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Homologs of cdd4 gene of X92982

576

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) cdd4
( YP_001087143.2 )

ABC transporter lantibiotic/multidrug-family ATP-binding protein

NC_009089
(Clostridium difficile 630)

1e-137

2) cdd4
( YP_003213647.1 )

lantibiotic ABC transporter ATP-binding protein

NC_013315
(Clostridium difficile CD196)

2e-137

3) d4
( YP_003217094.1 )

lantibiotic ABC transporter ATP-binding protein

NC_013316
(Clostridium difficile R20291)

2e-137

4) BBR47_30950
( YP_002772576.1 )

ABC transporter ATP-binding protein

NC_012491
(Brevibacillus brevis NBRC 100599)

9e-91

5) Desgi_2301
( YP_007945399.1 )

ABC-type multidrug transport system, ATPase component

NC_021184
(Desulfotomaculum gibsoniae DSM 7213)

2e-89

6) Cbei_2844
( YP_001309948.1 )

ABC transporter

NC_009617
(Clostridium beijerinckii NCIMB 8052)

6e-89

7) Awo_c00700
( YP_005267773.1 )

ABC transporter ATP-binding protein

NC_016894
(Acetobacterium woodii DSM 1030)

1e-88

8) ELI_2309
( YP_003960255.1 )

putative lantibiotic ABC transporter

NC_014624
(Eubacterium limosum KIST612)

9e-89

9) Desru_0843
( YP_004544407.1 )

ABC transporter-like protein

NC_015589
(Desulfotomaculum ruminis DSM 2154)

8e-85

10) DSY2711
( YP_518944.1 )

hypothetical protein

NC_007907
(Desulfitobacterium hafniense Y51)

9e-83

11) GYMC10_3916
( YP_003243953.1 )

ABC transporter-like protein

NC_013406
(Paenibacillus sp. Y412MC10)

2e-82

12) Dhaf_3870
( YP_002460322.1 )

ABC transporter

NC_011830
(Desulfitobacterium hafniense DCB-2)

2e-82

13) mrsF
( YP_035264.1 )

ABC transporter ATP-binding protein

NC_005957
(Bacillus thuringiensis 97-27)

2e-82

14) mrsF
( YP_003790858.1 )

ABC transporter ATP-binding protein

NC_014335
(Bacillus cereus CI)

4e-82

15) cdd4
( YP_082511.1 )

ABC transporter ATP-binding protein

NC_006274
(Bacillus cereus E33L)

3e-80

16) bcf_09280
( YP_005118491.1 )

ABC transporter ATP-binding protein

NC_016779
(Bacillus cereus F837/76)

7e-78

17) YBT020_10210
( YP_005565706.1 )

ABC transporter ATP-binding protein

NC_017200
(Bacillus thuringiensis YBT-020)

2e-77

18) BALH_1667
( YP_894500.1 )

ABC transporter ATP-binding protein

NC_008600
(Bacillus thuringiensis Al Hakam)

3e-77

19) bcrA
( YP_006330909.1 )

Bacitracin transport ATP-binding protein

NC_017912
(Bacillus amyloliquefaciens Y2)

3e-76

20) mrsF
( YP_005423183.1 )

ATP-binding protein MrsF

NC_017061
(Bacillus amyloliquefaciens YAU B9601-Y2)

3e-76

21) GY4MC1_3912
( YP_003991133.1 )

ABC transporter

NC_014651
(Geobacillus sp. Y4.1MC1)

3e-76

22) mrsF
( YP_001423226.1 )

MrsF

NC_009725
(Bacillus amyloliquefaciens FZB42)

1e-75

23) bcrA
( YP_007499241.1 )

Bacitracin transport ATP-binding protein BcrA

NC_020410
(Bacillus amyloliquefaciens UCMB5036)

2e-75

24) GTNG_1960
( YP_001126060.1 )

ABC transporter ATP-binding protein

NC_009328
(Geobacillus thermodenitrificans NG80-2)

2e-75

25) SAIN_0924
( YP_008509366.1 )

ABC transporter, ATP-binding protein

NC_022244
(Streptococcus anginosus C1051)

4e-75

26) Bsph_4477
( YP_001700058.1 )

ABC transporter ATP-binding protein

NC_010382
(Lysinibacillus sphaericus C3-41)

6e-75

27) Curi_c27460
( YP_006789586.1 )

bacitracin transporter ATP-binding protein

NC_018664
(Clostridium acidurici 9a)

1e-74

28) bcrA
( YP_006251169.1 )

putative bacitracin transport ATP-binding protein BcrA

NC_017768
(Streptococcus mutans LJ23)

2e-73

29) SMUGS5_05100
( YP_006490325.1 )

bacitracin transport ATP-binding protein BcrA

NC_018089
(Streptococcus mutans GS-5)

3e-73

30) HN6_01167
( YP_005864207.1 )

ABC transporter ATP-binding protein

NC_017481
(Lactobacillus salivarius CECT 5713)

4e-73

31) LSL_1384
( YP_536271.1 )

ABC transporter ATP-binding protein

NC_007929
(Lactobacillus salivarius UCC118)

4e-73

32) bcrA1
( YP_005958094.1 )

spermidine/putrescine import ATP-binding protein potA

NC_017542
(Paenibacillus polymyxa M1)

7e-73

33) PPSC2_c0482
( YP_003944707.1 )

cdd4

NC_014622
(Paenibacillus polymyxa SC2)

8e-73

34) Olsu_0635
( YP_003800630.1 )

ABC transporter

NC_014363
(Olsenella uli DSM 7084)

9e-73

35) ccmA3
( YP_005959062.1 )

ABC-type multidrug transport system, ATPase component

NC_017542
(Paenibacillus polymyxa M1)

3e-72

36) PPSC2_c1559
( YP_003945777.1 )

multidrug ABC transporter ATPase

NC_014622
(Paenibacillus polymyxa SC2)

3e-72

37) PPE_00449
( YP_003868842.1 )

bacitracin transport ATP-binding protein bcrA

NC_014483
(Paenibacillus polymyxa E681)

2e-71

38) PPE_01449
( YP_003869825.1 )

bacitracin transport ATP-binding protein bcrA

NC_014483
(Paenibacillus polymyxa E681)

2e-71

39) HPL003_09890
( YP_005074962.1 )

bacitracin transport ATP-binding protein bcrA

NC_016641
(Paenibacillus terrae HPL-003)

2e-71

40) BaLi_c01810
( YP_008076344.1 )

putative ABC transporter ATP-binding protein

NC_021362
(Bacillus licheniformis 9945A)

3e-71

41) BCZK2403
( YP_083992.1 )

ABC transporter ATP-binding protein

NC_006274
(Bacillus cereus E33L)

2e-69

42) CLJU_c13790
( YP_003779549.1 )

ABC transporter ATPase

NC_014328
(Clostridium ljungdahlii ATCC 49587)

5e-69

43) GYMC10_0615
( YP_003240725.1 )

ABC transporter-like protein

NC_013406
(Paenibacillus sp. Y412MC10)

2e-68

44) BH0445
( NP_241311.1 )

ABC transporter ATP-binding protein

NC_002570
(Bacillus halodurans C-125)

9e-68

45) CKL_3047
( YP_001396426.1 )

transporter

NC_009706
(Clostridium kluyveri DSM 555)

2e-66

46) CKR_2692
( YP_002473157.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

2e-66

47) HMPREF9154_0387
( YP_006510722.1 )

bacitracin ABC transporter ATP-binding protein

NC_018142
(Propionibacterium propionicum F0230a)

7e-66

48) FPR_26380
( YP_007801161.1 )

ABC-type multidrug transport system, ATPase component

NC_021020
(Faecalibacterium prausnitzii SL3/3)

6e-65

49) Shel_05770
( YP_003142985.1 )

multidrug ABC transporter ATPase

NC_013165
(Slackia heliotrinireducens DSM 20476)

3e-63

50) bcrA
( YP_006510492.1 )

bacitracin ABC transporter ATP-binding protein

NC_018142
(Propionibacterium propionicum F0230a)

5e-63

51) Ksed_23680
( YP_003150104.1 )

multidrug ABC transporter ATPase

NC_013169
(Kytococcus sedentarius DSM 20547)

9e-63

52) SMU_1148
( NP_721534.1 )

transporter, ATP-binding protein; bacteriocin immunity protein

NC_004350
(Streptococcus mutans UA159)

4e-62

53) HMPREF9154_1693
( YP_006511927.1 )

bacitracin ABC transporter ATP-binding protein

NC_018142
(Propionibacterium propionicum F0230a)

3e-61

54) Acid345_1438
( YP_590514.1 )

ABC transporter ATPase

NC_008009
(Candidatus Koribacter versatilis Ellin345)

3e-61

55) HMPREF9154_1350
( YP_006511611.1 )

bacitracin ABC transporter ATP-binding protein

NC_018142
(Propionibacterium propionicum F0230a)

9e-61

56) LGMK_08450
( YP_004706362.1 )

putative ABC transporter ATP-binding protein

NC_015734
(Leuconostoc sp. C2)

5e-60

57) BAST_0760
( YP_006864910.1 )

ABC transporter, ATP binding protein

NC_018720
(Bifidobacterium asteroides PRL2011)

6e-60

58) LKI_03865
( YP_003621284.1 )

probable ABC transporter, ATP-binding protein; probable MrsFprotein

NC_014136
(Leuconostoc kimchii IMSNU 11154)

8e-60

59) BaLi_c01770
( YP_008076340.1 )

putative ABC transporter ATP-binding protein

NC_021362
(Bacillus licheniformis 9945A)

1e-59

60) BH0448
( NP_241314.1 )

ABC transporter ATP-binding protein

NC_002570
(Bacillus halodurans C-125)

2e-59

61) H04402_00621
( YP_005677176.1 )

multidrug ABC transporter ATPase

NC_017299
(Clostridium botulinum H04402 065)

3e-59

62) ROI_39470
( YP_007833734.1 )

ABC-type multidrug transport system, ATPase component

NC_021040
(Roseburia intestinalis M50/1)

8e-59

63) clvF
( YP_001222706.1 )

putative ABC transporter ATP-binding protein

NC_009480
(Clavibacter michiganensis NCPPB 382)

9e-59

64) sboF
( YP_006309913.1 )

SboF

NC_017905
(Streptococcus parasanguinis FW213)

3e-58

65) EUS_03370
( YP_007774561.1 )

ABC-type multidrug transport system, ATPase component

NC_021011
(Eubacterium siraeum 70/3)

4e-58

66) bcrA
( YP_003373420.1 )

bacitracin transport ATP-binding protein BcrA

NC_013721
(Gardnerella vaginalis 409-05)

5e-58

67) bcrA
( YP_003986468.1 )

bacitracin ABC transporter ATP-binding protein

NC_014644
(Gardnerella vaginalis ATCC 14019)

1e-57

68) bcrA
( YP_005837534.1 )

bacitracin ABC transporter ATP-binding protein

NC_017456
(Gardnerella vaginalis HMP9231)

1e-57

69) RO1_37830
( YP_007779794.1 )

ABC-type multidrug transport system, ATPase component

NC_021012
(Roseburia intestinalis XB6B4)

1e-57

70) CC1_30250
( YP_007771003.1 )

ABC-type multidrug transport system, ATPase component

NC_021009
(Coprococcus catus GD/7)

6e-57

71) mrsF
( YP_005495317.1 )

multidrug ABC transporter ATPase

NC_017138
(Bacillus megaterium WSH-002)

7e-57

72) Aeqsu_3151
( YP_006419601.1 )

multidrug ABC transporter ATPase

NC_018013
(Aequorivita sublithincola DSM 14238)

9e-57

73) bcrA
( YP_003474516.1 )

bacitracin transport ATP-binding protein BcrA

NC_013895
(Clostridiales genomosp. UPII9-5)

1e-56

74) Halhy_3635
( YP_004448360.1 )

sulfate-transporting ATPase

NC_015510
(Haliscomenobacter hydrossis DSM 1100)

2e-56

75) SZO_07680
( YP_002744305.1 )

lantibiotic ABC transporter

NC_012470
(Streptococcus equi H70)

2e-56

76) Blon_1042
( YP_002322512.1 )

ABC transporter

NC_011593
(Bifidobacterium longum JCM 1222)

5e-56

77) BLIJ_1066
( YP_005584824.1 )

ABC transporter ATP-binding protein

NC_017219
(Bifidobacterium longum JCM 1222)

5e-56

78) BLJ_1119
( YP_003661405.1 )

ABC transporter ATP-binding protein

NC_014169
(Bifidobacterium longum JDM301)

5e-56

79) bcrA1
( YP_006327593.1 )

bacitracin ABC transporter ATP-binding protein

NC_017912
(Bacillus amyloliquefaciens Y2)

6e-56

80) bcrA1
( YP_005420075.1 )

spermidine/putrescine import ATP-binding protein potA

NC_017061
(Bacillus amyloliquefaciens YAU B9601-Y2)

6e-56

81) HMPREF9228_0759
( YP_005582629.1 )

bacitracin ABC transporter ATP-binding protein

NC_017218
(Bifidobacterium breve ACS-071-V-Sch8b)

8e-56

82) bcrA
( YP_001383549.1 )

bacitracin ABC transporter ATP-binding protein

NC_009697
(Clostridium botulinum ATCC 19397)

2e-55

83) CBO1188
( YP_001253713.1 )

bacitracin ABC transporter ATP-binding protein BcrA

NC_009495
(Clostridium botulinum ATCC 3502)

2e-55

84) HMPREF0573_10442
( YP_003718255.1 )

putative bacitracin ABC transporter ATP-binding protein

NC_014246
(Mobiluncus curtisii ATCC 43063)

2e-55

85) H04402_01258
( YP_005677812.1 )

bacitracin transport ATP-binding protein bcrA

NC_017299
(Clostridium botulinum H04402 065)

4e-55

86) bcrA
( YP_001387098.1 )

bacitracin ABC transporter ATP-binding protein BcrA

NC_009698
(Clostridium botulinum Hall)

5e-55

87) bcrA
( YP_001786575.1 )

bacitracin ABC transporter ATP-binding protein BcrA

NC_010520
(Clostridium botulinum Loch Maree)

7e-55

88) Slin_2202
( YP_003387023.1 )

ABC transporter

NC_013730
(Spirosoma linguale DSM 74)

7e-55

89) bcrA
( YP_004322112.1 )

bacitracin ABC transporter ATP-binding protein BcrA

NC_015278
(Aerococcus urinae ACS-120-V-Col10a)

9e-55

90) bcrA
( YP_002803547.1 )

bacitracin ABC transporter ATP-binding protein BcrA

NC_012563
(Clostridium botulinum Kyoto)

1e-54

91) bcrA
( YP_002862027.1 )

bacitracin ABC transporter ATP-binding protein BcrA

NC_012658
(Clostridium botulinum 657)

2e-54

92) Snas_0812
( YP_003509617.1 )

ABC transporter-like protein

NC_013947
(Stackebrandtia nassauensis DSM 44728)

2e-54

93) bcrA
( YP_001680227.1 )

bacitracin abc transporter

NC_010337
(Heliobacterium modesticaldum Ice1)

6e-54

94) bcrA
( YP_005674197.1 )

bacitracin ABC transporter ATP-binding protein

NC_017297
(Clostridium botulinum 230613)

8e-54

95) bcrA
( YP_001390538.1 )

bacitracin ABC transporter ATP-binding protein

NC_009699
(Clostridium botulinum Langeland)

8e-54

96) mcdF
( YP_005094995.1 )

putative peptide antibiotic resistance ABC transporter

NC_016749
(Streptococcus macedonicus ACA-DC 198)

2e-53

97) CA_C0288
( NP_346929.1 )

ABC transporter ATP-binding protein

NC_003030
(Clostridium acetobutylicum ATCC 824)

3e-53

98) bcrA
( YP_004634947.1 )

ABC transporter ATP-binding protein

NC_015687
(Clostridium acetobutylicum DSM 1731)

3e-53

99) CEA_G0295
( YP_005669431.1 )

ABC transporter ATP-binding protein

NC_017295
(Clostridium acetobutylicum EA 2018)

3e-53

100) SSU05_0894
( YP_001198260.1 )

multidrug ABC transporter ATPase

NC_009442
(Streptococcus suis 05ZYH33)

8e-53

101) SSUA7_0828
( YP_006084496.1 )

multidrug ABC transporter ATPase

NC_017622
(Streptococcus suis A7)

8e-53

102) SSUBM407_1013
( YP_003028755.1 )

lantibiotic transport ATP-binding protein

NC_012926
(Streptococcus suis BM407)

8e-53

103) SSGZ1_0860
( YP_006074259.1 )

ABC transporter

NC_017617
(Streptococcus suis GZ1)

8e-53

104) SSUJS14_0962
( YP_006076310.1 )

multidrug ABC transporter ATPase

NC_017618
(Streptococcus suis JS14)

8e-53

105) SSU0835
( YP_003026713.1 )

lantibiotic transport ATP-binding protein

NC_012925
(Streptococcus suis P1/7)

8e-53

106) YYK_03945
( YP_006649706.1 )

multidrug ABC transporter ATPase

NC_018526
(Streptococcus suis S735)

8e-53

107) NJAUSS_0917
( YP_007570868.1 )

ScnF

NC_020526
(Streptococcus suis SC070731)

8e-53

108) SSUSC84_0797
( YP_003024811.1 )

lantibiotic transport ATP-binding protein

NC_012924
(Streptococcus suis SC84)

8e-53

109) SSU12_0835
( YP_006078268.1 )

multidrug ABC transporter ATPase

NC_017619
(Streptococcus suis SS12)

8e-53

110) bcrA
( YP_008078707.1 )

bacitracin transporter ATP-binding protein BcrA

NC_021362
(Bacillus licheniformis 9945A)

1e-52

111) CLJU_c06490
( YP_003778827.1 )

ABC transporter ATPase

NC_014328
(Clostridium ljungdahlii ATCC 49587)

2e-52

112) bcrA
( YP_001780813.1 )

bacitracin ABC transporter ATP-binding protein BcrA

NC_010516
(Clostridium botulinum Okra)

3e-52

113) CD630_06450
( YP_001087120.1 )

ABC transporter lantibiotic/multidrug-family ATP-binding protein

NC_009089
(Clostridium difficile 630)

3e-52

114) BCK_27648
( YP_006601539.1 )

ABC transporter ATPase

NC_018499
(Bacillus cereus FRI-35)

3e-52

115) Hore_04730
( YP_002508226.1 )

ABC transporter-like protein

NC_011899
(Halothermothrix orenii H 168)

4e-52

116) CXIVA_08040
( YP_004707873.1 )

hypothetical protein

NC_015737
(Clostridium sp. SY8519)

4e-52

117) Bcer98_0262
( YP_001373621.1 )

ABC transporter-like protein

NC_009674
(Bacillus cytotoxicus NVH 391-98)

7e-52

118) scnF
( NP_722130.1 )

bacteriocin component ScnF-like protein

NC_004350
(Streptococcus mutans UA159)

1e-51

119) Apre_0642
( YP_003152402.1 )

ABC transporter-like protein

NC_013171
(Anaerococcus prevotii DSM 20548)

1e-51

120) CD196_0585
( YP_003213624.1 )

lantibiotic ABC transporter ATP-binding protein

NC_013315
(Clostridium difficile CD196)

1e-51

121) CDR20291_0567
( YP_003217071.1 )

lantibiotic ABC transporter ATP-binding protein

NC_013316
(Clostridium difficile R20291)

1e-51

122) Kfla_4303
( YP_003382137.1 )

ABC transporter

NC_013729
(Kribbella flavida DSM 17836)

1e-51

123) sivF
( YP_004727500.1 )

sal9 lantibiotic transport ATP-binding protein

NC_015760
(Streptococcus salivarius CCHSS3)

2e-51

124) CLJU_c22920
( YP_003780452.1 )

ABC transporter ATP-binding protein

NC_014328
(Clostridium ljungdahlii ATCC 49587)

1e-51

125) scnF
( YP_003484246.1 )

hypothetical protein

NC_013928
(Streptococcus mutans NN2025)

2e-51

126) CKL_0964
( YP_001394358.1 )

ABC transporter ATPase

NC_009706
(Clostridium kluyveri DSM 555)

2e-51

127) CKR_0872
( YP_002471337.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

2e-51

128) CbC4_6015
( YP_004385812.1 )

ABC transporter-like protein

NC_015418
(Clostridium botulinum BKT015925)

3e-50

129) AORI_1300
( YP_008010292.1 )

antibiotic transport system ATP-binding protein

NC_021252
(Amycolatopsis orientalis HCCB10007)

4e-50

130) Ccel_1161
( YP_002505498.1 )

ABC transporter

NC_011898
(Clostridium cellulolyticum H10)

5e-50

131) spaF
( YP_005960128.1 )

spermidine/putrescine import ATP-binding protein potA

NC_017542
(Paenibacillus polymyxa M1)

4e-50

132) PPSC2_c2767
( YP_003946974.1 )

multidrug ABC transporter ATPase

NC_014622
(Paenibacillus polymyxa SC2)

4e-50

133) Clo1100_2896
( YP_005148853.1 )

multidrug ABC transporter ATPase

NC_016791
(Clostridium sp. BNL1100)

6e-50

134) GYMC52_0293
( YP_004130942.1 )

ABC transporter

NC_014915
(Geobacillus sp. Y412MC52)

1e-49

135) GYMC61_1171
( YP_003252307.1 )

ABC transporter

NC_013411
(Geobacillus sp. Y412MC61)

1e-49

136) PPSC2_c5225
( YP_003949403.1 )

ABC transporter ATPase

NC_014622
(Paenibacillus polymyxa SC2)

1e-49

137) potA3
( YP_008050426.1 )

Spermidine/putrescine import ATP-binding protein potA

NC_017542
(Paenibacillus polymyxa M1)

2e-49

138) GC56T3_0348
( YP_003669986.1 )

ABC transporter

NC_014206
(Geobacillus sp. C56-T3)

6e-50

139) ABC1210
( YP_174709.1 )

lantibiotic ABC transporter ATP-binding protein

NC_006582
(Bacillus clausii KSM-K16)

7e-50

140) Clopa_1714
( YP_007940312.1 )

ABC-type multidrug transport system, ATPase component

NC_021182
(Clostridium pasteurianum BC1)

2e-49

141) GK0312
( YP_146165.1 )

lantibiotic ABC transporter ATP-binding protein

NC_006510
(Geobacillus kaustophilus HTA426)

4e-49

142) GTCCBUS3UF5_3960
( YP_004980822.1 )

ABC transporter

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

4e-49

143) SSU98_0898
( YP_001200456.1 )

ScnF

NC_009443
(Streptococcus suis 98HAH33)

4e-49

144) Thexy_0985
( YP_004470691.1 )

lantibiotic protection ABC transporter ATP-binding subunit

NC_015555
(Thermoanaerobacterium xylanolyticum LX-11)

5e-49

145) CA_C2040
( NP_348659.1 )

ABC transporter ATPase component

NC_003030
(Clostridium acetobutylicum ATCC 824)

5e-49

146) SMB_G2072
( YP_004636705.1 )

ABC transporter ATPase

NC_015687
(Clostridium acetobutylicum DSM 1731)

5e-49

147) CEA_G2054
( YP_005671186.1 )

ABC transporter ATPase

NC_017295
(Clostridium acetobutylicum EA 2018)

5e-49

148) BcerKBAB4_0264
( YP_001643158.1 )

ABC transporter

NC_010184
(Bacillus weihenstephanensis KBAB4)

7e-49

149) PPE_04708
( YP_003873005.1 )

bacitracin transport ATP-binding protein bcrA

NC_014483
(Paenibacillus polymyxa E681)

1e-48

150) Tthe_1886
( YP_003852459.1 )

ABC transporter

NC_014410
(Thermoanaerobacterium thermosaccharolyticum DSM 571)

7e-49

151) EUBELI_01662
( YP_002931100.1 )

antibiotic transport system ATP-binding protein

NC_012778
(Eubacterium eligens ATCC 27750)

9e-49

152) spaF
( YP_001124403.1 )

ABC transporter ATP-binding protein

NC_009328
(Geobacillus thermodenitrificans NG80-2)

9e-49

153) BaLi_c03310
( YP_008076482.1 )

lantibiotic protection ABC exporter ATP-binding protein

NC_021362
(Bacillus licheniformis 9945A)

1e-48

154) spaF
( YP_006711744.1 )

lantibiotic ABC transporter ATP-binding protein SpaF

NC_006322
(Bacillus licheniformis DSM 13)

1e-48

155) spaF
( YP_077556.1 )

ABC transporter

NC_006270
(Bacillus licheniformis DSM 13)

1e-48

156) CK5_35820
( YP_007806730.1 )

ABC-type multidrug transport system, ATPase component

NC_021022
([Ruminococcus] obeum A2-162)

1e-48

157) bcrA
( YP_081867.1 )

bacitracin ABC transporter ATP-binding protein

NC_006274
(Bacillus cereus E33L)

2e-48

158) ELI_2593
( YP_003960538.1 )

putative ABC transporter

NC_014624
(Eubacterium limosum KIST612)

2e-48

159) EUBREC_0087
( YP_002936026.1 )

bacteriocin ABC transporter, ATP-binding protein, putative

NC_012781
(Eubacterium rectale ATCC 33656)

3e-48

160) ERE_02670
( YP_007841196.1 )

ABC-type multidrug transport system, ATPase component

NC_021044
(Eubacterium rectale M104/1)

3e-48

161) Theco_0444
( YP_007211662.1 )

gallidermin-class lantibiotic protection ABC transporter ATP-binding subunit

NC_019897
(Thermobacillus composti KWC4)

3e-48

162) K710_0263
( YP_008056005.1 )

mutacin ABC transporter, ATP-binding protein MutF

NC_021314
(Streptococcus iniae SF1)

3e-48

163) bcrA2
( YP_007372516.1 )

bacitracin transport ATP-binding protein BcrA

NC_020134
(Clostridium stercorarium DSM 8532)

5e-48

164) Clst_0873
( YP_007678965.1 )

ABC transporter ATPase subunit

NC_020887
(Clostridium stercorarium DSM 8532)

5e-48

165) Aaci_0643
( YP_003184080.1 )

ABC transporter-like protein

NC_013205
(Alicyclobacillus acidocaldarius DSM 446)

5e-48

166) BBR47_36530
( YP_002773134.1 )

ABC transporter ATP-binding protein

NC_012491
(Brevibacillus brevis NBRC 100599)

5e-48

167) BMB171_C0253
( YP_003662791.1 )

bacitracin transporter ATP-binding protein BcrA

NC_014171
(Bacillus thuringiensis BMB171)

1e-47

168) nfa4200
( YP_116626.1 )

ABC transporter ATP-binding protein

NC_006361
(Nocardia farcinica IFM 10152)

1e-47

169) ycbN
( YP_008076464.1 )

putative ABC transporter ATP-binding protein YcbN

NC_021362
(Bacillus licheniformis 9945A)

1e-47

170) Tsac_2267
( YP_006392870.1 )

lantibiotic protection ABC transporter ATP-binding subunit

NC_017992
(Thermoanaerobacterium saccharolyticum JW/SL-YS485)

4e-48

171) Thethe_01874
( YP_007299184.1 )

gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit

NC_019970
(Thermoanaerobacterium thermosaccharolyticum M0795)

4e-48

172) RTO_31510
( YP_007788047.1 )

ABC-type multidrug transport system, ATPase component

NC_021015
([Ruminococcus] torques L2-14)

5e-48

173) BAA_0335
( YP_002864903.1 )

putative bacitracin ABC transporter, ATP-binding protein

NC_012659
(Bacillus anthracis A0248)

9e-48

174) BA_0285
( NP_842835.1 )

bacitracin ABC transporter ATP-binding protein

NC_003997
(Bacillus anthracis Ames)

9e-48

175) GBAA_0285
( YP_016895.1 )

bacitracin ABC transporter ATP-binding protein

NC_007530
(Bacillus anthracis Ames Ancestor)

9e-48

176) BAMEG_0338
( YP_002812959.1 )

putative bacitracin ABC transporter, ATP-binding protein

NC_012581
(Bacillus anthracis CDC 684)

9e-48

177) BAS0271
( YP_026552.1 )

bacitracin ABC transporter ATP-binding protein

NC_005945
(Bacillus anthracis Sterne)

9e-48

178) BCAH820_0315
( YP_002449309.1 )

putative bacitracin ABC transporter ATP-binding protein

NC_011773
(Bacillus cereus AH820)

9e-48

179) CK1_37030
( YP_007785077.1 )

ABC-type multidrug transport system, ATPase component

NC_021014
(Ruminococcus sp. SR1/5)

1e-47

180) Clocel_4204
( YP_003845629.1 )

ABC transporter

NC_014393
(Clostridium cellulovorans 743B)

1e-47

181) HD73_0316
( YP_007419419.1 )

ABC transporter-related protein

NC_020238
(Bacillus cereus HD73)

2e-47

182) BCB4264_A0314
( YP_002365104.1 )

bacitracin ABC transporter ATP-binding protein

NC_011725
(Bacillus cereus B4264)

2e-47

183) BCG9842_B5000
( YP_002443801.1 )

bacitracin ABC transporter ATP-binding protein

NC_011772
(Bacillus cereus G9842)

2e-47

184) BTF1_27475
( YP_006613575.1 )

bacitracin ABC transporter ATP-binding protein

NC_018508
(Bacillus thuringiensis HD-789)

2e-47

185) BCA_0347
( YP_002747699.1 )

putative bacitracin ABC transporter ATP-binding protein

NC_012472
(Bacillus cereus 03BB102)

2e-47

186) bcrA
( YP_893185.1 )

bacitracin ABC transporter ATP-binding protein

NC_008600
(Bacillus thuringiensis Al Hakam)

2e-47

187) Mmar10_1823
( YP_757053.1 )

ABC transporter-like protein

NC_008347
(Maricaulis maris MCS10)

2e-47

188) Bresu_1426
( YP_003818361.1 )

ABC transporter

NC_014375
(Brevundimonas subvibrioides ATCC 15264)

2e-47

189) Cseg_0642
( YP_003591772.1 )

ABC transporter

NC_014100
(Caulobacter segnis ATCC 21756)

2e-47

190) CKL_1287
( YP_001394677.1 )

ABC transporter ATPase

NC_009706
(Clostridium kluyveri DSM 555)

2e-47

191) CKR_1183
( YP_002471648.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

2e-47

192) mutF
( NP_721082.1 )

ABC transporter ATP-binding protein MutF

NC_004350
(Streptococcus mutans UA159)

2e-47

193) FMG_1408
( YP_001692716.1 )

ABC transporter ATP-binding protein

NC_010376
(Finegoldia magna ATCC 29328)

2e-47

194) spaF
( YP_001086952.1 )

ABC transporter lantibiotic/multidrug-family ATP-binding protein

NC_009089
(Clostridium difficile 630)

3e-47

195) CC1_02400
( YP_007768601.1 )

ABC-type multidrug transport system, ATPase component

NC_021009
(Coprococcus catus GD/7)

3e-47

196) ELI_2996
( YP_003960928.1 )

bacitracin transport ATP-binding protein BcrA

NC_014624
(Eubacterium limosum KIST612)

3e-47

197) GPA_18440
( YP_007802665.1 )

ABC-type multidrug transport system, ATPase component

NC_021021
(Gordonibacter pamelaeae 7-10-1-bT)

3e-47

198) bcrA
( YP_034605.1 )

bacitracin ABC transporter ATP-binding protein

NC_005957
(Bacillus thuringiensis 97-27)

3e-47

199) ycbN
( YP_006711726.1 )

ABC transporter ATP-binding protein YcbN

NC_006322
(Bacillus licheniformis DSM 13)

3e-47

200) ycbN
( YP_077537.1 )

ABC transporter

NC_006270
(Bacillus licheniformis DSM 13)

3e-47

201) MY9_0259
( YP_006230055.1 )

ABC transporter ATP-binding protein

NC_017743
(Bacillus sp. JS)

3e-47

202) BSn5_12855
( YP_004206212.1 )

bacitracin ABC transporter ATP-binding protein

NC_014976
(Bacillus subtilis BSn5)

3e-47

203) CBF_2327
( YP_005675192.1 )

antibiotic ABC transporter ATP-binding protein

NC_017297
(Clostridium botulinum 230613)

4e-47

204) H04402_02386
( YP_005678928.1 )

bacitracin transport ATP-binding protein bcrA

NC_017299
(Clostridium botulinum H04402 065)

4e-47

205) CLI_2337
( YP_001391586.1 )

antibiotic ABC transporter ATP-binding protein

NC_009699
(Clostridium botulinum Langeland)

4e-47

206) CLJ_B2593
( YP_002863356.1 )

antibiotic ABC transporter ATP-binding protein

NC_012658
(Clostridium botulinum 657)

5e-47

207) CLD_2289
( YP_001781898.1 )

antibiotic ABC transporter ATP-binding protein

NC_010516
(Clostridium botulinum Okra)

5e-47

208) Cbei_2669
( YP_001309778.1 )

ABC transporter

NC_009617
(Clostridium beijerinckii NCIMB 8052)

1e-46

209) Cbei_3325
( YP_001310408.1 )

ABC transporter

NC_009617
(Clostridium beijerinckii NCIMB 8052)

3e-47

210) RO1_33960
( YP_007779464.1 )

ABC-type multidrug transport system, ATPase component

NC_021012
(Roseburia intestinalis XB6B4)

3e-47

211) CK5_05640
( YP_007804115.1 )

ABC-type multidrug transport system, ATPase component

NC_021022
([Ruminococcus] obeum A2-162)

4e-47

212) spaF
( YP_003213480.1 )

lantibiotic ABC transporter ATP-binding protein

NC_013315
(Clostridium difficile CD196)

5e-47

213) spaF
( YP_003216927.1 )

lantibiotic ABC transporter ATP-binding protein

NC_013316
(Clostridium difficile R20291)

5e-47

214) Elen_1167
( YP_003181526.1 )

ABC transporter-like protein

NC_013204
(Eggerthella lenta DSM 2243)

5e-47

215) CLM_2591
( YP_002804745.1 )

antibiotic ABC transporter ATP-binding protein

NC_012563
(Clostridium botulinum Kyoto)

6e-47

216) CLK_1733
( YP_001787668.1 )

antibiotic ABC transporter ATP-binding protein

NC_010520
(Clostridium botulinum Loch Maree)

6e-47

217) KNP414_07860
( YP_004646215.1 )

ABC transporter ATP-binding protein

NC_015690
(Paenibacillus mucilaginosus KNP414)

6e-47

218) ROI_06030
( YP_007830910.1 )

ABC-type multidrug transport system, ATPase component

NC_021040
(Roseburia intestinalis M50/1)

1e-46

219) CLJU_c09140
( YP_003779084.1 )

ABC transporter ATPase

NC_014328
(Clostridium ljungdahlii ATCC 49587)

1e-46

220) Smon_0454
( YP_003305812.1 )

ABC transporter

NC_013515
(Streptobacillus moniliformis DSM 12112)

1e-46

221) LM5578_0836
( YP_003412952.1 )

hypothetical protein

NC_013766
(Listeria monocytogenes 08-5578)

1e-46

222) LM5923_0791
( YP_003415997.1 )

hypothetical protein

NC_013768
(Listeria monocytogenes 08-5923)

1e-46

223) M642_01405
( YP_008271152.1 )

ABC transporter ATP-binding protein

NC_021823
(Listeria monocytogenes C1-387)

1e-46

224) LMLG_1591
( YP_005970578.1 )

bacitracin transport ATP-binding protein BcrA

NC_017547
(Listeria monocytogenes Finland 1988)

1e-46

225) LMHCC_1872
( YP_002350827.1 )

bacitracin ABC transporter ATP-binding protein

NC_011660
(Listeria monocytogenes HCC23)

1e-46

226) lmo4a_0768
( YP_005925759.1 )

ABC transporter ATP-binding protein

NC_017529
(Listeria monocytogenes L99)

1e-46

227) yadG
( YP_005946850.1 )

putative efflux ABC transporter, ATP-binding protein

NC_017537
(Listeria monocytogenes M7)

1e-46

228) HPL003_14420
( YP_005075858.1 )

bacitracin ABC transporter ATP-binding protein

NC_016641
(Paenibacillus terrae HPL-003)

1e-46

229) Achl_0607
( YP_002486694.1 )

ABC transporter

NC_011886
(Arthrobacter chlorophenolicus A6)

1e-46

230) CLB_2227
( YP_001384538.1 )

antibiotic ABC transporter ATP-binding protein

NC_009697
(Clostridium botulinum ATCC 19397)

2e-46

231) CBO2283
( YP_001254775.1 )

antibiotic ABC transporter ATP-binding protein

NC_009495
(Clostridium botulinum ATCC 3502)

2e-46

232) CLC_2210
( YP_001388054.1 )

antibiotic ABC transporter ATP-binding protein

NC_009698
(Clostridium botulinum Hall)

2e-46

233) CLJU_c37410
( YP_003781869.1 )

ABC transporter ATPase

NC_014328
(Clostridium ljungdahlii ATCC 49587)

6e-47

234) Clocl_0769
( YP_005045393.1 )

gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit

NC_016627
(Clostridium clariflavum DSM 19732)

9e-47

235) PM3016_7378
( YP_005317095.1 )

ABC transporter ATP-binding protein

NC_016935
(Paenibacillus mucilaginosus 3016)

9e-47

236) spaF
( YP_005131856.1 )

phosphate import ATP-binding protein pstB

NC_016784
(Bacillus amyloliquefaciens CAU B946)

2e-46

237) KSO_003630
( YP_007444104.1 )

phosphate import ATP-binding protein pstB

NC_020272
(Bacillus amyloliquefaciens IT-45)

2e-46

238) spaF
( YP_008414212.1 )

SpaF

NC_022075
(Bacillus amyloliquefaciens UCMB-5033)

2e-46

239) spaF
( YP_008422425.1 )

SpaF

NC_022081
(Bacillus amyloliquefaciens UCMB5113)

2e-46

240) LMRG_00444
( YP_005961888.1 )

antibiotic transport system ATP-binding protein

NC_017544
(Listeria monocytogenes 10403S)

2e-46

241) lmo0756
( NP_464283.1 )

hypothetical protein

NC_003210
(Listeria monocytogenes EGD-e)

2e-46

242) LMKG_01121
( YP_005967674.1 )

bacitracin transport ATP-binding protein BcrA

NC_017546
(Listeria monocytogenes FSL R2-561)

2e-46

243) M639_13875
( YP_008297329.1 )

ABC transporter ATP-binding protein

NC_021837
(Listeria monocytogenes J2-031)

2e-46

244) LMOSLCC2372_0766
( YP_006684093.1 )

ABC transporter ATP-binding protein

NC_018588
(Listeria monocytogenes SLCC2372)

2e-46

245) LMOSLCC2479_0764
( YP_006687027.1 )

ABC transporter ATP-binding protein

NC_018589
(Listeria monocytogenes SLCC2479)

2e-46

246) LMOSLCC5850_0756
( YP_006695583.1 )

ABC transporter ATP-binding protein

NC_018592
(Listeria monocytogenes SLCC5850)

2e-46

247) LMOSLCC7179_0733
( YP_006698426.1 )

ABC transporter ATP-binding protein

NC_018593
(Listeria monocytogenes SLCC7179)

2e-46

248) B2K_37235
( YP_006194045.1 )

ABC transporter ATP-binding protein

NC_017672
(Paenibacillus mucilaginosus K02)

2e-46

249) Acel_0929
( YP_872688.1 )

ABC transporter-like protein

NC_008578
(Acidothermus cellulolyticus 11B)

3e-46

250) CLD_1169
( YP_001782976.1 )

bacitracin ABC transporter ATP-binding protein

NC_010516
(Clostridium botulinum Okra)

3e-46

251) PPE_01211
( YP_003869597.1 )

ABC transporter ATP-binding protein

NC_014483
(Paenibacillus polymyxa E681)

3e-46

252) ycbN
( NP_388139.2 )

ABC transporter ATP-binding protein

NC_000964
(Bacillus subtilis 168)

3e-46

253) ycbN
( YP_007532182.1 )

putative ABC efflux transporter ATP-binding protein YcbN

NC_020507
(Bacillus subtilis 6051-HGW)

3e-46

254) A7A1_1942
( YP_007211000.1 )

ABC transporter ATP-binding protein YcbN

NC_019896
(Bacillus subtilis BSP1)

3e-46

255) ycbN
( YP_006628441.1 )

ABC efflux transporter ATP-binding protein

NC_018520
(Bacillus subtilis QB928)

3e-46

256) CcmA
( YP_004711693.1 )

multidrug ABC transporter ATPase

NC_015738
(Eggerthella sp. YY7918)

2e-46

257) srtF
( YP_007498686.1 )

Lantibiotic transport ATP-binding protein SrtF

NC_020410
(Bacillus amyloliquefaciens UCMB5036)

4e-46

258) bcrA
( NP_782390.1 )

bacitracin transport ATP-binding protein bcrA

NC_004557
(Clostridium tetani E88)

4e-46

259) bcrA5
( YP_005958829.1 )

spermidine/putrescine import ATP-binding protein potA

NC_017542
(Paenibacillus polymyxa M1)

4e-46

260) PPSC2_c1300
( YP_003945521.1 )

multidrug ABC transporter ATPase

NC_014622
(Paenibacillus polymyxa SC2)

4e-46

261) BATR1942_19935
( YP_003975833.1 )

bacitracin ABC transporter ATP-binding protein

NC_014639
(Bacillus atrophaeus 1942)

4e-46

262) B938_15885
( YP_007187855.1 )

phosphate import ATP-binding protein pstB

NC_019842
(Bacillus amyloliquefaciens AS43.3)

5e-46

263) GYMC10_3489
( YP_003243533.1 )

ABC transporter-like protein

NC_013406
(Paenibacillus sp. Y412MC10)

5e-46

264) B737_6484
( YP_008462816.1 )

multidrug ABC transporter ATPase

NC_022116
(Amycolatopsis mediterranei RB)

5e-46

265) RAM_33770
( YP_005534684.1 )

multidrug ABC transporter ATPase

NC_017186
(Amycolatopsis mediterranei S699)

5e-46

266) AMES_6484
( YP_006552965.1 )

multidrug ABC transporter ATPase

NC_018266
(Amycolatopsis mediterranei S699)

5e-46

267) AMED_6582
( YP_003768711.1 )

multidrug ABC transporter ATPase

NC_014318
(Amycolatopsis mediterranei U32)

5e-46

268) Ethha_0602
( YP_004090907.1 )

ABC transporter

NC_014828
(Ethanoligenens harbinense YUAN-3)

5e-46

269) MS7_0057
( YP_005756524.1 )

ABC transporter family protein

NC_017351
(Staphylococcus aureus 11819-97)

7e-46

270) USA300HOU_pUSA300HOUMR0024
( YP_001569066.1 )

bacitracin ABC ATP binding cassette transporter, ABC protein

NC_010063
(Staphylococcus aureus TCH1516)

7e-46

271) ELI_2278
( YP_003960224.1 )

bacitracin transport ATP-binding protein BcrA

NC_014624
(Eubacterium limosum KIST612)

8e-46

272) lwe0717
( YP_848918.1 )

