Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
sigma-54-dependent enhancer-binding protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
3e-153 |
100 |
|
sigma-54-dependent enhancer-binding protein HrpS |
NC_013961 (Erwinia amylovora CFBP1430) |
3e-153 |
100 |
|
Sigma-54-dependent enhancer-binding protein HrpS |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
4e-150 |
97 |
|
Hrp/hrc secretion/translocation pathway protein HrpS |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
4e-150 |
97 |
|
Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster) |
NC_010694 (Erwinia tasmaniensis Et1/99) |
4e-140 |
91 |
|
hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein |
NC_017445 (Erwinia sp. Ejp617) |
8e-140 |
97 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_022268 (Serratia sp. ATCC 39006) |
4e-92 |
68 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_013592 (Dickeya dadantii Ech586) |
4e-90 |
64 |
|
HrpS type III protein secretion system regulatory protein |
NC_014500 (Dickeya dadantii 3937) |
6e-90 |
61 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_012912 (Dickeya zeae Ech1591) |
9e-90 |
61 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_012917 (Pectobacterium carotovorum PC1) |
5e-89 |
66 |
|
sigma-54-dependent enhancer-binding protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
4e-88 |
66 |
|
HrpS |
NC_018525 (Pectobacterium carotovorum PCC21) |
8e-88 |
67 |
|
type III secretion system transcriptional regulator RspS |
NC_017911 (Pseudomonas fluorescens A506) |
2e-77 |
56 |
|
Fis family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
2e-76 |
58 |
|
protein HrpS |
NC_016830 (Pseudomonas fluorescens F113) |
1e-75 |
58 |
|
sigma-54 interacting regulator |
NC_020064 (Serratia marcescens FGI94) |
4e-74 |
61 |
|
putative type III secretion system, regulatory protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
1e-72 |
54 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
1e-72 |
54 |
|
type III transcriptional regulator HrpR |
NC_005773 (Pseudomonas syringae 1448A) |
3e-70 |
55 |
|
type III transcriptional regulator HrpR |
NC_004578 (Pseudomonas syringae DC3000) |
2e-69 |
56 |
|
type III transcriptional regulator HrpR |
NC_007005 (Pseudomonas syringae B728a) |
3e-69 |
55 |
|
type III transcriptional regulator HrpS |
NC_004578 (Pseudomonas syringae DC3000) |
1e-67 |
54 |
|
type III transcriptional regulator HrpS |
NC_005773 (Pseudomonas syringae 1448A) |
3e-64 |
54 |
|
type III transcriptional regulator HrpS |
NC_007005 (Pseudomonas syringae B728a) |
7e-64 |
52 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
3e-63 |
52 |
|
type III secretion system transcriptional regulator RspS |
NC_020209 (Pseudomonas poae RE*1-1-14) |
5e-57 |
57 |
|
transcriptional regulator |
NC_018080 (Pseudomonas aeruginosa DK2) |
1e-45 |
42 |
|
putative transcriptional regulator |
NC_020912 (Pseudomonas aeruginosa B136-33) |
8e-46 |
42 |
|
putative transcriptional regulator |
NC_011770 (Pseudomonas aeruginosa LESB58) |
9e-46 |
42 |
|
putative transcriptional regulator |
NC_017548 (Pseudomonas aeruginosa M18) |
9e-46 |
42 |
|
transcriptional regulator |
NC_002516 (Pseudomonas aeruginosa PAO1) |
9e-46 |
42 |
|
Fis family transcriptional regulator |
NC_021577 (Pseudomonas aeruginosa RP73) |
9e-46 |
42 |
|
lateral flagellar RpoN-interacting regulatory protein |
NC_017626 (Escherichia coli 042) |
9e-41 |
43 |
|
lateral flagellar RpoN-interacting regulatory protein |
NC_011751 (Escherichia coli UMN026) |
9e-41 |
43 |
|
Sigma54 specific transcriptional regulator, Fis family |
NC_020409 (Desulfovibrio piezophilus C1TLV30) |
1e-40 |
41 |
|
Fis family transcriptional regulator |
NC_013960 (Nitrosococcus halophilus Nc 4) |
3e-40 |
43 |
|
hypothetical protein |
NC_017644 (Escherichia coli NA114) |
2e-39 |
42 |
|
Fis family transcriptional regulator |
NC_015388 (Desulfobacca acetoxidans DSM 11109) |
2e-39 |
41 |
|
lateral flagellar RpoN-interacting regulatory protein LafK |
NC_010498 (Escherichia coli SMS-3-5) |
3e-39 |
42 |
|
putative sigma-54 specific transcriptional regulator |
NC_010468 (Escherichia coli ATCC 8739) |
4e-39 |
42 |
|
putative lateral flagellar RpoN-interacting regulatory protein |
NC_013364 (Escherichia coli 11128) |
5e-39 |
41 |
|
lateral flagellar RpoN-interacting regulatory protein |
NC_013361 (Escherichia coli 11368) |
5e-39 |
41 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_016902 (Escherichia coli KO11FL) |
5e-39 |
41 |
|
putative lateral flagellar RpoN-interacting regulatory protein |
NC_017660 (Escherichia coli KO11FL) |
5e-39 |
41 |
|
transcriptional regulator |
NC_022364 (Escherichia coli LY180) |
5e-39 |
41 |
|
Lateral flagellar RpoN-interacting regulatory protein |
NC_017635 (Escherichia coli W) |
5e-39 |
41 |
|
putative lateral flagellar RpoN-interacting regulatory protein |
NC_017664 (Escherichia coli W) |
5e-39 |
41 |
|
Fis family transcriptional regulator |
NC_015572 (Methylomonas methanica MC09) |
3e-38 |
44 |
|
sigma-54 dependent trancsriptional regulator |
NC_008639 (Chlorobium phaeobacteroides DSM 266) |
1e-37 |
41 |
|
sigma-54 factor interaction domain-containing protein |
NC_016803 (Desulfovibrio desulfuricans ND132) |
1e-37 |
41 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_016629 (Desulfovibrio africanus Walvis Bay) |
8e-37 |
41 |
|
putative Fis family transcriptional regulator |
NC_022444 (Desulfovibrio gigas ATCC 19364) |
2e-36 |
41 |
|
fis family transcriptional regulator |
NC_012796 (Desulfovibrio magneticus RS-1) |
2e-35 |
41 |
|
hypothetical protein |
NC_013422 (Halothiobacillus neapolitanus c2) |
6e-34 |
41 |
|
sigma-54 dependent trancsriptional regulator |
NC_009901 (Shewanella pealeana ATCC 700345) |
8e-34 |
41 |
|
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
NC_016633 (Sphaerochaeta pleomorpha Grapes) |
6e-33 |
41 |
|
DNA-binding transcriptional activator |
NC_016617 (Azospirillum brasilense Sp245) |
4e-31 |
45 |
|
Psp operon transcriptional activator |
NC_018106 (Klebsiella oxytoca E718) |
2e-30 |
41 |
|
phage shock protein operon transcriptional activator |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
2e-30 |
41 |
|
Fis family transcriptional regulator |
NC_014541 (Ferrimonas balearica DSM 9799) |
3e-27 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF083877' AND ph.id_pai_orf='13' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc