NC_018627


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

241) B600_0534 in NC_018621


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

242) B603_0509 in NC_018624


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

243) B601_0505 in NC_018622


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

244) CPS0A_0505 in NC_017289


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

245) CPS0B_0502 in NC_017292


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

246) CPS0D_0504 in NC_017290


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

247) CPSIT_0498 in NC_015470


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

248) CPS0C_0507 in NC_017291


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

249) B712_0503 in NC_018626


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  338 bits (1270),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 288/692 (42%), Positives = 475/692 (69%), Gaps = 33/692 (4%)

Query  1    MINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVF  60
            MI    D++LA+ ++  V+M+ILPLP T+VDL+I+INLA SV+LLM+++Y+  +L++SVF
Sbjct  12   MITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVF  71

Query  61   PSLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfi  120
            PSLLLITT++RL++ IS++R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFI
Sbjct  72   PSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFI  131

Query  121  vvTKGaervaevaarFRLDAMPGKQMAIDADLRAGMIDAQQARDKRSMIQKESELYGAMD  180
            V+TKG+ERVAEV+ARF LD+MPGKQM+ID+D+RAG ID+ +A+  R  +QKES L+GAMD
Sbjct  132  VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMD  191

Query  181  GAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLL  240
            GAMKF+KGD IAGI++ LINI+GG+TIGV  H M   +A + Y++LSIGDGL +QIPSLL
Sbjct  192  GAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLL  251

Query  241  ISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILS  300
            IS+TAGI+ TRV++ ++ +L++E++ Q+ ++P AL LA+A     +++ GFP+  F  L+
Sbjct  252  ISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLA  311

Query  301  LIFGILGVILLAKKNSASKQgasgasttvgaasdgaaaagdNPDDYSLTLPVILELGKDL  360
               +  + +L  K+   S++    + +  G+  +GA++    P+    ++P++L+ + +L
Sbjct  312  AAVAAPAFLLYRKNRRISQD----GRANGGSEEGGATGQRMTPG----AVPLMLHCASNL  363

Query  361  SKLIQQKTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPY  420
                       ++ ++  I  +R   ++++G+  P +++R D P+L      + + +   
Sbjct  364  H----------HPHLGRDIDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERV  412

Query  421  VRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSA---WVSEDAKAILEKAAIKYWT  477
            +   +P++ +L       L R   +++T ++  G   +   W+           +I Y  
Sbjct  413  LEVVLPPDSLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVE  465

Query  478  PLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRL  537
              + II  L+  F+R + EF+G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RL
Sbjct  466  GHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRL  525

Query  538  VQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDP  597
            V+E+ISI+DLRTI+ +L  WA  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+ 
Sbjct  526  VEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGD  585

Query  598  EIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRNTItptppggqppVLLTAIDVRRYVR  657
             +E++IR++I+QTS+G+Y AL+     LIL+ ++N++    +  Q +VLLT++DVRR+VR
Sbjct  586  GVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVR  641

Query  658  KLIETEFPDIAVISYQEILPEIRIQPLGRIQI  689
            K+IE ++  ++V+S QE+  E+ ++  G I++
Sbjct  642  KIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

250) CTL2C_683 in NC_015744


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  337 bits (1264),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 281/672 (42%), Positives = 467/672 (70%), Gaps = 32/672 (4%)

Query  1    MIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQLSVFPSLLLITTMFRLGINISSS  60
            M+ILPLP +MVD++I+INLA+SV+LLM+++Y+  +L++SVFPSLLLITT++RL++ IS++
Sbjct  31   MMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTT  90

Query  61   RQILLHAYAGHVIQAFGDFVVGGNYvvgfiifliitiiqfivvTKGaervaevaarFRLD  120
            R +LL+  AG++++AFG+FVVGGN  VG IIF IIT++QFIV+TKG+ERVAEV+ARF LD
Sbjct  91   RLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLD  150

Query  121  AMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYGAMDGAMKFIKGDVIAGIVISLI  180
            +MPGKQM+ID+D+RAG ID+ +A+  R ++QKES L+GAMDGAMKF+KGD IAGI++ LI
Sbjct  151  GMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILI  210

Query  181  NIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIPSLLISLTAGIVTTRVSSDKDTN  240
            NI+GG+ IGV    M+  +A + Y++++IGDGL +QIPSLLIS+TAGI+ TRV++ +  +
Sbjct  211  NIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQS  270

Query  241  LGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFALMAVLFAVLGILLITKKNSPgk  300
            L++E++ Q+ ++P AL L+A+    ++++ GFP+  F  +A   A  ++LL  K+   ++
Sbjct  271  LANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQ  330

Query  301  kggasstttvgaadgaaasgENSDDYALTLPVILELGKDLSKLIQQRTKSGQSFVDDMIP  360
             G A++ +  G+A G   +         ++P++L+ + +L     ++   G+      I 
Sbjct  331  DGRANGGSEEGGATGQRMTPG-------AVPLMLHCASNL-----HHPHLGRD-----ID  373

Query  361  KMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEVPYVRGKIPPNHVLTNEVEENLS  420
             +R   ++++G+  P +++R D P+L  N   + + +   +   +PP+ +L       L+
Sbjct  374  GLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERVLEVVLPPDSLL-------LT  425

Query  421  RYNLPFITYKN--AAGLPS-TWVSTDALTILEKAAIKYWSPLEVIILHLSYFFHRNSQEF  477
            R   +++T ++  +A + S  W+ +         +I Y    + II  L+  F+R + EF
Sbjct  426  RPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEF  485

Query  478  LGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRLVQEQISIKDLRTILESLSEW  537
            +G+QE R +++ ME  + +LVKE+ R IP+ K++EI++RLV+E+ISI+DLRTI+ +L  W
Sbjct  486  IGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVW  545

Query  538  AQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLA  597
            A  EKD V+LTEYVR +L+  +  +FS+ ++ ISV  L+  +E++IR++I+QTS+G+Y A
Sbjct  546  APKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSA  605

Query  598  LDPDSVNLILKSMRMTItptppggqppVLLTAIDVRRYVRKLIETEFPDIAVISYQEVLP  657
            L+     LIL+ ++ ++    +  Q +VLLT++DVRR+VRK+IE ++  ++V+S QE+  
Sbjct  606  LEERQSLLILNKIKNAF----AENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGD  661

Query  658  EIRIQPLGRIQI  669
            E+ ++  G I++
Sbjct  662  EMNLKVAGTIEL  673

251) sctV in NC_005861


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  336 bits (1262),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 291/684 (43%), Positives = 477/684 (70%), Gaps = 47/684 (6%)

Query  45   FPVNPHVIDYLIAINLSSSIALLMVALYIPSAVHLSIFPSlllittlyrlglNIASTRQI  104
            +P+   ++D LIAINL+ S+ LLM+++Y+  ++++S+FPSLLLITTLYRL+L I++TR +
Sbjct  34   LPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLV  93

Query  105  LLHANAGEiifqfgnfvvggnfvvggvifliiTLVQFLVITKGAERVAEVAARFTLDAMP  164
            LL+ +AGEI+  FG+FVVGGN+ VG +IF IIT+VQF+VITKG+ERVAEV+ARF+LD+MP
Sbjct  94   LLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMP  153

Query  165  GKQMSIDADMRAGILDSNQAREKRLAIQRESQLYGAMDGAMKFVKGDAIAGIVITLINVI  224
            GKQMSID+DMRAG +DS +A+  R  +Q+ES+L+GAMDGAMKFVKGDAIAGI++ LIN+I
Sbjct  154  GKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINII  213

Query  225  GGMIIGMTMNEMEASDAAKTYALLSIGDGLISQIPALLISITAGIVTTRVSGSEKVENLG  284
            GG+ IG+  + M A +A +TYA+LSIGDGL +QIP+LLISITAGI+ TRV+GS+K ++L+
Sbjct  214  GGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNK-QSLA  272

Query  285  TEISGQILKQPKALMITAAFLMGMSLVPGFPMPPFliaaaalgligyalWSNEQKALLgg  344
             E++ Q+ +QP AL ++AA+L   +L+PGFP   F+  AAA++  ++ L  ++++     
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRR-----  327

Query  345  gsvgsmgggTIQSAAGSDSSVETSVRGHKVISGGGVDSYALTLPVVLEVGRGLSIEIQKA  404
                       Q + ++++S E +  G+++ +G        ++P++L+ +  L    + +
Sbjct  328  ---------ISQDGRANGGSEEGGATGQRMTPG--------AVPLMLHCASNL----HHP  366