ABC transporter ATP-binding protein

NC_008555
(Listeria welshimeri SLCC5334)

1e-45

273) VAB18032_21160
( YP_004405932.1 )

ABC transporter

NC_015434
(Verrucosispora maris AB-18-032)

1e-45

274) spaF
( YP_001422663.1 )

SpaF

NC_009725
(Bacillus amyloliquefaciens FZB42)

5e-46

275) SMUGS5_02880
( YP_006489895.1 )

ABC transporter ATP-binding protein MutF

NC_018089
(Streptococcus mutans GS-5)

6e-46

276) GWCH70_0243
( YP_002948439.1 )

ABC transporter

NC_012793
(Geobacillus sp. WCH70)

8e-46

277) spaF
( YP_005547266.1 )

antibiotic transport system ATP-binding protein

NC_017190
(Bacillus amyloliquefaciens LL3)

8e-46

278) Awo_c01530
( YP_005267851.1 )

antibiotic ABC transport system ATP-binding protein

NC_016894
(Acetobacterium woodii DSM 1030)

9e-46

279) spaF
( YP_003921823.1 )

SpaF

NC_014551
(Bacillus amyloliquefaciens DSM 7)

1e-45

280) spaF
( YP_005543072.1 )

SpaF

NC_017188
(Bacillus amyloliquefaciens TA208)

2e-45

281) spaF
( YP_005551460.1 )

lantibiotic transporter (ATP-binding protein)

NC_017191
(Bacillus amyloliquefaciens XH7)

2e-45

282) lse_0652
( YP_003463891.1 )

ABC transporter ATP-binding protein

NC_013891
(Listeria seeligeri SLCC3954)

2e-45

283) bcrA
( NP_781981.1 )

bacitracin ABC transporter ATP-binding protein

NC_004557
(Clostridium tetani E88)

3e-45

284) CLL_A2211
( YP_001886400.1 )

bacitracin ABC transporter ATP-binding protein

NC_010674
(Clostridium botulinum Eklund 17B)

2e-45

285) Spico_1203
( YP_004411797.1 )

polyamine-transporting ATPase

NC_015436
(Sphaerochaeta coccoides DSM 17374)

2e-45

286) GY4MC1_3547
( YP_003990802.1 )

ABC transporter

NC_014650
(Geobacillus sp. Y4.1MC1)

3e-45

287) Geoth_3656
( YP_004589571.1 )

sulfate-transporting ATPase

NC_015660
(Geobacillus thermoglucosidasius C56-YS93)

3e-45

288) LMOG_01979
( YP_005964749.1 )

ABC transporter ATP-binding protein

NC_017545
(Listeria monocytogenes J0161)

4e-45

289) HD73_5813
( YP_007424911.1 )

hypothetical protein

NC_020238
(Bacillus cereus HD73)

4e-45

290) CLOST_2472
( YP_003937492.1 )

putative bacitracin ABC transporter, ATP-binding protein

NC_014614
(Clostridium sticklandii DSM 519)

5e-45

291) lin0750
( NP_470092.1 )

hypothetical protein

NC_003212
(Listeria innocua Clip11262)

5e-45

292) LMOATCC19117_0780
( YP_006672581.1 )

ABC transporter ATP-binding protein

NC_018584
(Listeria monocytogenes ATCC 19117)

1e-44

293) LM220_18390
( YP_008288965.1 )

ABC transporter ATP-binding protein

NC_021830
(Listeria monocytogenes J1-220)

1e-44

294) MUO_04060
( YP_006205012.1 )

ABC transporter ATP-binding protein

NC_017728
(Listeria monocytogenes 07PF0776)

1e-44

295) Lm4b_00772
( YP_002757481.1 )

ABC transporter ATP-binding protein

NC_012488
(Listeria monocytogenes Clip81459)

1e-44

296) M640_02685
( YP_008301089.1 )

ABC transporter ATP-binding protein

NC_021839
(Listeria monocytogenes J1776)

1e-44

297) LM1816_00680
( YP_008285971.1 )

ABC transporter ATP-binding protein

NC_021829
(Listeria monocytogenes J1816)

1e-44

298) M644_12250
( YP_008285034.1 )

ABC transporter ATP-binding protein

NC_021827
(Listeria monocytogenes J1817)

1e-44

299) M645_03215
( YP_008304081.1 )

ABC transporter ATP-binding protein

NC_021840
(Listeria monocytogenes J1926)

1e-44

300) LMOL312_0756
( YP_006753885.1 )

ABC transporter, ATP-binding protein

NC_018642
(Listeria monocytogenes L312)

1e-44

301) M643_14080
( YP_008282318.1 )

ABC transporter ATP-binding protein

NC_021826
(Listeria monocytogenes N1-011A)

1e-44

302) M641_10060
( YP_008299515.1 )

ABC transporter ATP-binding protein

NC_021838
(Listeria monocytogenes R2-502)

1e-44

303) LMOSLCC2482_0800
( YP_006692753.1 )

ABC transporter ATP-binding protein

NC_018591
(Listeria monocytogenes SLCC2482)

1e-44

304) LMOSLCC2755_0757
( YP_006681207.1 )

ABC transporter ATP-binding protein

NC_018587
(Listeria monocytogenes SLCC2755)

1e-44

305) BAST_1589
( YP_006865724.1 )

ABC transporter, ATP binding protein

NC_018720
(Bifidobacterium asteroides PRL2011)

5e-45

306) BCAH187_A3812
( YP_002339754.1 )

putative bacteriocin ABC transporter ATP-binding protein

NC_011658
(Bacillus cereus AH187)

6e-45

307) BCN_3593
( YP_005106126.1 )

bacteriocin ABC transporter ATP-binding protein

NC_016771
(Bacillus cereus NC7401)

6e-45

308) Clocel_1510
( YP_003843023.1 )

ABC transporter

NC_014393
(Clostridium cellulovorans 743B)

6e-45

309) BCE_5529
( NP_981821.1 )

ABC transporter, ATP-binding protein

NC_003909
(Bacillus cereus ATCC 10987)

6e-45

310) BCK_14485
( YP_006596997.1 )

antibiotic ABC transporter ATP-binding protein

NC_018491
(Bacillus cereus FRI-35)

7e-45

311) CbC4_6025
( YP_004385822.1 )

efflux ABC transporter ATP-binding protein

NC_015418
(Clostridium botulinum BKT015925)

1e-44

312) LMOf2365_0780
( YP_013384.1 )

ABC transporter ATP-binding protein

NC_002973
(Listeria monocytogenes F2365)

1e-44

313) M638_06540
( YP_008277954.1 )

ABC transporter ATP-binding protein

NC_021825
(Listeria monocytogenes J2-1091)

1e-44

314) yhcH
( YP_007014354.1 )

Uncharacterized ABC transporter ATP-binding protein YhcH

NC_019556
(Listeria monocytogenes LL195)

1e-44

315) LMOSLCC2378_0776
( YP_006675445.1 )

ABC transporter ATP-binding protein

NC_018585
(Listeria monocytogenes SLCC2378)

1e-44

316) BCAH187_A5579
( YP_002341468.1 )

ABC transporter ATP-binding protein

NC_011658
(Bacillus cereus AH187)

1e-44

317) BCK_08355
( YP_006595780.1 )

ABC transporter ATP-binding protein

NC_018491
(Bacillus cereus FRI-35)

1e-44

318) BCN_5328
( YP_005107861.1 )

ABC transporter ATP-binding protein

NC_016771
(Bacillus cereus NC7401)

1e-44

319) BCQ_5242
( YP_002532931.1 )

ABC transporter ATP-binding protein

NC_011969
(Bacillus cereus Q1)

1e-44

320) Msm_0593
( YP_001273166.1 )

multidrug ABC transporter, ATPase component, CcmA

NC_009515
(Methanobrevibacter smithii ATCC 35061)

2e-44

321) Bcer98_3921
( YP_001377100.1 )

ABC transporter-like protein

NC_009674
(Bacillus cytotoxicus NVH 391-98)

2e-44

322) BCZK5098
( YP_086667.1 )

bacitracin ABC transporter ATP-binding protein

NC_006274
(Bacillus cereus E33L)

2e-44

323) bcrA6
( YP_006930187.1 )

bacitracin transport ATP-binding protein BcrA

NC_018877
(Bacillus thuringiensis Bt407)

2e-44

324) CT43_CH5440
( YP_005575385.1 )

bacitracin transport ATP-binding protein bcrA

NC_017208
(Bacillus thuringiensis CT-43)

2e-44

325) H175_ch5531
( YP_007481988.1 )

ABC transporter, ATP-binding protein

NC_020376
(Bacillus thuringiensis IS5056)

2e-44

326) CLJ_B3637
( YP_002864346.1 )

bacitracin ABC transporter ATP-binding protein

NC_012658
(Clostridium botulinum 657)

2e-44

327) CLB_3409
( YP_001385670.1 )

bacitracin ABC transporter ATP-binding protein

NC_009697
(Clostridium botulinum ATCC 19397)

2e-44

328) CBO3351
( YP_001255833.1 )

bacitracin ABC transporter ATP-binding protein

NC_009495
(Clostridium botulinum ATCC 3502)

2e-44

329) CLC_3296
( YP_001389076.1 )

bacitracin ABC transporter ATP-binding protein

NC_009698
(Clostridium botulinum Hall)

2e-44

330) YBT020_26930
( YP_005569026.1 )

ABC transporter ATP-binding protein

NC_017200
(Bacillus thuringiensis YBT-020)

2e-44

331) CD630_13490
( YP_001087845.1 )

ABC transporter lantibiotic/multidrug-family ATP-binding protein

NC_009089
(Clostridium difficile 630)

9e-45

332) CLJ_B1689
( YP_002862474.1 )

antibiotic ABC transporter ATP-binding protein

NC_012658
(Clostridium botulinum 657)

2e-44

333) CLM_1823
( YP_002804004.1 )

antibiotic ABC transporter ATP-binding protein

NC_012563
(Clostridium botulinum Kyoto)

3e-44

334) CLM_3799
( YP_002805879.1 )

bacitracin ABC transporter ATP-binding protein

NC_012563
(Clostridium botulinum Kyoto)

3e-44

335) Fluta_3064
( YP_004345878.1 )

sulfate-transporting ATPase

NC_015321
(Fluviicola taffensis DSM 16823)

4e-44

336) LMOSLCC2376_0723
( YP_006689921.1 )

ABC transporter ATP-binding protein

NC_018590
(Listeria monocytogenes SLCC2376)

4e-44

337) M637_06425
( YP_008275086.1 )

ABC transporter ATP-binding protein

NC_021824
(Listeria monocytogenes J2-064)

5e-44

338) BCA_5552
( YP_002752762.1 )

ABC transporter ATP-binding protein

NC_012472
(Bacillus cereus 03BB102)

5e-44

339) BCAH820_5495
( YP_002454415.1 )

ABC transporter ATP-binding protein

NC_011773
(Bacillus cereus AH820)

5e-44

340) bcf_27120
( YP_005122030.1 )

ABC transporter ATP-binding protein

NC_016779
(Bacillus cereus F837/76)

5e-44

341) BACI_c37170
( YP_003793468.1 )

ABC transporter ATPase

NC_014335
(Bacillus cereus CI)

4e-44

342) CLB_1602
( YP_001383925.1 )

antibiotic ABC transporter ATP-binding protein

NC_009697
(Clostridium botulinum ATCC 19397)

4e-44

343) CBO1582
( YP_001254089.1 )

antibiotic ABC transporter ATP-binding protein

NC_009495
(Clostridium botulinum ATCC 3502)

4e-44

344) CLC_1612
( YP_001387471.1 )

antibiotic ABC transporter ATP-binding protein

NC_009698
(Clostridium botulinum Hall)

4e-44

345) CLK_1049
( YP_001786991.1 )

antibiotic ABC transporter ATP-binding protein

NC_010520
(Clostridium botulinum Loch Maree)

4e-44

346) CLH_2011
( YP_001921392.1 )

bacitracin transport ATP-binding protein BcrA

NC_010723
(Clostridium botulinum Alaska E43)

5e-44

347) BAA_3928
( YP_002868009.1 )

putative bacteriocin ABC transporter, ATP-binding protein

NC_012659
(Bacillus anthracis A0248)

5e-44

348) BA_3903
( NP_846150.1 )

bacteriocin ABC transporter ATP-binding protein

NC_003997
(Bacillus anthracis Ames)

5e-44

349) GBAA_3903
( YP_020541.1 )

bacteriocin ABC transporter ATP-binding protein

NC_007530
(Bacillus anthracis Ames Ancestor)

5e-44

350) BAMEG_0728
( YP_002813334.1 )

putative bacteriocin ABC transporter, ATP-binding protein

NC_012581
(Bacillus anthracis CDC 684)

5e-44

351) H9401_3717
( YP_006210771.1 )

Bacteriocin ABC transporter, ATP-binding protein

NC_017729
(Bacillus anthracis H9401)

5e-44

352) BAS3616
( YP_029869.1 )

bacteriocin ABC transporter ATP-binding protein

NC_005945
(Bacillus anthracis Sterne)

5e-44

353) CD196_1213
( YP_003214243.1 )

lantibiotic ABC transporter ATP-binding protein

NC_013315
(Clostridium difficile CD196)

5e-44

354) CDR20291_1191
( YP_003217689.1 )

lantibiotic ABC transporter ATP-binding protein

NC_013316
(Clostridium difficile R20291)

5e-44

355) BALH_4901
( YP_897583.1 )

ABC transporter ATP-binding protein

NC_008600
(Bacillus thuringiensis Al Hakam)

5e-44

356) H04402_01651
( YP_005678199.1 )

lantibiotic transport ATP-binding protein srtF

NC_017299
(Clostridium botulinum H04402 065)

6e-44

357) BcerKBAB4_5193
( YP_001647966.1 )

ABC transporter

NC_010184
(Bacillus weihenstephanensis KBAB4)

6e-44

358) Sgly_1236
( YP_004265553.1 )

ABC transporter

NC_015172
(Syntrophobotulus glycolicus DSM 8271)

6e-44

359) BCB4264_A5523
( YP_002370177.1 )

ABC transporter ATP-binding protein

NC_011725
(Bacillus cereus B4264)

6e-44

360) BAA_5677
( YP_002869613.1 )

ABC transporter ATP-binding protein

NC_012659
(Bacillus anthracis A0248)

6e-44

361) BA_5650
( NP_847798.1 )

ABC transporter ATP-binding protein

NC_003997
(Bacillus anthracis Ames)

6e-44

362) GBAA_5650
( YP_052658.1 )

ABC transporter ATP-binding protein

NC_007530
(Bacillus anthracis Ames Ancestor)

6e-44

363) BAMEG_5694
( YP_002818177.1 )

ABC transporter ATP-binding protein

NC_012581
(Bacillus anthracis CDC 684)

6e-44

364) H9401_5391
( YP_006212444.1 )

ABC transporter ATP-binding protein

NC_017729
(Bacillus anthracis H9401)

6e-44

365) BAS5252
( YP_031490.1 )

ABC transporter ATP-binding protein

NC_005945
(Bacillus anthracis Sterne)

6e-44

366) Msp_0610
( YP_447651.1 )

molybdenum ABC transporter ATP-binding protein

NC_007681
(Methanosphaera stadtmanae DSM 3091)

9e-44

367) Cbei_4671
( YP_001311735.1 )

ABC transporter

NC_009617
(Clostridium beijerinckii NCIMB 8052)

9e-44

368) BT9727_5081
( YP_039391.1 )

bacitracin ABC transporter ATP-binding protein

NC_005957
(Bacillus thuringiensis 97-27)

1e-43

369) BBR47_40520
( YP_002773533.1 )

ABC transporter ATP-binding protein

NC_012491
(Brevibacillus brevis NBRC 100599)

1e-43

370) CLD_2970
( YP_001781218.1 )

antibiotic ABC transporter ATP-binding protein

NC_010516
(Clostridium botulinum Okra)

1e-43

371) CBF_1645
( YP_005674565.1 )

antibiotic ABC transporter ATP-binding protein

NC_017297
(Clostridium botulinum 230613)

2e-43

372) CLI_1663
( YP_001390925.1 )

antibiotic ABC transporter ATP-binding protein

NC_009699
(Clostridium botulinum Langeland)

2e-43

373) LMOSLCC2540_0756
( YP_006678299.1 )

ABC transporter ATP-binding protein

NC_018586
(Listeria monocytogenes SLCC2540)

2e-43

374) BC5400
( NP_835061.1 )

bacitracin transport ATP-binding protein bcrA

NC_004722
(Bacillus cereus ATCC 14579 )

3e-43

375) spaF
( YP_003867651.1 )

ABC transporter

NC_014479
(Bacillus subtilis W23)

3e-43

376) GYO_3691
( YP_004878898.1 )

bacitracin transport ATP-binding protein BcrA

NC_016047
(Bacillus subtilis TU-B-10)

4e-43

377) SSU05_0946
( YP_001198312.1 )

hypothetical protein

NC_009442
(Streptococcus suis 05ZYH33)

5e-43

378) SSU98_0954
( YP_001200512.1 )

hypothetical protein

NC_009443
(Streptococcus suis 98HAH33)

5e-43

379) SSUD12_1307
( YP_006082843.1 )

hypothetical protein

NC_017621
(Streptococcus suis D12)

5e-43

380) SSUSC84_0854
( YP_003024866.1 )

lantibiotic transport ATP-binding protein

NC_012924
(Streptococcus suis SC84)

5e-43

381) HBHAL_1859
( YP_006179500.1 )

ABC-type transport system ATP-binding protein

NC_017668
(Halobacillus halophilus DSM 2266)

5e-43

382) ftsH
( YP_006831454.1 )

FtsH-2 peptidase, Metallo peptidase, MEROPS family M41, membrane protease FtsH catalytic subunit

NC_018693
(Bacillus thuringiensis MC28)

6e-43

383) Arth_0386
( YP_829887.1 )

ABC transporter-like protein

NC_008541
(Arthrobacter sp. FB24)

7e-43

384) BACI_c53950
( YP_003795079.1 )

ABC transporter ATP-binding protein

NC_014335
(Bacillus cereus CI)

7e-43

385) BCG9842_B5428
( YP_002448938.1 )

ABC transporter ATP-binding protein

NC_011772
(Bacillus cereus G9842)

7e-43

386) BMB171_C4994
( YP_003667522.1 )

bacitracin transporter ATP-binding protein BcrA

NC_014171
(Bacillus thuringiensis BMB171)

8e-43

387) EUBELI_20033
( YP_002935314.1 )

antibiotic transport system ATP-binding protein

NC_012780
(Eubacterium eligens ATCC 27750)

8e-43

388) MCP_1237
( YP_003356292.1 )

ABC transporter ATP-binding protein

NC_013665
(Methanocella paludicola SANAE)

8e-43

389) bcrA
( YP_006789551.1 )

bacitracin ABC transporter ATP-binding protein

NC_018664
(Clostridium acidurici 9a)

9e-43

390) BTG_21385
( YP_006605726.1 )

ABC transporter ATP-binding protein

NC_018500
(Bacillus thuringiensis HD-771)

2e-42

391) Desmer_3151
( YP_006622904.1 )

multidrug ABC transporter ATPase

NC_018515
(Desulfosporosinus meridiei DSM 13257)

2e-42

392) Mtc_1578
( YP_005380848.1 )

multidrug ABC transporter ATPase

NC_017034
(Methanocella conradii HZ254)

3e-42

393) GY4MC1_1744
( YP_003989129.1 )

ABC transporter

NC_014650
(Geobacillus sp. Y4.1MC1)

5e-42

394) CD630_03660
( YP_001086833.1 )

ABC transporter multidrug-family ATP-binding protein Tn916-like, CTn1-Orf11

NC_009089
(Clostridium difficile 630)

1e-41

395) GYO_0456
( YP_004875803.1 )

bacitracin transport ATP-binding protein BcrA

NC_016047
(Bacillus subtilis TU-B-10)

1e-41

396) Geoth_1824
( YP_004587871.1 )

Fe(3+)-transporting ATPase

NC_015660
(Geobacillus thermoglucosidasius C56-YS93)

9e-42

397) AXY_04780
( YP_006844372.1 )

ABC transporter ATP-binding protein

NC_018704
(Amphibacillus xylanus NBRC 15112)

2e-41

398) CLB_1867
( YP_001384188.1 )

ABC transporter ATP-binding protein

NC_009697
(Clostridium botulinum ATCC 19397)

3e-41

399) CBO1929
( YP_001254432.1 )

ABC transporter ATP-binding protein

NC_009495
(Clostridium botulinum ATCC 3502)

3e-41

400) CLC_1874
( YP_001387729.1 )

ABC transporter ATP-binding protein

NC_009698
(Clostridium botulinum Hall)

3e-41

401) CLM_2146
( YP_002804318.1 )

ABC transporter ATP-binding protein

NC_012563
(Clostridium botulinum Kyoto)

3e-41

402) SIR_0291
( YP_008512251.1 )

ABC transporter protein

NC_022246
(Streptococcus intermedius B196)

1e-40

403) spaF
( YP_006330292.1 )

antibiotic transport system ATP-binding protein

NC_017912
(Bacillus amyloliquefaciens Y2)

4e-41

404) spaF
( YP_005422625.1 )

phosphate import ATP-binding protein pstB

NC_017061
(Bacillus amyloliquefaciens YAU B9601-Y2)

4e-41

405) SII_0271
( YP_008496471.1 )

ABC transporter protein

NC_022237
(Streptococcus intermedius C270)

6e-41

406) CLK_1385
( YP_001787323.1 )

ABC transporter ATP-binding protein

NC_010520
(Clostridium botulinum Loch Maree)

1e-40

407) ycbN
( YP_007425443.1 )

putative ABC efflux transporter

NC_020244
(Bacillus subtilis XF-1)

1e-40

408) I653_01255
( YP_007661029.1 )

bacitracin ABC transporter ATP-binding protein

NC_020832
(subtilis subtilis BAB-1)

1e-40

409) SCIM_0233
( YP_006469135.1 )

ABC transporter ATP-binding protein

NC_018073
(Streptococcus intermedius JTH08)

2e-40

410) TTHA1459
( YP_144725.1 )

ABC transporter ATP-binding protein

NC_006461
(Thermus thermophilus HB8)

2e-40

411) TtJL18_0588
( YP_006058279.1 )

multidrug ABC transporter ATPase

NC_017587
(Thermus thermophilus JL-18)

2e-40

412) Ththe16_1471
( YP_005641000.1 )

sulfate-transporting ATPase

NC_017272
(Thermus thermophilus SG0.5JP17-16)

2e-40

413) NT01CX_1429
( YP_877510.1 )

antibiotic transport ATP-binding protein spaF/mutF

NC_008593
(Clostridium novyi NT)

7e-41

414) Tbis_3430
( YP_003654012.1 )

ABC transporter-like protein

NC_014165
(Thermobispora bispora DSM 43833)

9e-41

415) BMWSH_1723
( YP_005493914.1 )

multidrug ABC transporter ATPase component-like protein

NC_017138
(Bacillus megaterium WSH-002)

1e-40

416) srtF
( YP_600478.1 )

lantibiotic ABC transporter ATP-binding protein

NC_008023
(Streptococcus pyogenes MGAS2096)

2e-40

417) srtF
( YP_282171.1 )

lantibiotic ABC transporter ATP-binding protein

NC_007297
(Streptococcus pyogenes MGAS5005)

2e-40

418) srtF
( YP_280253.1 )

lantibiotic transport ATP-binding protein

NC_007296
(Streptococcus pyogenes MGAS6180)

2e-40

419) srtF
( YP_596658.1 )

lantibiotic transport ATP-binding protein

NC_008021
(Streptococcus pyogenes MGAS9429)

2e-40

420) srtF
( NP_269247.1 )

lantibiotic associated ABC transporter ATP-binding protein

NC_002737
(Streptococcus pyogenes SF370)

2e-40

421) srtF
( YP_598532.1 )

Lantibiotic transport ATP-binding protein

NC_008022
(Streptococcus pyogenes MGAS10270)

3e-40

422) FP2_08430
( YP_007836715.1 )

ABC-type multidrug transport system, ATPase component

NC_021042
(Faecalibacterium prausnitzii L2/6)

3e-40

423) CLL_A3442
( YP_001887616.1 )

bacitracin ABC transporter ATP-binding protein

NC_010674
(Clostridium botulinum Eklund 17B)

4e-40

424) srtF
( YP_007587391.2 )

lantibiotic ABC transporter ATP-binding protein

NC_020540
(Streptococcus pyogenes M1 476)

3e-40

425) srtF
( YP_602453.1 )

lantibiotic transport ATP-binding protein

NC_008024
(Streptococcus pyogenes MGAS10750)

3e-40

426) CLJ_B2132
( YP_002862912.1 )

ABC transporter ATP-binding protein

NC_012658
(Clostridium botulinum 657)

3e-40

427) nsuF
( YP_004559253.1 )

lantibiotic protection ABC transporter ATP-binding protein

NC_015600
(Streptococcus pasteurianus ATCC 43144)

4e-40

428) OCC_10770
( YP_008429066.1 )

ABC transporter

NC_022084
(Thermococcus litoralis DSM 5473)

5e-40

429) CA_C3026
( NP_349627.1 )

GDSL (phospholipase B) family lipolitic protein

NC_003030
(Clostridium acetobutylicum ATCC 824)

6e-40

430) SMB_G3062
( YP_004637680.1 )

GDSL (phospholipase B) family lipolitic protein

NC_015687
(Clostridium acetobutylicum DSM 1731)

6e-40

431) CEA_G3032
( YP_005672164.1 )

Protein from GDSL (phospholipase B) family of lipolitic enzyme

NC_017295
(Clostridium acetobutylicum EA 2018)

6e-40

432) MC28_4987
( YP_006831808.1 )

calcium/proton exchanger

NC_018693
(Bacillus thuringiensis MC28)

1e-39

433) CLJU_c00800
( YP_003778285.1 )

ABC transporter ATPase

NC_014328
(Clostridium ljungdahlii ATCC 49587)

1e-39

434) GYMC52_1613
( YP_004132199.1 )

ABC transporter

NC_014915
(Geobacillus sp. Y412MC52)

1e-39

435) GYMC61_2485
( YP_003253565.1 )

ABC transporter

NC_013411
(Geobacillus sp. Y412MC61)

1e-39

436) Clopa_0119
( YP_007938885.1 )

ABC-type multidrug transport system, ATPase component

NC_021182
(Clostridium pasteurianum BC1)

1e-39

437) nosF1
( YP_004203065.1 )

copper transport ATP-binding protein NosF

NC_014974
(Thermus scotoductus SA-01)

1e-39

438) bcrA
( YP_001125610.1 )

bacitracin transport ATP-binding protein BcrA

NC_009328
(Geobacillus thermodenitrificans NG80-2)

8e-40

439) GYMC10_5326
( YP_003245342.1 )

ABC transporter-like protein

NC_013406
(Paenibacillus sp. Y412MC10)

9e-40

440) SSUJS14_0622
( YP_006075984.1 )

NsuF

NC_017618
(Streptococcus suis JS14)

1e-39

441) NJAUSS_0609
( YP_007570564.1 )

Lantibiotic transport ATP-binding protein SrtF

NC_020526
(Streptococcus suis SC070731)

1e-39

442) M493_08470
( REF_PRJNA208285:M493 )

ABC transporter ATP-binding protein

NC_022080
(Geobacillus sp. JF8)

2e-39

443) Theos_1664
( YP_006972788.1 )

ABC-type multidrug transport system, ATPase component

NC_019386
(Thermus oshimai JL-2)

2e-39

444) CBF_1978
( YP_005674866.1 )

ABC transporter ATP-binding protein

NC_017297
(Clostridium botulinum 230613)

3e-39

445) H04402_01948
( YP_005678491.1 )

ABC-type multidrug/protein/lipid transport system, ATPase component

NC_017299
(Clostridium botulinum H04402 065)

3e-39

446) CLI_1994
( YP_001391252.1 )

ABC transporter ATP-binding protein

NC_009699
(Clostridium botulinum Langeland)

3e-39

447) GC56T3_1867
( YP_003671433.1 )

ABC transporter

NC_014206
(Geobacillus sp. C56-T3)

3e-39

448) GK1643
( YP_147496.1 )

ABC transporter ATP-binding protein

NC_006510
(Geobacillus kaustophilus HTA426)

4e-39

449) GTCCBUS3UF5_19030
( YP_004982313.1 )

ABC transporter

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

4e-39

450) TCCBUS3UF1_16750
( YP_005654790.1 )

ABC transporter

NC_017278
(Thermus sp. CCB_US3_UF1)

1e-38

451) LGAS_1495
( YP_815289.1 )

ABC-type multidrug transport system, ATPase component

NC_008530
(Lactobacillus gasseri ATCC 33323)

5e-39

452) Calow_2077
( YP_004003388.1 )

ABC transporter-like protein

NC_014657
(Caldicellulosiruptor owensensis OL)

9e-39

453) Awo_c34050
( YP_005271020.1 )

antibiotic ABC transport system ATP-binding protein

NC_016894
(Acetobacterium woodii DSM 1030)

1e-38

454) srtF
( YP_006033924.1 )

antibiotic transport system ATP-binding protein

NC_017576
(Streptococcus gallolyticus ATCC 43143)

1e-38

455) nisF
( YP_004288009.1 )

lantibiotic ABC transporter ATP-binding protein

NC_015215
(Streptococcus gallolyticus ATCC BAA-2069)

1e-38

456) GALLO_1107
( YP_003430530.1 )

lantibiotic ABC transporter ATP-binding protein

NC_013798
(Streptococcus gallolyticus UCN34)

1e-38

457) CLD_2696
( YP_001781492.1 )

ABC transporter ATP-binding protein

NC_010516
(Clostridium botulinum Okra)

1e-38

458) Athe_2348
( YP_002574191.1 )

ABC transporter

NC_012034
(Caldicellulosiruptor bescii DSM 6725)

2e-38

459) CLH_1613
( YP_001920999.1 )

bacitracin transport ATP-binding protein BcrA

NC_010723
(Clostridium botulinum Alaska E43)

2e-38

460) HPL003_22925
( YP_005077530.1 )

ABC transporter ATP-binding protein

NC_016641
(Paenibacillus terrae HPL-003)

3e-38

461) Shel_03750
( YP_003142785.1 )

multidrug ABC transporter ATPase

NC_013165
(Slackia heliotrinireducens DSM 20476)

2e-38

462) CLH_3221
( YP_001922586.1 )

bacitracin transport ATP-binding protein BcrA

NC_010723
(Clostridium botulinum Alaska E43)

3e-38

463) Bcoa_2159
( YP_004860121.1 )

ABC transporter-like protein

NC_016023
(Bacillus coagulans 36D1)

1e-37

464) TepRe1_0964
( YP_004460420.1 )

ABC transporter

NC_015519
(Tepidanaerobacter acetatoxydans Re1)

1e-37

465) bcrA
( YP_008618803.1 )

Bacitracin transport ATP-binding protein BcrA

NC_019954
(Tepidanaerobacter acetatoxydans Re1)

1e-37

466) ABC3556
( YP_177050.1 )

multidrug ABC transporter ATP-binding protein

NC_006582
(Bacillus clausii KSM-K16)

6e-38

467) CLM_0296
( YP_002802556.1 )

bacitracin transport ATP-binding protein BcrA

NC_012563
(Clostridium botulinum Kyoto)

1e-37

468) GYMC10_4498
( YP_003244528.1 )

ABC transporter-like protein

NC_013406
(Paenibacillus sp. Y412MC10)

1e-37

469) EUBREC_3044
( YP_002938906.1 )

YcbN

NC_012781
(Eubacterium rectale ATCC 33656)

8e-38

470) Ccur_04150
( YP_003150820.1 )

multidrug ABC transporter ATPase

NC_013170
(Cryptobacterium curtum DSM 15641)

2e-37

471) BXY_04430
( YP_007791277.1 )

ABC-type multidrug transport system, ATPase component

NC_021017
(Bacteroides xylanisolvens XB1A)

2e-37

472) Tmath_1653
( YP_003677370.1 )

ABC transporter-like protein

NC_014209
(Thermoanaerobacter mathranii A3)

8e-37

473) BCO26_2289
( YP_004569733.1 )

ABC transporter-like protein

NC_015634
(Bacillus coagulans 2-6)

1e-36

474) BT_0925
( NP_809838.1 )

ABC transporter ATP-binding protein

NC_004663
(Bacteroides thetaiotaomicron VPI-5482)

1e-36

475) GWCH70_1811
( YP_002949819.1 )

ABC transporter

NC_012793
(Geobacillus sp. WCH70)

1e-36

476) ANT_28230
( YP_004175449.1 )

putative ABC transporter ATP-binding protein

NC_014960
(Anaerolinea thermophila UNI-1)

1e-36

477) Sros_4674
( YP_003340270.1 )

ABC transporter

NC_013595
(Streptosporangium roseum DSM 43021)

9e-37

478) PM3016_4107
( YP_005314038.1 )

ABC transporter

NC_016935
(Paenibacillus mucilaginosus 3016)

1e-36

479) B2K_21335
( YP_006190979.1 )

ABC transporter

NC_017672
(Paenibacillus mucilaginosus K02)

1e-36

480) KNP414_04701
( YP_004643101.1 )

ABC transporter

NC_015690
(Paenibacillus mucilaginosus KNP414)

1e-36

481) AF1136
( NP_069965.1 )

ABC transporter ATP-binding protein

NC_000917
(Archaeoglobus fulgidus DSM 4304)

2e-36

482) SGR_2962
( YP_001824474.1 )

ABC transporter ATP-binding protein

NC_010572
(Streptomyces griseus NBRC 13350)

3e-36

483) BJ6T_20250
( YP_005606892.1 )

hypothetical protein

NC_017249
(Bradyrhizobium japonicum USDA 6)

4e-36

484) Xcel_0761
( YP_003325358.1 )

ABC transporter

NC_013530
(Xylanimonas cellulosilytica DSM 15894)

3e-36

485) Dehly_0486
( YP_003758121.1 )

ABC transporter-like protein

NC_014314
(Dehalogenimonas lykanthroporepellens BL-DC-9)

4e-36

486) Ocepr_0793
( YP_004057423.1 )

ABC transporter

NC_014761
(Oceanithermus profundus DSM 14977)

7e-36

487) Aboo_0816
( YP_003483187.1 )

ABC transporter

NC_013926
(Aciduliprofundum boonei T469)

1e-35

488) COB47_0879
( YP_003840174.1 )

ABC transporter-like protein

NC_014392
(Caldicellulosiruptor obsidiansis OB47)

1e-35

489) O3I_005615
( YP_006806060.1 )

ABC transporter-like protein

NC_018681
(Nocardia brasiliensis HUJEG-1)

5e-36

490) H04402_01313
( YP_005677865.1 )

bacitracin ABC transporter ATP-binding protein

NC_017299
(Clostridium botulinum H04402 065)

6e-36

491) Calkr_1720
( YP_004026823.1 )

ABC transporter-like protein

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

9e-36

492) Sinf_0951
( YP_005203755.1 )

lantibiotic ABC transporter, ATP-binding protein

NC_016826
(Streptococcus infantarius CJ18)

1e-35

493) Clopa_1542
( YP_007940158.1 )

ABC-type multidrug transport system, ATPase component

NC_021182
(Clostridium pasteurianum BC1)

1e-35

494) nisF
( YP_003353737.1 )

nisin transport protein NisF

NC_013656
(Lactococcus lactis KF147)

1e-35

495) CLS_29420
( YP_007850237.1 )

ABC-type multidrug transport system, ATPase component

NC_021047
(Clostridium saccharolyticum K10)

2e-35

496) CK1_03970
( YP_007782386.1 )

ABC-type multidrug transport system, ATPase component

NC_021014
(Ruminococcus sp. SR1/5)

2e-35

497) CLD_0528
( YP_001779878.1 )

bacitracin transport ATP-binding protein BcrA

NC_010516
(Clostridium botulinum Okra)

2e-35

498) Calhy_1045
( YP_003992141.1 )

ABC transporter-like protein

NC_014652
(Caldicellulosiruptor hydrothermalis 108)

2e-35

499) Memar_1342
( YP_001047254.1 )

ABC transporter-related protein

NC_009051
(Methanoculleus marisnigri JR1)

2e-35

500) CKL_0036
( YP_001393463.1 )

ABC transporter

NC_009706
(Clostridium kluyveri DSM 555)

2e-35

501) CKR_0026
( YP_002470491.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

2e-35

502) Clole_2639
( YP_004309538.1 )

sulfate-transporting ATPase

NC_015275
(Clostridium lentocellum DSM 5427)

9e-36

503) INV104_09160
( YP_006062572.1 )

putative lantibiotic transport ATP-binding protein

NC_017591
(Streptococcus pneumoniae INV104)

9e-36

504) bcrA
( YP_006701773.1 )

bacitracin transport ATP-binding protein bcrA

NC_018594
(Streptococcus pneumoniae A45)

3e-35

505) SPN23F_09830
( YP_002510959.1 )

lantibiotic transport ATP-binding protein

NC_011900
(Streptococcus pneumoniae ATCC 700669)

3e-35

506) SPJ_1000
( YP_002736070.1 )

bacitracin transport ATP-binding protein BcrA

NC_012466
(Streptococcus pneumoniae JJA)

3e-35

507) Calla_1119
( YP_004798729.1 )

ABC transporter-like protein

NC_015949
(Caldicellulosiruptor lactoaceticus 6A)

4e-35

508) Calow_1448
( YP_004002795.1 )

ABC transporter-like protein

NC_014657
(Caldicellulosiruptor owensensis OL)

4e-35

509) GQS_09975
( YP_004763565.1 )

putative ABC transporter

NC_015865
(Thermococcus sp. 4557)

4e-35

510) srtF
( YP_004727746.1 )

lantibiotic transport ATP-binding protein srtF

NC_015760
(Streptococcus salivarius CCHSS3)

4e-35

511) nisF
( YP_007507892.1 )

ABC transporter ATPase component

NC_020450
(Lactococcus lactis IO-1)

4e-35

512) nisF
( YP_005867991.1 )

nisin transport protein NisF

NC_017486
(Lactococcus lactis CV56)

7e-35

513) CLM_1400
( YP_002803601.1 )

bacitracin transport ATP-binding protein BcrA

NC_012563
(Clostridium botulinum Kyoto)

1e-34

514) KE3_1033
( YP_008356331.1 )

SpaF

NC_021900
(Streptococcus lutetiensis 033)

1e-34

515) CD630_10970
( YP_001087580.1 )

ABC transporter multidrug-family ATP-binding protein Tn1549-like, CTn4-Orf28

NC_009089
(Clostridium difficile 630)

2e-34

516) RHOM_13575
( YP_004839753.1 )

lantibiotic ABC transporter ATP-binding protein

NC_015977
(Roseburia hominis A2-183)

2e-34

517) alr0970
( NP_485013.1 )

ABC transporter ATP-binding protein

NC_003272
(Nostoc sp. PCC 7120)

2e-34

518) RHOM_10505
( YP_004839144.1 )

lantibiotic ABC transporter ATP-binding protein

NC_015977
(Roseburia hominis A2-183)

3e-34

519) CK5_04950
( YP_007804059.1 )

ABC-type multidrug transport system, ATPase component

NC_021022
([Ruminococcus] obeum A2-162)

3e-34

520) Csac_2246
( YP_001181015.1 )

ABC transporter

NC_009437
(Caldicellulosiruptor saccharolyticus DSM 8903)

3e-34

521) CcmA9
( NP_623446.1 )

multidrug ABC transporter ATPase

NC_003869
(Thermoanaerobacter tengcongensis MB4)

4e-34

522) Cthe_3066
( YP_001039455.1 )

ABC transporter-like protein

NC_009012
(Clostridium thermocellum ATCC 27405)

3e-34

523) Clo1313_0616
( YP_005687147.1 )

ABC transporter

NC_017304
(Clostridium thermocellum DSM 1313)

3e-34

524) CLD_3324
( YP_001780868.1 )

ABC transporter ATP-binding protein

NC_010516
(Clostridium botulinum Okra)

3e-34

525) Awo_c27310
( YP_005270373.1 )

ABC transporter ATP-binding protein

NC_016894
(Acetobacterium woodii DSM 1030)

4e-34

526) CLI_1328
( YP_001390593.1 )

ABC transporter ATP-binding protein

NC_009699
(Clostridium botulinum Langeland)

4e-34

527) PFC_00460
( YP_006491358.1 )

ABC transporter

NC_018092
(Pyrococcus furiosus COM1)

4e-34

528) PF0279
( NP_578008.1 )

ABC transporter

NC_003413
(Pyrococcus furiosus DSM 3638)

4e-34

529) AciM339_0254
( YP_007246317.1 )

ABC-type multidrug transport system, ATPase component

NC_019942
(Aciduliprofundum sp. MAR08-339)

5e-34

530) TTC1095
( YP_005064.1 )

ABC transporter ATP-binding protein

NC_005835
(Thermus thermophilus HB27)

5e-34

531) CA_C2734
( NP_349340.1 )

multidrug ABC transporter ATPase

NC_003030
(Clostridium acetobutylicum ATCC 824)

6e-34

532) SMB_G2769
( YP_004637391.1 )

multidrug ABC transporter ATPase

NC_015687
(Clostridium acetobutylicum DSM 1731)

6e-34

533) CEA_G2743
( YP_005671875.1 )

multidrug ABC transporter ATPase

NC_017295
(Clostridium acetobutylicum EA 2018)

6e-34

534) Cal7507_5744
( YP_007068899.1 )

polyamine-transporting ATPase

NC_019682
(Calothrix sp. PCC 7507)

6e-34

535) GPOL_c31670
( YP_005283548.1 )

putative ABC transporter ATP-binding protein

NC_016906
(Gordonia polyisoprenivorans VH2)

6e-34

536) CDR20291_1750
( YP_003218242.1 )

lantibiotic ABC transporter ATP-binding protein

NC_013316
(Clostridium difficile R20291)

1e-33

537) Noca_1320
( YP_922521.1 )

ABC transporter-like protein

NC_008699
(Nocardioides sp. JS614)

2e-33

538) PAB1668
( NP_126735.1 )

atp-binding transport protein

NC_000868
(Pyrococcus abyssi GE5)

3e-33

539) Mpet_0643
( YP_003893855.1 )

ABC transporter-like protein

NC_014507
(Methanoplanus petrolearius DSM 11571)

3e-33

540) Npun_F2805
( YP_001866281.1 )

ABC transporter

NC_010628
(Nostoc punctiforme PCC 73102)

4e-33

541) Riv7116_0431
( YP_007053581.1 )

multidrug ABC transporter ATPase

NC_019678
(Rivularia sp. PCC 7116)

1e-32

542) Riv7116_0434
( YP_007053584.1 )

multidrug ABC transporter ATPase

NC_019678
(Rivularia sp. PCC 7116)

1e-32

543) SCD20.03
( NP_628747.1 )

ABC transporter ATP-binding protein

NC_003888
(Streptomyces coelicolor A3(2))

1e-32

544) Desaci_4206
( YP_006468397.1 )

