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PAthogenisity Island DataBase (PAI DB)

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Homologs of tcpQ gene of AF325734

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) tcpQ in NC_012582


> AF325734|13|G13|13377552|AAK20787.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|19477..19929|tcpQ|-|toxin-coregulated 
pilus 
biosynthesis protein Q
Length=150

 Score =  205 bits (762),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 147/150 (98%), Positives = 150/150 (100%), Gaps = 0/150 (0%)

Query  1    MKKNYYIGACIALILSGPTFAQGEMHKTNEQIAEQSSVDLIAEIYHSDRYAetfieseef  60
            MKKNYYIGACIALILSGPTFAQGEMH+TNEQIAEQSSVDLIAEIYHSDRYAETF+ESE+F
Sbjct  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF  60

Query  61   eqeestskePILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120
            EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT
Sbjct  61   EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120

Query  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150
            ELASDINQIGIDINFKIFQKNKVIVVYSVR
Sbjct  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150

2) tcpQ in NC_009457


> AF325734|13|G13|13377552|AAK20787.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|19477..19929|tcpQ|-|toxin-coregulated 
pilus 
biosynthesis protein Q
Length=150

 Score =  205 bits (762),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 147/150 (98%), Positives = 150/150 (100%), Gaps = 0/150 (0%)

Query  1    MKKNYYIGACIALILSGPTFAQGEMHKTNEQIAEQSSVDLIAEIYHSDRYAetfieseef  60
            MKKNYYIGACIALILSGPTFAQGEMH+TNEQIAEQSSVDLIAEIYHSDRYAETF+ESE+F
Sbjct  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF  60

Query  61   eqeestskePILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120
            EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT
Sbjct  61   EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120

Query  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150
            ELASDINQIGIDINFKIFQKNKVIVVYSVR
Sbjct  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150

3) O3Y_03860 in NC_016944


> AF325734|13|G13|13377552|AAK20787.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|19477..19929|tcpQ|-|toxin-coregulated 
pilus 
biosynthesis protein Q
Length=150

 Score =  205 bits (764),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 150/150 (100%), Positives = 150/150 (100%), Gaps = 0/150 (0%)

Query  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAetfveseqf  60
            MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF
Sbjct  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF  60

Query  61   eqeestskePILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120
            EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT
Sbjct  61   EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120

Query  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150
            ELASDINQIGIDINFKIFQKNKVIVVYSVR
Sbjct  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150

4) tcpQ in NC_012578


> AF325734|13|G13|13377552|AAK20787.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|19477..19929|tcpQ|-|toxin-coregulated 
pilus 
biosynthesis protein Q
Length=150

 Score =  205 bits (764),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 150/150 (100%), Positives = 150/150 (100%), Gaps = 0/150 (0%)

Query  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAetfveseqf  60
            MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF
Sbjct  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF  60

Query  61   eqeestskePILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120
            EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT
Sbjct  61   EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120

Query  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150
            ELASDINQIGIDINFKIFQKNKVIVVYSVR
Sbjct  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150

5) VCD_003498 in NC_012668


> AF325734|13|G13|13377552|AAK20787.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|19477..19929|tcpQ|-|toxin-coregulated 
pilus 
biosynthesis protein Q
Length=150

 Score =  205 bits (764),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 150/150 (100%), Positives = 150/150 (100%), Gaps = 0/150 (0%)

Query  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAetfveseqf  60
            MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF
Sbjct  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF  60

Query  61   eqeestskePILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120
            EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT
Sbjct  61   EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120

Query  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150
            ELASDINQIGIDINFKIFQKNKVIVVYSVR
Sbjct  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150

6) tcpQ in NC_016445


> AF325734|13|G13|13377552|AAK20787.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|19477..19929|tcpQ|-|toxin-coregulated 
pilus 
biosynthesis protein Q
Length=150

 Score =  205 bits (764),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 150/150 (100%), Positives = 150/150 (100%), Gaps = 0/150 (0%)

Query  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAetfveseqf  60
            MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF
Sbjct  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF  60

Query  61   eqeestskePILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120
            EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT
Sbjct  61   EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120

Query  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150
            ELASDINQIGIDINFKIFQKNKVIVVYSVR
Sbjct  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150

7) VC0830 in NC_002505


> AF325734|13|G13|13377552|AAK20787.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|19477..19929|tcpQ|-|toxin-coregulated 
pilus 
biosynthesis protein Q
Length=150

 Score =  205 bits (764),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 150/150 (100%), Positives = 150/150 (100%), Gaps = 0/150 (0%)

Query  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAetfveseqf  60
            MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF
Sbjct  1    MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF  60

Query  61   eqeestskePILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120
            EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT
Sbjct  61   EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT  120

Query  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150
            ELASDINQIGIDINFKIFQKNKVIVVYSVR
Sbjct  121  ELASDINQIGIDINFKIFQKNKVIVVYSVR  150