Query  405  NKGTSFIDQMIPKMRQALYADLGVRFPGVHVRTDSPILDKDEYSIHLNEVPIVRGKVLEN  464
            + G       I  +R   + +LGV +P V++R D P L  +  S+++ +  ++   +  +
Sbjct  367  HLGRD-----IDGLRWRWFEHLGVPLPEVEIRCD-PTLAENTLSVQVYQERVLEVVLPPD  420

Query  465  HLLTNESEENLKRYNLPFVSYKNSLG--LPSL-WVDAKNKELLDKAGIRYWSSLEVMILH  521
             LL       L R   ++V+ ++ LG  + S+ W+DAK+       GI Y  + + +I  
Sbjct  421  SLL-------LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITC  473

Query  522  LSYFFRHYANEFVGIQEVKSMLEFVEKSFPDLVKEVTRLIPLQKMTDIFKRLIQEQISIK  581
            L+  F +Y+ EF+G+QE + +++ +E  + +LVKE+ R IP+ K+++I++RL++E+ISI+
Sbjct  474  LTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIR  533

Query  582  DLRTILEALGEWAQTEKDTVLLTEYVRSSLKRFISYKYSQGQSVLSVYILDPEIEDMVRG  641
            DLRTI+ AL  WA  EKD V+LTEYVR +L+R +  ++S+ ++ +SV  L+  +E+++R+
Sbjct  534  DLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRD  593

Query  642  AIKQTSAGSYLALDPDSVQLILQGVRNTVSppppggqppVILTAIDVRRFVRKLIEMEFT  701
            +I+QTS+G+Y AL+     LIL+ ++N+ +      Q +V+LT++DVRRFVRK+IE ++ 
Sbjct  594  SIRQTSSGTYSALEERQSLLILNKIKNAFA----ENQDAVLLTTLDVRRFVRKIIERDLF  649

Query  702  DISVVSYQEIVPEIRIQPLGRIQI  725
             ++V+S QE+  E+ ++  G I++
Sbjct  650  VLPVLSWQELGDEMNLKVAGTIEL  673

252) sctV in NC_015713


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  335 bits (1259),  Expect = 5e-93, Method: Compositional matrix adjust.
 Identities = 270/662 (41%), Positives = 467/662 (71%), Gaps = 35/662 (5%)

Query  49   FIAFNMSLSISLLMVALYIQKAVHLSIFPSVLLITTLFRLGIEIAATRQILLKADAGEII  108
            +IA+N+++S+ LLM+++Y++ ++++S+FPS+LLITTL+RL++ I++TR +LL+ DAGEI+
Sbjct  44   LIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIV  103

Query  109  QAfgefvvggnfivggvifliitivQFIVVTKGAERVAEVAARFTLDAMPGKQMSIDADM  168
            +AFG+FVVGGN+ VG +IF IIT+VQFIV+TKG+ERVAEV+ARF+LD+MPGKQMSID+DM
Sbjct  104  EAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDM  163

Query  169  RSGTIDANQARELRLALQKESQLYGAMDGALKFVKGDviagiviavinivggliignMIH  228
            R+G+ID+ +A+ LR  +QKES+L+GAMDGA+KFVKGD IAGI++ +INI+GG+ IG M H
Sbjct  164  RAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQH  223

Query  229  GMTMLQSAQVYTLLSIGEGLVTQIPSLMISLTAGIVTTRVSSEKKGGNLGKDITSQIFSH  288
             M+  ++ + Y++LSIG+GL +QIPSL+IS+TAGI+ TRV++ +K + L+++++ Q+  +
Sbjct  224  KMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQS-LANELAVQVGRQ  282

Query  289  SKGLILAGIVTLGMAFLKGFPSFLFLAVCAVLMSVGITNWvkekkkakkavagalgaaQV  348
            + +L LA+ +    A+L GFP ++F+++ A + + ++   +  +K+ + +  G   ++  
Sbjct  283  PDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAF---LLYRKNRRISQDGRANGGSE  339

Query  349  ETDVEGHTVVRGGLDDYALTLPVILETGKDLSSIIRKEKGGTAFVEEMIPKMRHALYQDL  408
            E +  G+ +  G       ++P++L+ + +L           + +   I  +R   +++L
Sbjct  340  EGGATGQRMTPG-------AVPLMLHCASNLHH---------PHLGRDIDGLRWRWFEHL  383

Query  409  GIRFPGVHVRTESPSLDANEYSIYLNEVPLVRGKILSGSVLTNETEETLRRYNLPFTSSK  468
            G+ +P V++R + P+L  N  S     V + + ++L   VL  ++    R  + ++ +++
Sbjct  384  GVPLPEVEIRCD-PTLAENTLS-----VQVYQERVLE-VVLPPDSLLLTRPCS-SLVTNN  435

Query  469  NVVGQ--ASL-WVENKYVEVLKKAGIKYWEPLDVMILHLSQFYKQYAAEFIGIQEVRAIL  525
            +V+G   +S+ W++ K     +  GI Y E  + +I  L++ + +Y+AEFIG+QE R ++
Sbjct  436  QVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLM  495

Query  526  EFVEKSFPDLIKEVTRLVPLQKLTEIFKRLVQEQVSVKDLRTILEALSEWAQTEKDTVLL  585
            + +E  + +L+KE+ R +P+ K++EI++RLV+E++S++DLRTI+ AL  WA  EKD V+L
Sbjct  496  DAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVML  555

Query  586  TEYVRSSLKRYISYKYSLGQTVLSVYLLDPEIEDMVRGAIKQTSAGSYLALDPDSVQLIL  645
            TEYVR +L+R +  ++S  +T +SV  L+  +E+++R++I+QTS+G+Y AL+     LIL
Sbjct  556  TEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLIL  615

Query  646  HAMRGVIAPTPPGGQPPVLLTAIDVRRFVRKLIEGEFPDLPTVSYQEIVPEIRIQPLGRI  705
            + ++  +A      Q +VLLT++DVRRFVRK+IE ++  LP +S QE+  E+ ++  G I
Sbjct  616  NKIKNAFA----ENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI  671

Query  706  QL  707
            +L
Sbjct  672  EL  673

253) BTI_4104 in NC_021174


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  331 bits (1243),  Expect = 9e-92, Method: Compositional matrix adjust.
 Identities = 282/684 (42%), Positives = 468/684 (69%), Gaps = 40/684 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGINIAISVTLLMVTMYVGSIVSLSVFPSVLLF  72
            ++ ++V+++  V +MILPLP  ++D+L++IN+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITTVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGEAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A EA N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDEGEGTSLGSEIARQLGGSHRalyfaavlllgfaavPGFPAALFVLLSAT  312
            +++TRV++ + ++ +  L+ +++RQ ++      +AA +L  FA +PGFP  +F+ L+A+
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQPDALW----LAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  LAFAGYRLQKGARRSTARGEPVIALQRAGAKSG--TPSILPRAPLFTCAIGVRVSPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSGALPAATCEILMRDVPQAR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+  T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAESY-WIDDKaapagarawraEQVIAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K  +  AR+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAK-QAMQARTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAYLFLGIQETQWILDQLGLDYPGLVAEVQKALPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QET+ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSV-ASFVGDAPRDDVALVTSMDVRRYTRRMIEARLG  660
            +SI+QT++G + AL   Q   +++ +  +F  +   +D  L+T++DVRR+ R++IE  L 
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN---QDAVLLTTLDVRRFVRKIIERDLF  649

Query  661  WLPVYSYQELGDQVELRPVGRVTM  684
             LPV S QELGD+++L+  G + +
Sbjct  650  VLPVLSWQELGDEMNLKVAGTIEL  673

254) sctV in NC_014225


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  330 bits (1239),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 276/660 (42%), Positives = 450/660 (69%), Gaps = 50/660 (7%)

Query  72   YIPSAVHLSIFPSLLLITTLYRLGTNIASTRQILLNANAGEiifsfgnfvvggnfvvggi  131
            Y+  ++++S+FPSLLLITTLYRL+  I++TR +LL+ +AGEI+ +FG+FVVGGN+ VG I
Sbjct  61   YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMI  120