ABC-type multidrug transport system, ATPase component

NC_018068
(Desulfosporosinus acidiphilus SJ4)

6e-33

545) Bcell_3388
( YP_004096361.1 )

ABC transporter

NC_014829
(Bacillus cellulosilyticus DSM 2522)

1e-32

546) Mbar_A0659
( YP_304218.1 )

ABC transporter, ATP-binding protein

NC_007355
(Methanosarcina barkeri Fusaro)

2e-32

547) TPE_0990
( YP_008434622.1 )

bacitracin ABC transporter ATP-binding protein

NC_022097
(Treponema pedis T A4)

2e-32

548) Bcoa_3072
( YP_004861028.1 )

ABC transporter-like protein

NC_016023
(Bacillus coagulans 36D1)

5e-32

549) Amuc_1760
( YP_001878359.1 )

ABC transporter

NC_010655
(Akkermansia muciniphila ATCC BAA-835)

8e-32

550) Tpen_1333
( YP_920733.1 )

ABC transporter-like protein

NC_008698
(Thermofilum pendens Hrk 5)

9e-32

551) Cri9333_1783
( YP_007142178.1 )

Fe(3+)-transporting ATPase

NC_019753
(Crinalium epipsammum PCC 9333)

3e-31

552) ycbN
( YP_003170376.1 )

bacitracin ABC transporter ATP-binding protein

NC_013198
(Lactobacillus rhamnosus GG)

3e-31

553) LRHM_0608
( YP_005865100.1 )

putative multidrug ABC transporter ATP-binding component

NC_017482
(Lactobacillus rhamnosus GG)

3e-31

554) MODMU_2651
( YP_006366565.1 )

ABC transporter ATP-binding subunit related

NC_017955
(Modestobacter marinus BC501)

7e-31

555) Cyan8802_2298
( YP_003138010.1 )

ABC transporter

NC_013161
(Cyanothece sp. PCC 8802)

1e-29

556) PCC8801_2246
( YP_002372425.1 )

ABC transporter-like protein

NC_011726
(Cyanothece sp. PCC 8801)

9e-30

557) Bmur_2810
( YP_003635076.1 )

ABC transporter

NC_014150
(Brachyspira murdochii DSM 12563)

2e-29

558) Osc7112_1679
( YP_007114590.1 )

Fe(3+)-transporting ATPase

NC_019729
(Oscillatoria nigro-viridis PCC 7112)

2e-29

559) Emtol_1693
( YP_006872863.1 )

ABC transporter related protein

NC_018748
(Emticicia oligotrophica DSM 17448)

7e-29

560) srtF
( YP_008168970.1 )

lantibiotic transport ATP-binding protein SrtF

NC_021670
(Staphylococcus aureus Bmb9393)

2e-24

561) epiF
( YP_186701.1 )

epidermin immunity protein F

NC_002951
(Staphylococcus aureus COL)

2e-24

562) epiF
( YP_494453.1 )

lantibiotic epidermin immunity protein F

NC_007793
(Staphylococcus aureus FPR3757)

2e-24

563) BN843_18240
( YP_007868889.1 )

Bacitracin transport ATP-binding protein bcrA

NC_021059
(Staphylococcus aureus M1)

2e-24

564) SAS1741
( YP_043857.1 )

lantibiotic transport ATP-binding protein

NC_002953
(Staphylococcus aureus MSSA476)

2e-24

565) bsaF
( NP_646577.1 )

hypothetical protein

NC_003923
(Staphylococcus aureus MW2)

2e-24

566) SAOUHSC_01948
( YP_500447.1 )

ABC transporter

NC_007795
(Staphylococcus aureus NCTC 8325)

2e-24

567) bsaF
( YP_001332745.1 )

lantibiotic immunity protein F

NC_009641
(Staphylococcus aureus Newman)

2e-24

568) SAT0131_01939
( YP_005753075.1 )

Lantibiotic immunity protein F

NC_017347
(Staphylococcus aureus T0131)

2e-24

569) epiF
( YP_001575692.1 )

epidermin ABC transporter ATP-binding protein

NC_010079
(Staphylococcus aureus TCH1516)

2e-24

570) SATW20_18150
( YP_005731803.1 )

lantibiotic immunity protein

NC_017331
(Staphylococcus aureus TW20)

2e-24

571) SAVC_08325
( YP_005291258.1 )

lantibiotic immunity protein F

NC_016912
(Staphylococcus aureus VC40)

2e-24

572) yxlF
( YP_005367558.1 )

ABC transporter ATP-binding protein

NC_017030
(Corallococcus coralloides DSM 2259)

7e-24

573) MS7_1818
( YP_005758257.1 )

lantibiotic protection ABC transporter ATP-binding subunit

NC_017351
(Staphylococcus aureus 11819-97)

5e-24

574) SAB1678c
( YP_417141.1 )

transport protein

NC_007622
(Staphylococcus aureus RF122)

9e-24

575) SAOV_1802
( YP_005737287.1 )

epidermin immunity protein F

NC_017337
(Staphylococcus aureus ED133)

1e-23

576) SARLGA251_17010
( YP_005755680.1 )

lantibiotic immunity protein

NC_017349
(Staphylococcus aureus LGA251)

1e-23

• Sequence Alignments

1) cdd4 in NC_009089


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  481 bits (1815),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 296/297 (99%), Positives = 297/297 (100%), Gaps = 0/297 (0%)

Query  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60
            MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120
            INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180
            RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNKGQSQIAIKTKNVVSAQK  240
            KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN+GQSQIAIKTKNVVSAQK
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297
            LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

2) CDBI1_03150 in NC_017179


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  481 bits (1813),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 294/297 (99%), Positives = 297/297 (100%), Gaps = 0/297 (0%)

Query  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60
            MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120
            INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLENQKNKKVNQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180
            RLENQKNKKV+QYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKAKNVVSAQK  240
            KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIK+KNVVSAQK
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  LLNTKGYMSLIQNGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297
            LLNTKGYMSLIQ+GYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

3) cdd4 in NC_013315


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  481 bits (1814),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 294/297 (99%), Positives = 297/297 (100%), Gaps = 0/297 (0%)

Query  4    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  63
            MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  64   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  123
            INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  124  RLENQKNKKVNQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  183
            RLENQKNKKV+QYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  184  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKAKNVVSAQK  243
            KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIK+KNVVSAQK
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  244  LLNTKGYMSLIQNGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  300
            LLNTKGYMSLIQ+GYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

4) d4 in NC_013316


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  481 bits (1814),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 294/297 (99%), Positives = 297/297 (100%), Gaps = 0/297 (0%)

Query  4    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  63
            MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  64   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  123
            INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  124  RLENQKNKKVNQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  183
            RLENQKNKKV+QYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  184  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKAKNVVSAQK  243
            KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIK+KNVVSAQK
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  244  LLNTKGYMSLIQNGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  300
            LLNTKGYMSLIQ+GYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

5) BBR47_30950 in NC_012491


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  326 bits (1222),  Expect = 9e-91, Method: Compositional matrix adjust.
 Identities = 182/297 (62%), Positives = 248/297 (84%), Gaps = 1/297 (0%)

Query  1    MNTVIRTENLSKHYGGAYCVQRVNLAVGEGEVYGFLGPNGAGKSTTLKMLLGLVKPTEGS  60
            M+ +IRT+ LSK+Y   + V+ ++L V +G VYGFLGPNGAGKSTTLKMLLGL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VSVFGKDFS-RNRLEILSQTGSLIEAPSYYGHLTGLENMRVMQRLRDVPDKQVEKALQIV  119
            ++++GK+++ +NR+ IL + GSLIE+PSYYGHLTGLENM +MQRL D+P K+V+ AL+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  RLEKQQNKKVDQYSLGMKQRLGIAMALLHFPKLVILDEPTNGLDPAGIGEIRELIQSLPH  179
            RLE+Q+NKKV QYSLGMKQRLGIAMA++ FPKL+ILDEPTNGLDPAGI EIRELI+SLP+
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  QYGMTVLLSSHLLSEIEQVATSIGIIHGGKLLFQGSMEQLQRNSQPRVWMKTQDNDKARR  239
            +YGMTVL+SSHLLSEI+Q+ATSIGII+ G L+FQ+S+ +L+  +Q+++ +KT++   A++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  240  VLQDRELSPSLQDGFLVMEGMGDREVAETNRALMMAGIDVYRIEVHKQSLESIFLSL  296
            +L+ +   + +QDG+L +E + D +VA  N  L+ + IDV+RIE HK+SLE IFL L
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

6) Desgi_2301 in NC_021184


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  322 bits (1206),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 180/297 (61%), Positives = 245/297 (83%), Gaps = 0/297 (0%)

Query  1    MSDIITTTGLCKQYGKVLRVKDLDLSVPEGVVYGFLGPNGAGKSTTMKMILGLARPTAGT  60
            M  II T  L K+Y K++RVKD+DL VP+G VYGFLGPNGAGKSTT+KM+LGLA+PT G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ITVFGRQVNNRNRLEILKDVGSLIESPSYYGHLTGAENLRIIGTLKGVPDKDIGRVLQIV  120
            I ++G+++N++NR+ ILKD+GSLIESPSYYGHLTG EN+ I+  L ++P K++   L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLENQKEKKVGQYSMGMKQRLGLACALLGNPKLLILDEPTNGLDPAGIQEMRELICSLPQ  180
            RLENQK+KKV+QYS+GMKQRLG+A A++  PKLLILDEPTNGLDPAGI+E+RELI SLP+
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  QCGMTVMVSSHLLSEIEQIATNVGIISKGELVFQNSLSTLHERSRHSIAVRTLNNEAAAK  240
            + GMTV++SSHLLSEI+QIAT++GII+ GELVFQ+S+  LH+R++  IA++T N  +A K
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  ILGEQGISCHAQEDYLLLPELTDNELARYISRLFDRHIGVVRIEERRKTLEDIFLEL  297
            +L  +G     Q++YL + +L D+++A+  + L + +I+V RIEE++K+LEDIFLEL
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

7) Cbei_2844 in NC_009617


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  320 bits (1199),  Expect = 6e-89, Method: Compositional matrix adjust.
 Identities = 183/297 (62%), Positives = 250/297 (85%), Gaps = 0/297 (0%)

Query  1    MEHIIITNNLSKKYKDAYRVKDVDLKIPKNTVYGFLGPNGAGKSTTLKMILGLVKPTEGS  60
            ME II T+ LSK Y+  +RVKD+DL++P+ +VYGFLGPNGAGKSTTLKM+LGL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ITVFGKVANDKNRLEILRDVGSLIESPSYYGHLTAVENLKIVQTLRDVPEKNINKVLEIV  120
            I ++GK  N+KNR+ IL+D+GSLIESPSYYGHLT++EN+ I+Q L D+P KN+N  L IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLDNQKNKKVNEYSLGMKQRLGLAAALLNFPKLLILDEPTNGLDPAGIQEMRELISSLPK  180
            RL+NQKNKKV++YSLGMKQRLG+A A+++FPKLLILDEPTNGLDPAGI+E+RELI SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  KYDMTVVVSSHLLSEIDQMADTLGIINHGELIFQDNLKILHERSNHKLAIRTLDNAKSRI  240
            KY+MTV++SSHLLSEIDQ+A ++GIINHGEL+FQD++K LH+R++ ++AI+T +   ++ 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  ILNSYGMDCEVESEYLLLPQISDDFIIKCNKLFYENKIMILRMEERKKSLEDIFLEL  297
            +LN+ G    ++  YL + ++ D  + K N ++ +++I ++R+EE+KKSLEDIFLEL
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

8) Awo_c00700 in NC_016894


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  319 bits (1196),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 183/297 (62%), Positives = 249/297 (84%), Gaps = 0/297 (0%)

Query  1    MNHIIETKGLSKKYGNVLRVKDVDLMVPEGAIYGFLGPNGAGKSTTLKMILGLAKPTAGE  60
            M+ II T+ LSK Y +++RVKD+DL VP+GA+YGFLGPNGAGKSTTLKM+LGLAKPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IKVFGKKVTGKNRLENLKAVGSLIESPSYYGHLTGAENLQIFQTLRGVPKKNIDEVLKIV  120
            I+++GK +  KNR+  LK +GSLIESPSYYGHLTG EN+ I Q L ++PKKN++E LKIV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLDKQKDKKVNQYSLGMKQRLGFASALLGYPKLLILDEPTNGLDPAGIQEMRELIQLLPK  180
            RL++QK+KKV+QYSLGMKQRLG+A A++ +PKLLILDEPTNGLDPAGI+E+RELI+ LP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  KFGMTIVVSSHLLSEIDQLATQVGIIREGELVYQDSLTQLHQYSRKHLAVRTTNNDRAQL  240
            K+GMT+++SSHLLSEIDQ+AT +GII +GELV+QDS+ +LH+ ++ ++A++T N   AQ 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  FLSQNRIAWETQEDYLIIPQLKDQAMAELSKALIENDVGMVRIEERKKSLEDIFLEL  297
            +L+ +      Q++YL I +LKD  +A ++  L+++++++ RIEE+KKSLEDIFLEL
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

9) ELI_2309 in NC_014624


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  319 bits (1197),  Expect = 9e-89, Method: Compositional matrix adjust.
 Identities = 188/297 (64%), Positives = 244/297 (83%), Gaps = 2/297 (0%)

Query  1    MNNIVETKMLCKEYDSIYRVKHLSLQVREGEVYGFLGPNGAGKSTTMKMLLGLAHPTSGD  60
            M+ I+ T+ L KEY+ I+RVK++ L+V +G VYGFLGPNGAGKSTT+KMLLGLA PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ITVFGKPFTAENRLDILKHTGSLIESPSYYGHLTARENMYILQKLSNISEKDALEALRIV  120
            I ++GK +   NR+ ILK+ GSLIESPSYYGHLT+ ENM I+Q+L +++ K+  EAL+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLDNQLDKKVSQFSFGMKQRLGIAMAIAGFPKLLILDEPTNGLDPAGIEEIRELIKSLPS  180
            RL+NQ +KKVSQ+S+GMKQRLGIAMAI  FPKLLILDEPTNGLDPAGIEEIRELIKSLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  KYGITVMISSHLLSEIDQMATTCGIINHGELIFQGSLKSLHAYSSASIAFKTSNPVGTEA  240
            KYG+TV+ISSHLLSEIDQ+AT+ GIINHGEL+FQ+S+K LH  + + IA+KT N V+++ 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  LLHRM--KPQIEDDTVLVHDIDDKMTAQINRLLIENGIDVYRIEEHALSLEDIFLKL  295
            LL+     + I+D+ + ++++ D   A+IN +L+++ IDV+RIEEH  SLEDIFL L
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

10) Desru_0843 in NC_015589


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  306 bits (1147),  Expect = 8e-85, Method: Compositional matrix adjust.
 Identities = 184/300 (62%), Positives = 243/300 (81%), Gaps = 0/300 (0%)

Query  1    MAAIIQTNGLCKQYGKILRVKDLDLSVPEGAVYGFLGPNGAGKSTTLKMILGLAKPTAGS  60
            M  II+T+ L K+Y KI+RVKD+DL VP+GAVYGFLGPNGAGKSTTLKM+LGLAKPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ITVFEKTVNSKNRMSILKNVGSLIESPSYYGHLSGHENLQIICTLKSVPEKEIERVLQIV  120
            I ++ K +N KNR+SILK++GSLIESPSYYGHL+G EN+ I+  L  +P K+++  L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLEKQKDKKVSQYSLGMKQRLGLACALLGSPKLLILDEPTNGLDPAGIQEMRELICSLPK  180
            RLE+QK+KKVSQYSLGMKQRLG+A A++  PKLLILDEPTNGLDPAGI+E+RELI SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  EYGMTVLVSSHLLSEIDQMATNVGIISKGELIFQSSLAALHQKSSRRIAIRTLDNARAAS  240
             YGMTVL+SSHLLSEIDQ+AT++GII+ GEL+FQ S+  LH+++  +IAI+T +   A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  VLQEQGIGVEMQQNYlllpelddpelARHTMRLFERNVQIVRIEQREKSLEDIFLELTGR  300
            +L+ +G    +Q+ YL + +L D+++A+    L + N+++ RIE++ KSLEDIFLEL  R
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

11) DSY2711 in NC_007907


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  299 bits (1121),  Expect = 9e-83, Method: Compositional matrix adjust.
 Identities = 175/297 (59%), Positives = 235/297 (80%), Gaps = 0/297 (0%)

Query  1    MADIIKTQGLCKHYGKTPGVSDLDLSVAEGAVYGFLGPNGAGKSTTLKMILGLVKPTAGS  60
            M  II+TQ L K+Y K   V D+DL V++GAVYGFLGPNGAGKSTTLKM+LGL KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ITVFGKTMNHRSRMSILKDVGSLIESPSYYGHLSGYENLRIIATLKGTPEKDIGRVLQIV  120
            I ++GK +N+++R+SILKD+GSLIESPSYYGHL+G EN+ I+  L + P K++   L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLENQKNKKTNQYSLGMKQRLGLACALLGNPRLLILDEPTNGLDPAGIQEIRELIRSLPK  180
            RLENQKNKK +QYSLGMKQRLG+A A++  P+LLILDEPTNGLDPAGI+EIRELI+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  EYGITVLVSSHLLSEIEQMATNLGIISKGRLVFQSSLGALHQKSSRSIAIRTLDNHRAAA  240
             YG+TVL+SSHLLSEI+Q+AT++GII+ G LVFQ S+  LH+++   IAI+T +   A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  VLREQGVAVQSQQDYLLLPAFEDGELSRLTLNLCEQKVGVVRIEQREKSLEDIFLEL  297
            +L  +G     Q++YL +  + D++++++   L + +++V RIE++ KSLEDIFLEL
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

12) GYMC10_3916 in NC_013406


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  298 bits (1117),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 191/294 (65%), Positives = 246/294 (84%), Gaps = 1/294 (0%)

Query  6    IVQTQNLSKTYGANNSVNKVDLRVQEGEIYGFLGPNgagktttlkmllglikPTEGTIHI  65
            I++TQ LSK Y     V+ +DLRV +G +YGFLGPNGAGK+TTLKMLLGL KPT+G I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   FGENLS-KHRPSILQRTGSLIESPSYYGHLTGLENMKVMQSLRNVPDKNVHEALRIVRLE  124
            +G +L+ K+R SIL+  GSLIESPSYYGHLTGLENM +MQ L ++P KNV+EAL+IVRLE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  NQKNKKTEQYSLGMKQRLGIAMALLAFPKLLILDEPTNGLDPAGIGEIRELIKSLPERYG  184
            NQKNKK  QYSLGMKQRLGIAMA++ FPKLLILDEPTNGLDPAGI EIRELIKSLPE+YG
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  ITVLLSSHLLSEIEQIATSVGIITQGNLLYQGSMASLRQKNRNAIFMKTGDNAKAEQLLL  244
            +TVL+SSHLLSEI+QIATS+GII +G+L++Q+S+  L+++ ++ I +KT +   A++LL 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  TQGYSPAQSGSRLELGTLQDTEVAEMNRLLVEHKIEVTRIEEQKKSLEDIFLEL  298
            T+GY +   ++ L +  L+D++VA +N +LV+ +I+V RIEE+KKSLEDIFLEL
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

13) Dhaf_3870 in NC_011830


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  298 bits (1116),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 174/297 (59%), Positives = 235/297 (80%), Gaps = 0/297 (0%)

Query  1    MADIIKTQGLCKHYGKTPGVSDLDLSVAEGAVYGFLGPNGAGKSTTLKMILGLVKPTAGS  60
            M  II+TQ L K+Y K   V D+DL V++GAVYGFLGPNGAGKSTTLKM+LGL KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ITVFGKTMNHRSRMSILKDVGSLIESPSYYGHLSGYENLRIIATLKGTPEKDIGRVLEIV  120
            I ++GK +N+++R+SILKD+GSLIESPSYYGHL+G EN+ I+  L + P K++   L IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLENQKNKKTNQYSLGMKQRLGLACALLGNPRLLILDEPTNGLDPAGIQEMRELIRSLPK  180
            RLENQKNKK +QYSLGMKQRLG+A A++  P+LLILDEPTNGLDPAGI+E+RELI+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  EYGITVLVSSHLLSEIEQMATNLGIISKGRLVFQSSLGALHQKSSPSIAIRTLDNHRAAA  240
             YG+TVL+SSHLLSEI+Q+AT++GII+ G LVFQ S+  LH+++ + IAI+T +   A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  VLREQGIAVQCQQDYLLLPAFADGELSRLTLNLFEQKVGVVRIEQREKSLEDIFLEL  297
            +L  +G     Q++YL +  + D++++++   L + +++V RIE++ KSLEDIFLEL
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

14) mrsF in NC_005957


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  298 bits (1117),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 166/294 (57%), Positives = 241/294 (82%), Gaps = 1/294 (0%)

Query  8    IVETEGLTKTYGAVNSVNQLQMQVGKGEIYGFLGPNGAGKTTTIRMLLGLIKPTTGNIKI  67
            I+ T+ L+K Y  +  V++++++V +G +YGFLGPNGAGK+TT++MLLGL KPT GNI+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  68   FNQDLK-TNRIDILREVGSLVESPSYYGHLTGYENLEVIRQMLQVPKKNIDEVLRIVRLE  126
            + ++L+  NRI IL+++GSL+ESPSYYGHLTG EN+ +++++L++PKKN++E L+IVRLE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  127  KQKNKLVKQYSLGMKQRLGIAMALLGNPKLLILDEPTNGLDPAGIQEIRELIKQLPRQYD  186
            +QKNK V QYSLGMKQRLGIAMA++  PKLLILDEPTNGLDPAGI+EIRELIK LP +Y+
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  187  MTVVISSHLLNEMDQIATQVGIINSGQLIFQDKIEVLRKKSQASMKIRVNDVVKAHQILE  246
            MTV+ISSHLL+E+DQIAT +GIIN G+L+FQD I  L++++Q+ + I+ ++VV A+++L+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  247  QHHIHLSIDGNCLVTQQQEDYFISHINDLLVQHNLSVYRIQEEKHTLEEIFLSL  300
                   I++  L  ++  D  ++ IN++LV+ N+ V+RI+E+K +LE+IFL L
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

15) mrsF in NC_014335


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  297 bits (1113),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 166/294 (57%), Positives = 240/294 (82%), Gaps = 1/294 (0%)

Query  5    IVETEGLTKTYGAVNSVNQLQMQVGKGEIYGFLGPNGAGKTTTIRMLLGLIKPTTGNIKI  64
            I+ T+ L+K Y  +  V++++++V +G +YGFLGPNGAGK+TT++MLLGL KPT GNI+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FNQDLK-TNRIDILREVGSLVESPSYYGHLTGYENLEVIRQMLQVPKKNIDEVLRIVRLE  123
            + ++L+  NRI IL+++GSL+ESPSYYGHLTG EN+ +++++L++PKKN++E L+IVRLE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  KQKNKLVKQYSLGMKQRLGIAMALLGNPKLLILDEPTNGLDPAGIQEIRELIKQLPRQYD  183
            +QKNK V QYSLGMKQRLGIAMA++  PKLLILDEPTNGLDPAGI+EIRELIK LP +Y+
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  MTVVISSHLLNEMDQIATQVGIINSGQLIFQDKIEVLRKKSQASMKIRVNDVVKAHQILE  243
            MTV+ISSHLL+E+DQIAT +GIIN G+L+FQD I  L++++Q+ + I+ ++VV A+++L+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  244  QHHIHLSIDGNCLVTQQQEDYFISHINDLLVQHNLSVYRIQEGKHTLEEIFLSL  297
                   I++  L  ++  D  ++ IN++LV+ N+ V+RI+E K +LE+IFL L
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

16) cdd4 in NC_006274


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  291 bits (1089),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 164/294 (56%), Positives = 238/294 (81%), Gaps = 1/294 (0%)

Query  8    IVETEGLTKTHGAVNSVNQLKMQVGKGEIYGFLGPNGAGKTTTIRMLLGLIKPTTGNIKI  67
            I+ T+ L+K    +  V+++ ++V +G +YGFLGPNGAGK+TT++MLLGL KPT GNI+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  68   FNRDLK-TNRIDILREVGSLVESPSYYGHLTGYENLEVIRQMLQVPKKNIDEVLRIVRLE  126
            + ++L+  NRI IL+++GSL+ESPSYYGHLTG EN+ +++++L++PKKN++E L+IVRLE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  127  KQKNKLVKQYSLGMKQRLGIATALLGNPKLLILDEPTNGLDPAGIQEIRELIKQLPRQYD  186
            +QKNK V QYSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI+EIRELIK LP +Y+
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  187  MTVVISSHLLNEMDQIATQVGIINNGQLIFQDKIEVLRKKRQASMKIRVNDVVKAHQILE  246
            MTV+ISSHLL+E+DQIAT +GIIN+G+L+FQD I  L+++ Q+ + I+ ++VV A+++L+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  247  QHHIHLSIDGNCLVTQQQEDYFISHINDLLVQHNLSVYRIQEEKHTLEEIFLSL  300
                   I++  L  ++  D  ++ IN++LV+ N+ V+RI+E+K +LE+IFL L
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

17) bcf_09280 in NC_016779


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  283 bits (1059),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 187/294 (64%), Positives = 248/294 (85%), Gaps = 1/294 (0%)

Query  6    IVQTQNLSKTYGAINCVNKVDLHVQEGEIYGFLGPNgagktttlkmllglikPSEGTIKI  65
            I++TQ LSK Y  I  V+ +DL+V +G +YGFLGPNGAGK+TTLKMLLGL KP++G I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   FGESL-DKNRASILQRTGSLIESPSYYGHLTGLENMKVMQRLRNVPDKNIDEVLRIVRLE  124
            +G  L +KNR SIL+  GSLIESPSYYGHLTGLENM +MQRL ++P KN++E L+IVRLE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  NQKDKKAEQYSLGMKQRLGIAMALLAFPKLLILDEPTNGLDPAGIGEIRELIKSLPERYG  184
            NQK+KK  QYSLGMKQRLGIAMA++ FPKLLILDEPTNGLDPAGI EIRELIKSLPE+YG
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  ITIllsshllsEIEQIATSVGIISEGNLLFQGSMTSLRKKNRNAIFMKTGDNAKAEQLLF  244
            +T+L+SSHLLSEI+QIATS+GII++G+L+FQ+S+  L+++ ++ I +KT +   A++LL 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NQGYSPINNGSRIELGNLQDTEVAEMNKLLVEHEIAVTRIEEQKKSLEDIFLEF  298
             +GY ++ +++ + + NL+D++VA +N +LV+ +I V RIEE+KKSLEDIFLE+
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

18) YBT020_10210 in NC_017200


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  281 bits (1053),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 187/294 (64%), Positives = 249/294 (85%), Gaps = 1/294 (0%)

Query  6    IIQTKNLSKTYGAINCVNKIDLHVQEGEIYGFLGPNgagktttlkmllglikPSEGTIKV  65
            II+T+ LSK Y  I  V+ IDL+V +G +YGFLGPNGAGK+TTLKMLLGL KP++G I++
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   FGESL-QKNRSSILQRTGSLIESPSYYGHLTGLENMKVMQRLRNVPDKNIDEALRIVRLE  124
            +G  L +KNR SIL+  GSLIESPSYYGHLTGLENM +MQRL ++P KN++EAL+IVRLE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  NQKDKKTEQYSLGMKQRLGIAMALLAFPKLLILDEPTNGLDPAGIGEIRELIKSLPARYG  184
            NQK+KK  QYSLGMKQRLGIAMA++ FPKLLILDEPTNGLDPAGI EIRELIKSLP +YG
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  ITIllsshllsEIEQIATSVGIISEGNLLFQGSMTTLRKKSRHAIFMKTGNNIKAEQLLS  244
            +T+L+SSHLLSEI+QIATS+GII++G+L+FQ+S+  L+++++  I +KT N + A++LL+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  AQGYSPINNGKRIELGNLQDKEIAEMNKLLVEHEIAVTRIEEQKKSLEDIFLEF  298
            ++GY ++ ++  + + NL+D ++A +N +LV+ +I V RIEE+KKSLEDIFLE+
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

19) BALH_1667 in NC_008600


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  281 bits (1052),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 186/294 (64%), Positives = 248/294 (85%), Gaps = 1/294 (0%)

Query  12   IVQTQNLSKTYGAINCVNKVDLHVQEGEIYGFLGPNgagktttlkmllglikASEGTIKI  71
            I++TQ LSK Y  I  V+ +DL+V +G +YGFLGPNGAGK+TTLKMLLGL K+++G I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  72   FGESL-DKNRASILQRTGSLIESPSYYGHLTGLENMKVMQRLRNVPDKNIDEVLRIVRLE  130
            +G  L +KNR SIL+  GSLIESPSYYGHLTGLENM +MQRL ++P KN++E L+IVRLE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  131  NQKDKKAEQYSLGMKQRLGIAMALLAFPKLLILDEPTNGLDPAGIGEIRELIKSLPERYG  190
            NQK+KK  QYSLGMKQRLGIAMA++ FPKLLILDEPTNGLDPAGI EIRELIKSLPE+YG
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  191  ITIllsshllsEIEQIATSVGIISEGNLLFQGSMTSLRKKNRNAIFMKTGDNAKAEQLLF  250
            +T+L+SSHLLSEI+QIATS+GII++G+L+FQ+S+  L+++ ++ I +KT +   A++LL 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  251  NQGYSPINNGSRIELGNLQDTEVAEMNKLLVEHEIAVTRIEEQKKSLEDIFLEF  304
             +GY ++ +++ + + NL+D++VA +N +LV+ +I V RIEE+KKSLEDIFLE+
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

20) mrsF in NC_017061


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  278 bits (1039),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 165/296 (56%), Positives = 231/296 (79%), Gaps = 2/296 (0%)

Query  3    DQIVVTHDLTKKYKKHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKGNI  62
            + I+ T+ L+K Y+K   V +++LR+ +G +YGFLGPNGAGK+TT++MLLGL KPT+GNI
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   EIFGQNLN-KNRLQILQRIGSLVESPTYYGNLTGYENLEAVRRLRGLPEQQVNEVLETVR  121
            +I+G++LN KNR+ IL+ IGSL+ESP+YYG+LTG EN+  ++RL +LP ++VNE L  VR
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  122  LSKVANRLTKEYSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIKELP-K  180
            L +  N+   +YSLGMKQRLGIA+A++  P LLILDEPTNGLDP+GI+EIRELIK LP K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  181  SGMSVIVSSHLLSEIDQMATQVGIINNGKMIFQDSIASLHQKRKPLLKVGVSDVIEAKTI  240
             GM+V++SSHLLSEIDQ+AT +GIIN+G ++FQDSI  LH++ ++ + +   +V+ A+ +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  241  LNRKGLKVDLQKNYLWLSQTEPEFVSEINSILLHSGLSVFRLEEKTRSLEDIFLEL  296
            LN KG    +Q  YL + +     V+ IN++L+HS + VFR+EE  +SLEDIFLEL
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

21) bcrA in NC_017912


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  278 bits (1039),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 165/296 (56%), Positives = 231/296 (79%), Gaps = 2/296 (0%)

Query  3    DQIVVTHDLTKKYKKHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKGNI  62
            + I+ T+ L+K Y+K   V +++LR+ +G +YGFLGPNGAGK+TT++MLLGL KPT+GNI
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   EIFGQNLN-KNRLQILQRIGSLVESPTYYGNLTGYENLEAVRRLRGLPEQQVNEVLETVR  121
            +I+G++LN KNR+ IL+ IGSL+ESP+YYG+LTG EN+  ++RL +LP ++VNE L  VR
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  122  LSKVANRLTKEYSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIKELP-K  180
            L +  N+   +YSLGMKQRLGIA+A++  P LLILDEPTNGLDP+GI+EIRELIK LP K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  181  SGMSVIVSSHLLSEIDQMATQVGIINNGKMIFQDSIASLHQKRKPLLKVGVSDVIEAKTI  240
             GM+V++SSHLLSEIDQ+AT +GIIN+G ++FQDSI  LH++ ++ + +   +V+ A+ +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  241  LNRKGLKVDLQKNYLWLSQTEPEFVSEINSILLHSGLSVFRLEEKTRSLEDIFLEL  296
            LN KG    +Q  YL + +     V+ IN++L+HS + VFR+EE  +SLEDIFLEL
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

22) GY4MC1_3912 in NC_014651


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  277 bits (1038),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 155/297 (53%), Positives = 236/297 (80%), Gaps = 1/297 (0%)

Query  1    MEYIVETHNLTKRFGKEIAVNDLNLKIPKGEVYGFLGPNGAGKSTTLRMLLGLMRPTAGS  60
            ME I+ T+ L+K + K + V+D++L++P+G VYGFLGPNGAGKSTTL+MLLGL +PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VRIFGKDLK-KERISILRNVGALVENPSYYSHLTAFENLEAVRKILGAPKEKIDEVLELV  119
            + I+GK+L+ K+RISIL+++G+L+E+PSYY+HLT++EN+  ++++L+ PK +++E L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  RLSKAADKKVNGFSLGMKQRLGIAMALLNDPKLLILDEPTNGLDPSGIIEMRNLIKRLPK  179
            RL +  +KKV+ +SLGMKQRLGIAMA+++ PKLLILDEPTNGLDP+GI E+R+LIK LP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  EKDMTVLLSSHLLAEIDQVATYVGVISKGKLIFQDSIKAMRQKARRKIRLKVSDANNAYH  239
              +MTVL+SSHLL+EIDQ+AT +G+I+ G L+FQDSIK ++++++ +I +K  +  +A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  240  ALLAKGIKTDFRDNVIYLDEQSDEAVAKVVEILVAEGYSVYRVEEEQPSLEDIFLKM  296
             L +KG  + ++D  + +++  D  VAK+  +LV     V+R+EE++ SLEDIFL +
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

23) mrsF in NC_009725


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  276 bits (1032),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 164/296 (56%), Positives = 230/296 (78%), Gaps = 2/296 (0%)

Query  3    DQIVVTHDLTKKYKKHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKGNI  62
            + I+ T+ L+K Y+K   V +++LR+ +G +YGFLGPNGAGK+TT++MLLGL KPT+GNI
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   EIFGQNLN-KNRLQILQRIGSLVESPTYYGNLTAYENLEAVRRLRGLPEQRVNEVLETVR  121
            +I+G++LN KNR+ IL+ IGSL+ESP+YYG+LT+ EN+  ++RL +LP + VNE L  VR
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  122  LSKVANRLTKEYSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIKELP-K  180
            L +  N+   +YSLGMKQRLGIA+A++  P LLILDEPTNGLDP+GI+EIRELIK LP K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  181  SGMSVIVSSHLLSEIDQMATQVGIINNGRMIFQDSIASLHQKRKPLLKVGVSDVIEAKTI  240
             GM+V++SSHLLSEIDQ+AT +GIIN+G ++FQDSI  LH++ ++ + +   +V+ A+ +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  241  LNRKGLKVDLQKNYLWLSQTEPEFVSEINSILLHSGLSVFRLEEKTRSLEDIFLEL  296
            LN KG    +Q  YL + +     V+ IN++L+HS + VFR+EE  +SLEDIFLEL
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

24) bcrA in NC_020410


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  275 bits (1029),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 165/296 (56%), Positives = 228/296 (78%), Gaps = 2/296 (0%)

Query  3    DQIVVTHDLTKKYKKHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKGNI  62
            + I+ T+ L+K Y+K   V +++LR+ +G +YGFLGPNGAGK+TT++MLLGL KPT+GNI
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   EIFGQNLN-KNRLQILQRIGSLVESPTYYGNLTGYENLEAVRRLRGLPEQRVNEVLETVR  121
            +I+G++LN KNR+ IL+ IGSL+ESP+YYG+LTG EN+  ++RL +LP + VNE L  VR
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  122  LSRVANRLTKEYSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIKELP-K  180
            L    N+   +YSLGMKQRLGIA+A++  P LLILDEPTNGLDP+GI+EIRELIK LP K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  181  SGMSVIVSSHLLSEIDQMATQVGIINNGRTIFQDSIASLHQKRKPLLKVGVSDVIEAKTI  240
             GM+V++SSHLLSEIDQ+AT +GIIN+G  +FQDSI  LH++ ++ + +   +V+ A+ +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  241  LNRKGLKVDLQKNYLWLSQTEPEFVSEINSILLHSGLSVFRLEEKTRSLEDIFLEL  296
            LN KG    +Q  YL + +     V+ IN++L+HS + VFR+EE  +SLEDIFLEL
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

25) GTNG_1960 in NC_009328


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  275 bits (1027),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 162/297 (55%), Positives = 232/297 (79%), Gaps = 1/297 (0%)

Query  1    MEYIVETHHLTKRFGKEIAVNALNLKIPRGEVYGFLGPNGAGKSTTLRMLLGLMRPTAGS  60
            ME I+ T++L+K + K + V+ ++L++P+G VYGFLGPNGAGKSTTL+MLLGL +PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IRIFGKDLK-KERISILRNVGSLVESPSYYSHLTAYENLEAMRKILGSPKEKIDEVLDLV  119
            I I+GK+L+ K+RISIL+++GSL+ESPSYY+HLT+ EN+  M+++L+ PK +++E L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  RLSNAADKKVKGFSLGMKQRLGIAMALLNDPKLLILDEPTNGLDPSGIIEMRNLIKRLPK  179
            RL N  +KKV  +SLGMKQRLGIAMA+++ PKLLILDEPTNGLDP+GI E+R+LIK LP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  EKDITVLISSHLLSEIDQVATYVGVISKGKLIFQDSIKAMRNKAQLKIRLKVSDANNAYR  239
              ++TVLISSHLLSEIDQ+AT +G+I+ G L+FQDSIK ++N++Q +I +K  +  +A +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  240  SLLAKGIKTHYQDHIIYLYEQSDEAVAAVVETLVDEGYSVYRVEEEHQSLEDIFLKM  296
             L +KG  +  QD  + + +  D  VA +   LV+    V+R+EE+ +SLEDIFL +
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

26) SAIN_0924 in NC_022244


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  274 bits (1025),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 154/297 (52%), Positives = 244/297 (83%), Gaps = 4/297 (1%)

Query  5    IVETNQLSKDFSGEVAVNQLSIHIRKNEIYGFLGPNGAGKSTAMKMLLGLLQPTYGSIKL  64
            I+ T++LSK+++    V+++ +++ +  +YGFLGPNGAGKST++KMLLGL +PT G+I++
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKTFN-SNQISLLSNVGSLIEEPSYYANLTGYENLEIIQKLLKLPKRNIDEVLKIVKLF  123
            +GK +N  N+IS+L ++GSLIE PSYY++LTG EN+ I+Q+LL LPK+N++E LKIV+L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  DQKDKLVKNYSLGMKQRLGIALAIVKFPKLLILDEPTNGLDPAGIQEIRELIKSLPQKYD  183
            +QK+K V +YSLGMKQRLGIA+AI+KFPKLLILDEPTNGLDPAGI+EIRELIKSLP+KY+
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  MTIIVSSHILSEIEQMATTVGIINHGQLLFEGHLSDLEE--DEKYLFETSDDVTAKRILM  241
            MT+++SSH+LSEI+Q+AT++GIINHG+L+F++ + +L++  + +  + T + V+A+++L 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  242  FNGF-NLDDDKKLIVNDNDKVNIATAIRLLVENDVDIYQVRMIRRSLEDVFLDMTGR  297
             +G+ +L +D  L +++    ++A    +LV++++D++++   ++SLED+FL++  R
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

27) Bsph_4477 in NC_010382


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  273 bits (1022),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 156/297 (53%), Positives = 229/297 (78%), Gaps = 1/297 (0%)

Query  9    LEYIVQTQNLSKNFGKEQAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGLMKPSSGT  68
            +E I++TQ LSK++ K   V +I+L++ +G +YGFLGPNGAGK+TT++MLLGL KP+ G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  69   IKIFQKDIV-KDRIQILANVGSLVENPSYYPHLTAYENLEALRKILGVPKTRIDEVLQTV  127
            I+I+ K++  K+RI IL ++GSL+E+PSYY HLT+ EN+  ++++L++PK  ++E L+ V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  128  RLKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIEIRNLIKRLPK  187
            RL +  NKKV  +SLGMKQRLGIA A++  P LLILDEPTNGLDP+GI EIR+LIK LP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  188  EYGMTIIISSHLLSEIDQMATQVGIVSKGTLIFQDSIEGMRKFAQPKVTFKVSNGEKGWR  247
             YGMT++ISSHLLSEIDQ+AT +GI++ G L+FQDSI  +++ +Q+++++K  N   + +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  248  SLLANGIKANYQDDVIFLEECSDEKVAHIVQVLVQEGISVFRVEEEKRSLEDIFLQM  304
             L ++G  +  QD+ + +E+  D  VA I  +LV+  I VFR+EE+K+SLEDIFL++
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

28) Curi_c27460 in NC_018664


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  272 bits (1018),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 170/302 (57%), Positives = 233/302 (78%), Gaps = 5/302 (1%)

Query  1    MSTIIKTSNLSKVFSNQMKSVNDLSISVKEGEIYGFLGSNGAGKSTTMKMLLGLMKPSGG  60
            M  II+T  LSK +++  + V+D+ + V +G +YGFLG+NGAGKSTT+KMLLGL KP+ G
Sbjct  1    MEMIIRTQRLSKEYNKIFR-VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQG  59

Query  61   IIEIFQKNLAENTD-SILFNTGSLIEEPSYYGNLTGYENLEIMQKLLNFPKSNINEALEI  119
             I+I+ K+L E+   SIL + GSLIE PSYYG+LTG EN+ IMQ+LL++PK N+NEAL I
Sbjct  60   NINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKI  119

Query  120  VRLEKHKNKLVKNYSLGMKQRLGIALAIVKFPKLLILDEPTNGLDPAGIQEMRELIRSLP  179
            VRLE++KNK V +YSLGMKQRLGIA+AI+KFPKLLILDEPTNGLDPAGI+E+RELI+SLP
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  RKYGMTVMISSHLLSEIEQIATTVGIIDQGKLIYEGSLSNLEDDG--SILIKVNNPIDAR  237
             KYGMTV+ISSHLLSEI+QIAT++GII++G L++++S+ +L++ G   I IK +N + A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  238  KTLikesykiieikeNDLILPIYSNDHISKIIKCLVKNEISIYEVKKIKKSLENIFLEIT  297
            K L   +Y  +      L +    + +++KI   LV ++I ++ +   KKSLE+IFLE+ 
Sbjct  240  KLLNTKGYMSLIQDGY-LTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

Query  298  SR  299
             R
Sbjct  299  VR  300

29) bcrA in NC_017768


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  268 bits (1003),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 155/297 (53%), Positives = 237/297 (80%), Gaps = 4/297 (1%)