Query  132  ifiiitlvnfiviTKGAERVAEVAARFTLDAMPGKQMSIDADMRAGILDSNEARAKRLAI  191
            IF IIT+V+FIVITKG+ERVAEV+ARF+LD+MPGKQMSID+DMRAG +DS EA+  R  +
Sbjct  121  IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERV  180

Query  192  QKESQLYGAMDGAMKFVKGDAIAGIVITLINVIGGMTIGMAINGMPAQDAISTYAILSIG  251
            QKES+L+GAMDGAMKFVKGDAIAGI++ LIN+IGG+TIG+  + M+A++A++TYA+LSIG
Sbjct  181  QKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIG  240

Query  252  DGLVSQIPALLISITAGIVTTRVSSEKEANLGKEISGQLLKQPKALMIAAGFCMGLAILP  311
            DGL +QIP+LLISITAGI+ TRV++ +  +L++E++ Q+ +QP AL +AA++   +A+LP
Sbjct  241  DGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLP  300

Query  312  GFPKAPFMILALTFGIMGYALWsgeagraaggssggggggamaggissaaeeessTIETA  371
            GFP   F+ LA + +  ++ L                                +  I   
Sbjct  301  GFPFLIFITLAAAVAAPAFLL-----------------------------YRKNRRISQD  331

Query  372  VKGHSAITGGGVDSYSLT---LPVILECGNSLSSKIQKAQRGKSFIDVMIPRMRQALYAD  428
             +++++   GG  +  +T   +P++L+C+++L    + ++ G+      I  +R   + +
Sbjct  332  GRANGGSEEGGATGQRMTPGAVPLMLHCASNL----HHPHLGRD-----IDGLRWRWFEH  382

Query  429  LGVRFPGVHVRTDSPILEPDEYSIHLNEVPIIRGKVLAGHVLTNETEENLNRYNLSFTAY  488
            LGV +P V++R D P L  +  S+++ +  ++   + ++ +L      +L   N  + A 
Sbjct  383  LGVPLPEVEIRCD-PTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAK  441

Query  489  KNSLGMPSLWVEDKNKQILEKAGIKSWDSLEVMILHLSYFFRHYANEFVGIQEAKSMLEF  548
              S++    W++ K+       GI   ++ + +I  L+  F +Y+ EF+G+QE++ +++ 
Sbjct  442  MGSFD----WLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDA  497

Query  549  MEKSFPDLVKEVTRLIPLQKMTDIFKRLIQEQISVKDLRTILESLSEWAQTEKDTVLLTE  608
            ME  + +LVKE+ R IP+ K+++I++RL++E+IS++DLRTI+ +L  WA  EKD V+LTE
Sbjct  498  MEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTE  557

Query  609  YVRSSLKRYISYKFSQGQSVLSVYILDPEIEDMVRGAIKQTSAGSYLALDPDSVQLILQG  668
            YVR +L+R +  +FS+ ++ +SV  L+  +E+++R++I+QTS+G+Y AL+     LIL+ 
Sbjct  558  YVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNK  617

Query  669  IRNTVAPPPPGGQEPVLLTAIDVRRFVRKLIEMEFPDVSVVSYQEIVPEIRIQPLGRIQL  728
            I+N+ A      Q++VLLT++DVRRFVRK+IE ++  ++V+S QE+  E+ ++  G I+L
Sbjct  618  IKNAFA----ENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

255) SBOV29221 in NC_022241


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  322 bits (1209),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 270/671 (41%), Positives = 470/671 (71%), Gaps = 30/671 (4%)

Query  1    MVMIISMFVIPLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLA  60
            +++ + M ++PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLA
Sbjct  25   LLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLA  84

Query  61   LSISTSRLILIEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVA  120
            L+IST+RL+L++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+
Sbjct  85   LTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVS  144

Query  121  ARFSLDGMPGKQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiag  180
            ARFSLDGMPGKQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAG
Sbjct  145  ARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAG  204

Query  181  iiiifvnfiggisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVN  240
            II+I++N+IGGI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV 
Sbjct  205  IIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVP  264

Query  241  G-DSDNMGRNIMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfR  298
            G + ++++ ++  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R
Sbjct  265  GSNKQSLANELAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYR  323

Query  299  EAKRSAAKPKTSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQ  358
              +R +   +++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++
Sbjct  324  KNRRISQDGRANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPH  367

Query  359  LA---ERLRSQFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNY  415
            L+   + LR + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +   
Sbjct  368  LGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRP  427

Query  416  SDEVVSFGINPTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNE  475
               +V+   N  +     + + W+   ++ + R LG    ++ + +  CL+  + R   E
Sbjct  428  CSSLVT---NNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAE  484

Query  476  YFGIQETKHMLDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALAL  535
            ++G+QET+ ++D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +
Sbjct  485  FIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVV  544

Query  536  WAPREKDVINLVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFL  594
            WAP+EKD++ L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ 
Sbjct  545  WAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYS  604

Query  595  SLDPEASANlmdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIA  654
            +L+   S     LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++
Sbjct  605  ALEERQS----LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  655  DSKSVNVIKTI  665
            D  +++V  TI
Sbjct  661  DEMNLKVAGTI  671

256) SARI_00077 in NC_010067


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  321 bits (1203),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 272/671 (41%), Positives = 468/671 (70%), Gaps = 30/671 (4%)

Query  1    MVMIISMFVIPLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLA  60
            +++ + M ++PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLA
Sbjct  25   LLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLA  84

Query  61   LSISTSRLILIEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVA  120
            L+IST+RL+L++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+
Sbjct  85   LTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVS  144

Query  121  ARFSLDGMPGKQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiag  180
            ARFSLDGMPGKQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAG
Sbjct  145  ARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAG  204

Query  181  iiiifvnfiggisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVN  240
            II+I++N+IGGI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV 
Sbjct  205  IIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVP  264

Query  241  G-DSDNMGRNIMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfR  298
            G + ++++ ++  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R
Sbjct  265  GSNKQSLANELAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYR  323

Query  299  EAKRSAGTPKTSKGEQPLSIEEKEGTSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQ  358
              +R +   +++ G +       EG + G     ++++  +VPL+L  +     +L+ ++
Sbjct  324  KNRRISQDGRANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPH  367

Query  359  LA---DRLRSQFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNY  415
            L+   D LR + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +   
Sbjct  368  LGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRP  427

Query  416  SDEVVSFGINPTTHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNE  475
               +V+   N        + + W+   ++ + R LG    ++ + +  CL+  + R   E
Sbjct  428  CSSLVT---NNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAE  484

Query  476  YFGIQETKHMLDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALAL  535
            ++G+QET+ ++D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +
Sbjct  485  FIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVV  544

Query  536  WAPREKDVINLVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFL  594
            WAP+EKD++ L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ 
Sbjct  545  WAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYS  604

Query  595  SLEPEASANlmdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIA  654
            +LE   S     LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++
Sbjct  605  ALEERQS----LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

Query  655  DSKSVNVIKTI  665
            D  +++V  TI
Sbjct  661  DEMNLKVAGTI  671

257) SE451236_20575 in NC_021820


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

258) SeAg_B3018 in NC_011149


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

259) SEEB0189_05690 in NC_021844


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

260) invA in NC_006905


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

261) CFSAN002050_20780 in NC_021818


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

262) invA in NC_011294


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

263) invA in NC_011274


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGASLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

264) invA in NC_022221


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

265) invA in NC_016831


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

266) SEEH1578_23290 in NC_021810


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIYQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

267) SU5_03377 in NC_017623


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIYQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

268) CFSAN002069_17790 in NC_021812


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIYQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

269) SeHA_C3086 in NC_011083


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIYQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

270) SNSL254_A3101 in NC_011080


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIYQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

271) SN31241_39880 in NC_021902


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIYQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

272) SSPA2568 in NC_011147


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

273) invA in NC_006511


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

274) SPAB_03599 in NC_010102


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

275) invA in NC_012125


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

276) I137_13790 in NC_021984


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

277) SeSA_A3049 in NC_011094


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

278) invA in NC_003198


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

279) invA in NC_016856


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

280) invA in NC_017046


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

281) STMMW_28581 in NC_016854


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

282) invA in NC_003197


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

283) invA in NC_016810


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

284) inva in NC_016857


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

285) STMDT12_C29450 in NC_016860


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

286) STU288_14635 in NC_021151


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

287) invA in NC_016863


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

288) CFSAN001921_02595 in NC_021814


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

289) STBHUCCB_29420 in NC_016832


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

290) TY21A_14135 in NC_021176


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

291) invA in NC_004631


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1196),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