Query  5    IIETKQLSKNFSGEAAVNQLSIHVRKNEIYGFLGPNGAGKSTAMKMLLGLLQPTHGSIRL  64
            II T++LSK+++    V+++ ++V +  +YGFLGPNGAGKST++KMLLGL +PT+G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FDKNF-DSNQIALLSSVGSLIEEPSYYANLTGYENLEIIQRLLKLPKENIDKVLKIVKLY  123
            ++K++ + N+I++L  +GSLIE PSYY++LTG EN+ I+QRLL LPK N++  LKIV+L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  EQKDKLVKNYSLGMKQRLGIALAIIKFPKLLILDEPTNGLDPAGIQEIRELIKSLPQKYD  183
            +QK+K V +YSLGMKQRLGIA+AI+KFPKLLILDEPTNGLDPAGI+EIRELIKSLP+KY+
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  MTVIISSHILSEIEQMATTVGIINKGKLLFEGQLTELEE--DEKYLFETSDDALAEQLLM  241
            MTV+ISSH+LSEI+Q+AT++GIIN G L+F++ + EL++  + +  + T +   A++LL 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  242  RKGF-ELEENQSIVLKDYNKTNIAAAVKVLVANDIDIYQVRMVRKSLEEVFLDMTGR  297
             KG+  L ++  + + + + +++A    +LV ++ID++++   +KSLE++FL++  R
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

30) SMUGS5_05100 in NC_018089


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  268 bits (1001),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 154/297 (52%), Positives = 237/297 (80%), Gaps = 4/297 (1%)

Query  5    IIEAKQLSKNFSGEAAVNQLSIHVRKNEIYGFLGPNGAGKSTAMKMLLGLLQPTHGSIRL  64
            II +++LSK+++    V+++ ++V +  +YGFLGPNGAGKST++KMLLGL +PT+G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FDKNF-DSNQIALLSSVGSLIEEPSYYANLTGYENLEIIQRLLKLPKENIDKVLKIVKLY  123
            ++K++ + N+I++L  +GSLIE PSYY++LTG EN+ I+QRLL LPK N++  LKIV+L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  EQKDKLVKNYSLGMKQRLGIALAIIKFPKLLILDEPTNGLDPAGIQEIRELIKSLPQKYD  183
            +QK+K V +YSLGMKQRLGIA+AI+KFPKLLILDEPTNGLDPAGI+EIRELIKSLP+KY+
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  MTVIISSHILSEIEQMATTVGIINKGKLLFEGQLTELEE--DEKYLFETSDDALAEQLLM  241
            MTV+ISSH+LSEI+Q+AT++GIIN G L+F++ + EL++  + +  + T +   A++LL 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  242  RKGF-ELEENQSIVLKDYNKANIAAAVKVLVANDIDIYQVRMVRKSLEEVFLDMTGR  297
             KG+  L ++  + + + + +++A    +LV ++ID++++   +KSLE++FL++  R
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

31) HN6_01167 in NC_017481


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  267 bits (998),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 152/297 (52%), Positives = 243/297 (82%), Gaps = 4/297 (1%)

Query  5    IVETNQLSKDFSGEVAVNQLSIHIRKNEIYGFLGPNGAGKSTAMKMLLGLLQPSHGSIKL  64
            I+ T++LSK+++    V+++ +++ +  +YGFLGPNGAGKST++KMLLGL +P++G+I++
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKTFN-SNQISLLSNVGSLIEEPSYYANLTGYENLEIIQKLLKLPKRNIDEVLKIVKLF  123
            +GK +N  N+IS+L ++GSLIE PSYY++LTG EN+ I+Q+LL LPK+N++E LKIV+L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  DQKDKLVKNYSLGMKQRLGIALAIVKFPKLLILDEPTNGLDPAGIQEIRELIKSLPQKYD  183
            +QK+K V +YSLGMKQRLGIA+AI+KFPKLLILDEPTNGLDPAGI+EIRELIKSLP+KY+
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  MTIIVSSHILSEIEQMATTVGIVNHGQLLFEGHLSDLEE--DEKYLFETSDDVTAKRILM  241
            MT+++SSH+LSEI+Q+AT++GI+NHG+L+F++ + +L++  + +  + T + V+A+++L 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  242  FNGFnlddnkkliindnnkdniATAIR-LLVENDVDIYQVCMIRRSLEDVFLDMTGR  297
             +G+    +   +  +N KD+  + I  +LV++++D++++   ++SLED+FL++  R
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

32) LSL_1384 in NC_007929


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  267 bits (998),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 152/297 (52%), Positives = 243/297 (82%), Gaps = 4/297 (1%)

Query  5    IVETNQLSKDFSGEVAVNQLSIHIRKNEIYGFLGPNGAGKSTAMKMLLGLLQPSHGSIKL  64
            I+ T++LSK+++    V+++ +++ +  +YGFLGPNGAGKST++KMLLGL +P++G+I++
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKTFN-SNQISLLSNVGSLIEEPSYYANLTGYENLEIIQKLLKLPKRNIDEVLKIVKLF  123
            +GK +N  N+IS+L ++GSLIE PSYY++LTG EN+ I+Q+LL LPK+N++E LKIV+L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  DQKDKLVKNYSLGMKQRLGIALAIVKFPKLLILDEPTNGLDPAGIQEIRELIKSLPQKYD  183
            +QK+K V +YSLGMKQRLGIA+AI+KFPKLLILDEPTNGLDPAGI+EIRELIKSLP+KY+
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  MTIIVSSHILSEIEQMATTVGIVNHGQLLFEGHLSDLEE--DEKYLFETSDDVTAKRILM  241
            MT+++SSH+LSEI+Q+AT++GI+NHG+L+F++ + +L++  + +  + T + V+A+++L 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  242  FNGFnlddnkkliindnnkdniATAIR-LLVENDVDIYQVCMIRRSLEDVFLDMTGR  297
             +G+    +   +  +N KD+  + I  +LV++++D++++   ++SLED+FL++  R
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

33) bcrA1 in NC_017542


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  266 bits (996),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 144/299 (49%), Positives = 234/299 (79%), Gaps = 1/299 (0%)

Query  6    ESIIETNSLSKIYKGRAAVNQLDLKIARGDIYGFLGPNGAGKTTTIRMLLGLIRPTRGTI  65
            E II T+ LSK Y+    V+++DL++++G +YGFLGPNGAGK+TT++MLLGL +PT+G I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  66   RIFGKDIR-RHRLDILRKVGSLVEYPSYYGHLNAVENLEAIRRILNVPKENIAEVLEVVR  124
             I+GK++  ++R+ IL+ +GSL+E PSYYGHL ++EN+  ++R+L++PK N+ E L +VR
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  125  LTKHAKRPVKGYSLGMKQRLGIAAALLGNPEVLILDEPTNGLDPEGIQEMRELIQAMPKQ  184
            L ++ ++ V  YSLGMKQRLGIA A++  P +LILDEPTNGLDP GI+E+RELI+++P +
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  185  RGITVLVSSHLLSEVEHMANTVGIIREGQLVFQNTIHNLRQESAGGIRIVVSEPEAAQLI  244
             G+TVL+SSHLLSE++++A ++GII +G+LVFQ++I +L++ + + I I   +  +AQ +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  245  AREQGYHSVKDGSALDFDNMNDAAVALLVRRLVENTHAVYRVEERRKSLEDMFMQVVGK  303
               +GY S+ +++ L ++N++D+ VA +   LV++   V+R+EE++KSLED+F++++ +
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

34) PPSC2_c0482 in NC_014622


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  266 bits (995),  Expect = 8e-73, Method: Compositional matrix adjust.
 Identities = 144/299 (49%), Positives = 234/299 (79%), Gaps = 1/299 (0%)

Query  3    ESIIETNSLSKIYKGRAAVNQLDLKIARGDIYGFLGPNGAGKTTTIRMLLGLIRPTRGTI  62
            E II T+ LSK Y+    V+++DL++++G +YGFLGPNGAGK+TT++MLLGL +PT+G I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   RIFGKDIR-RHRLDILRKVGSLVEYPSYYGHLNAVENLEAIRRILNVPKENIAEVLEVVR  121
             I+GK++  ++R+ IL+ +GSL+E PSYYGHL ++EN+  ++R+L++PK N+ E L +VR
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  122  LTKHAKRPVKGYSLGMKQRLGIAAALLGNPEVLILDEPTNGLDPEGIQEMRELIQAMPKQ  181
            L ++ ++ V  YSLGMKQRLGIA A++  P +LILDEPTNGLDP GI+E+RELI+++P +
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  182  RGITVLVSSHLLSEVEHMANTVGIIREGQLVFQNTIHNLRQESAGGIRIVVSEPEAAQLI  241
             G+TVL+SSHLLSE++++A ++GII +G+LVFQ++I +L++ + + I I   +  +AQ +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  242  AREQGYHSVKDGSALDFDNMNDAAVALLVRRLVENTHAVYRVEERRKSLEDMFMQVVGK  300
               +GY S+ +++ L ++N++D+ VA +   LV++   V+R+EE++KSLED+F++++ +
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

35) Olsu_0635 in NC_014363


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  266 bits (995),  Expect = 9e-73, Method: Compositional matrix adjust.
 Identities = 146/298 (49%), Positives = 226/298 (76%), Gaps = 5/298 (1%)

Query  18   GLAIATDGLTKRYGDATVVSNLNLEVSEGAVYGFLGPNGAGKSTTMKMILGLAHPTGGSI  77
             + I T+ L+K Y     V +++L V++GAVYGFLGPNGAGKSTT+KM+LGLA PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  78   QVLGREMGPSNRLEVLRQVGSIIEGPSCYPHLTAYENLDIVRRLRGLPTSCIDEALEVVR  137
            ++LG+E+   NR+ +L+++GS+IE+PS Y HLT+ EN+ I++RL +LP   ++EAL +VR
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  138  LNDPKTRRKVVGQFSLGMRQRLGIASALVGRPRLLLLDEPTNGLDPSGIHEIRQLIRDMP  197
            L++ K ++  V+Q+SLGM+QRLGIA A++  P+LL+LDEPTNGLDP+GI+EIR+LI+ +P
Sbjct  122  LENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  198  NRFGCTVMVSSHLLSEIDQMADHVGIINSGQMVWQGPIAELHARARRWIALRTTDNatal  257
            +++G TV++SSHLLSEIDQ+A  +GIIN G++V Q++I ELH R++  IA++T +  +A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  258  raltg---atadtNGWLRIKAVDDATAGQVSLCLARQGVGIVRMEERSQSLEDIFLQL  312
            + L      +   +G L I  + D+  ++++  L +  +++ R+EE+ +SLEDIFL+L
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

36) ccmA3 in NC_017542


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  264 bits (987),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 157/300 (53%), Positives = 232/300 (78%), Gaps = 10/300 (3%)

Query  5    VIRTRQLTRRFGKREFVKQINLQVPGKQIYGFLGPNGAGKTTTIRMLLGLIKSTSGDIEI  64
            +IRT++L++ + K   VK+I+L+VP   +YGFLGPNGAGK+TT++MLLGL K+T G+I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKKLKD-HRMEILKDVGSLVESPAYYAHLSAYRNLEIVTTMRGLPTRKIHKVLDLVRLS  123
            +GK L++ +R+ ILKD+GSL+ESP+YY+HL++  N+ I+  + +LP ++++  L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  KDAYRPVKGYSLGMRQRLGIAMALIADPKLLILDEPTNGLDPSGIQEIRELIMSLPDAYG  183
            ++  + V  YSLGM+QRLGIAMA++  PKLLILDEPTNGLDP+GI+EIRELI SLP+ YG
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  MTVLVSSHLLSEIEQIATYVGIINQGEMIFQGTMKELTDKSKPQLFIETQNPVQAAGALM  243
            MTVL+SSHLLSEI+QIAT +GIIN+GE++FQ+++KEL +++++Q+ I T+N V A   L 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  244  QHGWIAGAESMEQKEVITPIVDREQSSEMIKV---LVEHNHPVYRVREKKKTLEEIFLEL  300
              G +    S+ Q   +T  ++  + S++ K+   LV+ N  V+R+ E KK+LE+IFLEL
Sbjct  244  TKGYM----SLIQDGYLT--IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

37) PPSC2_c1559 in NC_014622


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  264 bits (987),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 157/300 (53%), Positives = 232/300 (78%), Gaps = 10/300 (3%)

Query  5    VIRTRQLTRRFGKREFVKQINLQVPGKQIYGFLGPNGAGKTTTIRMLLGLIKSTSGDIEI  64
            +IRT++L++ + K   VK+I+L+VP   +YGFLGPNGAGK+TT++MLLGL K+T G+I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKKLKD-HRMEILKDVGSLVESPAYYAHLSAYRNLEIVTTMRGLPTRKIHKVLDLVRLS  123
            +GK L++ +R+ ILKD+GSL+ESP+YY+HL++  N+ I+  + +LP ++++  L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  KDAYRPVKGYSLGMRQRLGIAMALIADPKLLILDEPTNGLDPSGIQEIRELIMSLPDAYG  183
            ++  + V  YSLGM+QRLGIAMA++  PKLLILDEPTNGLDP+GI+EIRELI SLP+ YG
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  MTVLVSSHLLSEIEQIATYVGIINQGEMIFQGTMKELTDKSKPQLFIETQNPVQAAGALM  243
            MTVL+SSHLLSEI+QIAT +GIIN+GE++FQ+++KEL +++++Q+ I T+N V A   L 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  244  QHGWIAGAESMEQKEVITPIVDREQSSEMIKV---LVEHNHPVYRVREKKKTLEEIFLEL  300
              G +    S+ Q   +T  ++  + S++ K+   LV+ N  V+R+ E KK+LE+IFLEL
Sbjct  244  TKGYM----SLIQDGYLT--IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

38) PPE_00449 in NC_014483


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  262 bits (978),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 142/297 (48%), Positives = 233/297 (79%), Gaps = 1/297 (0%)

Query  5    IIETNSLSKIYKGRAAVNQLDLKIARGDIYGFLGPNGAGKTTTIRMLLGLIRPTRGTIRI  64
            II T+ LSK Y+    V+++DL++++G +YGFLGPNGAGK+TT++MLLGL +PT+G I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKDIR-RHKLDILRKVGSLVEYPSYYGHLNAIENLEAIRRILNVSKQNIAEVLEVVRLT  123
            +GK++  ++++ IL+ +GSL+E PSYYGHL ++EN+  ++R+L+++K+N+ E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  KHAKRPVKGYSLGMKQRLGIAAALLGNPEVLILDEPTNGLDPEGIQEMRTLIQAMPKQRG  183
            ++ ++ V  YSLGMKQRLGIA A++  P +LILDEPTNGLDP GI+E+R LI+++P + G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  ITVLVSSHLLSEVEHMANTVGIIREGELVFQNTIHNLRQESAGGIRIVVSEPEAAQLIAR  243
            +TVL+SSHLLSE++++A ++GII +GELVFQ++I +L++ + + I I   +  +AQ +  
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  244  EQGYHSVKDGSALDFENMNDATVALLVRRLVENTHAVYRVEERRKSLEDMFMQVVGK  300
             +GY S+ +++ L +EN++D+ VA +   LV++   V+R+EE++KSLED+F++++ +
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

39) PPE_01449 in NC_014483


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  261 bits (977),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 157/300 (53%), Positives = 228/300 (76%), Gaps = 10/300 (3%)

Query  5    VIHTQQLTRRFGKREFVKRINLQVPGQQIYGFLGPNGAGKTTTIRMLLGLIKSTSGEIEI  64
            +I+TQ+L++ + K   VK I+L+VP   +YGFLGPNGAGK+TT++MLLGL K+T G+I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKKLKD-QRMEILKDIGSLVESPAYYAHLSAYRNLEIVTTMRGLPTRRIHEVLDLVRLT  123
            +GK L++ +R+ ILKDIGSL+ESP+YY+HL++  N+ I+  + +LP + ++E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  KDAYRPVKGYSLGMRQRLGIAMALIANPKLLILDEPTNGLDPSGIQEIRELIMSLPGAYG  183
            ++  + V  YSLGM+QRLGIAMA++  PKLLILDEPTNGLDP+GI+EIRELI SLP  YG
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  MTVLVSSHLLSEIEQIATYVGIINQGEMIFQGTMKELTAKSKPQLFIETPDPVLAAGALI  243
            MTVL+SSHLLSEI+QIAT +GIIN+GE++FQ+++KEL  ++++Q+ I T + V A   L 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  244  QHGWTAGTESIEQNEVVTPIVDRQQSSEMIKV---LVEHNHPIYRVTEKKKTLEEIFLEL  300
              G      S+ Q+  +T  ++  + S++ K+   LV+ N  ++R+ E KK+LE+IFLEL
Sbjct  244  TKGYM----SLIQDGYLT--IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

40) HPL003_09890 in NC_016641


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  261 bits (976),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 143/297 (49%), Positives = 230/297 (78%), Gaps = 1/297 (0%)

Query  5    IIETNGLSKIYKGRPAVNQLDLKIGREDIYGFLGPNGAGKTTTIRMLLGLIRPTRGTIRI  64
            II T+ LSK Y+    V+++DL++ +  +YGFLGPNGAGK+TT++MLLGL +PT+G I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKDIR-RHKLDILRKVGSLVEYPSYYGHLNAVENLEAIRRILNVPKENIAEVLEVVRLT  123
            +GK++  ++++ IL+ +GSL+E PSYYGHL ++EN+  ++R+L++PK N+ E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  KHAKRPVKGYSLGMKQRLGIAAALLGNPELLILDEPTNGLDPEGIQEMRALIQAMPKERG  183
            ++ ++ V  YSLGMKQRLGIA A++  P LLILDEPTNGLDP GI+E+R LI+++P   G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  ITVLVSSHLLSEVEHMANTVGIIREGELVFQNTIHNLRQESAGGIRIVTSDPETAQLIAR  243
            +TVL+SSHLLSE++++A ++GII +GELVFQ++I +L++ + + I I T +  +AQ +  
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  244  EQGYHSVRDGAALDFENMNDAAVALLVRRLVENTHAIYRVEERRKSLEDMFMQVVGK  300
             +GY S+ +++ L +EN++D+ VA +   LV++   ++R+EE++KSLED+F++++ +
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

41) BaLi_c01810 in NC_021362


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  261 bits (976),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 151/294 (52%), Positives = 233/294 (80%), Gaps = 1/294 (0%)

Query  7    ILETRQLTKTYRKTDVVKNVNLCIQEGEIYGFLGPNGAGKTTTIRMLLGLINPTKGETRI  66
            I+ T++L+K Y K   VK+++L + +G +YGFLGPNGAGK+TT++MLLGL +PT+G+  I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  67   FGKDLK-SNRLDILRNVGSLVESPSYYPHLTGEENLEAIRKILNVPKSNIDDVLEMVRLT  125
            +GK+L+  NR+ IL+++GSL+ESPSYY HLTG EN+  ++++L++PK N+++ L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  126  KMADKKAGEYSLGMKQRLGIAAALLGYPKLVILDEPTNGLDPAGileirelilrlPSDYG  185
            +  +KK ++YSLGMKQRLGIA A++ +PKL+ILDEPTNGLDPAGI EIRELI  LP  YG
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  186  ITVMISSHLLSEIEQVATQVGIIANGEMLFQDAIGELRSKADTKIVFSTSDTDGALDIFS  245
            +TV+ISSHLLSEI+Q+AT +GII +GE++FQD+I EL+++++++I + T +  +A  +++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  246  REGVEAVKTQRGLMIEDRTDMEISRLARKLFENEIDIFRIYDESKSLEDIFLDM  299
              G  ++  +  L IE+  D +++++   L +++ID+FRI ++ KSLEDIFL++
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

42) BCZK2403 in NC_006274


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  255 bits (952),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 145/275 (53%), Positives = 221/275 (81%), Gaps = 1/275 (0%)

Query  24   NLKIPEGEIYGFLGPNGAGKTTSIRMLLGLIKATEGNVTIFGEDLN-KNRLSILSDVGAL  82
            +L++P+G +YGFLGPNGAGK+T+++MLLGL K+T+GN+ I+G +LN KNR+SIL D+G+L
Sbjct  24   DLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSL  83

Query  83   VENPSYYAHLNAIENLEVYRLLRNIPKEKLHSVLKTVGLQNAAHQKVKEYSLGMKQRLGL  142
            +E+PSYY+HL ++EN+ + + L ++PK +++  LK V L+N  ++KV +YSLGMKQRLG+
Sbjct  84   IESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGI  143

Query  143  AIALLGDPRLLILDEPTNGLDPQGIHEMRELIKSLAKERGITILVSSHLLSEIDQMATYV  202
            A+A++  P+LLILDEPTNGLDP GI+E+RELIKSL+   G+T+L+SSHLLSEIDQ+AT +
Sbjct  144  AMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSI  203

Query  203  GIISKGRLIFQDKIEILRQHSHNSIKILVNKPKEAWKIILASGIPSVVEEDKIIISNTDN  262
            GII+ G L+FQD I  L++++++ I I  ++   A K++ + G  S+++++ + I N  +
Sbjct  204  GIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKD  263

Query  263  TAIAKIVKALVANDISVFRIEEEKNSLEDIFLNIV  297
            + +AKI   LV ++I VFRIEE+K+SLEDIFL+++
Sbjct  264  SDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

43) CLJU_c13790 in NC_014328


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  254 bits (947),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 153/296 (52%), Positives = 225/296 (77%), Gaps = 6/296 (2%)

Query  5    ILQTKNLTKNFKDFKAVKGIDLSIKKGRVYGFLGPNGAGKSTTIRMLLGLIKPTKGEVKI  64
            I++T+ L+K+++ +  VK+IDL + +G VYGFLGPNGAGKSTT++MLLGL KPT+G+++I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKDLR-KNRMSILKKIGSMVEAPSYYGNLTAYENLQVTAELLELDHKYIDEVLKVVKLT  123
            +GK+L  KNR+SILK IGS++E+PSYYG+LT+ EN+ +   LL+L  K ++E LK+V+L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  EWKDRQASKFSLGMKQRLGIAQALISKPELLILDEPTNGLDPSGIHEIRGLIKELPKLYN  183
            + K+++ S++SLGMKQRLGIA A++  P LLILDEPTNGLDP+GI+EIR LIK LP  Y 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  MTVIISSHNLSEIELIADDIGIINRGKMLFQGTLEELHSKSKGQICIESKDLKKLEGTLN  243
            MTV+ISSH LSEI+ IA  IGIIN+G ++FQ+++ ELH+++++QI I +K++   +  LN
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  244  NSGYKYKVRDKDIFLEPEG---RELDEILKQLILNGNRIFKFVEVQKSLEEIFLDL  296
              GY   ++D   +L  E     ++  I   L+ +   +F++ E +KSLE+IFL+L
Sbjct  244  TKGYMSLIQDG--YLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

44) GYMC10_0615 in NC_013406


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  251 bits (939),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 140/297 (48%), Positives = 229/297 (78%), Gaps = 1/297 (0%)

Query  3    ELVIQTKGLYKIYKKRAAVVDLNLEIARGDIYGFLGPNGAGKTTTIRMLLGLIQPTRGAI  62
            E++I+T+ L K Y+K   V D++L +++G +YGFLGPNGAGK+TT++MLLGL +PT+G I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   HLFGKDLKS-EKMDILRRTGSLVEYPSYYGHLTAVENLEAIRRITGGPKSRIAEVLEMVS  121
            +++GK+L+  +++ IL+  GSL+E PSYYGHLT++EN+  ++R+ + PK  + E L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  122  LTKEAKRPVKGYSLGMKQRLGIAAALLNNPELLILDEPTNGLDPSGIHEIRELIKNMPRQ  181
            L ++ ++ V  YSLGMKQRLGIA A+++ P LLILDEPTNGLDP+GI+EIRELIK++P +
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  182  YGITVLVSSHLLGEVEQMADKVGIIREGRMVFQDTIDNLVSTASSGFRLSVSEPEAALGL  241
            YG+TVL+SSHLL+E++Q+A  +GII +G +VFQD+I +L + + S + +   +  +A  L
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  242  ALDLGCEGVLRNQMLELESMQDAKIAQLVKRLVENQHAVYRVEEQRRSLEDIFMQIV  298
                G  +++++  L +E+++D+ +A++   LV+++  V+R+EE+++SLEDIF++++
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

45) BH0445 in NC_002570


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  249 bits (931),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 143/294 (49%), Positives = 224/294 (77%), Gaps = 1/294 (0%)

Query  7    LIETNNLTMTYKHVHAVDRINLKVKEGEIYGFLGPNGAGKTTTIRMLLGLIKASHGSIKI  66
            +I T+ L+  Y+ +  V  I+L+V +G +YGFLGPNGAGK+TT++MLLGL K+++G+I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  67   FGKDLKQ-HRLDILKNIGALVESPSYYPHLSGEDNLETVRKIVKVPKSRIAEVLELVRLT  125
            +GK+L++ +R+ ILK+IG+L+ESPSYY HL+G +N+  +++++ +PK  + E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  126  KVADRKVQEYSLGMKQRLAIAAALLANPRLVILDEPTNGLDPAGIIEIRNLILRLPKEYG  185
            +  ++KV +YSLGMKQRL+IA A++  P+L+ILDEPTNGLDPAGI EIR+LI  LP  YG
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  186  ITVllsshllsEVEQVASQVGIIAKGKLIFQDSIEELRKKANRKIFLSTSHPEVAATILQ  245
            +TVL+SSHLLSE++Q+A+ +GII  G L+FQDSI EL+++++ +I + T +   A  +L+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  246  ERGINVDTQARGLVMNDRSDEEIAQLVKAFVEKDIDVYRISDETSSLEEIFLQL  299
             +G     Q   L +++  D ++A++   +V+ +IDV+RI ++  SLE+IFL+L
Sbjct  244  TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

46) CKL_3047 in NC_009706


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  245 bits (913),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 152/294 (52%), Positives = 222/294 (76%), Gaps = 2/294 (0%)

Query  3    EKIIETKNLTKEFKDFKAVDKLSLTVKKGRVYGFLGPNGAGKSTTIRMLLGLITPTKGQI  62
            E II T+ L+KE++ +  V  + L V +G VYGFLGPNGAGKSTT++MLLGL  PT+G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   KIFDKNLKE-NRLTILRKIGSLVESPSYYGNLTAYENLEVTAKLLELDYKYIDEVLDFVK  121
            +I++K+L+E NR++IL+ IGSL+ESPSYYG+LT+ EN+ +  +LL+L  K ++E L +V+
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  122  LTEWKDRQCKKFSLGMKQRLGIAQALISKPELLILDEPTNGLDPSGIHEIRELIKNLPKI  181
            L + K+++  ++SLGMKQRLGIA A++  P LLILDEPTNGLDP+GI+EIRELIK+LP  
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  182  YNMTVIISSHNLSEIELTADDIGIINRGNMLFQGTLEELHSRSKGEICIGVKDLKKAAHT  241
            Y MTV+ISSH LSEI+  A  IGIIN+G+++FQ+++ ELH+R++++I I  K++  A   
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  242  LNDHGYKYKIKDDDIFVKPL-EVEPYEILKQLILNDNRVFKFIEVQKSLEEIFL  294
            LN  GY   I+D+ + +  L + +   I   L+ ++  VF++ E +KSLE+IFL
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

47) CKR_2692 in NC_011837


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  245 bits (913),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 152/294 (52%), Positives = 222/294 (76%), Gaps = 2/294 (0%)

Query  3    EKIIETKNLTKEFKDFKAVDKLSLTVKKGRVYGFLGPNGAGKSTTIRMLLGLITPTKGQI  62
            E II T+ L+KE++ +  V  + L V +G VYGFLGPNGAGKSTT++MLLGL  PT+G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   KIFDKNLKE-NRLTILRKIGSLVESPSYYGNLTAYENLEVTAKLLELDYKYIDEVLDFVK  121
            +I++K+L+E NR++IL+ IGSL+ESPSYYG+LT+ EN+ +  +LL+L  K ++E L +V+
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  122  LTEWKDRQCKKFSLGMKQRLGIAQALISKPELLILDEPTNGLDPSGIHEIRELIKNLPKI  181
            L + K+++  ++SLGMKQRLGIA A++  P LLILDEPTNGLDP+GI+EIRELIK+LP  
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  182  YNMTVIISSHNLSEIELTADDIGIINRGNMLFQGTLEELHSRSKGEICIGVKDLKKAAHT  241
            Y MTV+ISSH LSEI+  A  IGIIN+G+++FQ+++ ELH+R++++I I  K++  A   
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  242  LNDHGYKYKIKDDDIFVKPL-EVEPYEILKQLILNDNRVFKFIEVQKSLEEIFL  294
            LN  GY   I+D+ + +  L + +   I   L+ ++  VF++ E +KSLE+IFL
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

48) HMPREF9154_0387 in NC_018142


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  243 bits (907),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 145/298 (49%), Positives = 218/298 (74%), Gaps = 4/298 (1%)

Query  1    MSYAVTTENLTKRYGDRIVVDDLSLRIPEGCVYGFLGPNGAGKSTTMKMLLSLIEPSDGE  60
            M   + T+ L+K Y   + V D+ LR+P+G VYGFLGPNGAGKSTT+KMLL+L  P++G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VQILGQSMTRATRRSLLGRIGSLIEAPPGYAHLTGAENMRLIQRLLHLDDAQIEHAVQVV  120
            ++ILG+ +    R S+L  IGSLIE+P+ Y+HLTG ENM ++QRLL+L   ++++A+++V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  HLTEQMNKKVREYSLGMKQRLGIAMALARQPQLLILDEPTNGLDPAGIEEMRGLLRHLAV  180
            +L +Q NKKV +YSLGMKQRLGIAMA+ + P+LLILDEPTNGLDPAGIEE+R L++ L+ 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  N-GVTVMVSSHLLGEIDKIATQLGILAQGRMIFQGTRAELMKASSPDVLITCSEPRRAQN  239
            + G+TV++SSHLL+EID+IAT +GI+ +G ++FQ++  EL + + +++ I   +   AQ+
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  240  LFAP--YNPRLKSSGDLALAGTDDKRTAGFVASLVHEGIDIYGVRRDEQSLEDVFMRL  295
            L+    Y + L   G L++    D   A + + LVH  ID++ +  + +SLED+F+ L
Sbjct  241  LLNTKGYMS-LIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

49) Ndas_4010 in NC_014210


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  242 bits (903),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 146/300 (49%), Positives = 222/300 (74%), Gaps = 5/300 (1%)

Query  1    MDHIITTHHLTKAYGARTVVDDLDLRVPPGCVYGFLGPNGSGKSTTMKMLLSLARPTRGE  60
            M+ II T++L+K Y     V D+DLRVP G VYGFLGPNG+GKSTT+KMLL+LA+PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ITVFGQPMNRDTRPALLREIGSLIEAPPGYAHLTGRENMAIVQRMLGLSDRQVSRAVATV  120
            I ++G+ +N   R ++L++IGSLIE+P+ Y+HLTG ENM+I+QR+L+L+ ++V+ A+  V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLQEHMGKLVRAYSLGMKQRLGIAMALAREPRLLILDEPTNGLDPAGIEEIRELLVTLAG  180
            RL+++  K V  YSLGMKQRLGIAMA+ + P+LLILDEPTNGLDPAGIEEIREL+ +L+ 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  E-GVTVMVSSHLLDEIDRMASVLGILGRGKLVFQGTRTELFHRSVPDLLVDTPEPDRALA  239
              G+TV++SSHLL EID++A+ +GI+ +G LVFQ++  EL +R+ +++ + T +   A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  240  L----GVPAVRAERGVRLSGFGDEDTAALVRRLVEGDVPVHGVRRVQQSLEEVFMDLTGR  295
            L    G  ++  +  + +  + D D A +   LV++++ V  +   ++SLE++F++L  R
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

50) FPR_26380 in NC_021020


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  240 bits (896),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 146/300 (49%), Positives = 214/300 (72%), Gaps = 3/300 (1%)

Query  1    MKPVIETHALCKSYHGRPVVDHLNLTVPEGCVYGFLGPNGAGKSTTMKMLLGLVHPTGGS  60
            M  +I T+ L K Y+    V +++L VP+G VYGFLGPNGAGKSTT+KMLLGL  PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VELLGHTLNEANRIVLLRQTGSLIESPSGYLHLTARENLSIVADLKDVDRKDISRVLEIV  120
            +++LG  LNE NRI +L++ GSLIESPS Y HLT+ EN++I+  L D+ +K+++  L IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  HLTKDADRKVGQYSLGMKQRLGIAMALLGSPKLLILDEPTNGLDPAGIQEMRSLIASMPQ  180
            +L ++ ++KV+QYSLGMKQRLGIAMA++  PKLLILDEPTNGLDPAGI+E+R LI S+P+
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  TTGATVLISSHLLGEIEQMVDQVGILNHGKLLFEGSLQQLQKHSRGGILLRVLDAPKAAA  240
              G TVLISSHLL+EI+Q+   +GI+NHG L+F++S+++L++++++ I ++  +   A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  VLQQQGVKAAApadqpdtlqlpplpdealaalVCTLAESGVGVVGLTAQTKSLEDIFLSL  300
            +L+ +G  +    +     +L       +      L +S ++V  +  + KSLEDIFL L
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKIN---GMLVHSNIDVFRIEEHKKSLEDIFLEL  297

51) Shel_05770 in NC_013165


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  234 bits (873),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 144/297 (49%), Positives = 208/297 (71%), Gaps = 4/297 (1%)

Query  1    MEASIATHGLTKAYGDVEVVSGLDMVVPAGSVYGFLGPNGAGKTTTMKMLLGLVHASSGT  60
            ME  I T+ L+K Y  +  V ++D+ VP G+VYGFLGPNGAGK+TT+KMLLGL  ++ G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   STVLGETVSEKTRTKLNARIGSLIENPSCYPHLTARENLEIVRSLRGLPESAIDEALATV  120
              +LG  ++EK R  +   IGSLIE+PS Y HLT+ EN+ I++ L +LP   ++EAL  V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  HLTGTGTKPVRAFSLGMRQRLGLATALMGRPELLLLDEPTNGLDPAGIQEIRELIRALPG  180
            +L     K V  +SLGM+QRLG+A A+M  P LL+LDEPTNGLDPAGI+EIRELI++LP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  EYGCTVLVSSHLLSEIDQMSDHVGIISRGRMVWQGPMGNLHAQARRWLSLRTTDNERAAQ  240
             YG TVL+SSHLLSEIDQ++  +GII++G +V Q+++ +LH +++  ++++T +   A +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  LLGA-SY---GNEGWLNVVAADDDLVAWMTLLLAAHGIAVlrleerredledIFLQL  293
            LL + +Y    ++G L +    D  VA +  +L    I V+R+EE++  LEDIFL+L
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

52) bcrA in NC_018142


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  234 bits (872),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 141/293 (49%), Positives = 210/293 (72%), Gaps = 3/293 (1%)

Query  32   VETRGVTKRYGRQTVVNQLNLAVPSGGVYGFLGPNGAGKSTTMKMLLGLAKPTEGEVRVF  91
            + T+ ++K Y +   V++++L VP G+VYGFLGPNGAGKSTT+KMLLGLAKPT+G++ ++
Sbjct  5    IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINIL  64

Query  92   GRDLRA-NRADILPRIGSLIEGPAFYPHLTGAQNLRIVADYLSCDKSSVDAVLDIVGLTD  150
            G++L   NR  IL  IGSLIE+P++Y HLTG +N+ I+   L   K +V+  L IV L +
Sbjct  65   GKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLEN  124

Query  151  AAGKRARQYSLGMKQRLGIAMALISGPELLLLDEPTNGLDPAGVAEIRNLIVRLAHDRGI  210
               K+  QYSLGMKQRLGIAMA++  P LL+LDEPTNGLDPAG+ EIR+LI  L++  G+
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  211  TVMVSSHLLSEIEQMADIVGIIQSGHLRYQGPLSGL--RDQGQLVMKVSPVNAAVAHLEA  268
            TV++SSHLLSEI+Q+A  +GII+ G+L +Q+++  L  R+Q+Q+ +K   V +A   L++
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNT  244

Query  269  LGLRPQSAGDEIILPPLRDDLIAEAVARLVGAGVRIARVELRRKSLEEAFLEL  321
             G  +   ++ + +  L+D  +A   + LV + + + R+E ++KSLE+ FLEL
Sbjct  245  KGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

53) Ksed_23680 in NC_013169


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  233 bits (868),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 140/300 (47%), Positives = 215/300 (72%), Gaps = 5/300 (1%)

Query  1    MTSVITTRGLTKQFKTHTAVNSLDLDVPQGHVYGFLGPNGSGKSTTMKMLLGLTQPTSGD  60
            M  +I T+ L+K+++    V+ +DL VPQG VYGFLGPNG+GKSTT+KMLLGL++PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IDVLGEPLTRASRTKLLPSIGSMIEAPPGYGHLTGRENMRIVQDMLDLSTAQIDHALATV  120
            I++LG  L   +R  +L  IGS+IE+P+ YGHLTG ENM I+Q +LDL+  ++++AL  V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLTEQQHKLVRNYSLGMKQRLGIAMALARDPALLILDEPTNGLDPAGIEEIRMLLVDLAG  180
            RL +Q++K V +YSLGMKQRLGIAMA+ + P LLILDEPTNGLDPAGIEEIR L+  L+ 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  R-GITVMVSSHLLDEIDKMASVLGILSSGTMIFQGSRDQLFEQSVPDLIIETSD---PQA  236
            + G+TV++SSHLL EID++A+ +GI++ G ++FQ+S  +L +++ +++ I T +   +Q 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  237  ALAQGITATRVPEG-IRMSGIDKDETAKVVYQLAVAGVPIYEVHRVAQSLEDVFMDLTGR  295
             L      + + +G + +  +   + AK+   L  + + ++ ++   +SLED+F++L  R
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

54) SMU_1148 in NC_004350


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  230 bits (858),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 134/254 (53%), Positives = 203/254 (80%), Gaps = 4/254 (1%)

Query  1    MKMLLGLLQPTHGSIRLFDKNF-DSNQIALLSSVGSLIEEPSYYANLTGYENLEIIQRLL  59
            +KMLLGL +PT+G+I +++K++ + N+I++L  +GSLIE PSYY++LTG EN+ I+QRLL
Sbjct  47   LKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL  106

Query  60   KLPKENIDKVLKIVKLYEQKDKLVKNYSLGMKQRLGIALAIIKFPKLLILDEPTNGLDPA  119
             LPK N++  LKIV+L +QK+K V +YSLGMKQRLGIA+AI+KFPKLLILDEPTNGLDPA
Sbjct  107  DLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPA  166

Query  120  GIQEIRELIKSLPQKYDMTVIISSHILSEIEQMATTVGIINKGKLLFEGQLTELEE--DE  177
            GI+EIRELIKSLP+KY+MTV+ISSH+LSEI+Q+AT++GIIN G L+F++ + EL++  + 
Sbjct  167  GIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQS  226

Query  178  KYLFETSDDALAEQLLMRKGF-ELEENQSIVLKDYNKTNIAAAVKVLVANDIDIYQVRMV  236
            +  + T +   A++LL  KG+  L ++  + + + + +++A    +LV ++ID++++   
Sbjct  227  QIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEH  286

Query  237  RKSLEEVFLDMTGR  250
            +KSLE++FL++  R
Sbjct  287  KKSLEDIFLELLVR  300

55) HMPREF9154_1693 in NC_018142


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  228 bits (849),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 135/296 (46%), Positives = 210/296 (71%), Gaps = 3/296 (1%)

Query  21   NLVVATEALTKSYRDFNAVDGINLQVPQGGVYGFLGPNGAGKSTTMKLLLGLVKPTSGRM  80
            ++++ T+ L+K Y  +  V +I+L+VPQG+VYGFLGPNGAGKSTT+K+LLGL KPT G +
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  81   SVLGHPVGTGSPLPA-GAIGSLIEGPSYYPSLSGRENLMMLADYLGLPKARVQHALKTVD  139
            ++LG  +   + ++    IGSLIE+PSYY  L+G EN+ ++   L+LPK  V++ALK V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  140  LAGQESKLVKRYSMGMKQRLGLAMALLADPRLILLDEPTNGLDPAGVAEIRQLIVALARQ  199
            L  Q +K V +YS+GMKQRLG+AMA++  P+L++LDEPTNGLDPAG+ EIR+LI +L+ +
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  200  EGVTVIVSSHILSEIEQMADSVGIICAGRLRYQGPLSGL--RDEGVIEFTAADPAGVSAL  257
             G+TV++SSH+LSEI+Q+A S+GII  G L +Q+++  L  R+++ I + + +  +   L
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  258  LRAHRIGHRVTGGVIRTPMLPDPLVGDLVTRIVQAGQTLFRVQTVRKSLEQAFLEL  313
            L +      + +G +    L D+ V+ +   +V++   +FR++  +KSLE+ FLEL
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

56) Acid345_1438 in NC_008009


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  228 bits (849),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 134/302 (45%), Positives = 219/302 (73%), Gaps = 5/302 (1%)

Query  9    LCLSTQDLTHRYAGHEAPVLTDVNLKVAEGSIYGFLGPNGAGKTTTLRLVLGLLQKQQGT  68
            + + TQ L+  Y  +    + D++L+V++G++YGFLGPNGAGK+TTL+++LGL +  QG 
Sbjct  3    MIIRTQRLSKEY--NKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  69   ISILQRDL-DSHRIEVLKHVGSLIETPSLYEHLTAVENLQIMQRIHRAPATRIDEVLSPL  127
            I+IL ++L + +RI +LK++GSLIE+PS Y HLT++EN+ IMQR+   P   ++E L  +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  128  GLFSARHKKAGQYSLGMKQRLSIAIALLHRPSLLILDEPTNGLDPSGIIEIRELLKKLNR  187
             L + ++KK +QYSLGMKQRL+IA+A++  P LLILDEPTNGLDP+GI EIREL+K L  
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  188  EDGVTILISSHLLGEIEKIATHVGVIHRGRLMFQGTLAELRETALATGTATVCTSDNLQA  247
              G+T+LISSHLL+EI++IAT +G+I++G L+FQ+++ EL++   + +  ++ T + + A
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR--GQSQIAIKTKNVVSA  238

Query  248  LKVIHPHHPDAHFADGRICVPSVSPENLARINRLLVQQGIDVYGLTPSGDDLENIFMEMV  307
             K+++     + + DG + + ++   ++A+IN +LV+  IDV+ +      LE+IF+E++
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

Query  308  SH  309
             +
Sbjct  299  VR  300

57) HMPREF9154_1350 in NC_018142


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  226 bits (842),  Expect = 9e-61, Method: Compositional matrix adjust.
 Identities = 137/296 (47%), Positives = 212/296 (72%), Gaps = 5/296 (1%)

Query  7    DLAVRTRGLTKSFRKRTVVDGLDLAIPRGSVYGFLGPNGSGKSTTMKMLLGLLHPSAGQV  66
            ++ +RT+ L+K + K   V ++DL +P+G+VYGFLGPNG+GKSTT+KMLLGL  P+ G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  67   FLLGEDPWGEARARLMPRIGSMIEHPPGYGHLTGAENMRLLARLLNLETTRIDRALELVR  126
             +LG +     R  ++  IGS+IE P+ YGHLTG ENM ++ RLL+L    ++ AL +VR
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  127  LTDHRDRLQRTYSLGMKQRLGIAMALAREPELLILDEPTNGLDPAGIEEIRELMIHLASG  186
            L +++++    YSLGMKQRLGIAMA+ + P LLILDEPTNGLDPAGIEEIREL+  L+  
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  187  -GVTVMISSHLLDEIDRMADILGVLSQGRLVFQGSRKELFERSIPDLLVVTPQANAAANL  245
             G+TV+ISSHLL EID++A  +G++++G LVFQ+S KEL +R+ +++ + T +  +A +L
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  246  V--RGC-RLERNG-IRVQGCGQEDAARLIVRLVQEGIPIHEVRRLQQSLEEVFMDL  297
            +  +G   L ++G + ++   + D A++   LV+  I +  +   ++SLE++F++L
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