292) SeD_A3206 in NC_011205


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  319 bits (1195),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 269/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMARHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E+LQRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

293) CFSAN001992_19045 in NC_020307


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  317 bits (1190),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 268/661 (41%), Positives = 463/661 (71%), Gaps = 30/661 (4%)

Query  31   PLPTYLVDFlialnivlailvFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLIL  90
            PLPT +VD+LIA+N+ ++++++M S+Y+   L FS FP++LLITTL+RLAL+IST+RL+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  91   IEADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPG  150
            ++ DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  151  KQMSIDADLKAGIIDADAARERRSVLERESQLYGSFDGAMKFikgdaiagiiiifvnfig  210
            KQMSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IG
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  211  gisvgMTRHGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRN  269
            GI++G+ +H M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ +
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANE  274

Query  270  IMTQLLNNPFVL-VVTAILTISMGTLPGfplpvfvilsvvlsvlfyfkfREAKRSAAKPK  328
            +  Q+  +P  L + +AILT+  + LPGFP+ +F+ L+  ++   ++ +R  +R +   +
Sbjct  275  LAVQVGRQPDALWLAAAILTV-FALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGR  333

Query  329  TSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLA---ERLRS  385
            ++ G +       EG++ G     ++++  +VPL+L  +     +L+ ++L+   + LR 
Sbjct  334  ANGGSE-------EGGATG-----QRMTPGAVPLMLHCA----SNLHHPHLGRDIDGLRW  377

Query  386  QFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGIN  445
            + F + GV LPEV +R +  L +N++ + + + RV +  +  D + +      +V+   N
Sbjct  378  RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVT---N  434

Query  446  PTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHM  505
              +     + + W+   ++ + R LG    ++ + +  CL+  + R   E++G+QET+ +
Sbjct  435  NQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYL  494

Query  506  LDQLEAKFPDLLKEVLRHATVQRISEVVQRLLSERVSVRNMKLIMEALALWAPREKDVIN  565
            +D +E+++ +L+KE+ R+  V +++E++QRL+ E +S+R+++ I  AL +WAP+EKD++ 
Sbjct  495  MDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVM  554

Query  566  LVEHIRGAMARYICHKFANGGELRAVM-VSAEVEDVIRKGIRQTSGSTFLSLDPEASANl  624
            L E +R A+ R +C++F++     +V+ ++  VE++IR +IRQTS++T+ +L+   S   
Sbjct  555  LTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS---  611

Query  625  mdlitlklddllIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKT  684
              LI  K+ + +  ++D VLLT++DVRRF++K+IE  +  L VLS  E++D  +++V  T
Sbjct  612  -LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGT  670

Query  685  I  685
            I
Sbjct  671  I  671

294) BTH_II0751 in NC_007650


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  315 bits (1180),  Expect = 8e-87, Method: Compositional matrix adjust.
 Identities = 282/684 (42%), Positives = 469/684 (69%), Gaps = 40/684 (5%)

Query  13   EVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSVLLF  72
            ++ ++V+++  V +MILPLP  ++D+L+++N+A+SV LLM+++Y+   + +SVFPS+LL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  73   TTLYRLSLNIASTKSILLHANAGDIIESFgelvvggnlvvglvvflIITTVQFIVIAKGS  132
            TTLYRL+L I++T+ +LL+ +AG+I+E+FG++VVGGNL VG+++F IIT VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  133  ERVAEVGARFTLDAMPGKQMSIDADLRANILTPDEARRKRATLAKESQLHGGMDGAMKFV  192
            ERVAEV+ARF+LD+MPGKQMSID+D+RA  + + EA+R R  + KES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  193  KGDAIAGLIITLVNIVAGIAIGVMYHGMTAGEAANRFSILSVGDAMVSQIPSLLISVAAG  252
            KGDAIAG+I+ L+NI++GI+IGVM H M+A EA N +++LS+GD++ +QIPSLLIS++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  253  VMITRVADDHDEGEGASLGSEIARQLGGSHRalyfaavlllgfaavpgfpaalfallsat  312
            +++TRV++ + ++ +  L+ +++RQ ++      +AA +L  FA +PGFP  +F  L+A+
Sbjct  258  IIVTRVPGSNKQSLANELAVQVGRQPDALW----LAAAILTVFALLPGFPFLIFITLAAA  313

Query  313  lafagYRLHKGARRTTARGEPVIALQRAGAKSG--TPSILPRAPLFTCAIGVRVAPDLVA  370
            +A +++ L +  RR +  G +  + + +GA +   TP+ +P   ++ CA          +
Sbjct  314  VAAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTPGAVP--LMLHCA----------S  361

Query  371  RLAPAALDRAFDEERAKLQEEQGLPFPGITLWTSDALPESTCEILMRDVPQTR-LE--LP  427
             L  + L+R +D  R +  E+ G+P+P + ++   +L+E+T   L  +V Q R LE  LP
Sbjct  362  NLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENT---LSVQVYQERVLEVVLP  418

Query  428  ADQTMLPDAASDPALAGRCTKRGPAGGLAQSY-WIDDKAAPAGVRAWRAEQVIAHETIA-  485
            +D  +L  + S        T+    G+   S+ W+D K A  + R+     V +H+ I  
Sbjct  419  PDSLLLTRPCSSLV-----TNNQVLGAKMGSFDWLDAKQAMQA-RTLGIPYVEGHQRIIT  472

Query  486  ----LLRRNAYLFLGIQETQWILDQLGLDYPGLVAEVQKALPTQRIADVLRRLLEEHIPI  541
                ++ R +  F+G+QET+ ++D +   Y  LV E+Q+ +P  ++A++L+RL+EE+I+I
Sbjct  473  CLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISI  532

Query  542  RNARDIMESLVAWGPKEKDMLMLAEYVRGDLSrylayraargarQLPAVLLDMAVEQHIR  601
            R+ R I  +LV W+PKEKD++ML+EYVR  L R L  R ++    ++ + L+ +VE+ IR
Sbjct  533  RDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIR  592

Query  602  QSIKQTPAGNFLALPPEQVRYLVDSV-ASFVGDAPRDDVALVTSMDVRRYTRRMIEARLG  660
            +SI+QT++G + AL   Q   +++ +  +F  +   +D  L+T++DVRR+ R++IE  L 
Sbjct  593  DSIRQTSSGTYSALEERQSLLILNKIKNAFAEN---QDAVLLTTLDVRRFVRKIIERDLF  649

Query  661  WLPVYSYQELGDQVQLQPLGRVTM  684
             LPV S QELGD+++L+  G + +
Sbjct  650  VLPVLSWQELGDEMNLKVAGTIEL  673

295) invA in NC_005085


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  308 bits (1154),  Expect = 8e-85, Method: Compositional matrix adjust.
 Identities = 270/668 (41%), Positives = 456/668 (69%), Gaps = 46/668 (6%)

Query  32   PTYLVDFLIGLNIVLAVLVFMGSFYIDRILSFSTFPSVLLITTLFRLALSISTSRLILIE  91
            PT +VD+LI++N+ ++V+++M S+Y+   L FS FPS+LLITTL+RLAL+IST+RL+L++
Sbjct  37   PTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQ  96

Query  92   ADAGEIIATFGQFVIGDSLAvgfvvfsivtvvqfiviTKGSERVAEVAARFSLDGMPGKQ  151
             DAGEI+ +FGQFV+G++LAVG ++F+I+TVVQFIVITKGSERVAEV+ARFSLDGMPGKQ
Sbjct  97   HDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQ  156

Query  152  MSIDADLKAGIIDADGARERRSVLERESQLYGSFDGAMkfikgdaiagiiiifvnfiggi  211
            MSID+D++AG ID+  A+  R  +++ES+L+G+ DGAMKF+KGDAIAGII+I++N+IGGI
Sbjct  157  MSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGI  216

Query  212  avgMTQHGMDLSAALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNG-DSDNMGRNIM  270
            ++G+ QH M    A++TY++L+IGDGL AQIP+LLI+I+AG+IVTRV G + ++++ ++ 
Sbjct  217  TIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELA  276

Query  271  SQLLGNPFvlvvtavlalavGMLPGFPlivflilaaalgglfY--YKRRaaagkpapgmp  328
             Q+  +P  L ++A +    ++LPGFP+++F+ LAAA+++  +  Y++            
Sbjct  277  VQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRI--------  328

Query  329  aqaakggSAPGDAARTGGADSSLGLIGNLDKVAAETVPLILLVPASrraaleqaqlaerl  388
                      ++ +R+ G+    G  G  +++++ +VPL +L  AS     + ++  + L
Sbjct  329  ----------SQDGRANGGSEEGGATG--QRMTPGAVPL-MLHCASNLHHPHLGRDIDGL  375

Query  389  rSQFFIDYGVRLPDMLLREAEGMDDNRVAVLINEIRADEF---PIRFDLARVVNP---SE  442
            R + F + GV LP++ +R    + +N ++V + + R  E    P  + L+R  ++   ++
Sbjct  376  RWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNN  435

Query  443  EILALDVQPVLERECVWVRPEDGDRLAKLGYQLRPALDELYHCLAALLARHVNEYFGVQE  502
            ++L+  + +       W+ + ++ +   LG     + + +  CL+ ++ R   E++GVQE
Sbjct  436  QVLGAKMGSF-----DWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQE  490

Query  503  TKHMLDQLEGKYPDLLKEVLRHATVQRIAEVLQRLLAERISVRNMKLIMEALALWAPREK  562
            T+ ++D +EG+Y +L+KE+ R+  V ++AE+LQRL+ E IS+R+++ I  AL +WAP+EK
Sbjct  491  TRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEK  550

Query  563  DVINLVEHVRGALARYICHKFSAGGELRAVM-VSAEVEDMVRKGVRQTSAGAFLNLEPAA  621
            D++ L E VR AL R +C++FS      +V+ ++  VE+++R ++RQTS+G++  LE   
Sbjct  551  DIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQ  610

Query  622  SDELMDLFALGLEGLGVAY---KDMVLLASVDVRRFIKKLVETRFRELEVVSFGEITDSV  678
            S        L L+ +  A+   +D VLL+++DVRRF++K++E  +  L V+S  E+ D +
Sbjct  611  S-------LLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEM  663

Query  679  SVNVIKTI  686
            +++V  TI
Sbjct  664  NLKVAGTI  671

296) JCM7686_1766 in NC_022041


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  299 bits (1121),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 266/639 (42%), Positives = 454/639 (72%), Gaps = 23/639 (3%)

Query  38   LIDLSIAFNlslsvlvlivavylRNPTSLTTLPAILLFATLFRLAIGISTTRMILLHADA  97
            ++DL IA+NL++SV++L++++YLR+P  ++ +P++LL++TL+RLA+ ISTTR++LL+ DA
Sbjct  40   MVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDA  99

Query  98   GQIVETFGKFvlggslvvgivvfliitivQFIVITKGSERVAEVSARFSLDALPGRQMSI  157
            G+IVE+FG+FV+GG+L VG+++F IIT+VQFIVITKGSERVAEVSARFSLD++PG+QMSI
Sbjct  100  GEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSI  159

Query  158  DSDMrageidiaearrrreaLQMESEFYGSMDGAMKFVKGDaiagliiiavnilgglgvg  217
            D+DMRAG ID  EA+R RE +Q ES ++G+MDGAMKFVKGDAIAG+I+I +NI+GG+ +G
Sbjct  160  DGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIG  219

Query  218  vgQNGMAFGDALHLYSVLTVGDGMVSQIPALIVAISSGIVITRITHEGSADLGRDIAAQI  277
            V Q+ M+  +A++ Y+VL++GDG+ +QIP+L+++I++GI++TR+       L+ ++A Q+
Sbjct  220  VMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNKQSLANELAVQV  279

Query  278  GGHARPlyvaalvllgfalvPGFPKLVFIalalafagaglmaTrrareaaeaeDQPGASA  337
            G ++ +L +AA +L  FAL+PGFP L+FI+LA A A+++++  R+ R  ++     G+S 
Sbjct  280  GRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDGRANGGSE  339

Query  338  RRDSRQDLMMTPMTPVQLTVGRDL-AAGLDRAAFEDAALRERTRLFDELGVPFPRLQLST  396
              ++  + M     P+ L  + +L  + L+R   +  +L  R R F++LGVP+P +++  
Sbjct  340  EGGATGQRMTPGAVPLMLHCASNLHHPHLGR---DIDGL--RWRWFEHLGVPLPEVEIRC  394

Query  397  DPLMPGDRWQLRVENVPVGEGHLPAGRLRLT----DLPDAARIMGISVERVETGPSDAQG  452
            DP ++ +   ++V +  V E  LP++ L LT     L    +++G  +   +        
Sbjct  395  DPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGAKMGSFD--------  446

Query  453  WWCPPEAAAELRHAGIPFQTPAEALARVAAGRLPRHAAEFLGVQEVSALLSATEARYASL  512
             W  +  A + R  GIP+    + +    +  + R +AEF+GVQE   L+ A E+RY+ L
Sbjct  447  -WLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGEL  505

Query  513  VAEAQKALPLQKIAAVMRRLVEEEIPVRNLRILLETIVDWAPREKDPELLAEYVRTALAR  572
            V E Q+ +P+ K+A +++RLVEE+I++R+LR ++ ++V WAP+EKD  +L+EYVR AL R
Sbjct  506  VKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRR  565

Query  573  QISFKFADGERFIPAFVVETDIEEAIRGAIRQAPSGVYLALEAQQSRKLLEALKSAIGDP  632
            ++  +F++    I+ + +  ++E+ IR++IRQ++SG Y ALE +QS  +L+ +K+A+++ 
Sbjct  566  HLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAE-  624

Query  633  TGHARPPVFLSSMDIRRFLRRFLTNHDMNFAVISHKEVA  671
                + +V+L+++D+RRF+R+++  +   ++V+S +E++
Sbjct  625  ---NQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELG  660

297) invA in NC_019670


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  295 bits (1106),  Expect = 6e-81, Method: Compositional matrix adjust.
 Identities = 280/688 (41%), Positives = 476/688 (70%), Gaps = 36/688 (5%)

Query  6    LRNVGARPELLILTLMVMIIAMLIIPLPTALVDFLIGLNIVISLLVFMGSFYIERIlsfs  65
            L  + AR ++++  ++++ + M+I+PLPT++VD+LI++N+ +S++++M S+Y+   L FS
Sbjct  10   LTMITARQDIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFS  69

Query  66   tfpallllttlfrlalsISTSRLILSQADAGEIIASFGEFVIGESLVVGFVIFSIVTIVQ  125
             FP+LLL+TTL+RLAL+IST+RL+L Q DAGEI+ +FG+FV+G +L VG +IF+I+T+VQ
Sbjct  70   VFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQ  129

Query  126  FIVITKGSERVAEVAARFSLDGMPGKQMSIDGDLKAGAMTAEEAKEKRSVLERESQLYGS  185
            FIVITKGSERVAEV+ARFSLDGMPGKQMSIDGD++AGA+ + EAK  R  +++ES+L+G+
Sbjct  130  FIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGA  189

Query  186  FDGAMKfikgdaiagiiiifvnfiggMAIGVGQMGMDlstalstytlltIGDGLVAQIPA  245
             DGAMKF+KGDAIAGII+I++N+IGG++IGV Q  M    A++TY++L+IGDGL AQIP+
Sbjct  190  MDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPS  249

Query  246  LLIAIGAGFIVTRVNGDD-ANLGRNMLAQMLGHPFvlgvtallavgvgllpgfplltflp  304
            LLI+I AG+IVTRV G +  +L+ ++  Q+  +P  L ++A +    +LLPGFP+L F+ 
Sbjct  250  LLISITAGIIVTRVPGSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFIT  309

Query  305  iaaalallVFVRRRKASRAEGQGDSRPSSTQGQAMQTGSGLLEDIDNVATETIPLMLLVP  364
            +AAA+A   F+  RK  R   +G +  +S +G A  TG       + ++  ++PLML  +
Sbjct  310  LAAAVAAPAFLLYRKNRRISQDGRANGGSEEGGA--TG-------QRMTPGAVPLMLHCA  360

Query  365  T----ARLD-ELNAARWAARFRSQFFVDYGLRIPEPQLRASDALPAHQVAVLINEVRAEQ  419
            +    ++L+ ++++ RW      + F + G+ +PE ++R   +L+ + ++V + + R  +
Sbjct  361  SNLHHPHLGRDIDGLRW------RWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLE  414