58) LGMK_08450 in NC_015734


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  224 bits (833),  Expect = 5e-60, Method: Compositional matrix adjust.
 Identities = 146/298 (49%), Positives = 220/298 (74%), Gaps = 9/298 (3%)

Query  5    ILEVNNLSKSFQGNRILKDVSLTVQEGDIYGLLGKNGAGKSTTMKAILKLIKLDSGTIKL  64
            I+  + LSK ++    +KD+ L V +G +YG+LG NGAGKSTT+K +L L K   G I++
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FDQYNIADTN--AYLSDIGSLIEAPSFYPNLTAIENLKILQRLADVPQSNIEKVLTIVDL  122
            +++ ++ + N  + L DIGSLIE+PS+Y +LT++EN+ I+QRL D+P+ N++  L IV L
Sbjct  64   LGK-ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  123  QNVPKKKLVKNYSLGMKQRLGIALALLKFPKLIILDEPTNGLDPKGVREIRELIASLPEK  182
            +N  +KK V +YSLGMKQRLGIA+A++KFPKL+ILDEPTNGLDP G+ EIRELI SLPEK
Sbjct  123  ENQKNKK-VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  183  YGTTVLISSHILSEIEKIANRVAIINNGQIKYEGSLAELEK--TSRLVIKTDNNSVAVRL  240
            YG TVLISSH+LSEI++IA  ++IIN+G++ +++S+ EL++   S++ IKT N   A +L
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  241  LEKHQYLINKQNEDGF-ELNNIDRATIIQINQLLVTHDIGVHELHVVKNSLEDMFLTM  297
            L+   Y+     +DG+  ++N+  + + +IN +LV  +I+V  ++  K+SLED+FL +
Sbjct  242  LNTKGYM--SLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

59) BAST_0760 in NC_018720


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  224 bits (833),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 131/303 (44%), Positives = 213/303 (71%), Gaps = 13/303 (4%)

Query  11   QLAVATQGLVKAYGGFKAVDGLNLRVPAGGVYGLLGPNGAGKSTTMKLLLGLTKPTAGSM  70
            ++ + TQ L K Y  +  V +++LRVP G+VYG+LGPNGAGKSTT+K+LLGL+KPT G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  71   WLLGQQVGKKSRIQPGR-VGSMIEGPSFYPGLSGLDNCRMVADYLDLPVSAASEVLTKVG  129
             +LG+++  K+RI   + +GS+IE+PS+Y  L+GL+N  ++   LDLP    +E L  V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  130  LRGYEKRKAGAYSLGMKQRLGIAMALISHPELLLLDEPTNGLDAEAVVEVRRMIMDLAAS  189
            L    ++K + YSLGMKQRLGIAMA++  P LL+LDEPTNGLD+ ++ E+R +I  L+  
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  190  EGVTVIISSHILSEIEKMAPVVGIIADGHLLYQGTLENL--REEGHINLRVSDPGLASEM  247
             G+TV+ISSH+LSEI+++A  +GII +G+L++Q+++ +L  R +++I ++  +   A  +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  248  LETQG----IHHEYIRKSATLRIPEIPDPQIGSLVTRLVSHGLQVYRVAAERKSLEEAFL  303
            L+T+G    I++ Y      L I ++ D++++ +   LV   ++V+R+  ++KSLE+ FL
Sbjct  242  LNTKGYMSLIQDGY------LTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  304  ELV  306
            EL+
Sbjct  296  ELL  298

60) LKI_03865 in NC_014136


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  223 bits (831),  Expect = 8e-60, Method: Compositional matrix adjust.
 Identities = 145/298 (49%), Positives = 221/298 (75%), Gaps = 9/298 (3%)

Query  5    ILEVNNLSKSFQGNRILKDVSLTVHEGDIYGLLGKNGAGKSTTMKAILKLIKLDSGTIKL  64
            I+  + LSK ++    +KD+ L V +G +YG+LG NGAGKSTT+K +L L K   G I++
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FDQYNIADTN--AYLSDIGSLIEAPSFYPNLTAIENLKILQRLADVPQSNIEKVLTIVDL  122
            +++ ++ + N  + L DIGSLIE+PS+Y +LT++EN+ I+QRL D+P+ N++  L IV L
Sbjct  64   LGK-ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  123  QNVPKKKLVKNYSLGMKQRLGIALALLKFPKLIILDEPTNGLDPKGVREIRELIASLPEK  182
            +N  +KK V +YSLGMKQRLGIA+A++KFPKL+ILDEPTNGLDP G+ EIRELI SLPEK
Sbjct  123  ENQKNKK-VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  183  YGTTVLISSHILSEIEKIANRVAIINNGQIKYEGSLAELEKT--SRLVIKTDNNSAAVRL  240
            YG TVLISSH+LSEI++IA  ++IIN+G++ +++S+ EL++   S++ IKT N  +A +L
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  241  LEQHQYLINKQNEDGF-ELNNIDRATIIQLNQLLVTHDIGVHELHVVKNSLEDMFLTM  297
            L+   Y+     +DG+  ++N+  + + ++N +LV  +I+V  ++  K+SLED+FL +
Sbjct  242  LNTKGYM--SLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

61) BaLi_c01770 in NC_021362


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  222 bits (828),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 137/297 (47%), Positives = 211/297 (72%), Gaps = 4/297 (1%)

Query  1    MIIETKGVTKTYNRIDVVKDAGLLVPEGEVYGFLGPNGSGKTTMMRMLMGLIRPDSGEIL  60
            MII T+ ++K YN+I  VKD +L VP+G VYGFLGPNG+GK+T ++ML+GL +P  G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   MFGNRMPD-NRISILAKTGALIEKPSYYEHLDGRDNLRILATLRGISDNRAIDWALERVG  119
            ++G+ + + NRISIL   G+LIE PSYY HL G +N+ I+  L +++ ++ ++ AL  V 
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKIVR  121

Query  120  LHRVGSKKVKSYSLGMKQRLGIASAILHNPRLLLLDEPTNGLDPEGIHEIRELIRELPKK  179
            L+   +KKV  YSLGMKQRLGIA AI+  P+LL+LDEPTNGLDP GI+EIRELI+ LP K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  180  EGATVLVSSHLLGEVEQMANRIGVIYHGNLLFQGEMATLLSDQKSGYIIRSTESGKIIDI  239
             G TVL+SSHLL+E++Q+A  IG+I HG+L+FQ+ +  L +  +S   I++ +      +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  240  LHEHGLETRVDRA--EQVQVSGAVKDKIEGILIENEITDFHINESPGTLEEAYLQLI  294
            L+  G  + ++ +     ++ ++   KI+G+L++++I  F+I+E   +LE+ +L+L+
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

62) BH0448 in NC_002570


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  222 bits (825),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 141/303 (47%), Positives = 220/303 (73%), Gaps = 10/303 (3%)

Query  1    MIIEAKGLKKIYNHvpvvddvdllvpEGEVFGFLGPNGSGKTTVMRMLLGLVKTDGGDIK  60
            MII ++ L K YN +  V D+DL VP+G V+GFLGPNG+GK+T ++MLLGL K   G+I+
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   ILGKSL-EKNRLSILKEVGALIETPAYYGHLNAIDNLKIAATLRQIEDHSQIEKTLDRVG  119
            ILGK L EKNR+SILK++G+LIE+P+YYGHL +++N+ I   L ++   + ++ +L  V 
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVR  121

Query  120  LTSSKHKKVKSFSLGMKQRLGIAMALLHQPKLLLLDEPTNGLDPEGIQEMRELIRDLPKK  179
            L + K+KKV  +SLGMKQRLGIAMA++  PKLL+LDEPTNGLDP GI+E+RELI+ LP K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  180  EGVTVFVSSHLLGEIDQVASQVGVIYHGSLLYQGQKNDLLASHGGTTVSVHTPEKDKVEQ  239
             G+TV++SSHLL+EIDQ+A+ +G+I HG L++Q+  ++ L ++G + +++ T +    ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE-LHNRGQSQIAIKTKNVVSAQK  240

Query  240  LLVMEGFH--VQKSIRHKEDEIMITGPHVTKEVIVMLLQREGIQNYYVQEHHRTLEDAYM  297
            LL   G+   +Q +    E+   + +++V+K  I  +L +  I+ + ++EH ++LED ++
Sbjct  241  LLNTKGYMSLIQDGYLTIEN---LKDSDVAK--INGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  ALI  300
             L+
Sbjct  296  ELL  298

63) H04402_00621 in NC_017299


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  221 bits (823),  Expect = 3e-59, Method: Compositional matrix adjust.
 Identities = 130/297 (44%), Positives = 218/297 (74%), Gaps = 3/297 (1%)

Query  3    NIVVNTNNLQKSFNKKIVVKNLCLRIPKGCIFGLLGPNGVGKTTTIRMILGLIRPDNGSV  62
            ++++ T+ L K +NK + VK++ LR+P+G ++G+LGPNG GK+TT++M+LGL +P +G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   EIFGKDISS-NREAILKNIGAMVETPSFYGNLNAWENLKIVCLMKQISTEHINSTLELVG  121
            +I+GK+++  NR +ILK+IG+++E+PS+YG+L + EN+ I+  + +++  ++N +L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  122  LENCAEKKVSKFSLGMKQRLGIATAIIGSPKLVILDEPVNGLDPAGIHEIRTLIKTLAKK  181
            LEN  +KKVS++SLGMKQRLGIA AI+  PKL+ILDEP NGLDPAGI+EIR LIK+L+ K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  182  LQITFLISSHLLNEMELMADKVGIIKNGHLIYQGDLQQLMKNHHRKIVLGVTELKKAIKY  241
              +T LISSHLL+E++ +A  +GII++G+L++Q+ +++L +  + +I +   ++  A K 
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  242  FSNKNIPVINQDNNLVIEG--KYTVEDISKELMEQGIGITSIYNKNDSLEDIYLKMM  296
            ++ K    + QD  L IE      V  I+  L++  I++  I + + SLEDI+L ++
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

64) ROI_39470 in NC_021040


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  219 bits (816),  Expect = 8e-59, Method: Compositional matrix adjust.
 Identities = 128/222 (58%), Positives = 185/222 (84%), Gaps = 1/222 (0%)

Query  1    MNYIITTEQLTKKYKSFVAVNDVSLHIRKGSIYGFLGPNGAGKSTTMKMLLGLTAPTKGD  60
            M+ II T++L+K Y+ +  V+D+ L++ +G++YGFLGPNGAGKSTT+KMLLGL+ PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   FTIDGKQFPA-DRISILKEIGSFIESPSFYANLTGKENLDIIRRILGLPQSAVEDALELV  119
            + I GK++   +RISILK+IGS+IESPS+Y++LTG EN+ I++R+L+LP+  V++AL +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  GLSEFGDRLAKKYSLGMKQRLGLAGALIGRPPILILDEPTNGLDPSGIHEIRNLIKSLPE  179
             L +  ++   +YSLGMKQRLG+A A++  P +LILDEPTNGLDP+GI+EIR+LIKSLPE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  LYDCTVLISSHILSEIELMADDIGILNHGRLLFEGSLDELRQ  221
             Y+ TVLISSH+LSEI+ +A  IGI+NHG L+F++S+ EL++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

65) clvF in NC_009480


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  219 bits (817),  Expect = 9e-59, Method: Compositional matrix adjust.
 Identities = 131/300 (44%), Positives = 211/300 (71%), Gaps = 5/300 (1%)

Query  1    MSAVIATRGLTKRFRDHVAVDALDIEVPQGSVYGFLGPNGSGKSTTMKMLLGLTQPTSGE  60
            M  +I T+ L+K +     V  +D+ VPQG+VYGFLGPNG+GKSTT+KMLLGL++PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IHLFGQRLTPATRGGLLPSIGSMIEAPAGYGHLTGWENMRIVRDMLGLAEAQVERAFATV  120
            I+++G+ L    R ++L  IGS+IE+P+ YGHLTG ENM I++ +L+L+  +V+ A+  V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  RLTQHRDKLVRRYSLGMKQRLGIAMALARDPSLLVLDEPTNGLDPAGIEEVRSLLMDLAG  180
            RL ++++K V +YSLGMKQRLGIAMA+ + P LL+LDEPTNGLDPAGIEE+R L+  L+ 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  Q-GITVMVSSHLLDEIEKMAGVLGILADGRMIFQGTRAELFEHSIPDLVIETS---APDR  236
            + G+TV++SSHLL EI+++A  +GI+ +G ++FQ++  EL +++ +++ I T    ++++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  237  AMAEVAGAARSPEG-IRLSARSKDETADIVRRLVAADVPVHEVRRLPQSLEDVFMDITGR  295
             +   +  +   +G + +      + A I   LV +++ V  +    +SLED+F+++  R
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR  300

66) sboF in NC_017905


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  218 bits (810),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 131/298 (44%), Positives = 217/298 (73%), Gaps = 6/298 (2%)

Query  5    VLQIKNLQKEFKDTQVVNLRSLSVQQGEIYGFLGPNGAGKTTTMKMILSLISRTAGDIEV  64
            +++ + L KE++    V+   L V QG +YGFLGPNGAGK+TT+KM+L+L   T G+I++
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGQSIGTDKQY--LNQIGSMIEEPSYYPNLTGYENLLVFQKILGFDKKNIQETLKIVGLD  122
            +G+ +   ++   L++IGS+IE PSYY +LTG EN+ + Q++L++ KKN++E+LKIV L+
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  123  QPKNKKKLVKDYSLGMKQRLALAFALVKKPRLLILDEPTNGLDPAGIHEIRELIIKLAKE  182
            + KNKK  V +YSLGMKQRL++A A++K P+LLILDEPTNGLDPAGI+EIRELI  L+  
Sbjct  124  NQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  183  QGITVFISTHILSEVEHIADRVGIINHGQLVYEGEIRKIQSNKWLEVRGDFRGRREAISQ  242
             G+TV+IS+H+LSE+++IA  +GIINHG+LV+++ I+ +++  + + +  ++ +    +Q
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN--RGQSQIAIKTKNVVSAQ  239

Query  243  VLFGYPCKMLEIHEDKLKLTNLADQQISSLLRDLIVEEVPIYEVKQEQETLESIFLNL  300
             L+     M  I+++ L + NL D +++ +   L+  ++ ++ + +++ +LE IFL+L
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

67) EUS_03370 in NC_021011


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  217 bits (807),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 118/223 (53%), Positives = 184/223 (83%), Gaps = 1/223 (0%)

Query  3    IIETQNLTKNYGDFTAVSHLNLHIRKGSVYGFLGPNGAGKSTTMKMFLGLTQPTEGSFHI  62
            II TQ L+K+Y  +  V +++L++ +G+VYGFLGPNGAGKSTT+KM+LGL++PT+G+++I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   DGKTYP-SDRVPILKEVGSFIEAPAFYGNLSGEENLEIIRKILGLPKSSVDDALELVGLT  121
             GK     +R++ILK++GS+IE+P++YG+L+G EN+ I++++L+LPK +V++AL +V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  122  EFRKRLAKKYSLGMKQRLGLAGALIGRPPILILDEPTNGLDPVGIHEIRTLIRSLPQKYD  181
            + +++   +YSLGMKQRLG+A A++  P +LILDEPTNGLDP GI+EIR LI+SLP+KY+
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  182  CTVLVSSHLLPEVELMADDIGILNHGHLLFEGTKEELKTSARA  224
             TVL+SSHLL+E++ +A  IGI+NHG+L+F+++  EL   +++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQS  226

68) bcrA in NC_013721


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  217 bits (806),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 126/224 (57%), Positives = 188/224 (84%), Gaps = 1/224 (0%)

Query  1    MNNIVTTEHLTKKYKSFIAVNDVSLHIRKGSIYGFLGPNGAGKSTTMKMLLGLTAPTKGV  60
            M+ I+ T++L+K Y+ ++ V+D+ L++ +G++YGFLGPNGAGKSTT+KMLLGL+ PT+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   FTIDGKQFPA-DRIPILKEIGSFIESPSFYANLTGRENLDIIRRILELPKSAVDDALELV  119
            + I GK++   +RI+ILK+IGS+IESPS+Y++LTG EN+ I++R+L+LPK  V++AL +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  GLSEFGDRLAKKYSLGMKQRlglagallgRPPILILDEPTNGLDPSGIHEIRNLIKSLPD  179
             L +  ++   +YSLGMKQRLG+A A++  P +LILDEPTNGLDP+GI+EIR+LIKSLP+
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  LYDCTILISSHMLSEIELIADDIGILNHGHLLFEGSLDELRHHA  223
             Y+ T+LISSH+LSEI+ IA  IGI+NHG+L+F++S+ EL++++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRG  224

69) bcrA in NC_014644


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  215 bits (801),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 126/224 (57%), Positives = 187/224 (84%), Gaps = 1/224 (0%)

Query  1    MNNIVTTEHLTKKYKSFIAVNDVSLHIRKGSIYGFLGPNGAGKSTTMKMLLGLTAPTKGV  60
            M+ I+ T++L+K Y+ ++ V+D+ L++ +G++YGFLGPNGAGKSTT+KMLLGL+ PT+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   FTIDGKQFPA-DRIPILKEIGSFIESPSFYANLTGRENLDIIRRILALPKSAVDDALELV  119
            + I GK++   +RI+ILK+IGS+IESPS+Y++LTG EN+ I++R+L LPK  V++AL +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  GLSEFGDRLAKKYSLGMKQRlglagallgRPPILILDEPTNGLDPSGIHEIRNLIKSLPD  179
             L +  ++   +YSLGMKQRLG+A A++  P +LILDEPTNGLDP+GI+EIR+LIKSLP+
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  LYDCTILISSHMLSEIELIADDIGILNHGHLLFEGSLDELRQHA  223
             Y+ T+LISSH+LSEI+ IA  IGI+NHG+L+F++S+ EL++++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRG  224

70) bcrA in NC_017456


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  215 bits (801),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 126/224 (57%), Positives = 187/224 (84%), Gaps = 1/224 (0%)

Query  1    MNNIVTTEHLTKKYKSFIAVNDVSLHIRKGSIYGFLGPNGAGKSTTMKMLLGLTAPTKGV  60
            M+ I+ T++L+K Y+ ++ V+D+ L++ +G++YGFLGPNGAGKSTT+KMLLGL+ PT+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   FTIDGKQFPA-DRIPILKEIGSFIESPSFYANLTGRENLDIIRRILALPKSAVDDALELV  119
            + I GK++   +RI+ILK+IGS+IESPS+Y++LTG EN+ I++R+L LPK  V++AL +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  GLSEFGDRLAKKYSLGMKQRlglagallgRPPILILDEPTNGLDPSGIHEIRNLIKSLPD  179
             L +  ++   +YSLGMKQRLG+A A++  P +LILDEPTNGLDP+GI+EIR+LIKSLP+
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  LYDCTILISSHMLSEIELIADDIGILNHGHLLFEGSLDELRQHA  223
             Y+ T+LISSH+LSEI+ IA  IGI+NHG+L+F++S+ EL++++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRG  224

71) RO1_37830 in NC_021012


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  215 bits (802),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 125/222 (57%), Positives = 189/222 (86%), Gaps = 1/222 (0%)

Query  1    MDYIITTEQLTKKYKNFTSVNHVSLHIRKGSIYGFLGPNGAGKSTTMKMLLGLTNPTKGS  60
            M+ II T++L+K Y+++  V+++ L++ +G++YGFLGPNGAGKSTT+KMLLGL++PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   FTIDGKQFPQ-DRIAILKEIGSFIEAPSFYANLTGRENLDIIRRILELPKADVEDALELV  119
            + I GK++ + +RI+ILK+IGS+IE+PS+Y++LTG EN+ I++R+L+LPK +V++AL +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  GLTEFGDRLAKQYSLGMKQRlglagallgRPPILILDEPTNGLDPSGIHEIRNLVKSLPS  179
             L +  ++   QYSLGMKQRLG+A A++  P +LILDEPTNGLDP+GI+EIR+L+KSLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  LYDCTVLISSHMLSEIELIADDIGILNHGRLLFEGSMNDLRQ  221
             Y+ TVLISSH+LSEI+ IA  IGI+NHG L+F++S+++L++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

72) CC1_30250 in NC_021009


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  213 bits (793),  Expect = 6e-57, Method: Compositional matrix adjust.
 Identities = 126/222 (57%), Positives = 187/222 (85%), Gaps = 1/222 (0%)

Query  1    MDYIITTEQLTKKYKNFTSVNHVSLHIRKGSIYGFLGPNGAGKSTTMKMLLGLTAPTKGS  60
            M+ II T++L+K Y+++  V+++ L++ +G++YGFLGPNGAGKSTT+KMLLGL+ PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   FTIDGKQFPQ-NRIAILKEIGSFIEAPSFYANLTGRENLDIIRRILRLPKADVEDALELV  119
            + I GK++ + NRI+ILK+IGS+IE+PS+Y++LTG EN+ I++R+L LPK +V++AL +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  GLTEFGDRLAKQYSLGMKQRlglagallgRPPILILDEPTNGLDPSGIHEIRNLVKSLPS  179
             L +  ++   QYSLGMKQRLG+A A++  P +LILDEPTNGLDP+GI+EIR+L+KSLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  LYDCTVLISSHMLSEIELIADDIGILNHGRLLFEGSMNDLRQ  221
             Y+ TVLISSH+LSEI+ IA  IGI+NHG L+F++S+++L++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

73) mrsF in NC_017138


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  213 bits (792),  Expect = 7e-57, Method: Compositional matrix adjust.
 Identities = 122/250 (49%), Positives = 192/250 (77%), Gaps = 1/250 (0%)

Query  1    MLLGLMKPTSGEIELFGERIINHRQHIRALKKIGSLVESPSYYAHLTARENLEVLRKILG  60
            MLLGL KPT G+I+++G + +N++++I  LK IGSL+ESPSYY+HLT+ EN+ +++++L+
Sbjct  49   MLLGLAKPTQGNINILG-KELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLD  107

Query  61   VSRNRVDEVLDIVKLTKEANRPVKGFSLGMKQRLGIASALLGNPRLLILDEPTNGLDPAG  120
            ++++ V+E L IV+L ++ N+ V  +SLGMKQRLGIA A++  P+LLILDEPTNGLDPAG
Sbjct  108  LPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAG  167

Query  121  IQEIRSLIKEMPRENGVTVLISSHLLYEIDHLATQVGIITKGKMLFNGSIESLRKKAKHQ  180
            I+EIR LIK +P   G+TVLISSHLL EID++AT +GII  G ++F++SI  L+++++ Q
Sbjct  168  IEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQ  227

Query  181  VAFTIGEIEKAKTILLTNGFVPTVNKNSLLLDYIDHERVAHLVYQLVRENVSIYRVEEKT  240
            +A+   ++  A+ +L T+G+++ ++   L ++ + +  VA +   LV+ N+ ++R+EE  
Sbjct  228  IAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHK  287

Query  241  KSLEDIFLKL  250
            KSLEDIFL L
Sbjct  288  KSLEDIFLEL  297

74) Aeqsu_3151 in NC_018013


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  213 bits (792),  Expect = 9e-57, Method: Compositional matrix adjust.
 Identities = 130/301 (44%), Positives = 208/301 (70%), Gaps = 8/301 (2%)

Query  3    EYIIETQNLNFSYSKSNRDIEELNLQVPKGSIYGFLGPNGSGKSTSIRLLLGLLKKESGT  62
            E II TQ L+  Y+K  R + +++L+VP+G++YGFLGPNG+GKST++++LLGL K   G 
Sbjct  2    EMIIRTQRLSKEYNKIFR-VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  63   ITLFGNTF-ENNRIETLSKIGALIENPSLYGHLNAIDNLRIAANYKSIDKSRIDEVLEIV  121
            I ++G+ + E+NRI  L  IG+LIE+PS YGHL +++N+ I      + K  ++E L IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  122  KLTYAKNKKVAKYSLGMKQRLGIATALLSNPEILILDEPTNGLDPKGIIEMRALIKTLNE  181
            +L   KNKKV++YSLGMKQRLGIA A++  P +LILDEPTNGLDP GI E+R LIK+L E
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  182  NYGTTIFISSHLLSEIEKTCSHVGIIRNGKMLFQNTVKALKKSQSDTVAIDI-ETSDSRR  240
            +YG T++ISSHLLSEI++  + +GII +G ++FQ+++K L +     +AI   +   +++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  241  LKSVIAPLCIDTETIDMSLTSIILNSKDEISALIDEIRKEGIDIYQI-TIKNNLEDLFLT  299
            L +  + + +  +   +++ ++      +++ + + +    ID+++I   K++LED+FL 
Sbjct  241  LLNTKGYMSLIQDGY-LTIENL---KDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLE  296

Query  300  L  300
            L
Sbjct  297  L  297

75) bcrA in NC_013895


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  212 bits (789),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 126/224 (57%), Positives = 187/224 (84%), Gaps = 1/224 (0%)

Query  1    MNNIVTTEHLTKKYKSFIAVNDVSLHIRKGSIYGFLGPNGAGKSTTMKMLLGLTAPTKGV  60
            M+ I+ T++L+K Y+ ++ V+D+ L++ +G++YGFLGPNGAGKSTT+KMLLGL+ PT+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   FTIDGKRFPA-DRIPILKEIGSFIESPSFYANLTGRENLDIIRRILELPKRAVDDALELV  119
            + I GK +   +RI+ILK+IGS+IESPS+Y++LTG EN+ I++R+L+LPK+ V++AL +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  GLSEFGDRLAKKYSLGMKQRlglagallgRPPILILDEPTNGLDPSGIHEIRNLIKSLPY  179
             L +  ++   +YSLGMKQRLG+A A++  P +LILDEPTNGLDP+GI+EIR+LIKSLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  LYDCTILISSHMLSEIELIADDIGILNHGHLLFEGSLDELRQHA  223
             Y+ T+LISSH+LSEI+ IA  IGI+NHG+L+F++S+ EL++++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRG  224

76) Halhy_3635 in NC_015510


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 133/298 (45%), Positives = 221/298 (75%), Gaps = 6/298 (2%)

Query  4    IETENLSHQFASGKNILDNITLQVPSGSIYGFLGPNGAGKTTTLRLILGLLKKQSGRISI  63
            I T+ LS ++     +  +I L+VP G++YGFLGPNGAGK+TTL+++LGL K   G I+I
Sbjct  5    IRTQRLSKEYNKIFRV-KDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  64   FGQTF-EKNRVGILRKLGSLIETPSLYSHLTAAENLLLLQRVYRCPLERIPELLQLVGLP  122
            +G+ + EKNR++IL+ +GSLIE+PS Y+HLT+ EN+ ++QR+   P   + E L++V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  123  DTGKKKVSQFSLGMKQRLSIAVALLNQPELLILDEPTNGLDPNGIIEMRELFKRLNQEQG  182
            +  +KKVSQ+SLGMKQRL+IA+A+++ P LLILDEPTNGLDP GI E+REL+K L +  G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  183  ITILISSHLLAEIEKLVSHVGIIHKGQLLFQGTLQDLIqkqqessslklsTNDNARALHI  242
            +T+LISSHLL+EI+++ + +GII+ G+L+FQ+++++L   ++  S + + T++   A  +
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL--HNRGQSQIAIKTKNVVSAQKL  241

Query  243  LQS-SYPEAQQQNGKLALPPLANAQIAAVNRQLLQHGLEVYHLAIEQNDLESIFMELV  299
            L++ +Y  +  Q+G L++  L ++++A +N  L++  ++V+++  +++ LE IF+EL+
Sbjct  242  LNTKGYM-SLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

77) SZO_07680 in NC_012470


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  212 bits (787),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 206/300 (69%), Gaps = 5/300 (1%)

Query  1    MKNVIELRRLSKVYKDITTVDLEKITVREGEIYGFLGPNGAGKTTTMKMILSLISPTSGE  60
            M  +I  +RLSK Y+ I  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IIVNGSNI-QKGK-GYLKQIGSMIEEPSYYPNLTGYENLIVFQKMVGFAKENIWPTLELV  118
            I + G ++ +K + + LK+IGS+IE PSYY +LTG EN+ + Q++++++K N+  +L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  119  GLSEEKNRKKLVRDYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVKL  178
             L ++KN+K  V +YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L
Sbjct  121  RLENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  179  AKEEGLTVFISSHILTEIEYIADRVGIINHGRLVYEGEIEAIKANRWVEIGGDFSQNNIV  238
            +   G+TV+ISSH+L+EI+ IA  +GIINHG LV+++ I  +      +I+    +    
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA  238

Query  239  QSLVEFGSVEVLGATASYVKISDIDNDKLADVVSYLTKSGYRIFRVGRESETLEDIFLEL  298
            Q L++  +   L    +Y+ I ++ +  +A + + L  S   +FR+  +  +LEDIFLEL
Sbjct  239  QKLLNTKGYMSL-IQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

78) BLIJ_1066 in NC_017219


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  211 bits (784),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 123/296 (42%), Positives = 201/296 (68%), Gaps = 7/296 (2%)

Query  19   TRGLVKRYGDFLAVNGLNLNVPAHGVYGLLGPNGAGKSTTMKLLLGLASATSGDMWMLGE  78
            T+ L K Y  ++ V++++L VP  +VYG+LGPNGAGKSTT+K+LLGLA +T G++ +LG 
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  79   KVGGRHRLQAGR-VGSMIEGPSFYPGLSGLDNCRMVADYLNLPGSAAPAILRQVGLAGHE  137
             +  ++R+   + +GS+IE+PS+Y  L+GL+N  ++   L+LP       L+ V L  + 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  138  GKKARDYSLGMKQRLGIAMALISQPELLLLDEPTNGLDAEAVVEVREMIMGLSRERGITV  197
             KK  +YSLGMKQRLGIAMA++  P LL+LDEPTNGLD+ ++ E+RE+I +L+   G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  198  IISSHILSEIEKMAPVVGVIAAGRLLYQGSLDSL--REEGHIDLRVSDPKLAAAMLGSDR  255
            +ISSH+LSEI+++A  +G+I  G L++Q+S+  L  R +++I ++  +   A  +L +  
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK-  245

Query  256  IDYRWLPGRDGGVLRLPELPDQRIGTLITQLVGQGVAVYRVASERKTLEQAFLELI  311
             +Y  L   ++G L + +L D  ++ +   LV   + V+R+  ++K+LE+ FLEL+
Sbjct  246  -GYMSLI--QDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

79) Blon_1042 in NC_011593


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  211 bits (784),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 123/296 (42%), Positives = 201/296 (68%), Gaps = 7/296 (2%)

Query  19   TRGLVKRYGDFLAVNGLNLNVPAHGVYGLLGPNGAGKSTTMKLLLGLASATSGDMWMLGE  78
            T+ L K Y  ++ V++++L VP  +VYG+LGPNGAGKSTT+K+LLGLA +T G++ +LG 
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  79   KVGGRHRLQAGR-VGSMIEGPSFYPGLSGLDNCRMVADYLNLPGSAAPAILRQVGLAGHE  137
             +  ++R+   + +GS+IE+PS+Y  L+GL+N  ++   L+LP       L+ V L  + 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  138  GKKARDYSLGMKQRLGIAMALISQPELLLLDEPTNGLDAEAVVEVREMIMGLSRERGITV  197
             KK  +YSLGMKQRLGIAMA++  P LL+LDEPTNGLD+ ++ E+RE+I +L+   G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  198  IISSHILSEIEKMAPVVGVIAAGRLLYQGSLDSL--REEGHIDLRVSDPKLAAAMLGSDR  255
            +ISSH+LSEI+++A  +G+I  G L++Q+S+  L  R +++I ++  +   A  +L +  
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK-  245

Query  256  IDYRWLPGRDGGVLRLPELPDQRIGTLITQLVGQGVAVYRVASERKTLEQAFLELI  311
             +Y  L   ++G L + +L D  ++ +   LV   + V+R+  ++K+LE+ FLEL+
Sbjct  246  -GYMSLI--QDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

80) BLJ_1119 in NC_014169


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  211 bits (784),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 123/296 (42%), Positives = 201/296 (68%), Gaps = 7/296 (2%)

Query  19   TRGLVKRYGDFLAVNGLNLNVPAHGVYGLLGPNGAGKSTTMKLLLGLASATSGDMWMLGE  78
            T+ L K Y  ++ V++++L VP  +VYG+LGPNGAGKSTT+K+LLGLA +T G++ +LG 
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  79   KVGGRHRLQAGR-VGSMIEGPSFYPGLSGLDNCRMVADYLNLPGSTAPAILRQVGLAGHE  137
             +  ++R+   + +GS+IE+PS+Y  L+GL+N  ++   L+LP       L+ V L  + 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  138  GKKARDYSLGMKQRLGIAMALISQPELLLLDEPTNGLDAEAVVEVREMIMGLSRERGITV  197
             KK  +YSLGMKQRLGIAMA++  P LL+LDEPTNGLD+ ++ E+RE+I +L+   G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  198  IISSHILSEIEKMAPVVGVIAAGRLLYQGSLDSL--REEGHIDLRVSDPKLAAAMLGSDR  255
            +ISSH+LSEI+++A  +G+I  G L++Q+S+  L  R +++I ++  +   A  +L +  
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK-  245

Query  256  IDYRWLPGRDGGVLRLPELPDQRIGTLITQLVGQGVAVYRVASERKTLEQAFLELI  311
             +Y  L   ++G L + +L D  ++ +   LV   + V+R+  ++K+LE+ FLEL+
Sbjct  246  -GYMSLI--QDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

81) bcrA1 in NC_017061


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  210 bits (781),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 139/303 (46%), Positives = 215/303 (71%), Gaps = 8/303 (2%)

Query  1    MPEIIKTTNLTKVYGKQKSVDNLNITVNEGDIYGFLGRNGAGKTTTIRMLLGLIKPTHGK  60
            M  II+T  L+K Y K   V ++++ V +G +YGFLG NGAGK+TT++MLLGL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IEIFGEDLHTNKK-DILKRIGSIVEVPGFYGNLTAKENLEINARIVGIHKKNAIEEALEI  119
            I+I+G +L+ +++  ILK IGS++E P++YG+LT+ EN+ I  R++++ KKN ++EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGLENETKKLVGKYSLGMKQRLGIARSLLHYPELLILDEPTNGLDPIGIKEMRRLIKTLA  179
            V LEN+ +K V++YSLGMKQRLGIA +++ +P LLILDEPTNGLDP GI E+R LIK+L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  EERKITLLISSHILSEIEQLVDHLGIIHEGKLLEETEFDTLRKRNRKFLEFQVSNDNKAA  239
            E   +T+LISSH+LSEI+Q+   +GII++G L+ +  +  L++R +  + ++  N   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  MLLEKHFQIFDY-EVHGDGIIRIFS-HIGQQGAINKLLVQNDIEVFKILMSEDRLEDYFT  297
             LL+      +Y  +  DG + I +   ++ + IN +LV+++I+VF+I      LED F 
Sbjct  240  KLLNTK----GYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KLV  300
             L+
Sbjct  296  ELL  298

82) bcrA1 in NC_017912


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  210 bits (781),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 139/303 (46%), Positives = 215/303 (71%), Gaps = 8/303 (2%)

Query  1    MPEIIKTTNLTKVYGKQKSVDNLNITVNEGDIYGFLGRNGAGKTTTIRMLLGLIKPTHGK  60
            M  II+T  L+K Y K   V ++++ V +G +YGFLG NGAGK+TT++MLLGL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IEIFGEDLHTNKK-DILKRIGSIVEVPGFYGNLTAKENLEINARIVGIHKKNAIEEALEI  119
            I+I+G +L+ +++  ILK IGS++E P++YG+LT+ EN+ I  R++++ KKN ++EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGLENETKKLVGKYSLGMKQRLGIARSLLHYPELLILDEPTNGLDPIGIKEMRRLIKTLA  179
            V LEN+ +K V++YSLGMKQRLGIA +++ +P LLILDEPTNGLDP GI E+R LIK+L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  EERKITLLISSHILSEIEQLVDHLGIIHEGKLLEETEFDTLRKRNRKFLEFQVSNDNKAA  239
            E   +T+LISSH+LSEI+Q+   +GII++G L+ +  +  L++R +  + ++  N   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  MLLEKHFQIFDY-EVHGDGIIRIFS-HIGQQGAINKLLVQNDIEVFKILMSEDRLEDYFT  297
             LL+      +Y  +  DG + I +   ++ + IN +LV+++I+VF+I      LED F 
Sbjct  240  KLLNTK----GYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KLV  300
             L+
Sbjct  296  ELL  298

83) HMPREF9228_0759 in NC_017218


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  210 bits (782),  Expect = 8e-56, Method: Compositional matrix adjust.
 Identities = 122/296 (42%), Positives = 203/296 (69%), Gaps = 7/296 (2%)

Query  31   TRGLVKRYGDFLAVNGLNLNVPAHGVYGLLGPNGAGKSTTMKLLLGLASATSGDMWMLGE  90
            T+ L K Y  ++ V++++L VP  +VYG+LGPNGAGKSTT+K+LLGLA +T G++ +LG 
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  91   KVGGRHRLQAGR-VGSMIEGPSFYPGLSGLDNCRMVADYLNLPGSAAPAILRQVGLAGHE  149
             +  ++R+   + +GS+IE+PS+Y  L+GL+N  ++   L+LP       L+ V L  + 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  150  GKKARDYSLGMKQRLGIAMALISQPELLLLDEPTNGLDAEAVVEVREMIMGLSRERGITV  209
             KK  +YSLGMKQRLGIAMA++  P LL+LDEPTNGLD+ ++ E+RE+I +L+   G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  210  IISSHILSEIEKMAPVVGVIAAGRLLYQGSLDSLREEGHIDLRVSEPKLAAA--MLGSDR  267
            +ISSH+LSEI+++A  +G+I  G L++Q+S+  L++ G+ ++ +   ++ +A  +L +  
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK-  245

Query  268  IDYRWLPGRDGGVLRLPELPDQRIGTLITQLVGQGVAVYRVASERKTLEQAFLELI  323
             +Y  L   ++G L + +L D  ++ +   LV   + V+R+  ++K+LE+ FLEL+
Sbjct  246  -GYMSLI--QDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

84) bcrA in NC_009697


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  209 bits (776),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 130/297 (44%), Positives = 213/297 (72%), Gaps = 4/297 (1%)

Query  6    LLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGKSTTIKSIMGLIKPTSGKVII  65
            ++ T+ L+KEY++   V+++++ V +G VYGFLGPNGAGKSTT+K ++GL KPT G++ I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   NGYDV-EKDSEKAIEKIGTMVEAPSFYGGLSGYKNLILMANLYGVPKKRVDEVLEMVRLT  124
             G ++ EK+    +  IG+++E+PS+YG L+G  N+ +M  L ++PKK V+E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  DSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNGLDPQGIKDIRELIQDLSKKYH  184
            +  +K+VS+YSLGMKQRLGIA A+++ P+++ILDEPTNGLDP GI +IRELI+ L+ KY 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  VTFLISSHILSEIQAVCNRIGIIEKGSLKIEGYVEELLNTDEEVIEIYTREKEKTSRLLK  244
            +T LISSH+LSEI+ +   IGII+ G L +++ + EL N ++  I I T++   + +LL+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NMNTFSKIECFEGGIRI-KIKKGNFQNINKLLISNDVNVENLHCSETSLENYFFDVM  300
                 S I+  +G + I ++K ++  +IN +L+ ++++V  ++    SLE+ F++++
Sbjct  244  TKGYMSLIQ--DGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

85) CBO1188 in NC_009495


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  209 bits (776),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 130/297 (44%), Positives = 213/297 (72%), Gaps = 4/297 (1%)

Query  6    LLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGKSTTIKSIMGLIKPTSGKVII  65
            ++ T+ L+KEY++   V+++++ V +G VYGFLGPNGAGKSTT+K ++GL KPT G++ I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   NGYDV-EKDSEKAIEKIGTMVEAPSFYGGLSGYKNLILMANLYGVPKKRVDEVLEMVRLT  124
             G ++ EK+    +  IG+++E+PS+YG L+G  N+ +M  L ++PKK V+E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  DSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNGLDPQGIKDIRELIQDLSKKYH  184
            +  +K+VS+YSLGMKQRLGIA A+++ P+++ILDEPTNGLDP GI +IRELI+ L+ KY 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  VTFLISSHILSEIQAVCNRIGIIEKGSLKIEGYVEELLNTDEEVIEIYTREKEKTSRLLK  244
            +T LISSH+LSEI+ +   IGII+ G L +++ + EL N ++  I I T++   + +LL+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NMNTFSKIECFEGGIRI-KIKKGNFQNINKLLISNDVNVENLHCSETSLENYFFDVM  300
                 S I+  +G + I ++K ++  +IN +L+ ++++V  ++    SLE+ F++++
Sbjct  244  TKGYMSLIQ--DGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

86) HMPREF0573_10442 in NC_014246


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  208 bits (774),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 124/221 (57%), Positives = 180/221 (82%), Gaps = 1/221 (0%)

Query  8    DYIVTTEQLTKKYKSFVAVDAVSLHIRKGSIYGFLGPNGAGKSTTMKMLLGLTSPSRGTF  67
            + I+ T++L+K Y+ +  V  + L++ +G++YGFLGPNGAGKSTT+KMLLGL+ P++G +
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  68   TIDGKQFPG-DRISILKEIGSFIESPSFYANLTGKENLEIIRRILGLPKSAVDDALDLVG  126
             I GK++   +RISILK+IGS+IESPS+Y++LTG EN+ I++R+L+LPK  V++AL +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  127  LSEFGDRLAKKYSLGMKQRlglagallgRPPILILDEPTNGLDPSGIHEIRNLIKSLPGL  186
            L +  ++   +YSLGMKQRLG+A A++  P +LILDEPTNGLDP+GI+EIR+LIKSLP  
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  187  YACTVLISSHMLSEIELMADDIGILNHGRLLFEGSLAELRK  227
            Y+ TVLISSH+LSEI+ +A  IGI+NHG L+F++S+ EL++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

87) H04402_01258 in NC_017299


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  208 bits (772),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 131/297 (45%), Positives = 213/297 (72%), Gaps = 4/297 (1%)

Query  6    LLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGKSTTIKSIMGLIKPTSGKVIV  65
            ++ T+ L+KEY++   V+++++ V +G VYGFLGPNGAGKSTT+K ++GL KPT G++ +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   NGYDV-EKDSEKAIEKIGTMVEAPSFYGGLSGYKNLILMANLYGVPKKRVDEVLEMVRLT  124
             G ++ EK+    +  IG+++E+PS+YG L+G  N+ +M  L ++PKK V+E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  DSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNGLDPQGIKDIRELIQDLSKKYH  184
            +  +K+VS+YSLGMKQRLGIA A+++ P+++ILDEPTNGLDP GI +IRELI+ L+ KY 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  VTFLISSHILSEIQAVCNRIGIIEKGSLKIEGYVEDLLNTDEEVIEIYTREKEKTSRLLK  244
            +T LISSH+LSEI+ +   IGII+ G L +++ + +L N ++  I I T++   + +LL+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NMNTSSKIECFDGGIRI-KIKKGNFQNINKLLVSNDVNVENLHCSEISLEDYFFDVM  300
                 S I+  DG + I ++K ++  +IN +LV ++++V  ++    SLED F++++
Sbjct  244  TKGYMSLIQ--DGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

88) bcrA in NC_009698


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  207 bits (770),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 129/297 (44%), Positives = 213/297 (72%), Gaps = 4/297 (1%)

Query  6    LLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGKSTTIKSIMGLIKPTSGKVII  65
            ++ T+ L+KEY++   V+++++ V +G VYGFLGPNGAGKSTT+K ++GL KPT G++ I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   NGYDV-EKDSEKAIEKIGTMVEAPSFYGGLSGYKNLILMANLYGVPKKRVDEVLEMVRLT  124
             G ++ EK+    +  IG+++E+PS+YG L+G  N+ +M  L ++PKK V+E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  DSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNGLDPQGIKDIRELIQDLSKKYH  184
            +  +K+VS+YSLGMKQRLGIA A+++ P+++ILDEPTNGLDP GI +IRELI+ L+ KY 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  VTFLISSHILSEIQAVCNRIGIIEKGSLKIEGYVEELLNTDEEVIEIYTREKEKTSRLLK  244
            +T LISSH+LSEI+ +   IGII+ G L +++ + EL N ++  I I T++   + +LL+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NMNTFSKIECFESGIRI-KIKKGNFQNINKLLISNDVNVENLHCSETSLENYFFDVM  300
                 S I+  ++ + I ++K ++  +IN +L+ ++++V  ++    SLE+ F++++
Sbjct  244  TKGYMSLIQ--DGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

89) bcrA in NC_010520


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  207 bits (768),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 132/297 (45%), Positives = 210/297 (71%), Gaps = 4/297 (1%)

Query  6    LLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGKSTTIKSIMGLIKPTLGKIII  65
            ++ T+ L+KEY++   V+++++ V +G VYGFLGPNGAGKSTT+K ++GL KPT G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   NGYDMR-KDSEKAIEKIGAMVEAPSFYGGLSGYKNLILMANLYGVPKKRVGEVLQMVRLT  124
             G ++  K+    +  IG+++E+PS+YG L+G  N+ +M  L ++PKK V E L++VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  DSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNGLDPQGIKDIRELIQDLSKKYH  184
            +  +K+VS+YSLGMKQRLGIA A+++ P+++ILDEPTNGLDP GI +IRELI+ L+ KY 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  VTFLISSHILSEIQAVCNRIGIIEKGNLKVQGYVEELLNADEEVIEIYTREKEKTSRLLT  244
            +T LISSH+LSEI+ +   IGII+ G+L  Q+ + EL N ++  I I T++   + +LL 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NMNTFSKIECFEGGIRV-KIKKGNFQNINKLLVSNDVSVENIHCSETSLENYFFDVM  300
                 S I+  +G + + ++K ++  +IN +LV +++ V  I+    SLE+ F++++
Sbjct  244  TKGYMSLIQ--DGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

90) Slin_2202 in NC_013730


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  207 bits (768),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 119/279 (43%), Positives = 201/279 (73%), Gaps = 1/279 (0%)

Query  20   LSGIDLKVPEHSIYGFLGPNGAGKTTTMRLVLGLLTSQAGEINIFGRPLAA-NRLAILRK  78
            + +IDL+VP+ ++YGFLGPNGAGK+TT++++LGL  +  G+INI+G+ L   NR++IL+ 
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSLIEMPSFYAHLTVTENLRILQSIYRTPVSRIQYVLDITGLNHTGAKPVGKFSLGMKQ  138
            IGSLIE PS+Y+HLT  EN+ I+Q +   P   ++  L I  L++   K V+++SLGMKQ
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQ  139

Query  139  RFGIAASLLHSPELLILDEPTNGLDPNGMIEVWELLRSLNRQEGLSIFISSHLLAEIERR  198
            R+GIA +++  P LLILDEPTNGLDP G+ E++EL++SL  + G++++ISSHLL+EI++ 
Sbjct  140  RLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQI  199

Query  199  VTHLGIIHKGELLFQGRLDELQSQAMQYTILSTSDPERALKLVQPFDDTAFIDERQLHTK  258
             T +GII+ GEL+FQ+ + EL++++     + T +   A KL++  +  ++I++  L   
Sbjct  200  ATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIE  259

Query  259  LLSADSIAAMSRLLVQHEVDLYQITTQQEDLEHLFMHLI  297
             L    +A ++ +LV+ ++D+++I  ++  LE++F++L+
Sbjct  260  NLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

91) bcrA in NC_015278


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  206 bits (767),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 135/304 (45%), Positives = 212/304 (70%), Gaps = 13/304 (4%)

Query  1    MTNIIELKNLKKDFNGHHSVDLDRLTVRKGEIYGFLGPNGAGKTTTMKMILSLIPPSSGQ  60
            M  II  + L K++N    V    L V +G +YGFLGPNGAGK+TT+KM+L+L  P+ G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IEVGGQSILENR--DYLNDIGSMIEEPSYYPNLTGYENLLVFQKMLGFDKRNIWKTLELV  118
            I++ G+ + E+     L+DIGS+IE PSYY +LTG EN+ + Q++L++ K+N+  +L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  119  GLAEEKNQKKLAKDYSLGMKQRLALAFALVKQPKILLLDEPTNGLDPSGIHEVRELIINL  178
             L ++KN+K    +YSLGMKQRL++A A++K PK+L+LDEPTNGLDP+GI+E+RELI +L
Sbjct  121  RLENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  179  AKTQGLTVFISSHILSEIEQMADRVGIINQGRLVYEGEIDQI--KANHWIEFRGEFECQA  236
            +   G+TV+ISSH+LSEI+Q+A  +GIIN+G LV+++ I ++  +++  I ++   +  +
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTK-NVVS  237

Query  237  LERLLSQYYGPNDFE--VADHLLKIKTTTDDKVAMVAKALVETGFPLFRIESKQESLEDI  294
             ++LL+     +++   + D  L I    D  VA +   LV++ + +FRIE  + SLEDI
Sbjct  238  AQKLLN----TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDI  293

Query  295  FLQL  298
            FL+L
Sbjct  294  FLEL  297

92) bcrA in NC_012563


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  205 bits (764),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 130/297 (44%), Positives = 212/297 (72%), Gaps = 4/297 (1%)

Query  6    LLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGKSTTIKSIMGLIKPTSGKV-I  64
            ++ T+ L+KEY++   V+++++ V +G VYGFLGPNGAGKSTT+K ++GL KPT G++ I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   INRYDVEKDSEKAIEKIGTMVEAPSFYGGLSGYKNLILMANLYGVPKKRVDEVLEMVRLT  124
            + +   EK+    +  IG+++E+PS+YG L+G  N+ +M  L ++PKK V+E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  DSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNGLDPQGIKDIRELIQDLSKKYH  184
            +  +K+VS+YSLGMKQRLGIA A+++ P+++ILDEPTNGLDP GI +IRELI+ L+ KY 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  VTFLISSHILSEIQAVCNRIGIIEKGSLKIEGYVEDLLNTDEELIEIYTREKEKTSRLLK  244
            +T LISSH+LSEI+ +   IGII+ G L +++ + +L N ++  I I T++   + +LL+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NMNTSSKIECFEGGIRI-KIKKGNFQNVNKILISNGVNVENIYCKKNSLEDYFFNVM  300
                 S I+  +G + I ++K ++  ++N +L+ + ++V  I   K+SLED F++++
Sbjct  244  TKGYMSLIQ--DGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

93) bcrA in NC_012658


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  205 bits (763),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 130/297 (44%), Positives = 210/297 (71%), Gaps = 4/297 (1%)

Query  6    LLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGKSTTIKSIMGLIKPTSGKVII  65
            ++ T+ L+KEY++   V+++++ V +G VYGFLGPNGAGKSTT+K ++GL KPT G++ I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   NGYDVR-KDSEKAIEKIGAMVEAPSFYGGLSGYKNLILMANLYGVSKKRVDEVLEMVRLT  124
             G ++  K+    +  IG+++E+PS+YG L+G  N+ +M  L +++KK V+E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  DSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNGLDPQGIKDIRELIQDLSKKYH  184
            +  +K+VS+YSLGMKQRLGIA A+++ P+++ILDEPTNGLDP GI +IRELI+ L+ KY 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  VTFLISSHILSEIQAVCNRIGIIEKGSLKVQGYVEDLLNTDEEVIEIYTKEKEKTSRLLK  244
            +T LISSH+LSEI+ +   IGII+ G L  Q+ + +L N ++  I I TK+   + +LL+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NMNTSSKIECFEGGIRV-KIKKGNFQNINKLLVSNDVSVENIHCSETSLENYFFDVM  300
                 S I+  +G + + ++K ++  +IN +LV +++ V  I+    SLE+ F++++
Sbjct  244  TKGYMSLIQ--DGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

94) Snas_0812 in NC_013947


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  205 bits (761),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 121/299 (41%), Positives = 193/299 (65%), Gaps = 9/299 (3%)

Query  1    MNLPVETRKLTKKYGPITAVDALDLTVRPGEVYGFLGPNGAGKTTTLRMLLGLIKASSGT  60
            M++ + T++L+K Y  I  V  +DL V  G VYGFLGPNGAGK+TTL+MLLGL K++ G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ATVLGRKPGTADH---LSRVGALIEGPSFYPYLSGRSNLRVMAKYAGVPDSRVSEVLELV  117
              +LG+     ++   L  +G+LIE+PS+Y  L+G  N+ +M +  ++P   V+E L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  118  DLAQRGKDRYSTYSLGMKQRLGVAAALLKEPQLLILDEPTNGLDPQGMADMRTLIRGLGS  177
             L ++ + + S YSLGMKQRLG+A A++K P+LLILDEPTNGLDP G+ ++R LI++L  
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  178  A-GCTVLLSSHLLGEVQQICDRVGIVSGGRLITESTVADLRAAQHVRVTATPLDKAASVA  236
              G TVL+SSHLL+E++QI   +GI++ G L+ + ++ +L+   + +++     K    A
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT--KNVVSA  238

Query  237  RELLGVEAVR--VVDNHLEL-AVEADQTPWLNAELVKADVAVSELRSHERDLEDIFFEL  292
            + LL   +    + D  L +  +   + + +N+ LV +++ V  +  H + LEDIF+EL
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

95) bcrA in NC_010337


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  203 bits (756),  Expect = 6e-54, Method: Compositional matrix adjust.
 Identities = 130/300 (44%), Positives = 217/300 (73%), Gaps = 10/300 (3%)

Query  7    ILEVSNLGKVYNGTWAVKSLNLSVRTGEIYGFLGRNGAGKTTTIRMIMGLIRPSQGQIRL  66
            I+    L+K YN    VK ++L V  G +YGFLG NGAGK+TT++M++GL +P+QG+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  67   FGRP-KESFGQEMFRRIGSMIEYPGFYTHLTARENLLYNARMIGLPNLKAVDEILSFMGL  125
            +G+  +E     +++ IGS+IE P++Y HLT+ EN+    R+++LP+ K V+E L ++ L
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKIVRL  122

Query  126  GQAADKQVNQFSLGMKQRLGIARALLHEPELLILDEPTNGLDPAGIREIRHIIRDLS-KY  184
             +  +K+V+Q+SLGMKQRLGIA A++  P LLILDEPTNGLDPAGI EIR++I+ L+ KY
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  185  RNITIFVSSHILPEIEQLADRVGIIHQGQLVEEIAMDELERKGKQYLTVKSSNPHRAVQI  244
              +T+++SSH+L+EI+Q+A  +GII++G+LV + ++ EL+ +G+  +++K+ N   A ++
Sbjct  183  -GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  245  LEEKLRIQQLRLLDDGEIQVFEQLEQPHA--MNRVLVEAGVDVFHLSVQKETLEDRFMRL  302
            L+ K     + L++DG + + E+L +++   +N +LV++ +DVF++  +K +LED F+ L
Sbjct  242  LNTK---GYMSLIQDGYLTI-ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

96) bcrA in NC_017297


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  203 bits (755),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 128/297 (44%), Positives = 210/297 (71%), Gaps = 4/297 (1%)

Query  6    LLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGKSTTIKSIMGLIKPTSGKVII  65
            ++ T+ L+KEY++   V+++++ V +G VYGFLGPNGAGKSTT+K ++GL KPT G++ I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   NGYDV-EKDSEKAIEKIGTMVEAPSFYGGLSGYKNLILMANLYGVPKKRVDEVLEMVRLT  124
             G ++ EK+    +  IG+++E+PS+YG L+G  N+ +M  L ++PKK V+E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  DSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNGLDPQGIKDIRELIQDLSKKYH  184
            +  +K+VS+YSLGMKQRLGIA A+++ P+++ILDEPTNGLDP GI +IRELI+ L+ KY 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  VTFLISSHILSEIQAVCNRIGIIEKGSLKIEGYVEDLLNTDEEVIEIYTREKEKTSRLLK  244
            +T LISSH+LSEI+ +   IGII+ G L +++ + +L N ++  I I T++   + +LL+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NMNTSSKI-ECFEggikikikkgNFQNINKLLISNDVNVENLHCSETSLEDYFFDVM  300
                 S I + +      ++K ++  +IN +L+ ++++V  ++    SLED F++++
Sbjct  244  TKGYMSLIQDGY--LTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

97) bcrA in NC_009699


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  203 bits (755),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 128/297 (44%), Positives = 210/297 (71%), Gaps = 4/297 (1%)

Query  6    LLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGKSTTIKSIMGLIKPTSGKVII  65
            ++ T+ L+KEY++   V+++++ V +G VYGFLGPNGAGKSTT+K ++GL KPT G++ I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   NGYDV-EKDSEKAIEKIGTMVEAPSFYGGLSGYKNLILMANLYGVPKKRVDEVLEMVRLT  124
             G ++ EK+    +  IG+++E+PS+YG L+G  N+ +M  L ++PKK V+E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  DSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNGLDPQGIKDIRELIQDLSKKYH  184
            +  +K+VS+YSLGMKQRLGIA A+++ P+++ILDEPTNGLDP GI +IRELI+ L+ KY 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  VTFLISSHILSEIQAVCNRIGIIEKGSLKIEGYVEDLLNTDEEVIEIYTREKEKTSRLLK  244
            +T LISSH+LSEI+ +   IGII+ G L +++ + +L N ++  I I T++   + +LL+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NMNTSSKI-ECFEggikikikkgNFQNINKLLISNDVNVENLHCSETSLEDYFFDVM  300
                 S I + +      ++K ++  +IN +L+ ++++V  ++    SLED F++++
Sbjct  244  TKGYMSLIQDGY--LTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

98) mcdF in NC_016749


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  202 bits (749),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 129/301 (43%), Positives = 209/301 (70%), Gaps = 7/301 (2%)

Query  1    MNNIIELKKVKKVYKDITTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVDPTSGE  60
            M+ II  +++ K Y+ I  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IFVNKKDIR-KDK-NYLSQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDENNIWPTLELV  118
            I +  K++  K++ + L +IGS+IE PSYY +LTG EN+ + Q+++++  +N+  +L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  119  GLADEKNRKKLVKAYSLGMKQRLSLAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVEL  178
             L ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L
Sbjct  121  RLENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  179  AKEKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQSNIV  238
            +   G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +   N+V
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVV  236

Query  239  HTLVELGTVEILG-ASTSHVKLSNIDNNQLANVVSYLTENGYRIFRVVRESETLEDIFLS  297
             +   L T   ++    + + + N+ ++++A++ + L ++   +FR+  +  +LEDIFL 
Sbjct  237  SAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLE  296

Query  298  L  298
            L
Sbjct  297  L  297

99) CA_C0288 in NC_003030


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (745),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 113/220 (52%), Positives = 172/220 (79%), Gaps = 1/220 (0%)

Query  5    VVEINNLSKTYRGFNAVNNINLNIREGRIYGFLGPNGAGKSTTIRMILGLIKNSSGSIKI  64
            ++  + LSK Y  +  V++I+L + +G +YGFLGPNGAGKSTT++M+LGL K + G+I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKNLKE-NRAEILKNVGALVESPSYYGHLNAYENLKIWSYIKGVDKNAIDEVLKLVNLY  123
            +GK+L+E NR  ILK++G+L+ESPSYYGHL + EN+ I   + ++ K+ ++E LK+V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  EHRKKKVSKFSLGMKQRLGIAQALIGNPELIILDEPTNGLDPMGIKEIRNLIVNLAKKHN  183
            ++++KKVS++SLGMKQRLGIA A++  P L+ILDEPTNGLDP GI EIR+LI +L+ K  
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  KTIIISSHILSEMELMIDDVGIINKGTLLYEGSLSNLKSK  223
             T++ISSH+LSE++ +   +GIIN G L++++S+ +L ++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

100) bcrA in NC_015687


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (745),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 113/220 (52%), Positives = 172/220 (79%), Gaps = 1/220 (0%)

Query  5    VVEINNLSKTYRGFNAVNNINLNIREGRIYGFLGPNGAGKSTTIRMILGLIKNSSGSIKI  64
            ++  + LSK Y  +  V++I+L + +G +YGFLGPNGAGKSTT++M+LGL K + G+I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKNLKE-NRAEILKNVGALVESPSYYGHLNAYENLKIWSYIKGVDKNAIDEVLKLVNLY  123
            +GK+L+E NR  ILK++G+L+ESPSYYGHL + EN+ I   + ++ K+ ++E LK+V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  EHRKKKVSKFSLGMKQRLGIAQALIGNPELIILDEPTNGLDPMGIKEIRNLIVNLAKKHN  183
            ++++KKVS++SLGMKQRLGIA A++  P L+ILDEPTNGLDP GI EIR+LI +L+ K  
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  KTIIISSHILSEMELMIDDVGIINKGTLLYEGSLSNLKSK  223
             T++ISSH+LSE++ +   +GIIN G L++++S+ +L ++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

101) CEA_G0295 in NC_017295


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (745),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 113/220 (52%), Positives = 172/220 (79%), Gaps = 1/220 (0%)

Query  5    VVEINNLSKTYRGFNAVNNINLNIREGRIYGFLGPNGAGKSTTIRMILGLIKNSSGSIKI  64
            ++  + LSK Y  +  V++I+L + +G +YGFLGPNGAGKSTT++M+LGL K + G+I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGKNLKE-NRAEILKNVGALVESPSYYGHLNAYENLKIWSYIKGVDKNAIDEVLKLVNLY  123
            +GK+L+E NR  ILK++G+L+ESPSYYGHL + EN+ I   + ++ K+ ++E LK+V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  EHRKKKVSKFSLGMKQRLGIAQALIGNPELIILDEPTNGLDPMGIKEIRNLIVNLAKKHN  183
            ++++KKVS++SLGMKQRLGIA A++  P L+ILDEPTNGLDP GI EIR+LI +L+ K  
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  184  KTIIISSHILSEMELMIDDVGIINKGTLLYEGSLSNLKSK  223
             T++ISSH+LSE++ +   +GIIN G L++++S+ +L ++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

102) SSU05_0894 in NC_009442


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (742),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 131/299 (44%), Positives = 211/299 (71%), Gaps = 7/299 (2%)

Query  1    MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVTPTSGEIF  60
            M++  ++L K Y+ +  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INKKDIRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGL  118
            I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLAK  178
             ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+ 
Sbjct  123  ENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  179  EKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQT  238
              G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVSA  238

Query  239  LVELGTVEILS-ASESQVTlrdldndrladlVSYLIENGYRIFRVVRESETLEDIFLNL  296
               L T   +S   ++ +T+ +L +  +A + + L+++   +FR+  +  +LEDIFL+L
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

103) SSUA7_0828 in NC_017622


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (742),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 131/299 (44%), Positives = 211/299 (71%), Gaps = 7/299 (2%)

Query  1    MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVTPTSGEIF  60
            M++  ++L K Y+ +  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INKKDIRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGL  118
            I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLAK  178
             ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+ 
Sbjct  123  ENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  179  EKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQT  238
              G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVSA  238

Query  239  LVELGTVEILS-ASESQVTlrdldndrladlVSYLIENGYRIFRVVRESETLEDIFLNL  296
               L T   +S   ++ +T+ +L +  +A + + L+++   +FR+  +  +LEDIFL+L
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

104) SSUBM407_1013 in NC_012926


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (742),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 131/299 (44%), Positives = 211/299 (71%), Gaps = 7/299 (2%)

Query  1    MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVTPTSGEIF  60
            M++  ++L K Y+ +  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INKKDIRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGL  118
            I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLAK  178
             ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+ 
Sbjct  123  ENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  179  EKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQT  238
              G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVSA  238

Query  239  LVELGTVEILS-ASESQVTlrdldndrladlVSYLIENGYRIFRVVRESETLEDIFLNL  296
               L T   +S   ++ +T+ +L +  +A + + L+++   +FR+  +  +LEDIFL+L
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

105) SSGZ1_0860 in NC_017617


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (742),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 131/299 (44%), Positives = 211/299 (71%), Gaps = 7/299 (2%)

Query  1    MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVTPTSGEIF  60
            M++  ++L K Y+ +  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INKKDIRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGL  118
            I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLAK  178
             ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+ 
Sbjct  123  ENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  179  EKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQT  238
              G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVSA  238

Query  239  LVELGTVEILS-ASESQVTlrdldndrladlVSYLIENGYRIFRVVRESETLEDIFLNL  296
               L T   +S   ++ +T+ +L +  +A + + L+++   +FR+  +  +LEDIFL+L
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

106) SSUJS14_0962 in NC_017618


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (742),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 131/299 (44%), Positives = 211/299 (71%), Gaps = 7/299 (2%)

Query  1    MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVTPTSGEIF  60
            M++  ++L K Y+ +  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INKKDIRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGL  118
            I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLAK  178
             ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+ 
Sbjct  123  ENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  179  EKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQT  238
              G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVSA  238

Query  239  LVELGTVEILS-ASESQVTlrdldndrladlVSYLIENGYRIFRVVRESETLEDIFLNL  296
               L T   +S   ++ +T+ +L +  +A + + L+++   +FR+  +  +LEDIFL+L
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

107) SSU0835 in NC_012925


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (742),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 131/299 (44%), Positives = 211/299 (71%), Gaps = 7/299 (2%)

Query  1    MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVTPTSGEIF  60
            M++  ++L K Y+ +  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INKKDIRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGL  118
            I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLAK  178
             ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+ 
Sbjct  123  ENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  179  EKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQT  238
              G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVSA  238

Query  239  LVELGTVEILS-ASESQVTlrdldndrladlVSYLIENGYRIFRVVRESETLEDIFLNL  296
               L T   +S   ++ +T+ +L +  +A + + L+++   +FR+  +  +LEDIFL+L
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

108) YYK_03945 in NC_018526


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (742),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 131/299 (44%), Positives = 211/299 (71%), Gaps = 7/299 (2%)

Query  1    MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVTPTSGEIF  60
            M++  ++L K Y+ +  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INKKDIRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGL  118
            I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLAK  178
             ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+ 
Sbjct  123  ENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  179  EKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQT  238
              G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVSA  238

Query  239  LVELGTVEILS-ASESQVTlrdldndrladlVSYLIENGYRIFRVVRESETLEDIFLNL  296
               L T   +S   ++ +T+ +L +  +A + + L+++   +FR+  +  +LEDIFL+L
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

109) NJAUSS_0917 in NC_020526


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (742),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 131/299 (44%), Positives = 211/299 (71%), Gaps = 7/299 (2%)

Query  1    MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVTPTSGEIF  60
            M++  ++L K Y+ +  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INKKDIRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGL  118
            I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLAK  178
             ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+ 
Sbjct  123  ENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  179  EKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQT  238
              G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVSA  238

Query  239  LVELGTVEILS-ASESQVTlrdldndrladlVSYLIENGYRIFRVVRESETLEDIFLNL  296
               L T   +S   ++ +T+ +L +  +A + + L+++   +FR+  +  +LEDIFL+L
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

110) SSUSC84_0797 in NC_012924


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (742),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 131/299 (44%), Positives = 211/299 (71%), Gaps = 7/299 (2%)

Query  1    MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVTPTSGEIF  60
            M++  ++L K Y+ +  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INKKDIRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGL  118
            I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLAK  178
             ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+ 
Sbjct  123  ENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  179  EKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQT  238
              G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVSA  238

Query  239  LVELGTVEILS-ASESQVTlrdldndrladlVSYLIENGYRIFRVVRESETLEDIFLNL  296
               L T   +S   ++ +T+ +L +  +A + + L+++   +FR+  +  +LEDIFL+L
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

111) SSU12_0835 in NC_017619


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  200 bits (742),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 131/299 (44%), Positives = 211/299 (71%), Gaps = 7/299 (2%)

Query  1    MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTTMKMILSLVTPTSGEIF  60
            M++  ++L K Y+ +  V    + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INKKDIRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVGL  118
            I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLAK  178
             ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+ 
Sbjct  123  ENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  179  EKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQT  238
              G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVSA  238

Query  239  LVELGTVEILS-ASESQVTlrdldndrladlVSYLIENGYRIFRVVRESETLEDIFLNL  296
               L T   +S   ++ +T+ +L +  +A + + L+++   +FR+  +  +LEDIFL+L
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

112) bcrA in NC_021362


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  199 bits (740),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 132/304 (44%), Positives = 217/304 (72%), Gaps = 10/304 (3%)

Query  8    LSTIIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQ  67
            +  II+T  L+K Y     V ++++ V QG +YGFLG NGAGK+TT++MLLGL KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  68   IEIFGENFF-KNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHKKNAIDEVLEI  126
            I+I+G ++  KN+  IL+ IGS++E P++Y++LT+ EN+ I  +++++ KKN ++E L I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  127  VGLQHETKKLVGKFSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRRLIHSLA  186
            V L+++ +K V+++SLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  187  KERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKRNRKYLEFQLSDQNKAV  246
                +T++ISSH+LSEI+Q+   +GII++G L+ + ++ +L +R +     Q++ + K V
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQS----QIAIKTKNV  235

Query  247  VLMEQHFDIHDY-EVHQDGIIRVYSHL--GQQGKLNKLFVENGIDVLKITMSEDSLEDYF  303
            V  ++ ++  +Y  + QDG + +  +L  ++ +K+N ++V++ IDV++I     SLED F
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTI-ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

Query  304  VKLI  307
            + L+
Sbjct  295  LELL  298

113) CLJU_c06490 in NC_014328


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  199 bits (738),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 134/302 (45%), Positives = 213/302 (71%), Gaps = 10/302 (3%)

Query  1    MDDILKTYNLTKEFKHFCAVKNLNIHIKKGDIYGFLGQNGAGKTTTIRMIMGLIKPTSGE  60
            M+ I++T  L+KE++ +  VK++++++ +G +YGFLG NGAGK+TT++M++GL KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IELFSEKTSNRK---VLERIGSMIEYPGFYPNLTAGENLEIHRRMMGVQGKNCIDETLKV  117
            I++++   ++++   +L  IGS+IE P++Y +LT+ EN+ I +R++++  KN ++E+LK+
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGISDVKNKKVKEFSLGMKQRLGIARALLHHPEFLILDEPTNGLDPIGIKEIRELIIDLC  177
            V + + KNKKV ++SLGMKQRLGIA A++  P +LILDEPTNGLDP GI EIRELI  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  178  KKQGITFLISSHILSEVQQMANKIGIIHKGELLEEISYDELQRRNRHYINIKVNNDKKAS  237
             K G+T LISSH+LSE++Q+A  IGII+ GEL+ + S  EL+ R +  I IK +N   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA-  238

Query  238  FILEEKLGIKDYVIWGKNNFRVYEKLQ--EISNINKALVSNDLLVDEICLKVDSLEDYFI  295
               +  L  K+Y+   ++ +   E+L+  ++++IN  LV +++ V  I     SLED F+
Sbjct  239  ---QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  296  KL  297
             L
Sbjct  296  EL  297

114) bcrA in NC_010516


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  198 bits (736),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 126/297 (43%), Positives = 208/297 (71%), Gaps = 4/297 (1%)

Query  6    LLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGKSTTIKSIMGLIKPTSGKVII  65
            ++ T+ L+KEY++   V+++++ V +G VYGFLGPNGAGKSTT+K ++GL KPT G++ I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   NGYDV-EKDSEKAIEKIGTMVEAPSFYGGLSGYKNLILMANLYGASKERVDEVLEMVRLT  124
             G ++ EK+    +  IG+++E+PS+YG L+G  N+ +M  L + +K  V+E L +VRL 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  125  DSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNGLDPQGIKDIRELIQDLSKKYH  184
            +  +K+VS+YSLGMKQRLGIA A+++ P+++ILDEPTNGLDP GI +IRELI+ L+ KY 
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  VTFLVSSHILSEIQAVCNRIGIIEKGSLKIEGYVEELLNTDEEVIEIYTREKEKTSRLLK  244
            +T L+SSH+LSEI+ +   IGII+ G L +++ + EL N ++  I I T++   + +LL+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  245  NMNTSSKI-ECFEggikikikkgNFQNINKLLISNDVNVENLHCSETSLEDYFFDVM  300
                 S I + +      ++K ++  +IN +L+ ++++V  ++    SLED F++++
Sbjct  244  TKGYMSLIQDGY--LTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

115) CD630_06450 in NC_009089


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  198 bits (734),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 206/301 (69%), Gaps = 8/301 (2%)

Query  1    MNYIIETHQLKKIYKDKAVVNAVNIHVKKGEIYGFVGPNGAGKSTVMKMLLNLVKPNSGE  60
            M+ II T++L K Y+    V+ ++++V +G +YGF+GPNGAGKST +KMLL L KP  G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IVMFGKKVAETD-FEILKKIGTIIENPYFYENLTAKQNLDLHCEYMGYYNKEHISEVLEC  119
            I ++GK + E + + ILK IG++IE+P +Y +LT+ +N+ +    ++   K +++E L  
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  120  VGLSKQSNKKVSKYSLGMKQRLAIARAILTKPELLILDEPINALDPEGIREMRELFRKLN  179
            V L +Q NKKVS+YSLGMKQRL+IA AI+  P LLILDEP N+LDP GI E+REL++ L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  TDYGITIFISSHILSEVEQIADTIGIIQDGKLIKEISMSDIHKYQTDYVEVDVDNVELAG  239
              YG+T++ISSH+LSE++QIA +IGII++G L+ + S+ ++H+     + +   NV  A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  YLLE-KEFGIKDFKITSESCIEIYDLR-KDVKEISKIFIQNQIGINSIGRKQSSLEDYFF  297
             LL+ K +      +  ++ + I +L+  DV  I+ ++++++I++  I   + SLED F+
Sbjct  240  KLLNTKGY----MSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  Q  298
            +
Sbjct  296  E  296

116) BCK_27648 in NC_018499


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  198 bits (735),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 119/297 (41%), Positives = 211/297 (72%), Gaps = 3/297 (1%)

Query  5    ILNIKGLHKNYKEKQVLKGIDLTIEKGEIFGLLGPNGAGKSTFFKIILGLIEADEGTVEV  64
            I+  + L K+Y+    +K+IDL + +G ++G+LGPNGAGKST +K++LGL  + +G +++
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   LGMDI-QKNRIEILSKTGSLIEAPTFYEHLSGYENLLIASKMKHVHDKEHIKELLNLFKL  123
            LG ++ +KNRI IL   GSLIE+P++Y HL+G EN+ I  ++ ++  K +++E L++ +L
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKK-NVNEALKIVRL  122

Query  124  YEDRNRAFKKYSLGMKQRLGLAAAFINNPELLILDEPTNGLDPQGVYEVKELIKKAPKMF  183
             +++N+   +YSLGMKQRLG+A A+++ P LLILDEPTNGLDP G+ E++ELIK  P  +
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  184  NSTIILSSHILSEVEQMADHIGIIHHGEIKYQGllsslqnkqslnIVEVSVNNIALTDKL  243
              T+++SSH+LSE++Q+A  IGII+HGE+ +Q+ +  L+N+   +I  +  +N+  ++KL
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQI-AIKTKNVVSAQKL  241

Query  244  LKQSNYTFNVNNNIFSIEYYDEKSLNDIQQLLVTNQIFIQSFQTKKQNLEEAYLDIV  300
            L+   Y   +++  ++IE   +  +  I+ +LV ++I +  ++  K++LE+ +L+++
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

117) Hore_04730 in NC_011899


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  197 bits (733),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 138/305 (46%), Positives = 209/305 (69%), Gaps = 14/305 (4%)

Query  1    METIIETKNLSKHFGTEKAVDRINITVKKGDIYGFLGRNGAGKTTTIRMLLGLIKPTGGQ  60
            ME II T+ LSK++     V  I++ V +G +YGFLG NGAGK+TT++MLLGL KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IKIFGQNLY-TNRSRILKRIGSTIEFSGFYSNLSAVDNLRINAALIGVQKKEAIAEALEI  119
            I+I+G++L   NR  ILK IGS IE +++Y++L++++N+ I   L+++ KK+ + EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGLYDERNKKVGSFSLGMKQRLGIARAILHDPELLILDEPTNGLDPVGIKEIRKLIKTLA  179
            V L +++NKKV+ +SLGMKQRLGIA AI+  P LLILDEPTNGLDP GI EIR LIK+L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  EQKNITIFMSSHILSEVQQLATTIGIIHEGRLMEEINFSELRKRNRKYLELKVSDDAKTA  239
            E+  +T+++SSH+LSE++Q+AT+IGII++G L+ + ++ EL++R +  + +K  +   + 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  MLMEREFDITDYEIYPERVVRVYSCLEL-----AGKINTCLVKNGIEVSRIRLSEDNLED  294
             L++          Y   +   Y  +E       +KIN  LV + I+V RI     +LED
Sbjct  240  KLLNT-------KGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLED  292

Query  295  YFVKI  299
             F+ +
Sbjct  293  IFLEL  297

118) CXIVA_08040 in NC_015737


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  197 bits (733),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 212/301 (71%), Gaps = 5/301 (1%)

Query  1    MDYIIETENLTKRYGTATVVDKVNLHVPKGKIYGLLGRNGAGKTTAMKMMLQLAFPTEGT  60
            M+ II T+ L+K Y     V  ++L+VP+G +YG+LG NGAGK+T++KM+L LA PT+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VRLFGTNYKENIH-TLYSKVGSIIETPGFYSNLTGYENLQILAKLRGGVSKSGVEKALEV  119
            + ++G + +E+ + ++   +GS+IE+P++Y++LTG EN+ I+ +L + ++K  V+ AL +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKI  119

Query  120  VGLHKEKRKVFSDYSLGMKQRLGIAAAIMHEPELLILDEPINGLDPIGIVEIRSFLSELS  179
            V L+++K K  S+YSLGMKQRLGIA AIM  P LLILDEP NGLDP GI EIR ++  L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  HNHGITIFISSHVLSEIEQIADIIGVMHEGHLVEEVNISELHKRNRKYIQFDLSDSEIAG  239
            ++ G+T++ISSH+LSEI+QIA  IG++++G+LV + +I ELH+R +  I +   +   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  KILENHYHMTDFTVQDGTVRIYDFSQS-VGEINREFARNGLLVTRINDSEENLEDYFSKL  298
            K+L+    M+   +QDG + I ++ +S V+ IN  + ++ + V RI++   +LED F  L
Sbjct  240  KLLNTKGYMS--LIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

Query  299  I  299
            +
Sbjct  298  L  298

119) Bcer98_0262 in NC_009674


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  197 bits (730),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 127/304 (42%), Positives = 216/304 (72%), Gaps = 10/304 (3%)

Query  13   IHTIIKTTNLTKVYGKQKSVDHLNINVNKGEIYGFIGRNGAGKTTTIRMLLGLIKPTNGK  72
            ++ II+T  L+K Y K   V ++++ V +G +YGF+G NGAGK+TT++MLLGL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  73   IEIFGEDFT-KNQKDILRRIGSIVEVPGFYENLTAKENLLINAKIIGVHKKNAIEEALEI  131
            I+I+G ++  KN+  IL+ IGS++E P++Y +LT+ EN+ I  +++++ KKN ++EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  132  VGLQHETKKLVGKYSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIKTLA  191
            V L+++ +K V++YSLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LIK+L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  192  QERNITIFISSHILSEVEQLVDHMGIIHKGKLLEETSLDALRKMNRKYLEFQVNNDNKAA  251
            +   +T++ISSH+LSE++Q+   +GII+ G L+ + S+  L++  +     Q+    K  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQS----QIAIKTKNV  235

Query  252  LLLEKQFHIFDY-EVHDEGNIRVYSHF--GQQGQINKMFVQNDIEVLKIIMSEDRLEDYF  308
            +  +K ++  +Y  + ++G + +  ++  ++ ++IN M+V+++I+V++I      LED F
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTI-ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

Query  309  TKLV  312
              L+
Sbjct  295  LELL  298

120) scnF in NC_004350


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  196 bits (726),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 215/303 (71%), Gaps = 11/303 (3%)

Query  1    MDNVIELQNLTKVYNGVTTVDLKKITVHQGEIYGFLGPNGAGKTTTMKMILSLIAPTSGN  60
            M+ +I  Q L+K YN +  V    + V QG +YGFLGPNGAGK+TT+KM+L+L  PT GN
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   V--LVNDSNIKKDVAYLDQIGSMIEEPSYYPNLTGYENLLVFQKMLSFDKNNIWPTLELV  118
            +  L ++ N K+ ++ L +IGS+IE PSYY +LTG EN+ + Q++L + K+N+  +L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  119  GLADEKNTKKLVKAYSLGMKQRLALAFALVKRPKILLLDEPTNGLDPAGIHEIRELIVTL  178
             L ++KN K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI +L
Sbjct  121  RLENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  179  AKEKGLTVFisshilseiehiADRVGIINHGRLVYEGAIEAIQSNAWIEIGGDFSTGDIT  238
            +   G+TV+ISSH+LSEI++IA  +GIINHG LV++++I  +++ +  +I+  + T ++ 
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVV  236

Query  239  TA---LNEYGLVRVLDIAANKLTLGDFSNNDLADFVTYLVEKGFRIFRVVRETETLEDIF  295
            +A   LN  G + +  I    LT+ ++ ++D+A +   LV+  + +FR+  +  +LEDIF
Sbjct  237  SAQKLLNTKGYMSL--IQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

Query  296  LNL  298
            L+L
Sbjct  295  LEL  297

121) Apre_0642 in NC_013171


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 126/298 (43%), Positives = 217/298 (73%), Gaps = 7/298 (2%)

Query  1    MNKILEVNNLKKSYNNKTVLDIKSLE--IEEKTIYGLIGKNGAGKSTLMKLILGLVKKDE  58
            M+ I+  + L K YN+  ++ +K ++  + + ++YG++G NGAGKST +K++LGL K  +
Sbjct  1    MEMIIRTQRLSKEYNK--IFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQ  58

Query  59   GRIKVFGKEINSKNQKTFNQNFGALIESPSFYDHLSGYENLEIVCQLKGVNKEDIRKTLD  118
            G I+++GKE+N KN+ ++ +++G+LIESPS+Y+HL+G EN+ I+ +L ++ K ++  +L 
Sbjct  59   GNINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALK  118

Query  119  LVGLNNVGNKKARDYSLGMKQRLGIAIALIGSPKLLILDEPINGLDPQGIEEMRNLFKNI  178
            +V L+N  NKK  +YSLGMKQRLGIA+A++  PKLLILDEP NGLDP GIEE+R+L+K++
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  179  VKNTTTSILISSHILDEIEKISTHIGILREGNLVYNGSLEEYRRLHPPFISLRTSDNNKA  238
              +   ++LISSH+L EI++I+T IGI+ +G+LV+++S+ E +    + I+++T +   A
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA  238

Query  239  LELLDLD--QSSikgkkiilgkkTNPEIASIVNFL-HGKVDIYRIEEERESLEKLFIE  293
              LL+     S I++  + + +  ++++A I   L H+++D++RIEE++ SLE +F+E
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLE  296

122) CDBI1_03030 in NC_017179


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 206/301 (69%), Gaps = 8/301 (2%)

Query  1    MNYIIETHQLKKIYKDKAVVNDVNIHVKKGEIYGFVGPNGAGKSTVMKMLLNLVKPNSGE  60
            M+ II T++L K Y+    V+D++++V +G +YGF+GPNGAGKST +KMLL L KP  G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IVMFSKKVAETD-FEILKKIGTIIENPYFYENLTAKQNLDLHCEYMGYYNKEHISEVLEC  119
            I +++K + E + + ILK IG++IE+P +Y +LT+ +N+ +    ++   K +++E L  
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  120  VGLSKQSNKKVSKYSLGMKQRLAIARAILTKPELLILDEPINALDPEGIREMRELFRKLN  179
            V L +Q NKKVS+YSLGMKQRL+IA AI+  P LLILDEP N+LDP GI E+REL++ L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  TDYGITIFISSHILSEVEQIADTIGIIQDGKLIKEISMSDIHKYQTDYVEVDVDNVELAG  239
              YG+T++ISSH+LSE++QIA +IGII++G L+ + S+ ++H+     + +   NV  A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  YLLE-KEFGIKDFKITSESCIEIYDLR-KDVKEISKIFIKNQIGINSIGRKQSSLEDYFF  297
             LL+ K +      +  ++ + I +L+  DV  I+ +++ ++I++  I   + SLED F+
Sbjct  240  KLLNTKGY----MSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  Q  298
            +
Sbjct  296  E  296

123) CD196_0585 in NC_013315


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 206/301 (69%), Gaps = 8/301 (2%)

Query  2    MNYIIETHQLKKIYKDKAVVNDVNIHVKKGEIYGFVGPNGAGKSTVMKMLLNLVKPNSGE  61
            M+ II T++L K Y+    V+D++++V +G +YGF+GPNGAGKST +KMLL L KP  G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  62   IVMFSKKVAETD-FEILKKIGTIIENPYFYENLTAKQNLDLHCEYMGYYNKEHISEVLEC  120
            I +++K + E + + ILK IG++IE+P +Y +LT+ +N+ +    ++   K +++E L  
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  121  VGLSKQSNKKVSKYSLGMKQRLAIARAILTKPELLILDEPINALDPEGIREMRELFRKLN  180
            V L +Q NKKVS+YSLGMKQRL+IA AI+  P LLILDEP N+LDP GI E+REL++ L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  181  TDYGITIFISSHILSEVEQIADTIGIIQDGKLIKEISMSDIHKYQTDYVEVDVDNVELAG  240
              YG+T++ISSH+LSE++QIA +IGII++G L+ + S+ ++H+     + +   NV  A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  241  YLLE-KEFGIKDFKITSESCIEIYDLR-KDVKEISKIFIKNQIGINSIGRKQSSLEDYFF  298
             LL+ K +      +  ++ + I +L+  DV  I+ +++ ++I++  I   + SLED F+
Sbjct  240  KLLNTKGY----MSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  299  Q  299
            +
Sbjct  296  E  296