Query  420  FDIHFDHWRLLDYSPELEPMGFALVHGSD--SNRLGGV-WVNANDKERVQQLGYHLRPAD  476
              +  D   LL     L     +LV  ++  + ++G+  W++A++  + + LG     ++
Sbjct  415  VVLPPDS--LL-----LTRPCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGH  467

Query  477  EECYRCLVTLLARNIQEFFGVQETKQLLDEMETRCPDLLKEVYRHVTVQKITEVLQRLIG  536
            +    CL  ++ R   EF+GVQET+ L+D ME R  +L+KE+ R++ V K++E+LQRL+ 
Sbjct  468  QRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVE  527

Query  537  ERISVRNMKLILESLAHWASREKDALALVEHVRGSLARYISNKFAQGND-LRVLLLSAEF  595
            E IS+R+++ I+ +L  WA++EKD + L E VR +L R +  +F++ +  + VL L+   
Sbjct  528  ENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGV  587

Query  596  EEVVRKGIRQTSGGSFINLEPAESEELMDRLSVGLGSLHIAHKDMVLLCSVDVRRYIKKL  655
            E+++R +IRQTS+G++  LE  +S  +++++  +++     ++D VLL ++DVRR+++K+
Sbjct  588  EHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFA----ENQDAVLLTTLDVRRFVRKI  643

Query  656  IEGRFRELDVMSFGEISETVSVNVIKTL  683
            IE  +  L V+S  E+++ ++++V  T+
Sbjct  644  IERDLFVLPVLSWQELGDEMNLKVAGTI  671

298) Rta_29710 in NC_015677


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  287 bits (1075),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 272/656 (42%), Positives = 451/656 (69%), Gaps = 20/656 (3%)

Query  34   PLPTLVIDMLLGVNITVSVLLLVVALYIPNAValssfpslllfttlfrlalNIASTKLIL  93
            PLPT ++D+L+++N++ SV+LL++++Y+ +++ +S FPSLLL+TTL+RLAL I++T+L+L
Sbjct  35   PLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVL  94

Query  94   LHADAGHIIEafgnlvvggnlvvgivvfliiaivQFIVIAKGSERVAEVGARFTLDAMPG  153
            L+ DAG+I+EAFG++VVGGNL VG+++F II++VQFIVI+KGSERVAEV+ARF+LD+MPG
Sbjct  95   LQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPG  154

Query  154  KQMSIDADLRAGHLTGEEARIKRAHLAMESQLHGGMDGAMKFVKGDAIAGLVITAINLLA  213
            KQMSID+D+RAG + + EA+  R ++  ES+L G+MDGAMKFVKGDAIAG+++  IN+++
Sbjct  155  KQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIG  214

Query  214  GIVIGITYHGMPAAEAANVFAVLSIGDAMVSQIPSLLICVAAGVIITRVADDNKRPKPLS  273
            GI IG+  H M+A EA N +AVLSIGD++ +QIPSLLI ++AG+I+TRV++ NK  ++L+
Sbjct  215  GITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPGSNK--QSLA  272

Query  274  TEIAQQMMANPSALYLAAALLCGFAIVPGFPWFVFIGlavllvvvaRKL--QSGRVGDPE  331
             E+A Q+  +P AL LAAA+L  FA++PGFP ++FI LA  +   A  L  ++ R+++  
Sbjct  273  NELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLLYRKNRRISQDG  332

Query  332  ASPLKGLQREGARGEAPGGIEDKPTAFSSPLAVTLSAQLARSLNAELLGAAFEKERSSLQ  391
                    R  + +E  G+  ++ T    P AV L  + A +L+   LG  ++  R    
Sbjct  333  --------RANGGSEEGGATGQRMT----PGAVPLMLHCASNLHHPHLGRDIDGLRWRWF  380

Query  392  ERLGLPFPGIRLWQQATLDENAYEILVHDVPASAGVLQPGRqqvlqpppelqpRCEAGGP  451
            E+LG+P+P + ++ ++TL EN+  + V +      VL P+   + +P + L    +  G+
Sbjct  381  EHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQVLGA  440

Query  452  AGGEAKSWWADSAGL-GPAEGLAMLSHEQAVARHAVMVLHDLAHLFLGIQEVQWVLERVG  510
              G    W     ++ + + G++ +  +Q +      V++  +  F+G+QE + +++ + 
Sbjct  441  KMGSF-DWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAME  499

Query  511  QDYPGLVAEAQKVVPLQRISEVLRRLLEEQLPIRNMRAICESLILWGPKEKDILMLTEYV  570
              Y  LV E Q+ +P+ +++E+L+RL+EE+++IR++R+I  +L++W+PKEKDI+MLTEYV
Sbjct  500  GRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYV  559

Query  571  RGDLGRYlthratggtgalaavllDPSVEKMIREAIKPTPAGNYLALPPDTMVAIAQDIR  630
            R  L R L +R +     ++ + L+ +VE +IR++I+ T++G Y AL     + I + I+
Sbjct  560  RIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIK  619

Query  631  HLAGERPRAGLAVVTSMDIRRYVRRIVEVDMKWLSVYSFQELGPQVKLEPIGRVSL  686
            +  +E   A L  +T++D+RR+VR+I+E D+  L+V S QELG +++L   G + L
Sbjct  620  NAFAENQDAVL--LTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIEL  673

299) BURPS1106A_A1905 in NC_009078


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  283 bits (1059),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 279/697 (41%), Positives = 477/697 (69%), Gaps = 42/697 (6%)

Query  12   EIGIVALVIAIISLMILPLPPVAIDLLLGINITISVTLLMVTMYVPDIaalsafpslllf  71
            +I +  +++  + +MILPLP   +DLL++IN+++SV LLM+++Y+ D   +S FPSLLL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  72   ttlfrlslNIASTKSILLHAEAGNIIESFGQlvvggnlvvglvvFAIITTVQFIVIAKGS  131
            TTL+RL+L I++T+ +LL+ +AG+I+E+FGQ+VVGGNL VG+++F+IIT VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  132  ERVAEVGARFTLDALPGKQMSIDADLRSGLLSTEEARKKRATLAVESQLHGGMDGAMKFV  191
            ERVAEV+ARF+LD++PGKQMSID+D+R+G + + EA++ R  +  ES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  192  KGDAIAGLIITMINIVAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQIPSLLLSVAAG  251
            KGDAIAG+I+ +INI++GI++GV  H MSA +A N ++VLS+GD++ +QIPSLL+S++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  252  VMITRVTDERAPKRRSLGDEISHQLGSSaralyfaaflllgfaaVPGFPaalfvllaaal  311
            +++TRV    +++++SL++E++ Q+G  + AL +AA +L  FA +PGFP  +F+ LAAA+
Sbjct  258  IIVTRVP---GSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAV  314

Query  312  afaGYRLSRKGSPSSGAAR--GQEQEALRAMQRSGAKADVPPILPRAPQFACAVGVRIAP  369
            A +++ L RK    S  +R  G  +E+  + QR  + + VP +L       C        
Sbjct  315  AAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTP-GAVPLMLH------C--------  359

Query  370  DLASGLALPRLDEALDLERARLQDELGLPFPGVTMWIHPTLAAATFEVLIHDVPHLSVTL  429
              AS L  P+L+  +D  R R  ++LG+P+P V ++ +PTLA  T+ V + +   L V L
Sbjct  360  --ASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVL  417

Query  430  PARKAMLPQQRHLSPAHAALTDEQK-ARHRDLIERSEAGPPIDASGQATHWIDEPAVTAK  488
            P+   +L +     P  + +T++Q  +   + +++ +A  +++A   +   ++       
Sbjct  418  PPDSLLLTR-----PCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGH-----  467

Query  489  DSVWRAEQIIAYASVAAIRTHAPLFVGIQEVQWILDQLGADSPGLVAEVLKILPSTRIAD  548
                  ++II+  +   +   ++ F+G+QE + ++D + +    LV E+ + +P  ++A+
Sbjct  468  ------QRIITCLT-RVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAE  520

Query  549  VLRRLLEEQISIRNVRTIMESLVAWGAKEKDMLMLTEYVRGDLSRFLAHRAAQGERVLSA  608
            +L+RL+EE+ISIR++RTI  +LV W++KEKD++MLTEYVR  L R L +R ++    +S 
Sbjct  521  ILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISV  580