124) CDR20291_0567 in NC_013316


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 206/301 (69%), Gaps = 8/301 (2%)

Query  2    MNYIIETHQLKKIYKDKAVVNDVNIHVKKGEIYGFVGPNGAGKSTVMKMLLNLVKPNSGE  61
            M+ II T++L K Y+    V+D++++V +G +YGF+GPNGAGKST +KMLL L KP  G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  62   IVMFSKKVAETD-FEILKKIGTIIENPYFYENLTAKQNLDLHCEYMGYYNKEHISEVLEC  120
            I +++K + E + + ILK IG++IE+P +Y +LT+ +N+ +    ++   K +++E L  
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  121  VGLSKQSNKKVSKYSLGMKQRLAIARAILTKPELLILDEPINALDPEGIREMRELFRKLN  180
            V L +Q NKKVS+YSLGMKQRL+IA AI+  P LLILDEP N+LDP GI E+REL++ L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  181  TDYGITIFISSHILSEVEQIADTIGIIQDGKLIKEISMSDIHKYQTDYVEVDVDNVELAG  240
              YG+T++ISSH+LSE++QIA +IGII++G L+ + S+ ++H+     + +   NV  A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  241  YLLE-KEFGIKDFKITSESCIEIYDLR-KDVKEISKIFIKNQIGINSIGRKQSSLEDYFF  298
             LL+ K +      +  ++ + I +L+  DV  I+ +++ ++I++  I   + SLED F+
Sbjct  240  KLLNTKGY----MSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  299  Q  299
            +
Sbjct  296  E  296

125) Kfla_4303 in NC_013729


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  196 bits (726),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 122/296 (42%), Positives = 191/296 (65%), Gaps = 11/296 (3%)

Query  7    VQVQGLTKRYGETLAVDGVDLIVRPGEVYGFLGPNGAGKTTTLRILTGLIAPTSGRVEVL  66
            ++ Q L+K Y   + V ++DL V  G VYGFLGPNGAGK+TTL++L GL  PT G +++L
Sbjct  5    IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINIL  64

Query  67   G---GSPGQAQVLARTGSMIESPAFYPYLSGLDNLRLLAEYAEVPRTRVREVLELVDLAG  123
            G       +  +L   GS+IESP++Y  L+GL+N+ ++    ++P+  V E L +V L  
Sbjct  65   GKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLEN  124

Query  124  RAKDRFSTYSLGMKQRLGVAAALLKDPELVILDEPTNGLDPAGMRDMRRLIRELGSE-GR  182
            + + + S YSLGMKQRLG+A A++K P L+ILDEPTNGLDPAG+ ++R LI+ L    G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  183  TVVLSSHLLGEVQQVCDRVGIINGGRMVAEHDVEEL--RGQQELVIRARPLESAHSVLRE  240
            TV++SSHLL+E++Q+   +GIIN G +V ++ + EL  RGQ ++ I+++ + SA+ +L  
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN-  243

Query  241  VLGAEAVHLYDDT--VRAKVAPDRAAELNRLLVEAGIAVSELRSTERALEDVFFEL  294
                  + L +D      ++     A +N +LV++ I V  +    ++LED+F+EL
Sbjct  244  --TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

126) sivF in NC_015760


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  196 bits (726),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 131/280 (47%), Positives = 197/280 (71%), Gaps = 11/280 (3%)

Query  31   GLTVRKGEIYGFLGPNGAGKTTTMKMILSLIEPTSGSIEIMNTPINRSN--DYLKYIGSM  88
            +L V +G +YGFLGPNGAGK+TT+KM+L+L  PT G+I+I+   +N  N    LK IGS+
Sbjct  24   DLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSL  83

Query  89   IEEPSYYPNLTGYENLLVFQKMLGFKEENILKTLELVGLSEEKNRKKLVKAYSLGMKQRL  148
            IE PSYY +LTG EN+ + Q++L++   N+  +L +V L ++KN+K  V  YSLGMKQRL
Sbjct  84   IESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKK--VSQYSLGMKQRL  141

Query  149  ALAFALVKEPQILLLDEPTNGLDPSGIHEIRELIIRLAKDKGLTVFISSHILSEIEQIAD  208
            ++A A++K P++L+LDEPTNGLDP+GI+EIRELI  L+   G+TV+ISSH+LSEI+QIA 
Sbjct  142  GIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIAT  201

Query  209  RVGIINHGRLVYEGEIEKINT--NNWVEIEGKFDIEKLKNLFGNHFSN-RKVEYDAKLVK  265
             +GIINHG LV+++ I  ++   ++ + I  K  +   K L  + + +  +  Y    + 
Sbjct  202  SIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGY----LT  257

Query  266  IWNTNNEQIANIVRSLFELDFPIFRVEHKKENLEDIFLEL  305
            I N ++ ++A+I   L + ++ +FR+E+ K +LEDIFLEL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

127) CLJU_c22920 in NC_014328


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  195 bits (724),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 112/215 (53%), Positives = 167/215 (78%), Gaps = 5/215 (2%)

Query  6    LLETQKLAKVFKKDYAVNELDISIPRNHIYGLLGANGAGKSTTLKMLTGLLKPTSGKINF  65
            ++ TQ+L+K ++K + V+++D+ +P+  +YG+LG+NGAGKSTTLKML GL KPT G+IN+
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   DGHTWTRKD----LRNIGALIEQPPIYGNLTAEENLKVHTTLLGLPNKRIKEVLKIVDLT  121
             G     K+    L++IG+LIE P+ YG+LT+ EN+ +   LL+LP+K ++E LKIV L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  122  DTGKKEAKNFSMGMKQRLGIATAILNHPKLLILDEPTNGLDPIGIQDLRKLIKSFPEE-G  180
            +  +K   ++S+GMKQRLGIA AI++ PKLLILDEPTNGLDP GI+++R LIKS+PE  G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  181  MTVILSSHILAEVEQIVDYVGIMSHGILGYQGKVN  215
            MTV++SSH+L+E++QI   +GI++HG L +Q+ ++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

128) scnF in NC_013928


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 138/303 (46%), Positives = 214/303 (71%), Gaps = 8/303 (2%)

Query  1    MDNVIELQNLTKVYNGVTTVDLKKITVHQGEIYGFLGPNGAGKTTTMKMILSLIAPTSGN  60
            M+ +I  Q L+K YN +  V    + V QG +YGFLGPNGAGK+TT+KM+L+L  PT GN
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   V--LVNDSNIKKDVAYLDQIGSMIEEPSYYPNLTGYENLLVFQKMLSFDKNNIWPTLELV  118
            +  L ++ N K+ ++ L +IGS+IE PSYY +LTG EN+ + Q++L + K+N+  +L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  119  GLADEKNTKKLVKAYSLGMKQRLALAFALVKRPKILLLDEPTNGLDPAGIHEIRELIVTL  178
             L ++KN K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI +L
Sbjct  121  RLENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  179  AKEKGLTVFisshilseiehiADRVGIINHGRLVYEGAIEAIQSNAWIEIGGDFSTGDIT  238
            +   G+TV+ISSH+LSEI++IA  +GIINHG LV++++I  +++ +  +I+  + T ++ 
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVV  236

Query  239  TALNEYGEYGLVRVLDIAANKLTLGDFSNNDLADFVTYLVEKGFRIFRVVRETETLEDIF  298
            +A +     G + +  I    LT+ ++ ++D+A +   LV+  + +FR+  +  +LEDIF
Sbjct  237  SAQKLLNTKGYMSL--IQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

Query  299  LNL  301
            L+L
Sbjct  295  LEL  297

129) CKL_0964 in NC_009706


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 214/302 (71%), Gaps = 8/302 (2%)

Query  1    MDNILKTYNLSKKFKNFYAVDNLNMTIEKGDIYGFLGENGAGKTTTIRMIMGLIKSTSGE  60
            M+ I++T  LSK +++++ V ++++ + +G +YGFLG NGAGK+TT++M++GL K+T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IELFSQKVSSKNK-NLLQRIGSIIEYPGFYPNLTASENLEIHRRMMGVQEKDSIKNSLKV  119
            I+++++ ++ KN+ ++L+ IGS+IE P++Y +LT+ EN+ I +R++++  K+ ++++LK+
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGIGNVENKKVKEFSLGMKQRLGIARSLLHHPEFLILDEPTNGLDPTGIKEIRELIIDLA  179
            V + N  NKKV ++SLGMKQRLGIA +++  P +LILDEPTNGLDP+GI EIRELI  L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  HKQNITFLISSHILSEIQQMATKVGIIHKGVLLEEIPYDELKKRNRHYINIKVDKDKKSC  239
            +K  +T LISSH+LSEI+Q+AT +GII+ G L+ + +  EL +R +  I IK     K+ 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----KNV  235

Query  240  FILEEKLNIKDYTLWGKNNLRVYERLQ--EVSTINKVLVSNDILVEEICLKIDSLEDYFL  297
               +  LN K+Y    ++     E L+  +V+ IN +LV ++I V  I     SLED FL
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KL  299
             L
Sbjct  296  EL  297

130) CKR_0872 in NC_011837


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 214/302 (71%), Gaps = 8/302 (2%)

Query  1    MDNILKTYNLSKKFKNFYAVDNLNMTIEKGDIYGFLGENGAGKTTTIRMIMGLIKSTSGE  60
            M+ I++T  LSK +++++ V ++++ + +G +YGFLG NGAGK+TT++M++GL K+T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IELFSQKVSSKNK-NLLQRIGSIIEYPGFYPNLTASENLEIHRRMMGVQEKDSIKNSLKV  119
            I+++++ ++ KN+ ++L+ IGS+IE P++Y +LT+ EN+ I +R++++  K+ ++++LK+
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGIGNVENKKVKEFSLGMKQRLGIARSLLHHPEFLILDEPTNGLDPTGIKEIRELIIDLA  179
            V + N  NKKV ++SLGMKQRLGIA +++  P +LILDEPTNGLDP+GI EIRELI  L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  HKQNITFLISSHILSEIQQMATKVGIIHKGVLLEEIPYDELKKRNRHYINIKVDKDKKSC  239
            +K  +T LISSH+LSEI+Q+AT +GII+ G L+ + +  EL +R +  I IK     K+ 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----KNV  235

Query  240  FILEEKLNIKDYTLWGKNNLRVYERLQ--EVSTINKVLVSNDILVEEICLKIDSLEDYFL  297
               +  LN K+Y    ++     E L+  +V+ IN +LV ++I V  I     SLED FL
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KL  299
             L
Sbjct  296  EL  297

131) CbC4_6015 in NC_015418


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  191 bits (707),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 120/221 (55%), Positives = 167/221 (76%), Gaps = 5/221 (2%)

Query  3    EYFLETKNLTKKFKNQRAVDCINLKIKKGSIYGFLGPNGAGKSTTLKMITGLLYPTEGEI  62
            E ++ T+ L+K +++   V  I+L++ +G++YGFLGPNGAGKSTTLKM+ GL  PT+G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   IING----SKWTRHCLKDIGVLIESPAFYGNLTARENLKVHTTLLNLPDKRIDEVLSIVN  118
             I G     K     LKDIG LIESP++YG+LT+ EN+ +   LL+LP K ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LKNTGNKKSSEFSLGMKQRLGIAIALLNSPKLLILDEPTNGLDPLGIQELRDLIKSLKNK  178
            L N  NKK S++SLGMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+R+LIKSL +K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITIIFSSHILSEVSEVAEYIGIIYEGKLKYQEKIDKTQN  218
             G+T+++SSH+LSE+ ++A  IGII +G L +Q+ I   +N
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

132) AORI_1300 in NC_021252


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  191 bits (707),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 196/301 (66%), Gaps = 16/301 (5%)

Query  13   MNLPVDTDELTKRYGEQLAVDRMELTVLPGEIYGFLGPNGAGKTTTLRMLLGLVRPTSGS  72
            M++ + T+ L+K Y   + V  ++L V  G +YGFLGPNGAGK+TTL+MLLGL +PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  73   VRLFGRPPGD------LDGVGALIESPGFYPYLSGSDNLKVLARYSGTDPLRVGEVLAMV  126
            + ++G+   +      L ++G+LIESP++Y  L+G +N+ ++ R  +     V E L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  127  DLADRGKDRYSTYSLGMKQRLGVAAALLKDPRLLILDEPTNGLDPAGMADMRVLIRRLGA  186
             L ++ + + S YSLGMKQRLG+A A++K P+LLILDEPTNGLDPAG+ ++R LI+ L  
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  187  E-GCTVLLSSHLLGEVQQICDRVGVVSHGRLVAENTVAEL--RGGTVLHIESDEIARATG  243
              G TVL+SSHLL+E++QI   +G+++HG LV ++++ EL  RG + + I + ++  A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  244  LLRRWIGAENVRESGTGLDLTVEPERASWLNRE---LVTEGIAVRELHVRERDLEQVFFE  300
            LL    G  ++ + G    LT+E  + S + +    LV   I V  ++ + + LE++F+E
Sbjct  241  LLNTK-GYMSLIQDGY---LTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLE  296

Query  301  L  301
            L
Sbjct  297  L  297

133) Ccel_1161 in NC_011898


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  191 bits (707),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 129/301 (43%), Positives = 214/301 (72%), Gaps = 7/301 (2%)

Query  1    MDYILKTQNLCKLYKNKKAVNGVNINVSKGDIYGFLGQNGAGKTTTIRMILGLIKPTEGE  60
            M+ I++TQ L K Y++   V+++++ V++G +YGFLG NGAGK+TT++M+LGL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VFLFGERIFPGQNAHYGR-IGSVIETAGFYPNLTAVENLEIHRRLMGVTNKSYLEEALEI  119
            + ++G  +   +     + IGS+IE++++Y +LT++EN+ I +RL+++ +K+ ++EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  TGLTDVRNKRVKGFSLGMKQRLGISRALLHKPEFLILDEPTNGLDPVGIKEIRKLIQDLS  179
              L + +NK+V  +SLGMKQRLGI+ A++  P +LILDEPTNGLDP GI EIR LI+ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  MKRKITVLVSSHILSEIQQIASKIGIIHEGALLEEIDFESLKKKSRSYIEIKTSDDKKAS  239
             K  +TVL+SSH+LSEI+QIA+ IGII++G L+ +  +  L ++++S I IKT +   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  FLLEKRKITDYKVIEQGVIRVYEKLNESSI--FNRILSENGVEVSEIRVMNDTLEDYFLQ  297
             LL+ +   +Y  + Q+     E+L++S +  +N +L ++ ++V  I   + +LED FL+
Sbjct  240  KLLNTK---GYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLE  296

Query  298  L  298
            L
Sbjct  297  L  297

134) spaF in NC_017542


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  190 bits (706),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 107/217 (50%), Positives = 163/217 (76%), Gaps = 5/217 (2%)

Query  3    NIILQTKNLCKTFGRQQAVNNVALSIQENSVYGLLGPNGAGKSTTLKMLTGMLRPTAGEI  62
            ++I++T+ L K + +   V+++ L + + +VYG+LGPNGAGKSTTLKML G+ +PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   LFQGKPWSRKD----LAQIGALIEAPPLYENLTARENLKVRTTLLGLPDSRIDEVLSIVD  118
             + GK  + K+    L +IG+LIE+P+ Y +LT+ EN+ +   LL+LP   ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LTHTGKKRSGQFSMGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQEQRELIRSFPKR  178
            L +  +K+ +Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E RELI+S+P +
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVEQIVDHVGIIAGGVLAYQEAVT  214
             G+TV++SSH+LSE++QI   +GII  G L +Q+++ 
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

135) PPSC2_c2767 in NC_014622


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  190 bits (706),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 107/217 (50%), Positives = 163/217 (76%), Gaps = 5/217 (2%)

Query  3    NIILQTKNLCKTFGRQQAVNNVALSIQENSVYGLLGPNGAGKSTTLKMLTGMLRPTAGEI  62
            ++I++T+ L K + +   V+++ L + + +VYG+LGPNGAGKSTTLKML G+ +PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   LFQGKPWSRKD----LAQIGALIEAPPLYENLTARENLKVRTTLLGLPDSRIDEVLSIVD  118
             + GK  + K+    L +IG+LIE+P+ Y +LT+ EN+ +   LL+LP   ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LTHTGKKRSGQFSMGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQEQRELIRSFPKR  178
            L +  +K+ +Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E RELI+S+P +
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVEQIVDHVGIIAGGVLAYQEAVT  214
             G+TV++SSH+LSE++QI   +GII  G L +Q+++ 
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

136) Clo1100_2896 in NC_016791


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  190 bits (706),  Expect = 6e-50, Method: Compositional matrix adjust.
 Identities = 131/302 (44%), Positives = 219/302 (73%), Gaps = 9/302 (2%)

Query  1    MDYILKTNNLSKLYKNKKAVNGVNMNVAKGDIYGFLGQNGAGKTTTIRMIMGLIKPTEGE  60
            M+ I++T+ LSK Y++   V+++++ V++G +YGFLG NGAGK+TT++M++GL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VFLFGERISVGQHAHYGR-IGSVIETAGFYPNLTAVENLEIHRRLMGVTNKSYLEEALEI  119
            + ++G  ++  ++    + IGS+IE++++Y +LT++EN+ I +RL+++ +K+ ++EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  TGMTDVRNKRVKGFSLGMKQRLGISRALLHKPELLILDEPTNGLDPVGIKEIRKLIQDLS  179
              + + +NK+V  +SLGMKQRLGI+ A++  P LLILDEPTNGLDP GI EIR LI+ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  MKRKITVLVSSHILSEIQQIASKIGIIHEGTLLEEIDFESLKKKSRSYIQIKTGDDKKAS  239
             K  +TVL+SSH+LSEI+QIA+ IGII++G L+ +  +  L ++++S I IKT +   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  FLLEKMRITDY-KVIEQGVIRIYEKLNES--STFNRMLSENGVEVSEISVKNDTLEDYFL  296
             LL+     +Y  +I++G + I E+L++S  + +N ML ++ ++V  I   + +LED FL
Sbjct  240  KLLNT---KGYMSLIQDGYLTI-ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  297  KL  298
             L
Sbjct  296  EL  297

137) GYMC52_0293 in NC_014915


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  189 bits (700),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 118/219 (54%), Positives = 171/219 (79%), Gaps = 5/219 (2%)

Query  5    MLETRHISKAFGKQLAVDDVSMKVKKHTIYGLLGPNGAGKSTLLKMLTGLLRPTKGEIMI  64
            ++ T+++SK + K + V D+ ++V + ++YG+LGPNGAGKST LKML GL +PT+G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   NGHPWSRKD----LKDIGALIESPALYGNLTAHENLLVHAKLLHLPDSRIQEVLNIVGLE  120
             G   + K+    LKDIG+LIESP+ YG+LT+ EN+ +  +LL+LP   ++E L+IV LE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKKASQFSLGMKQRLGIAKALLNDPKLLILDEPTNGLDPLGIQDLRKLIKSFAEN-G  179
            N  +KK SQ+SLGMKQRLGIA A+++ PKLLILDEPTNGLDP GI+++R LIKS++E+ G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILSEVKQLADYIGIIQNGKLKYQGKIDESQD  218
            +TV++SSH+LSE+ Q+A  IGII++G L +Q+ I E ++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

138) GYMC61_1171 in NC_013411


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  189 bits (700),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 118/219 (54%), Positives = 171/219 (79%), Gaps = 5/219 (2%)

Query  5    MLETRHISKAFGKQLAVDDVSMKVKKHTIYGLLGPNGAGKSTLLKMLTGLLRPTKGEIMI  64
            ++ T+++SK + K + V D+ ++V + ++YG+LGPNGAGKST LKML GL +PT+G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   NGHPWSRKD----LKDIGALIESPALYGNLTAHENLLVHAKLLHLPDSRIQEVLNIVGLE  120
             G   + K+    LKDIG+LIESP+ YG+LT+ EN+ +  +LL+LP   ++E L+IV LE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKKASQFSLGMKQRLGIAKALLNDPKLLILDEPTNGLDPLGIQDLRKLIKSFAEN-G  179
            N  +KK SQ+SLGMKQRLGIA A+++ PKLLILDEPTNGLDP GI+++R LIKS++E+ G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILSEVKQLADYIGIIQNGKLKYQGKIDESQD  218
            +TV++SSH+LSE+ Q+A  IGII++G L +Q+ I E ++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

139) PPSC2_c5225 in NC_014622


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  189 bits (702),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 124/303 (41%), Positives = 207/303 (69%), Gaps = 8/303 (2%)

Query  1    MQYVIETKKLRKQFGMSVAVDDISLHVERGSIYGFLGENGAGKTTTIRMLMRLIEPTSGE  60
            M+ +I T++L K++     V DI L+V +G++YGFLG NGAGK+TT++ML+ L  PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VFLFGERL-EKNYPSIFSKIGTIIETPGLYENLSARDNLRICCKYMGMKDDGRIERTLTT  119
            + ++G  L EKN  SI+  IG++IE+P+ Y +L++ +N+ I  + +++     ++ +L  
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGLEHTGKKKFKDFSLGMKQRLGIARALVHDPELLILDEPTNGLDPSGIKEIRQLLKRLC  179
            V LE+  +KK  ++SLGMKQRLGIA A++  P LLILDEPTNGLDP+GI EIR+L+K L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  EEDGKTILISSHILSEIQQLATHIGIIHNGKLLAEDRLSRLEEGFEQYTDVKVDDAEAVQ  239
            E  G T+LISSH+LSEI+Q+AT IGII++G L+ +D +  L++  +    +K  +  + Q
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  AFLQEH--MKQLQSNVISPQQLRIHSQIENTAALNKQLIDHQFSVYEIHTTKQTLEEYFL  297
             +L+    M  +Q   ++ ++L+ +S++ +  ++   L++ ++ V+ I+  K++LE+ FL
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLK-DSDVAKINGM---LVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  TLI  300
             L+
Sbjct  296  ELL  298

140) potA3 in NC_017542


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  189 bits (700),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 123/303 (41%), Positives = 209/303 (69%), Gaps = 8/303 (2%)

Query  1    MQYVIETKKLRKQFGMSIAVDDISLHVEQGSIYGFLGENGAGKTTTIRMLMRLVEPTNGE  60
            M+ +I T++L K++   + V DI L+V QG++YGFLG NGAGK+TT++ML+ L  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VFLFGERL-EKSYPSIFSKIGTIIETPGLYENLSARDNLRICCTYMGVKDDGRIERTLTT  119
            + ++G  L EK+  SI+  IG++IE+P+ Y +L++ +N+ I    +++     ++ +L  
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGLEHTGKKKFKDFSLGMKQRLGIARALVHDPELLILDEPTNGLDPSGIKEIRQLLKKLC  179
            V LE+  +KK  ++SLGMKQRLGIA A++  P LLILDEPTNGLDP+GI EIR+L+K L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  EEDGKTILISSHILSEIQQLATHIGIIHNGKLLAEDRLSQLEEGFEQYTDLKVEDAKAVQ  239
            E  G T+LISSH+LSEI+Q+AT IGII++G L+ +D + +L++  +    +K  +  + Q
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  AFLQEH--IKQLQSNVISPQQLRIHSQIENTAALNKQLIDHQFSVYEIHTTKQTLEEYFL  297
             +L+    +  +Q   ++ ++L+ +S++ +  ++   L++ ++ V+ I+  K++LE+ FL
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLK-DSDVAKINGM---LVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  ALI  300
             L+
Sbjct  296  ELL  298

141) GC56T3_0348 in NC_014206


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  189 bits (703),  Expect = 6e-50, Method: Compositional matrix adjust.
 Identities = 117/219 (54%), Positives = 171/219 (79%), Gaps = 5/219 (2%)

Query  5    MLETRHISKAFGKQLAVDDVSIKVKKHTIYGLLGPNGAGKSTLLKMLTGLLRPTKGEIVI  64
            ++ T+++SK + K + V D+ ++V + ++YG+LGPNGAGKST LKML GL +PT+G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   NGHPWSRK----VLKDIGALIESPALYGNLTAYENLLVHAKLLHLPDSRIQEVLNIVGLE  120
             G   + K    +LKDIG+LIESP+ YG+LT+ EN+ +  +LL+LP   ++E L+IV LE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKKASQFSLGMKQRLGIAKALLNHPKLLILDEPTNGLDPLGIQDLRTLIKSFAEN-G  179
            N  +KK SQ+SLGMKQRLGIA A+++ PKLLILDEPTNGLDP GI+++R LIKS++E+ G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILSEVKQLADYIGIIQNGKLRYEGKIDESQD  218
            +TV++SSH+LSE+ Q+A  IGII++G L +++ I E ++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

142) ABC1210 in NC_006582


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  189 bits (702),  Expect = 7e-50, Method: Compositional matrix adjust.
 Identities = 119/217 (55%), Positives = 170/217 (79%), Gaps = 5/217 (2%)

Query  4    IMLETKQLSKRFGKQAAVAGVSLRVPKNSIYGLLGPNGAGKSTTLKMLTGILRPSSGEIL  63
            +++ T++LSK + K   V ++ LRVP+ ++YG+LGPNGAGKSTTLKML G+ +P+ G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  64   FDGSHWNR----SMLKDIGSLIEAPPLYGNLTAFENVKVHALLRGLPTQRIEEVLHTVDL  119
            + G + N     S+LKDIGSLIE+P+ YG+LT++EN+ +   L +LP + ++E L  V L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  120  THTGKKKASQFSMGMKQRLGIAIALLNQPKLLILDEPTNGLDPLGIQELRELITSFPQK-  178
             +  +KK SQ+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI S+P+K 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  179  GMTVILSSHILSEVQLMADHIGIISEGRLGYQDSIKG  215
            GMTV++SSH+LSE++ +A  IGII++G L +QDSIK 
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

143) Clopa_1714 in NC_021182


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  188 bits (699),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 117/243 (49%), Positives = 182/243 (75%), Gaps = 1/243 (0%)

Query  1    MNNIIRTINLTKKIKEVTIVNKININLEQGDIYGFLGPNGSGKSTTIKMMLGLVKPTEGR  60
            M+ IIRT  L+K  + +  V+ I++ + QG +YGFLGPNG+GKSTT+KM+LGL KPT+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VEINGYDVW-KDKKKALNSIGAMIENPSFYDYLSGYKNLELYKNLYDLPKTRINEVLNIV  119
            ++I G ++  K++   L+ IG++IE+PS+Y+ L+G  N+ + + L DLPK  +NE L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  GLekeknkkvkkYSLGMKQRLAIARAFINYPKIVILDEPTNGLDPVGVVEIRNLIRDLSV  179
             LE++KNKKV +YSLGMKQRL+IA A++++PK++ILDEPTNGLDP G+ EIR+LI+ L+ 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  KENINFIICSHILSEIQELCNKVSIINKGELISEGYVKDLLNQEFDEYFIDTSDLQKAKV  239
            K  +  +I SH+LSEI+++   ++IIN GEL+ ++ +K+L N+   +  I T ++  A+ 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  240  ILE  242
            +L+
Sbjct  241  LLN  243

144) HMPREF0659_A5631 in NC_014370


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  188 bits (697),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 122/300 (41%), Positives = 204/300 (68%), Gaps = 11/300 (3%)

Query  3    ILETNHLTFNYRNHSVLEDINLKIPEGSIYGYLGKNGEGKSTTIKILLGLEQTKINTVFF  62
            I+ T++L+ +Y +   + DI+L++P+G++YG+LG NG GKSTT+K+LLGL +     + +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   NKKEFHS-NRLHILQNIGCLIEHPFFYADLSAYENLNYLDILYHCGQKRIQEVLELVNLT  121
              KE++  NR+ IL++IG LIE P +Y++L++ EN+  ++ L +  +K ++E L +V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  122  KDKDKKVRKYSTGMKQRLGIAMAMFHNPKLLILDEPLNGLDPQGVFEMRELMLKLKSK-G  180
            ++K+KKV +YS GMKQRLGIAMA+   PKLLILDEP NGLDP G+ E+REL+  L  K G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  181  KTIFISGHILAEMEKICTHIGILNNKRLLFQGEINSLLNQKKQSYLIHTDQPERCMKICK  240
             T++IS+H+L+E+++I T IGI+N+  L+FQ+ I+ L N+ +    I T +      +  
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNV-----VSA  238

Query  241  EHLIPTKR----ISDGTLIIEIEQDGSFDSFKKLMQQNHIQILFADTYQENLESVFLHLI  296
            + L+ TK     I DG L IE  +D+    ++ ++ +++I+++  +  + +LE +FL+L+
Sbjct  239  QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

145) GK0312 in NC_006510


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  187 bits (692),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 117/219 (54%), Positives = 169/219 (78%), Gaps = 5/219 (2%)

Query  5    MLETHHVSKAFGKQLVVDDVSIKVKKQTVYGLLGPNGAGKSTLLKMLTGLLRPTKGEIMI  64
            ++ T+++SK + K + V D+ ++V + +VYG+LGPNGAGKST LKML GL +PT+G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   NGHPWSRKD----LKDIGVLIESPALYGNLTAHENLLVHAKLLHLPESRIQEVLNIVGLE  120
             G   + K+    LKDIG LIESP+ YG+LT+ EN+ +  +LL+LP   ++E L+IV LE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKKASQFSLGMKQRLGIAKALLNHPKLLILDEPTNGLDPLGIQDLRKLIQSFTEN-G  179
            N  +KK SQ+SLGMKQRLGIA A+++ PKLLILDEPTNGLDP GI+++R LI+S+ E+ G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILSEVKQLADYIGIIQNGKLRYEGKIDESQD  218
            +TV++SSH+LSE+ Q+A  IGII++G L +++ I E ++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

146) GTCCBUS3UF5_3960 in NC_016593


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  187 bits (692),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 117/219 (54%), Positives = 169/219 (78%), Gaps = 5/219 (2%)

Query  5    MLETHHVSKAFGKQLVVDDVSIKVKKQTVYGLLGPNGAGKSTLLKMLTGLLRPTKGEIMI  64
            ++ T+++SK + K + V D+ ++V + +VYG+LGPNGAGKST LKML GL +PT+G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   NGHPWSRKD----LKDIGVLIESPALYGNLTAHENLLVHAKLLHLPESRIQEVLNIVGLE  120
             G   + K+    LKDIG LIESP+ YG+LT+ EN+ +  +LL+LP   ++E L+IV LE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKKASQFSLGMKQRLGIAKALLNHPKLLILDEPTNGLDPLGIQDLRKLIQSFTEN-G  179
            N  +KK SQ+SLGMKQRLGIA A+++ PKLLILDEPTNGLDP GI+++R LI+S+ E+ G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILSEVKQLADYIGIIQNGKLRYEGKIDESQD  218
            +TV++SSH+LSE+ Q+A  IGII++G L +++ I E ++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

147) SSU98_0898 in NC_009443


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  187 bits (695),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 116/241 (49%), Positives = 179/241 (75%), Gaps = 8/241 (3%)

Query  1    MLLEINHLKKVY-KNFPTVDLEKITVRKGKIYGFLGPNGAGKTTTIKMILSLVTPTSGEF  59
            M++  ++L K Y K F   D++ + V +G +YGFLGPNGAGK+TT+KM+L+L  PT G++
Sbjct  3    MIIRTQRLSKEYNKIFRVKDID-LRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  60   FINKKDFRNDKKY--LNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDKNNIRPTLELVG  117
             I  K++ + ++   L++IGS+IE PSYY +LTG EN+ + Q+++++ K+N+  +L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  118  LADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVQLA  177
            L ++KN+K  V  YSLGMKQRL++A A++K PK+L+LDEPTNGLDPAGI+EIRELI  L+
Sbjct  122  LENQKNKK--VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  178  KEKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGGDFSQKNIVQ  237
               G+TV+ISSH+L+EI++IA  +GIINHG LV+++ I  + +    +I+  +  KN+V 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA--IKTKNVVS  237

Query  238  T  238
            +
Sbjct  238  A  238

148) Thexy_0985 in NC_015555


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  187 bits (692),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 117/225 (52%), Positives = 170/225 (76%), Gaps = 5/225 (2%)

Query  1    MEYILETRNLKKSYGKHLVVDDISLKVPKGSIYGLLGPNGAGKSTTLKMLTGLLHPTSGE  60
            ME I+ T+ L K Y K + V DI L+VP+G++YG+LGPNGAGKSTTLKML GL  PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IFVFG----ERWRREHLDKIGALIESPALYGNLTAYENLLVHARLIGIADERIKEVLEIV  116
            I ++G    E+ R   L  IG+LIESP+ YG+LT+ EN+ +  RL++++   ++E L IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLNDAGKKLVSQFSTGMKQRLGIAIALLGNPDLLILDEPSNGLDPIGIQNLRELIKSF-Q  175
             L++  +K VSQ+S GMKQRLGIA+A++  P LLILDEP+NGLDP GI+++RELIKS+ +
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  176  KMGITVILSSHILTEVSKLVDTIGIISNGKLKYQGTIDEKQDIEQ  220
            K G+TV++SSH+L+E+ ++  +IGII++G L +Q++I E ++  Q
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQ  225

149) CA_C2040 in NC_003030


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  187 bits (694),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 130/303 (43%), Positives = 209/303 (69%), Gaps = 14/303 (4%)

Query  1    MKYLVRTFNLTKKYKNTSVVENLNLNIEQGQIYGFLGKNGAGKTTTLRMILGLMKISTGE  60
            M  ++RT  L+K Y++   V +++L + QG +YGFLG NGAGK+TTL+M+LGL K + G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VELFG----EKNPTRSIYKKIGSIIEYPGFYPNLTAEENLDIHRRMMKIENQKRINETLT  116
            ++++G    EKN   SI K IGS+IE P++Y +LT+ EN+ I +R++ + + K +NE+L 
Sbjct  61   INILGKELNEKNRI-SILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALK  118

Query  117  MVGLDSNSIKGKKVKNFSLGMKQRLGLARALLHEPELLILDEPTNGLDPLGIKSMRETLI  176
            +V L+++  K KKV ++SLGMKQRLG+A A++  P LLILDEPTNGLDP GI  +RE + 
Sbjct  119  IVRLENQ--KNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  177  ALCKDRGITILVSSHLLSEIEQLATKIGIIDKGHLIEELTYDDLQKRNKKYLKLKVSDVK  236
            +L    G+T+L+SSHLLSEI+Q+AT IGII+ G+L+ + +  +L++R +  + +K  +V 
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVV  236

Query  237  EACSLIKNNLNIKDYEIIGKDAIKVYEKINES--STIAKTLIKNDIELYEMSFSKDNLED  294
             A  L    LN K+Y  + +D+    E++++S  + I   L+ ++I+++ +   K +LED
Sbjct  237  SAQKL----LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLED  292

Query  295  YFV  297
             F+
Sbjct  293  IFL  295

150) SMB_G2072 in NC_015687


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  187 bits (694),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 130/303 (43%), Positives = 209/303 (69%), Gaps = 14/303 (4%)

Query  1    MKYLVRTFNLTKKYKNTSVVENLNLNIEQGQIYGFLGKNGAGKTTTLRMILGLMKISTGE  60
            M  ++RT  L+K Y++   V +++L + QG +YGFLG NGAGK+TTL+M+LGL K + G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VELFG----EKNPTRSIYKKIGSIIEYPGFYPNLTAEENLDIHRRMMKIENQKRINETLT  116
            ++++G    EKN   SI K IGS+IE P++Y +LT+ EN+ I +R++ + + K +NE+L 
Sbjct  61   INILGKELNEKNRI-SILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALK  118

Query  117  MVGLDSNSIKGKKVKNFSLGMKQRLGLARALLHEPELLILDEPTNGLDPLGIKSMRETLI  176
            +V L+++  K KKV ++SLGMKQRLG+A A++  P LLILDEPTNGLDP GI  +RE + 
Sbjct  119  IVRLENQ--KNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  177  ALCKDRGITILVSSHLLSEIEQLATKIGIIDKGHLIEELTYDDLQKRNKKYLKLKVSDVK  236
            +L    G+T+L+SSHLLSEI+Q+AT IGII+ G+L+ + +  +L++R +  + +K  +V 
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVV  236

Query  237  EACSLIKNNLNIKDYEIIGKDAIKVYEKINES--STIAKTLIKNDIELYEMSFSKDNLED  294
             A  L    LN K+Y  + +D+    E++++S  + I   L+ ++I+++ +   K +LED
Sbjct  237  SAQKL----LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLED  292

Query  295  YFV  297
             F+
Sbjct  293  IFL  295

151) CEA_G2054 in NC_017295


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  187 bits (694),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 130/303 (43%), Positives = 209/303 (69%), Gaps = 14/303 (4%)

Query  1    MKYLVRTFNLTKKYKNTSVVENLNLNIEQGQIYGFLGKNGAGKTTTLRMILGLMKISTGE  60
            M  ++RT  L+K Y++   V +++L + QG +YGFLG NGAGK+TTL+M+LGL K + G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VELFG----EKNPTRSIYKKIGSIIEYPGFYPNLTAEENLDIHRRMMKIENQKRINETLT  116
            ++++G    EKN   SI K IGS+IE P++Y +LT+ EN+ I +R++ + + K +NE+L 
Sbjct  61   INILGKELNEKNRI-SILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALK  118

Query  117  MVGLDSNSIKGKKVKNFSLGMKQRLGLARALLHEPELLILDEPTNGLDPLGIKSMRETLI  176
            +V L+++  K KKV ++SLGMKQRLG+A A++  P LLILDEPTNGLDP GI  +RE + 
Sbjct  119  IVRLENQ--KNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  177  ALCKDRGITILVSSHLLSEIEQLATKIGIIDKGHLIEELTYDDLQKRNKKYLKLKVSDVK  236
            +L    G+T+L+SSHLLSEI+Q+AT IGII+ G+L+ + +  +L++R +  + +K  +V 
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVV  236

Query  237  EACSLIKNNLNIKDYEIIGKDAIKVYEKINES--STIAKTLIKNDIELYEMSFSKDNLED  294
             A  L    LN K+Y  + +D+    E++++S  + I   L+ ++I+++ +   K +LED
Sbjct  237  SAQKL----LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLED  292

Query  295  YFV  297
             F+
Sbjct  293  IFL  295

152) BcerKBAB4_0264 in NC_010184


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  187 bits (692),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 123/285 (44%), Positives = 203/285 (72%), Gaps = 10/285 (3%)

Query  23   VDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLSLIKPTSGNIEIFGEDLL-RNPKDILRR  81
            V ++++ V QG +YGF+G NGAGK+TT++MLL+L KPT GNI+I+G +L  +N   IL+ 
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  82   IGSIVEVPGFYENLTARENLLINAKIIGVHKRNAIEEALEIVGLQHETKKLVGKYSLGMK  141
            IGS++E P++Y +LT+ EN+ I  +++++ K+N ++EAL IV L+++ +K V++YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMK  138

Query  142  QRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIKSLAQERNITILISSHILAEVEQ  201
            QRLGIA A++ +P LLILDEPTNGLDP GI E+R LIKSL++   +T+LISSH+L+E++Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  202  LVDRMGIIHEGRLLEEVSLDTLRKANRKYIEFQVNNDNKATMLLENHFQIFDY-EVHDEG  260
            +   +GII++G L+ + S+  L++  +  I ++ +N   A  LL+      +Y  + ++G
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK----GYMSLIQDG  254

Query  261  NIRVYSHF--GQQGHINRTLVRNDIEVLKIVMSEDRLEDYFTKLV  303
             + +  ++  ++ + IN  LV+++I+V++I      LED F  L+
Sbjct  255  YLTI-ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

153) PPE_04708 in NC_014483


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  186 bits (689),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 124/303 (41%), Positives = 206/303 (68%), Gaps = 8/303 (2%)

Query  1    MDYIIETKKLRKQFGGAVAVDDISLHVERGSIYGFLGENGAGKTTTIRMLMRLIEPTSGE  60
            M+ II T++L K++     V DI L+V +G++YGFLG NGAGK+TT++ML+ L  PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VFLFGERL-EKNYPSIFSKIGTIIETPGLYENLSARDNLRICCMYMGVQDNGRIERTLTT  119
            + ++G  L EKN  SI+  IG++IE+P+ Y +L++ +N+ I    +++  +  ++ +L  
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGLEHTGKKKFKDFSLGMKQRLGIARALVHDPELLILDEPTNGLDPSGIKEIRQLLKRLC  179
            V LE+  +KK  ++SLGMKQRLGIA A++  P LLILDEPTNGLDP+GI EIR+L+K L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  EEDGKTILISSHILSEIQQLATHIGIIHNGKLLAEDHLSRLEENFEQYTDVKIDDAEAVQ  239
            E  G T+LISSH+LSEI+Q+AT IGII++G L+ +D +  L++  +    +K  +  + Q
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  AFLQEH--MKQLNSDLISPQQLRIHSSIENTAVLNKQLLDHQFSVYEIHTTKQTLEEYFL  297
             +L+    M  ++ + ++ ++L+ +S + +   +   L++ ++ V+ I+  K++LE+ FL
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLK-DSDVAKINGM---LVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  TLI  300
             L+
Sbjct  296  ELL  298

154) Tthe_1886 in NC_014410


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  186 bits (689),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 116/225 (52%), Positives = 169/225 (76%), Gaps = 5/225 (2%)

Query  1    MEYILETRNLKKSYGKHLVVDDISLKVPKGSIYGLLGPNGAGKSTTLKMVTGLLHPTSGE  60
            ME I+ T+ L K Y K + V DI L+VP+G++YG+LGPNGAGKSTTLKM+ GL  PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IFVFG----ERWRREHLDKIGALIESPALYGNLTAYENLLVHARLIGIADERIKEVLEIV  116
            I ++G    E+ R   L  IG+LIESP+ YG+LT+ EN+ +  RL++++   ++E L IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  DLNDTGKKLVSQFSTGMKQRLGIAIALLGNPDLLILDEPSNGLDPIGIQNLRELIKSFHE  176
             L++  +K VSQ+S GMKQRLGIA+A++  P LLILDEP+NGLDP GI+++RELIKS+ E
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  M-GITVILSSHILTEVSKLVDTIGIISNGKLKYQGTIDEKQDIEQ  220
              G+TV++SSH+L+E+ ++  +IGII++G L +Q++I E ++  Q
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQ  225

155) EUBELI_01662 in NC_012778


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  186 bits (688),  Expect = 9e-49, Method: Compositional matrix adjust.
 Identities = 115/219 (53%), Positives = 168/219 (77%), Gaps = 5/219 (2%)