Query  609  VLFDLQAEQHIRQAIKQTPTGNFLALPPDDASRLVDRIQSLVGANARTDIALVTSMDirr  668
            + ++   E+ IR++I+QT++G + AL   ++  ++++I++  + N   D  L+T++D+RR
Sbjct  581  LRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQ--DAVLLTTLDVRR  638

Query  669  yvrrmierriDWLAVYSYQELGEHVELRPVGRVSLQG  705
            +VR++IER +  L+V S QELG++++L+  G + L G
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIG  675

300) BPC006_II1886 in NC_018529


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  283 bits (1059),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 279/697 (41%), Positives = 477/697 (69%), Gaps = 42/697 (6%)

Query  12   EIGIVALVIAIISLMILPLPPVAIDLLLGINITISVTLLMVTMYVPDIaalsafpslllf  71
            +I +  +++  + +MILPLP   +DLL++IN+++SV LLM+++Y+ D   +S FPSLLL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  72   ttlfrlslNIASTKSILLHAEAGNIIESFGQlvvggnlvvglvvFAIITTVQFIVIAKGS  131
            TTL+RL+L I++T+ +LL+ +AG+I+E+FGQ+VVGGNL VG+++F+IIT VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  132  ERVAEVGARFTLDALPGKQMSIDADLRSGLLSTEEARKKRATLAVESQLHGGMDGAMKFV  191
            ERVAEV+ARF+LD++PGKQMSID+D+R+G + + EA++ R  +  ES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  192  KGDAIAGLIITMINIVAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQIPSLLLSVAAG  251
            KGDAIAG+I+ +INI++GI++GV  H MSA +A N ++VLS+GD++ +QIPSLL+S++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  252  VMITRVTDERAPKRRSLGDEISHQLGSSaralyfaaflllgfaaVPGFPaalfvllaaal  311
            +++TRV    +++++SL++E++ Q+G  + AL +AA +L  FA +PGFP  +F+ LAAA+
Sbjct  258  IIVTRVP---GSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAV  314

Query  312  afaGYRLSRKGSPSSGAAR--GQEQEALRAMQRSGAKADVPPILPRAPQFACAVGVRIAP  369
            A +++ L RK    S  +R  G  +E+  + QR  + + VP +L       C        
Sbjct  315  AAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTP-GAVPLMLH------C--------  359

Query  370  DLASGLALPRLDEALDLERARLQDELGLPFPGVTMWIHPTLAAATFEVLIHDVPHLSVTL  429
              AS L  P+L+  +D  R R  ++LG+P+P V ++ +PTLA  T+ V + +   L V L
Sbjct  360  --ASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVL  417

Query  430  PARKAMLPQQRHLSPAHAALTDEQK-ARHRDLIERSEAGPPIDASGQATHWIDEPAVTAK  488
            P+   +L +     P  + +T++Q  +   + +++ +A  +++A   +   ++       
Sbjct  418  PPDSLLLTR-----PCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGH-----  467

Query  489  DSVWRAEQIIAYASVAAIRTHAPLFVGIQEVQWILDQLGADSPGLVAEVLKILPSTRIAD  548
                  ++II+  +   +   ++ F+G+QE + ++D + +    LV E+ + +P  ++A+
Sbjct  468  ------QRIITCLT-RVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAE  520

Query  549  VLRRLLEEQISIRNVRTIMESLVAWGAKEKDMLMLTEYVRGDLSRFLAHRAAQGERVLSA  608
            +L+RL+EE+ISIR++RTI  +LV W++KEKD++MLTEYVR  L R L +R ++    +S 
Sbjct  521  ILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISV  580

Query  609  VLFDLQAEQHIRQAIKQTPTGNFLALPPDDASRLVDRIQSLVGANARTDIALVTSMDirr  668
            + ++   E+ IR++I+QT++G + AL   ++  ++++I++  + N   D  L+T++D+RR
Sbjct  581  LRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQ--DAVLLTTLDVRR  638

Query  669  yvrrmierriDWLAVYSYQELGEHVELRPVGRVSLQG  705
            +VR++IER +  L+V S QELG++++L+  G + L G
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIG  675

301) BURPS668_A1997 in NC_009075


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  281 bits (1050),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 279/697 (41%), Positives = 476/697 (69%), Gaps = 42/697 (6%)

Query  12   EIGIVALVIAIISLMILPLPPVAIDLLLGINITISVTLLMVTMYVPDIaalsafpslllf  71
            +I +  +++  + +MILPLP   +DLL++IN+++SV LLM+++Y+ D   +S FPSLLL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  72   ttlfrlslNIASTKSILLHAEAGNIIESFGQlvvggnlvvglvvFAIITTVQFIVIAKGS  131
            TTL+RL+L I++T+ +LL+ +AG+I+E+FGQ+VVGGNL VG+++F+IIT VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  132  ERVAEVGARFTLDALPGKQMSIDADLRSGLLSTEEARKKRATLAVESQLHGGMDGAMKFV  191
            ERVAEV+ARF+LD++PGKQMSID+D+R+G + + EA++ R  +  ES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  192  KGDAIAGLIITMINIVAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQIPSLLLSVAAG  251
            KGDAIAG+I+ +INI++GI++GV  H MSA +A N ++VLS+GD++ +QIPSLL+S++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  252  VMITRVTDERAPKRRSLGDEISHQLGSSaralyfaaflllgfaaVPGFPaalfvllaaal  311
            +++TRV    +++++SL++E++ Q+G  + AL +AA +L  FA +PGFP  +F+ LAAA+
Sbjct  258  IIVTRVP---GSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAV  314

Query  312  afaGHRLSRKGSPSSGAAR--GQEQEALRAMQRSGAKADVPPILPRAPQFACAVGVRIAP  369
            A ++  L RK    S  +R  G  +E+  + QR  + + VP +L       C        
Sbjct  315  AAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTP-GAVPLMLH------C--------  359

Query  370  DLASGLALPRLDEALDLERARLQDELGLPFPGVTMWIHPTLAAATFEVLIHDVPHLSVTL  429
              AS L  P+L+  +D  R R  ++LG+P+P V ++ +PTLA  T+ V + +   L V L
Sbjct  360  --ASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVL  417

Query  430  PARKAMLPQQRHLSPAHAALTDEQK-ARHRDLIERSEAGPPIDASGQATHWIDEPAVTAK  488
            P+   +L +     P  + +T++Q  +   + +++ +A  +++A   +   ++       
Sbjct  418  PPDSLLLTR-----PCSSLVTNNQVLGAKMGSFDWLDAKQAMQARTLGIPYVEGH-----  467

Query  489  DSVWRAEQIIAYASVAAIRTHAPLFVGIQEVQWILDQLGADSPGLVAEVLKILPSTRIAD  548
                  ++II+  +   +   ++ F+G+QE + ++D + +    LV E+ + +P  ++A+
Sbjct  468  ------QRIITCLT-RVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAE  520

Query  549  VLRRLLEEQISIRNVRTIMESLVAWGAKEKDMLMLTEYVRGDLSRFLAHRAAQGERVLSA  608
            +L+RL+EE+ISIR++RTI  +LV W++KEKD++MLTEYVR  L R L +R ++    +S 
Sbjct  521  ILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISV  580

Query  609  VLFDLQAEQHIRQAIKQTPTGNFLALPPDDASRLVDRIQSLVGANARTDIALVTSMDirr  668
            + ++   E+ IR++I+QT++G + AL   ++  ++++I++  + N   D  L+T++D+RR
Sbjct  581  LRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQ--DAVLLTTLDVRR  638

Query  669  yvrrmierriDWLAVYSYQELGEHVELRPVGRVSLQG  705
            +VR++IER +  L+V S QELG++++L+  G + L G
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIG  675

302) BDL_4708 in NC_021877


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  278 bits (1042),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 281/697 (41%), Positives = 478/697 (69%), Gaps = 42/697 (6%)

Query  12   EIGIVALVIAIISLMILPLPPVAIDLLLGINITISVTLLMVTMYVPDIaalsafpslllf  71
            +I +  +++  + +MILPLP   +DLL++IN+++SV LLM+++Y+ D   +S FPSLLL+
Sbjct  18   DIFLAVMLLVAVFMMILPLPTTMVDLLIAINLAFSVILLMISIYLRDPLEFSVFPSLLLI  77

Query  72   ttlfrlslNIASTKSILLHAEAGNIIESFGQlvvggnlvvglvvFAIITTVQFIVIAKGS  131
            TTL+RL+L I++T+ +LL+ +AG+I+E+FGQ+VVGGNL VG+++F+IIT VQFIVI+KGS
Sbjct  78   TTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGMIIFTIITVVQFIVITKGS  137

Query  132  ERVAEVGARFTLDALPGKQMSIDADLRSGLLSTEEARKKRATLAVESQLHGGMDGAMKFV  191
            ERVAEV+ARF+LD++PGKQMSID+D+R+G + + EA++ R  +  ES+L G+MDGAMKFV
Sbjct  138  ERVAEVSARFSLDGMPGKQMSIDGDMRAGAIDSVEAKRLRERVQKESRLFGAMDGAMKFV  197

Query  192  KGDAIAGLIITMINIVAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQIPSLLLSVAAG  251
            KGDAIAG+I+ +INI++GI++GV  H MSA +A N ++VLS+GD++ +QIPSLL+S++AG
Sbjct  198  KGDAIAGIIVILINIIGGITIGVMQHKMSAEEAMNTYAVLSIGDGLCAQIPSLLISITAG  257

Query  252  VMITRVTDERAPKRRSLGDEISHQLGSSaralyfaaflllgfaaVPGFPaalfvllaaal  311
            +++TRV    +++++SL++E++ Q+G  + AL +AA +L  FA +PGFP  +F+ LAAA+
Sbjct  258  IIVTRVP---GSNKQSLANELAVQVGRQPDALWLAAAILTVFALLPGFPFLIFITLAAAV  314

Query  312  afaGHRLSRKGSPSSGAAR--GQEQEALRAMQRSGAKADVPPILPRAPQFACAVGVRIAP  369
            A ++  L RK    S  +R  G  +E+  + QR  + + VP +L       C        
Sbjct  315  AAPAFLLYRKNRRISQDGRANGGSEEGGATGQRMTP-GAVPLMLH------C--------  359

Query  370  DLASGLALPRLDEALDLERARLQDELGLPFPGVTMWIHPTLAAATFEVLIHDVPHLSVTL  429
              AS L  P+L+  +D  R R  ++LG+P+P V ++ +PTLA  T+ V + +   L V L
Sbjct  360  --ASNLHHPHLGRDIDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVL  417

Query  430  PARKAMLPQQRHLSPAHAALTDEQK-ARHRDLIERSEAGPPIDASGQATYWIDEPAVTAK  488
            P+   +L +     P  + +T++Q  +   + +++ +A  +++A       ++ P V + 
Sbjct  418  PPDSLLLTR-----PCSSLVTNNQVLGAKMGSFDWLDAKQAMQART-----LGIPYVEGH  467

Query  489  DSVWRAEQIIAYASVAAIRTHAPLFVGIQEVQWILDQLGADSPGLVAEVLKILPSTRIAD  548
                  ++II+  +   +   ++ F+G+QE + ++D + +    LV E+ + +P  ++A+
Sbjct  468  ------QRIITCLT-RVFERYTAEFIGVQETRYLMDAMEGRYGELVKELQRQIPVGKVAE  520

Query  549  VLRRLLEEQISIRNVRTIMESLVAWGAKEKDMLMLTEYVRGDLSRFLAHRAAQGERVLSA  608
            +L+RL+EE+ISIR++RTI  +LV W++KEKD++MLTEYVR  L R L +R ++    +S 
Sbjct  521  ILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISV  580

Query  609  VLFDLQAEQHIRQAIKQTPTGNFLALPPDDASRLVDRIQSLVGANARTDIALVTSMDirr  668
            + ++   E+ IR++I+QT++G + AL   ++  ++++I++  + N   D  L+T++D+RR
Sbjct  581  LRLGDGVEHLIRDSIRQTSSGTYSALEERQSLLILNKIKNAFAENQ--DAVLLTTLDVRR  638

Query  669  yvrrmierriDWLAVYSYQELGEHVELRPVGRVSLQG  705
            +VR++IER +  L+V S QELG++++L+  G + L G
Sbjct  639  FVRKIIERDLFVLPVLSWQELGDEMNLKVAGTIELIG  675

303) sctV in NC_014718


> NC_003143_P1|13|G13|218927472|YP_002345347.1|Yersinia_pestis_CO92|+|10410..12458|-|YPO0266|secretion 
system apparatus protein 
SsaV
Length=682

 Score =  253 bits (944),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 265/662 (41%), Positives = 448/662 (68%), Gaps = 49/662 (7%)

Query  42   NIAVSVTLLMITMYVPDIVALSVFPslllfttlyrlslNIASTKSILLHADAGHIIEAFG  101
            N+A SV LLMI++Y+ D + +SVFPSLLL+TTLYRL+L I++T+ +LL+ DAG+I+EAFG
Sbjct  48   NLAFSVILLMISIYLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFG  107

Query  102  QlvvggnlvvglvvfviittvqfiviAKGSERVAEVGARFTLDALPGKQMSIDADLRANL  161
            Q+VVGGNL VG+++F IIT VQFIVI+KGSERVAEV+ARF+LD++PGKQMSID+D+RA  
Sbjct  108  QFVVGGNLAVGMIIFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGA  167

Query  162  LTADEARRKRATLAIESQLHGGMDGAMKFVKGDaiagliitginiiagiavgvaYHGMSA  221
            + + EA+R R  +  ES+L G+MDGAMKFVKGDAIAG+I+  INII+GI++GV  H MSA
Sbjct  168  IDSVEAKRLRERVQKESRLFGAMDGAMKFVKGDAIAGIIVILINIIGGITIGVMQHKMSA  227

Query  222  GEAANRFSVLSVGDAMVSQIPSLLLSVAAGVMITRVADERDAHPQSLGSEMGRQLSSSTR  281
             EA N ++VLS+GD++ +QIPSLL+S++AG+++TRV++   ++ QSL++E++ Q++    
Sbjct  228  EEAMNTYAVLSIGDGLCAQIPSLLISITAGIIVTRVPG---SNKQSLANELAVQVGRQPD  284

Query  282  alffaailllgfaaVPGFPAPLFLLLSAMLAFCGYKLSHKRPLLDEYRSEPVASMQRAGS  341
            AL +AA +L  FA +PGFP  +F+ L+A +A  ++ L         YR +     +R + 
Sbjct  285  ALWLAAAILTVFALLPGFPFLIFITLAAAVAAPAFLL---------YRKN-----RRISQ  330

Query  342  KGDASGILPRAPQFTPAVGVRIAPDLMPRL--SAAALDQS-FASERNQLQ----EELGLP  394
             G A+G    +++   A G R++P+ +P +   A+ L+++ ++ + + L+    E+LG+P
Sbjct  331  DGRANG----GSEEGGATGQRMTPGAVPLMLHCASNLHHPHLGRDIDGLRWRWFEHLGVP  386

Query  395  FPGITMWVGENTRASHFEILIHDVPYVTIELPPGKVMLPPRNGdldatqadavlaalhar  454
            +P + ++ +     + + + + +   + + LPP+ ++L    + L + +           
Sbjct  387  LPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLVTNNQV---------  437

Query  455  aEPRGGLDGGAGPTWWMDEK-AVPPK---IQAWQAEHVIAHSAIALLRRHASLFLGIQEV  510
                  L++  G+  W+D K A+ ++   I   ++++ I      ++ R ++ F+G+QE 
Sbjct  438  ------LGAKMGSFDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQET  491

Query  511  QWILEQQGNEYPGLVAEVQKAVPPQRIADVLRRLLEEQVPIRNMRTILESLLAWGTKEKD  570
            + +++     Y  LV E+Q+ +P  ++A++L+RL+EE+++IR++RTI+ +L+ W+ KEKD
Sbjct  492  RYLMDAMEGRYGELVKELQRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKD  551

Query  571  MLMLTEYVRGdlarflahraaagagllqavlldlPVEQHIRQAIKQTPTGNYLALAPDEV  630
            ++MLTEYVR  L R L +R +     +  + L+  VE+ IR++I+QT++G Y AL   + 
Sbjct  552  IVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTSSGTYSALEERQS  611

Query  631  TFLVNKIQSLAGTDERDGVALVTSMDIRRYVRRMIENRISWLPVYSYQELGEHVELKPLG  690
             +++NKI++  +  E ++  L+T++D+RR+VR++IE  +  LPV S QELG++++LK  G
Sbjct  612  LLILNKIKN--AFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAG  669

Query  691  RV  692
             +
Sbjct  670  TI  671