Query  1    MEMMLQTQNLCKYFRKQKAVNNVSLNIEKGQIYGLLGPNGAGKSTTLKMLTGMMKPTAGK  60
            MEM+++TQ L K + K   V+++ L + +G +YG+LGPNGAGKSTTLKML G+ KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IYFDGKLLDRKD----LSKIGALIENPPIYENLSARENLKVRQLLLGTDENRIDEVLQIV  116
            I + GK L+ K+    L  IG+LIE+P+ Y +L++ EN+ + Q LL+   + ++E L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  SLTNTGKKKAGQFSLGMKQRLGIAMALLGAPELLILDEPTNGLDPIGIEELRELIRSFPE  176
             L N  +KK +Q+SLGMKQRLGIAMA++  P LLILDEPTNGLDP GIEE+RELI+S+PE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GITVILSSHILSEVQLLADKVGIISCGILGYEGALKQ  214
            + G+TV++SSH+LSE++ +A  +GII+ G L +++++K+
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

156) spaF in NC_009328


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  186 bits (688),  Expect = 9e-49, Method: Compositional matrix adjust.
 Identities = 116/219 (53%), Positives = 169/219 (78%), Gaps = 5/219 (2%)

Query  5    MLETHHVSKAFGKQLVVDDVSIKVKKQTVYGLLGPNGAGKSTLLKMLTGLLRPTKGEIMI  64
            ++ T+++SK + K + V D+ ++V + +VYG+LGPNGAGKST LKML GL +PT+G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   NGHPWSRKD----LKDIGVLIESPALYGNLTAHENLLVHAKLLHLPESRIQEVLNIVGLE  120
             G   + K+    LKDIG LIESP+ YG+LT+ EN+ +  +LL+LP   ++E L+IV LE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKKASQFSLGMKQRLGIAKALLNHPKLIILDEPTNGLDPLGIQDLRKLIQSFTEN-G  179
            N  +KK SQ+SLGMKQRLGIA A+++ PKL+ILDEPTNGLDP GI+++R LI+S+ E+ G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILSEVKQLADYIGIIQNGKLRYEGKIDESQD  218
            +TV++SSH+LSE+ Q+A  IGII++G L +++ I E ++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

157) BaLi_c03310 in NC_021362


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  185 bits (686),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 114/216 (53%), Positives = 166/216 (77%), Gaps = 5/216 (2%)

Query  4    ILLETRHLQKKFGRSQAVSDVSLSVKKNSIYGLLGPNGAGKSTTLKLLTGILNPTAGDIL  63
            +++ T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ +PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  64   VEGR----KWKRSVLKDIGSLIESPPLYDNLTAYENAKVHATLLGLPDARITEVLKTVDM  119
            + G+    K + S+LKDIGSLIESP+ Y++LT+ EN  +   LL+LP   + E LK V +
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  120  HHAGKKKAGQFSMGMRQRLGIAIALLNRPKLLILDEPTNGLDPIGIQELRELIRSFP-KQ  178
            ++  +KK +Q+S+GM+QRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P K 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  179  GMTVILSSHILSEVEQIADHIGIISGGYLGYQGKIN  214
            GMTV++SSH+LSE++QIA  IGII+ G L +Q+ I+
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

158) spaF in NC_006270


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  185 bits (686),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 113/216 (53%), Positives = 167/216 (78%), Gaps = 5/216 (2%)

Query  4    ILLETRHLQKKFGRSQAVSDVSLSVEKNSIYGLLGPNGAGKSTTLKLLTGILNPTAGDIL  63
            +++ T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ +PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  64   FEGRQW----KRSVLKDIGSLIESPPLYDNLTAYENAKVHAALLGLPDARITEVLKTVDM  119
            + G++     + S+LKDIGSLIESP+ Y++LT+ EN  +   LL+LP   + E LK V +
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  120  HHTGKKKAGQFSMGMRQRLGIAIALLNRPKLLILDEPTNGLDPIGIQELRELIRSFPEQ-  178
            ++  +KK +Q+S+GM+QRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+PE+ 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  179  GMTVILSSHILSEVEQIADHIGIISGGYLGYQGKIN  214
            GMTV++SSH+LSE++QIA  IGII+ G L +Q+ I+
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

159) spaF in NC_006322


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  185 bits (686),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 113/216 (53%), Positives = 167/216 (78%), Gaps = 5/216 (2%)

Query  5    ILLETRHLQKKFGRSQAVSDVSLSVEKNSIYGLLGPNGAGKSTTLKLLTGILNPTAGDIL  64
            +++ T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ +PT G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  65   FEGRQW----KRSVLKDIGSLIESPPLYDNLTAYENAKVHAALLGLPDARITEVLKTVDM  120
            + G++     + S+LKDIGSLIESP+ Y++LT+ EN  +   LL+LP   + E LK V +
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  121  HHTGKKKAGQFSMGMRQRLGIAIALLNRPKLLILDEPTNGLDPIGIQELRELIRSFPEQ-  179
            ++  +KK +Q+S+GM+QRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+PE+ 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  180  GMTVILSSHILSEVEQIADHIGIISGGYLGYQGKIN  215
            GMTV++SSH+LSE++QIA  IGII+ G L +Q+ I+
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

160) CK5_35820 in NC_021022


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  185 bits (687),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 109/216 (51%), Positives = 166/216 (77%), Gaps = 5/216 (2%)

Query  1    METLLRTENLTKKFKNQVAIQNISMNVPENSVYGLLGPNGAGKSTTLKMIAGILKPTRGS  60
            ME ++RT+ L+K +++   +++I + VP+ +VYG+LGPNGAGKSTTLKM+ G+ KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   I-IFNKHPWKRSD---LSNIGALIETPPLYGNLTARENLKVRTELLNISDGRIDEVLEIS  116
            I I+ K+   ++    L +IG+LIE+P+ YG+LT+ EN+ +   LL+++   ++E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGIAIALLNNPKLLILDEPTNGLDPVGIEELRNLIRQFP-  175
             L    +K+ +Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GIEE+R+LI+ +P 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  176  KQGMTVILSSHILSEVEQIADYIGIICNGKLEYEAP  211
            K GMTV++SSH+LSE++QIA  IGII +G L ++ +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDS  216

161) bcrA in NC_006274


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  185 bits (686),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 109/227 (49%), Positives = 171/227 (76%), Gaps = 2/227 (0%)

Query  23   VDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLGLIKPTSGTIEIFGEDLFQNQK-DILSR  81
            V ++++ V QG +YGF+G NGAGK+TT++MLLGL KPT G I+I+G +L ++++  IL  
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  82   IGSIVEVPGFYENLTAKENLLINAKIIGVHKKNAIEEALEIVGLQHETKKLVGKYSLGMK  141
            IGS++E P++Y +LT+ EN+ I  +++++ KKN ++EAL IV L+++ +K V++YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMK  138

Query  142  QRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHILAEVEQ  201
            QRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+L+E++Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  202  LVDRIGIIHEGKLLEEISLDTLRKANRKYIEFQVNNDSKATMLLENQ  248
            +   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK  245

162) ELI_2593 in NC_014624


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  184 bits (684),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 110/214 (52%), Positives = 162/214 (76%), Gaps = 5/214 (2%)

Query  5    LLETRALSKSFKKTEAVKKLNLRVRKNTIYGLLGPNGAGKSTTLKMMTGMLRPTAGEIIF  64
            ++ T+ LSK ++K   VK ++LRV + ++YG+LGPNGAGKSTTLKM+ G+ +PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   NGHSWSRKD----LENMGVLIEWPPLYDNLTAEENLKVRTTLLGLPEKRIGQVLKLVDLK  120
             G   + K+    L ++G LIE P+ Y++LT+ EN+ +   LL+LP K + + LK+V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGSKRAGQFSMGMKQRLGIALALLGNPKLLILDEPTNGLDPIGIQELRELIRSFP-KHG  179
            N  +K+ +Q+S+GMKQRLGIA+A++  PKLLILDEPTNGLDP GI+E+RELI+S+P K G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILSEVELMADDIGIISDGVLGYQSKI  213
            +TV++SSH+LSE++ +A  IGII++G L +Q  I
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

163) EUBREC_0087 in NC_012781


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  184 bits (681),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 115/219 (53%), Positives = 168/219 (77%), Gaps = 5/219 (2%)

Query  1    MEMMLQTQNLCKYFRKQKAVNNVSLNIEKGQIYGLLGPNGAGKSTTLKMLTGMMKPTAGK  60
            MEM+++TQ L K + K   V+++ L + +G +YG+LGPNGAGKSTTLKML G+ KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IYFDGKLLDRKD----LSKIGALIENPPIYENLSARENLKVRQLLLGTDENRIDEVLQIV  116
            I + GK L+ K+    L  IG+LIE+P+ Y +L++ EN+ + Q LL+   + ++E L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  SLTNTGKKKAGQFSLGMKQRLGIAMALLGEPELLILDEPTNGLDPIGIEELRELIRSFPE  176
             L N  +KK +Q+SLGMKQRLGIAMA++  P LLILDEPTNGLDP GIEE+RELI+S+PE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GITVILSSHILSEVQLLADKVGIISGGILGYEGALKQ  214
            + G+TV++SSH+LSE++ +A  +GII+ G L +++++K+
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

164) ERE_02670 in NC_021044


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  184 bits (681),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 115/219 (53%), Positives = 168/219 (77%), Gaps = 5/219 (2%)

Query  1    MEMMLQTQNLCKYFRKQKAVNNVSLNIEKGQIYGLLGPNGAGKSTTLKMLTGMMKPTAGK  60
            MEM+++TQ L K + K   V+++ L + +G +YG+LGPNGAGKSTTLKML G+ KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IYFDGKLLDRKD----LSKIGALIENPPIYENLSARENLKVRQLLLGTDENRIDEVLQIV  116
            I + GK L+ K+    L  IG+LIE+P+ Y +L++ EN+ + Q LL+   + ++E L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  SLTNTGKKKAGQFSLGMKQRLGIAMALLGEPELLILDEPTNGLDPIGIEELRELIRSFPE  176
             L N  +KK +Q+SLGMKQRLGIAMA++  P LLILDEPTNGLDP GIEE+RELI+S+PE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GITVILSSHILSEVQLLADKVGIISGGILGYEGALKQ  214
            + G+TV++SSH+LSE++ +A  +GII+ G L +++++K+
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

165) Theco_0444 in NC_019897


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  184 bits (681),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 109/217 (51%), Positives = 161/217 (75%), Gaps = 5/217 (2%)

Query  1    MTHVLQTDRVSKRFGRATVVDEVSLAVREGTVYGLLGPNGAGKTTVLKMIAGLLRPTGGR  60
            M  +++T+R+SK + +   V ++ L V +G+VYG+LGPNGAGK+T LKM+ GL +PT G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILFGGEPWSRKS----LAQIGALIEAPALYGNLTARENLKVHTLMLGLPDSRIDEALETV  116
            I + G   + K+    L +IG+LIE+P+ YG+LT+ EN+ +   +L+LP   ++EAL  V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLAGVGRKRASQFSLGMKQRLGIAIALLKRPRLLILDEPTNGLDPVGIQDLRELIRSFPA  176
             L     K+ SQ+SLGMKQRLGIA+A++K P+LLILDEPTNGLDP GI+++RELI+S+P 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GITVLLSSHALNEVEQIVDDIGIISGGKLRYQGPL  212
            + G+TVL+SSH L+E++QI   IGII+ G L +Q+++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

166) K710_0263 in NC_021314


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  184 bits (681),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 103/216 (48%), Positives = 168/216 (78%), Gaps = 5/216 (2%)

Query  1    MTNIMKTKNLTKLYRKQAVLTNVSINVEEGTVYGLLGPNGAGKSTLLKLITKVIQPNSGE  60
            M  I++T+ L+K Y K   + ++ + V +G+VYG+LGPNGAGKST LK++  + +P  G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILFDGNTLSDKE----LRKMGAIIENPAIYPNLTATENLEVLTTLLGIDKSKIDEVLRIV  116
            I + G+ L++K+    L+ +G++IE+P+ Y +LT+ EN+ ++  LL++ K +++E L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  SLQDTGNKKVKEFSLGMKQRLGIAMALINNPKLLILDEPTNGLDPIGIQELRELIRKFAD  176
             L++  NKKV ++SLGMKQRLGIAMA+++ PKLLILDEPTNGLDP GI+E+RELI+ +++
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  R-GITIILSSHILSEVQQVADKVGIINKGRLCYEGP  211
            + G+T+++SSH+LSE++Q+A  +GIIN G L ++++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDS  216

167) bcrA2 in NC_020134


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  184 bits (681),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 130/298 (44%), Positives = 202/298 (68%), Gaps = 8/298 (2%)

Query  3    DFIIETKGLTKKYGEQYAVKNVNMHVKKNTIYGLLGRNGAGKTTVMKMLLGIVKPTSGEI  62
            + II T+ L+K Y   + VK+++++V + ++YG+LG NGAGK+T +KMLLG+ KPT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   RIFGKDIKNNER-EILPRIGNLIERPGFYPNLTGTENLKIFAELRGIPQKDAVEKALDLV  121
             I+GK++++++R  IL  IG+LIE P++Y +LTG EN+ I   L ++P+K+ V+ AL +V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIV  120

Query  122  SLPYKEKKLFGEYSLGMKQRLGIALAIMHDPELLILDEPINGLDPIGIAEMRKLLRDLCD  181
             L  + +K  ++YSLGMKQRLGIA+AIM  P LLILDEP NGLDP GI E+R L++ L +
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  182  KKGKTiiisshilseiemisDDIGIIDNGVLIEEASISDLKNKNRKSIGFCVSDTNRAAA  241
            K G T++ISSH+LSEI+ I+  IGII++G L+ + SI +L N+ +  I++   +   A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  242  LLEDEFGIRNYGVSSEDKIFVYDF--SCDVSTLIKAFVKNDIDVYDAHVYENSLEDYF  297
            LL+     + Y    +D  +  +     DV+ +   +V ++IDV+  +   +SLED F
Sbjct  241  LLNT----KGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

168) Clst_0873 in NC_020887


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  184 bits (681),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 130/298 (44%), Positives = 202/298 (68%), Gaps = 8/298 (2%)

Query  6    DFIIETKGLTKKYGEQYAVKNVNMHVKKNTIYGLLGRNGAGKTTVMKMLLGIVKPTSGEI  65
            + II T+ L+K Y   + VK+++++V + ++YG+LG NGAGK+T +KMLLG+ KPT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  66   RIFGKDIKNNER-EILPRIGNLIERPGFYPNLTGTENLKIFAELRGIPQKDAVEKALDLV  124
             I+GK++++++R  IL  IG+LIE P++Y +LTG EN+ I   L ++P+K+ V+ AL +V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIV  120

Query  125  SLPYKEKKLFGEYSLGMKQRLGIALAIMHDPELLILDEPINGLDPIGIAEMRKLLRDLCD  184
             L  + +K  ++YSLGMKQRLGIA+AIM  P LLILDEP NGLDP GI E+R L++ L +
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  185  KKGKTiiisshilseiemisDDIGIIDNGVLIEEASISDLKNKNRKSIGFCVSDTNRAAA  244
            K G T++ISSH+LSEI+ I+  IGII++G L+ + SI +L N+ +  I++   +   A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  245  LLEDEFGIRNYGVSSEDKIFVYDF--SCDVSTLIKAFVKNDIDVYDAHVYENSLEDYF  300
            LL+     + Y    +D  +  +     DV+ +   +V ++IDV+  +   +SLED F
Sbjct  241  LLNT----KGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

169) Aaci_0643 in NC_013205


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  184 bits (681),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 113/280 (41%), Positives = 194/280 (70%), Gaps = 6/280 (2%)

Query  19   VRQLNMSVRTGEVYGFLGPNGAGKTTTIRMIVGLIRPTRGAIHVCGHDV-ERDPVSAKRY  77
            V+++++ V  G VYGFLGPNGAGK+TT++M++GL +PT+G I++ G ++ E++ +S  + 
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  78   LGAIVENPEMYGYLTGRQNLLHYARLSGVDRIEERIERVAKRVGLEDRIDDKVKRYSLGM  137
            +G+++E+P  YG LTG +N+    RL ++ +    ++   K V LE++ + KV +YSLGM
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPK--KNVNEALKIVRLENQKNKKVSQYSLGM  137

Query  138  RQRLGVAQALIADPKLLVLDEPTNGLDPAGIREFRELIRALAAE-GLAVFVSSHLLSEVE  196
            +QRLG+A A++  PKLL+LDEPTNGLDPAGI E+RELI++L+   G++V++SSHLLSE++
Sbjct  138  KQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEID  197

Query  197  QMCDRVAVLQQGSVIAEASVAELRA-GAGSLLLRVSRWDEATAWLRARGFEVEGKDGRLV  255
            Q+   ++++++G ++ + S+ EL+  G + + ++      A   L ++G+    +DG L 
Sbjct  198  QIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLT  257

Query  256  VGDLDDARVAKLLRDLVGAGFDVYE-AARTGGLEQSFLAL  294
            + +L D+ VAK+   LV + +DV+    +  +LE+ FL L
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

170) BBR47_36530 in NC_012491


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  184 bits (681),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 123/304 (41%), Positives = 205/304 (68%), Gaps = 10/304 (3%)

Query  1    MEHIVRTNRLTKAFQGQEVVSNVNMNMKKGEIYGFLGPNGAGKTTVMKMITNLVKPTSGE  60
            ME I+RT+RL+K ++    V ++++ + +G +YGFLGPNGAGK+T +KM+  L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IEIFGEKLMPNS-YHLLGRMGTIIEYPVFYDKLTARENLELHCEYMGYYNKKAIDEALEL  119
            I+I+G  L  ++   +L  +G++IE P +Y+ LT+ EN+ +    ++   KK ++EAL +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  120  VSLVDTGKKKVKTFSLGMKQRLGIARAITTKPELLIFDEPTNGLDPLGIKELRDVFRILC  179
            V L +  +KKV  +SLGMKQRLGIA AI   P LLI+DEPTNGLDP GI E+R++++ L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGTTLLISSHILGEIEQIADTIGVIQGGRLLREIAMDEIRGETTNYIEIMTTDCSRAA  239
              YG T+LISSH+L+EI+QIA +IG+I+ G L+ + ++ E++    + I I T +   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  YVLTDKLQLSNIRVIDNQFIRIYDQHVAQSEITKT---LIMNEVVIDSIHKRSGSLEDYF  296
             +L  K   + + +I++ ++ I  +++ +S+++K    L+ +++ +  I+ +  SLED F
Sbjct  240  KLLNTK---GYMSLIQDGYLTI--ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

Query  297  LQVL  300
            L++L
Sbjct  295  LELL  298

171) BMB171_C0253 in NC_014171


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (678),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 109/226 (49%), Positives = 170/226 (76%), Gaps = 2/226 (0%)

Query  23   VDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLSLIKPTSGTIEIFGENLFQNQK-DILSR  81
            V ++++ V QG +YGF+G NGAGK+TT++MLL+L KPT G I+I+G +L ++++  IL  
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  82   IGSIVEVPGFYENLTAKENLLINAKIIGVHKKNAIEEALEIVGLQHETKKLVGKYSLGMK  141
            IGS++E P++Y +LT+ EN+ I  +++++ KKN ++EAL IV L+++ +K V++YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMK  138

Query  142  QRLGIARALLHYPELLILDEPTNGLDPIGIKEIRKLIHSLAQERNITILISSHILAEVEQ  201
            QRLGIA A++ +P LLILDEPTNGLDP GI EIR LI SL++   +T+LISSH+L+E++Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  202  LVDRIGIIHEGKLLEEVSLDTLRKANRKYIEFQVNNDDKAVMLLEN  247
            +   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ 
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNT  244

172) nfa4200 in NC_006361


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (677),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 104/219 (48%), Positives = 152/219 (70%), Gaps = 4/219 (1%)

Query  5    IVVTSGLTKRYGEHTAVDDVGMRVAAGEVYGFLGPNGAGKTTTLRMLAGLIRPSAGTATV  64
            I+ T  L+K Y     V D+++RV+ G VYGFLGPNGAGK+TTL+ML GL +P+ G   +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   LGGAPGDP---AVLRRIGVLIEGPGFYPYLSGRENLRVLARYRGLGRAEVDEALDRVGLT  121
            LG    +    ++L+ IG LIE+P++Y  L+G EN+ ++ R  +L + +V+EAL  V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  122  ARGGDRFRTYSLGMKQRLGVGAALLGRPNLLILDEPTNGLDPAGMAEMRALIAGLAGE-G  180
             +   +   YSLGMKQRLG++ A++  P+LLILDEPTNGLDPAG+ E+R LI +L+   G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  181  HTVLLSSHLLSEVQEICDRVGVIANGRLVTESTVAELRG  219
             TVL+SSHLLSE+++I   +G+I +G LV + ++ EL+ 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

173) ycbN in NC_021362


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (677),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 125/303 (42%), Positives = 194/303 (65%), Gaps = 8/303 (2%)

Query  1    MTYIVQTSGLTKTFKGQEVVSNVSMHIRKGEIYGFLGPNGAGKTTVMKMLTSLVKPTSGE  60
            M  I++T  L+K ++    V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   INILGHKLTNQS-YEILGKIGSMIEYPIFYENLTANENLNLHCEYMGYHNKAKIQEVLDM  119
            INILG  L +++   IL  IGS+IE P +Y +LT+ EN+ +    ++  +K  ++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VNLKNIDSKPVKTFSLGMKQRLGIARAILTKPDLLILDEPINGLDPIGIKEIRNLFQVLS  179
            V L N  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI EIR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLISSHILNEVEQIADTIGVIRDGRLVEEVSMESVRGRNTEYIELVTPNQLRAC  239
              YGMT+LISSH+L+E++QIA +IG+I +G LV + S+  ++ R    I + T N + A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA-  238

Query  240  FVLEHELQIANFKILNDKTIRIYDA--EASQTAISKSLILNDIEIESMNKKHTSLEDYFL  297
               +  L+   +  L +      +   ++  + I+  L+ ++I++  ++    SLED FL
Sbjct  239  ---QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  SLI  300
             L+
Sbjct  296  ELL  298

174) Tsac_2267 in NC_017992


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (680),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 116/225 (52%), Positives = 167/225 (75%), Gaps = 5/225 (2%)

Query  1    MEYILETKNLKKSYGKHLVVDDISLKVPRGSIYGLLGPNGAGKSTTLKMLTGLLHPTSGE  60
            ME I+ T+ L K Y K + V DI L+VP+G++YG+LGPNGAGKSTTLKML GL  PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IFVFG----ERWRREHLDRIGALIESPALYGNLTAYENLLVHARLIGIADERIKEVLEIV  116
            I ++G    E+ R   L  IG+LIESP+ YG+LT+ EN+ +  RL++++   ++E L IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  DLNGTGKKLVSQFSTGMKQRLGIAIALLGNPDLLILDEPSNGLDPIGIQNLRELIKSFHE  176
             L+   +K VSQ+S GMKQRLGIA+A++  P LLILDEP+NGLDP GI+++RELIKS+ E
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  M-GITVILSSHILTEVSKLVDTICIISNGKLKYQGTIDEKQDVEQ  220
              G+TV++SSH+L+E+ ++  +I II++G L +Q++I E ++  Q
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQ  225

175) Thethe_01874 in NC_019970


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (680),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 114/225 (51%), Positives = 169/225 (76%), Gaps = 5/225 (2%)

Query  1    MEYILETRNLKKSYGKHLVVDDISLKVPRGSIYGLLGPNGAGKSTTLKMVTGLLHPTSGE  60
            ME I+ T+ L K Y K + V DI L+VP+G++YG+LGPNGAGKSTTLKM+ GL  PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IFVFG----ERWRREHLDRIGALIESPALYGNLTAHENLLVHARLIGIADERIKEVLEIV  116
            I ++G    E+ R   L  IG+LIESP+ YG+LT+ EN+ +  RL++++   ++E L IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  NLNDTGKKLVSQFSTGMKQRLGIAIALLGNPDLLILDEPSNGLDPIGIQNLRELIKSF-Q  175
             L++  +K VSQ+S GMKQRLGIA+A++  P LLILDEP+NGLDP GI+++RELIKS+ +
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  176  KMGITVILSSHILTEVSKLVDTIGIISNGKIKYQGTIDGKQDIEQ  220
            K G+TV++SSH+L+E+ ++  +IGII++G + +Q++I   ++  Q
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQ  225

176) RTO_31510 in NC_021015


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (678),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 114/219 (53%), Positives = 168/219 (77%), Gaps = 5/219 (2%)

Query  1    MEMMLQTQNLCKYFRKQKAVNNVSLNIEKGQIYGLLGPNGAGKSTTLKMLTGMMKPTAGK  60
            MEM+++TQ L K + K   V+++ L + +G +YG+LGPNGAGKSTTLKML G+ KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IYFDGKLLDRKD----LSKIGALIENPPIYENLSARENLKVRQLLLGTDENRIDEVLQIV  116
            I + GK L+ K+    L  IG+LIE+P+ Y +L++ EN+ + Q LL+   + ++E L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  SLTNTGKKKAGQFSLGMKQRLGIAMALLGEPELLILDEPTNGLDPIGIEELRELIRSFPE  176
             L N  +KK +Q+SLGMKQRLGIAMA++  P LLILDEPTNGLDP GIEE+RELI+S+PE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GITVILSSHILSEVQLLADKVGIISGGILGYEGALRQ  214
            + G+TV++SSH+LSE++ +A  +GII+ G L +++++++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

177) BAA_0335 in NC_012659


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (678),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 109/233 (47%), Positives = 173/233 (75%), Gaps = 2/233 (0%)

Query  17   YGKQKSVDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLGLIKPTSGTIEIFGEDLFQNQK  76
            Y K   V ++++ V QG +YGF+G NGAGK+TT++MLLGL KPT G I+I+G +L ++++
Sbjct  14   YNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNR  73

Query  77   -DILSRIGSIVEVPGFYENLTAKENLLINAKIIGVYKKNAIEDTLEIVGLQHETKKLVGK  135
              IL  IGS++E P++Y +LT+ EN+ I  +++++ KKN ++++L IV L+++ +K V++
Sbjct  74   ISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQ  132

Query  136  YSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHI  195
            YSLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+
Sbjct  133  YSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHL  192

Query  196  LAEVEQLVDRIGIIHEGRLLEEVSLDKLRKANRKYIEFQVNNENKAAMLLENQ  248
            L+E++Q+   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ +
Sbjct  193  LSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK  245

178) GBAA_0285 in NC_007530


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (678),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 109/233 (47%), Positives = 173/233 (75%), Gaps = 2/233 (0%)

Query  17   YGKQKSVDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLGLIKPTSGTIEIFGEDLFQNQK  76
            Y K   V ++++ V QG +YGF+G NGAGK+TT++MLLGL KPT G I+I+G +L ++++
Sbjct  14   YNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNR  73

Query  77   -DILSRIGSIVEVPGFYENLTAKENLLINAKIIGVYKKNAIEDTLEIVGLQHETKKLVGK  135
              IL  IGS++E P++Y +LT+ EN+ I  +++++ KKN ++++L IV L+++ +K V++
Sbjct  74   ISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQ  132

Query  136  YSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHI  195
            YSLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+
Sbjct  133  YSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHL  192

Query  196  LAEVEQLVDRIGIIHEGRLLEEVSLDKLRKANRKYIEFQVNNENKAAMLLENQ  248
            L+E++Q+   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ +
Sbjct  193  LSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK  245

179) BA_0285 in NC_003997


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (678),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 109/233 (47%), Positives = 173/233 (75%), Gaps = 2/233 (0%)

Query  17   YGKQKSVDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLGLIKPTSGTIEIFGEDLFQNQK  76
            Y K   V ++++ V QG +YGF+G NGAGK+TT++MLLGL KPT G I+I+G +L ++++
Sbjct  14   YNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNR  73

Query  77   -DILSRIGSIVEVPGFYENLTAKENLLINAKIIGVYKKNAIEDTLEIVGLQHETKKLVGK  135
              IL  IGS++E P++Y +LT+ EN+ I  +++++ KKN ++++L IV L+++ +K V++
Sbjct  74   ISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQ  132

Query  136  YSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHI  195
            YSLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+
Sbjct  133  YSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHL  192

Query  196  LAEVEQLVDRIGIIHEGRLLEEVSLDKLRKANRKYIEFQVNNENKAAMLLENQ  248
            L+E++Q+   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ +
Sbjct  193  LSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK  245

180) BAMEG_0338 in NC_012581


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (678),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 109/233 (47%), Positives = 173/233 (75%), Gaps = 2/233 (0%)

Query  17   YGKQKSVDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLGLIKPTSGTIEIFGEDLFQNQK  76
            Y K   V ++++ V QG +YGF+G NGAGK+TT++MLLGL KPT G I+I+G +L ++++
Sbjct  14   YNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNR  73

Query  77   -DILSRIGSIVEVPGFYENLTAKENLLINAKIIGVYKKNAIEDTLEIVGLQHETKKLVGK  135
              IL  IGS++E P++Y +LT+ EN+ I  +++++ KKN ++++L IV L+++ +K V++
Sbjct  74   ISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQ  132

Query  136  YSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHI  195
            YSLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+
Sbjct  133  YSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHL  192

Query  196  LAEVEQLVDRIGIIHEGRLLEEVSLDKLRKANRKYIEFQVNNENKAAMLLENQ  248
            L+E++Q+   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ +
Sbjct  193  LSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK  245

181) BAS0271 in NC_005945


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (678),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 109/233 (47%), Positives = 173/233 (75%), Gaps = 2/233 (0%)

Query  17   YGKQKSVDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLGLIKPTSGTIEIFGEDLFQNQK  76
            Y K   V ++++ V QG +YGF+G NGAGK+TT++MLLGL KPT G I+I+G +L ++++
Sbjct  14   YNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNR  73

Query  77   -DILSRIGSIVEVPGFYENLTAKENLLINAKIIGVYKKNAIEDTLEIVGLQHETKKLVGK  135
              IL  IGS++E P++Y +LT+ EN+ I  +++++ KKN ++++L IV L+++ +K V++
Sbjct  74   ISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQ  132

Query  136  YSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHI  195
            YSLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+
Sbjct  133  YSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHL  192

Query  196  LAEVEQLVDRIGIIHEGRLLEEVSLDKLRKANRKYIEFQVNNENKAAMLLENQ  248
            L+E++Q+   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ +
Sbjct  193  LSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK  245

182) BCAH820_0315 in NC_011773


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  183 bits (678),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 109/233 (47%), Positives = 173/233 (75%), Gaps = 2/233 (0%)

Query  17   YGKQKSVDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLGLIKPTSGTIEIFGEDLFQNQK  76
            Y K   V ++++ V QG +YGF+G NGAGK+TT++MLLGL KPT G I+I+G +L ++++
Sbjct  14   YNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNR  73

Query  77   -DILSRIGSIVEVPGFYENLTAKENLLINAKIIGVYKKNAIEDTLEIVGLQHETKKLVGK  135
              IL  IGS++E P++Y +LT+ EN+ I  +++++ KKN ++++L IV L+++ +K V++
Sbjct  74   ISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQ  132

Query  136  YSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHI  195
            YSLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+
Sbjct  133  YSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHL  192

Query  196  LAEVEQLVDRIGIIHEGRLLEEVSLDKLRKANRKYIEFQVNNENKAAMLLENQ  248
            L+E++Q+   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ +
Sbjct  193  LSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK  245

183) CK1_37030 in NC_021014


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 108/219 (50%), Positives = 165/219 (76%), Gaps = 5/219 (2%)

Query  21   MDMILKTTDLCKNFKGQMAVNNVSLNIRRNSVYGLLGPNGAGKSTILKMLTGILRPTSGS  80
            M+MI++T  L K+++    V+++ L + + +VYG+LGPNGAGKST LKML G+ +PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  81   IEFDGHPWKRND----LEHIAALIEMPPLYENLTAYENLKVRTTLLGLDDARINEVLQIV  136
            I++ G   + ++    L +I++LIE P+ Y +LT+ EN+ +   LL+L    +NE L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  137  QLTNTGKKRAGQFSLGMKQRLGIAIALLNSPQLLILDEPTNGLDPLGIEELRELIRSFPC  196
            +L N  +K+ +Q+SLGMKQRLGIA+A+++ P+LLILDEPTNGLDP GIEE+RELI+S+P 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  197  K-GITVILSSHILSEVQQIADHVGIIAGGVLGYEGELRA  234
            K G+TV++SSH+LSE++QIA  +GII  G L +++ ++ 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

184) Clocel_4204 in NC_014393


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 124/307 (41%), Positives = 213/307 (70%), Gaps = 18/307 (5%)

Query  3    EIILKTHKLSKKYGNQLAVNNVTMTVRKGDIYGFIGKNGAGKTTLIRIVTGLIHKTGGEI  62
            E+I++T++LSK Y + + V+++ + V +G +YGF+G NGAGK+T ++++ GL   T G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   ELLGVSNEKGLNEARTI-----VGSLVEMPAFYGNMTAKENLEVSRLVRNIAGKQCIEEV  117
            ++LG    K LNE   I     +GSL+E P++YG++T+ EN+ + + + +++ K+ ++E 
Sbjct  62   NILG----KELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEA  116

Query  118  LELVDLKGASNKKVKNFSLGMKQRLGIANALLGNPRFLILDEPINGLDPVSIVEIRELLK  177
            L +V L    NKKV ++SLGMKQRLGIA A++  P++LILDEP NGLDP +I EIREL+K
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  178  KINKEKDITILVSSHILSELSELATCYGIIDNGQLLEEISAEQLYEKCKQYIEIKVDDAK  237
             +    ++T+L+SSH+LSE+ ++AT  GII++G+L+ + S  +L ++ +  I IK     
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----  232

Query  238  KAVVLLEKELDIIDY-SVVENSIIKVYSHL--NDVAKINTLLIRNNIEISNIGLKGQNLE  294
            K VV  +K L+  +Y S+++++ + +  +L  +DVAKIN +L+++NI++  I    ++LE
Sbjct  233  KNVVSAQKLLNTKGYMSLIQDGYLTI-ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLE  291

Query  295  EYFLSVV  301
            + FL ++
Sbjct  292  DIFLELL  298

185) HD73_0316 in NC_020238


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (673),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 109/226 (49%), Positives = 170/226 (76%), Gaps = 2/226 (0%)

Query  23   VDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLSLIKPTSGTIEIFGENLFQNQK-DILSR  81
            V ++++ V QG +YGF+G NGAGK+TT++MLL+L KPT G I+I+G +L ++++  IL  
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  82   IGSIVEVPGFYENLTAKENLLINAKIIGVHKKNAIEEALEIVGLQHETKKLVGKYSLGMK  141
            IGS++E P++Y +LT+ EN+ I  +++++ KKN ++EAL IV L+++ +K V++YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMK  138

Query  142  QRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHILAEIEQ  201
            QRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+L+EI+Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  202  LVDRIGIIHEGKLLEEVSLDTLRKANRKYIEFQVNNDDKAVMLLEN  247
            +   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ 
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNT  244

186) BCB4264_A0314 in NC_011725


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (673),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 108/226 (48%), Positives = 170/226 (76%), Gaps = 2/226 (0%)

Query  23   VDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLSLIKPTSGTIEIFGENLFQNQK-DILSR  81
            V ++++ V QG +YGF+G NGAGK+TT++MLL+L KPT G I+I+G +L ++++  IL  
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  82   IGSIVEVPGFYENLTAKENLLINAKIIGVHKKNAIEEALEIVGLQHETKKLVGKYSLGMK  141
            IGS++E P++Y +LT+ EN+ I  +++++ KKN ++EAL IV L+++ +K V++YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMK  138

Query  142  QRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHILAEVEQ  201
            QRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+L+E++Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  202  LVDRIGIIHEGKLLEEVSLDTLRKANRKYIEFQVNNDDKAVMLLEN  247
            +   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ 
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNT  244

187) BCG9842_B5000 in NC_011772


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 108/226 (48%), Positives = 170/226 (76%), Gaps = 2/226 (0%)

Query  23   VDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLSLIKPTSGTIEIFGENLFQNQK-DILSR  81
            V ++++ V QG +YGF+G NGAGK+TT++MLL+L KPT G I+I+G +L ++++  IL  
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  82   IGSIVEVPGFYENLTAKENLLINAKIIGVHKKNAIEEALEIVGLQHETKKLVGKYSLGMK  141
            IGS++E P++Y +LT+ EN+ I  +++++ KKN ++EAL IV L+++ +K V++YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMK  138

Query  142  QRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHILAEVEQ  201
            QRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+L+E++Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  202  LVDRIGIIHEGKLLEEVSLDTLRKANRKYIEFQVNNDNKAVMLLEN  247
            +   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ 
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNT  244

188) BTF1_27475 in NC_018508


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 108/226 (48%), Positives = 170/226 (76%), Gaps = 2/226 (0%)

Query  23   VDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLSLIKPTSGTIEIFGENLFQNQK-DILSR  81
            V ++++ V QG +YGF+G NGAGK+TT++MLL+L KPT G I+I+G +L ++++  IL  
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  82   IGSIVEVPGFYENLTAKENLLINAKIIGVHKKNAIEEALEIVGLQHETKKLVGKYSLGMK  141
            IGS++E P++Y +LT+ EN+ I  +++++ KKN ++EAL IV L+++ +K V++YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMK  138

Query  142  QRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHILAEVEQ  201
            QRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+L+E++Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  202  LVDRIGIIHEGKLLEEVSLDTLRKANRKYIEFQVNNDNKAVMLLEN  247
            +   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ 
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNT  244

189) BCA_0347 in NC_012472


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 109/233 (47%), Positives = 173/233 (75%), Gaps = 2/233 (0%)

Query  17   YGKQKSVDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLSLIKPTSGTIEIFGEDLFQNQK  76
            Y K   V ++++ V QG +YGF+G NGAGK+TT++MLL+L KPT G I+I+G +L ++++
Sbjct  14   YNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNR  73

Query  77   -DILSRIGSIVEVPGFYENLTAKENLLINAKIIGVYKKNAIEDALEIVGLQHETKKLVGK  135
              IL  IGS++E P++Y +LT+ EN+ I  +++++ KKN +++AL IV L+++ +K V++
Sbjct  74   ISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQ  132

Query  136  YSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHI  195
            YSLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+
Sbjct  133  YSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHL  192

Query  196  LAEVEQLVDRIGIIHEGRLLEEVSLDKLRKANRKYIEFQVNNENKAAMLLENQ  248
            L+E++Q+   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ +
Sbjct  193  LSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK  245

190) bcrA in NC_008600


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 109/233 (47%), Positives = 173/233 (75%), Gaps = 2/233 (0%)

Query  17   YGKQKSVDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLSLIKPTSGTIEIFGEDLFQNQK  76
            Y K   V ++++ V QG +YGF+G NGAGK+TT++MLL+L KPT G I+I+G +L ++++
Sbjct  14   YNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNR  73

Query  77   -DILSRIGSIVEVPGFYENLTAKENLLINAKIIGVYKKNAIEDALEIVGLQHETKKLVGK  135
              IL  IGS++E P++Y +LT+ EN+ I  +++++ KKN +++AL IV L+++ +K V++
Sbjct  74   ISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQ  132

Query  136  YSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHI  195
            YSLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+
Sbjct  133  YSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHL  192

Query  196  LAEVEQLVDRIGIIHEGRLLEEVSLDKLRKANRKYIEFQVNNENKAAMLLENQ  248
            L+E++Q+   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ +
Sbjct  193  LSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK  245

191) Mmar10_1823 in NC_008347


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 101/240 (43%), Positives = 176/240 (74%), Gaps = 1/240 (0%)

Query  15   YGKLTALDAVDLAIPAGAIYGFLGPNGAGKTTAIRCAMGLLTPQSGRVLIDGHDLRQSRR  74
            Y K+  +  +DL +P GA+YGFLGPNGAGK+T+++  +GL  P  G + I G +L +  R
Sbjct  14   YNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNR  73

Query  75   -KALASVGAVIETPALFPNLTGRENLDITRRMLDAPPALIDRALELVDMRDAADRRVGQY  133
               L  +G++IE+P+ + +LTG EN+ I +R+LD P   ++ AL +V + +  +++V+QY
Sbjct  74   ISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKKVSQY  133

Query  134  SLGMKQRMGlarallaeprllilDEPTNGLDPAGIRDMRALIRALPERTGATIFMSSHLL  193
            SLGMKQR+G+A A++  P+LLILDEPTNGLDPAGI ++R LI++LPE+ G T+++SSHLL
Sbjct  134  SLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLL  193

Query  194  SEVEQLASHVGLLQQGRVVFDGTLAALSEQQAPRLLVTATPADTAHEVMTASGFAGVIRD  253
            SE++Q+A+ +G++++G +VF++++  L ++  +++ + +    +A+ ++ + G+ ++I+D
Sbjct  194  SEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQD  253

192) Bresu_1426 in NC_014375


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 120/299 (41%), Positives = 203/299 (68%), Gaps = 7/299 (2%)

Query  1    MGAAIETQGLTRRFGRHLAVDAVSMTVPEKAVYGFLGRNGAgktttlkmllglltPSAGY  60
            M   I TQ L++ + + + V  + + VP+ AVYGFLG NGAGK+TTLKMLLGL  P+ G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ARICGIDVG-RDRIGAARKVGSLLEAHGFYANLTGRENLDLTRGLMGLAATEIDRVLEVV  119
              I G ++  ++RI+  + +GSL+E+ ++Y++LTG EN+ + + L++L+  +++  L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  DLTGNARRRVADYSLGMRQRLGLARAMLGNPPVLVLDEPTNGLDPDGIADMRRFLKTLPE  179
             L  +  ++V++YSLGM+QRLG+A A++  P +L+LDEPTNGLDP GI ++R ++K+LPE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  RTGATVLLSSHLLGEIEQTATHIGIVHEGRLVLEGDLAALKAELAPEIGLRVDDAERAGL  239
            + G TVL+SSHLL+EI+Q AT IGI+++G LV+++ +  L     ++I+++  +   A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  240  VLRRHD-LTLTRDAAGLVARLRPGADHDAATAALNRDLVDAGVQVFAIGARSPSLEGIY  297
            +L   + ++L +D+   +  L+     D+  A +N  LV++ ++VF I  +  SLE+I+
Sbjct  241  LLNTKGYMSLIQDGYLTIENLK-----DSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

193) Cseg_0642 in NC_014100


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  182 bits (673),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 120/299 (41%), Positives = 204/299 (69%), Gaps = 7/299 (2%)

Query  1    MTAAIETEGLTRRFGARLAVDDLSMTVPERAVYGFLGRNGAGKTTTLKMVLGLLRPTAGR  60
            M   I T+ L++ +   + V D+ + VP+ AVYGFLG NGAGK+TTLKM+LGL +PT G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VRVRGLDvarqr-maaarqvgaLLEAHGFYGNLTGRENlaltatllglgaaEIERVLEVV  119
            + + G ++  +  ++  +++G+L+E+ ++YG+LTG EN+++   LL+L   +++  L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  EMRRDAHRKVAGYSLGMRQRLGLARAMLGAPPVLLLDEPTNGLDPDGIADMRRFLRSLPE  179
             +  + ++KV+ YSLGM+QRLG+A A++  P +L+LDEPTNGLDP GI ++R +++SLPE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  RTGATVLLSSHLLGEIEQTATHVGVVDDGRLVLEGELARLKADLAPELVLRTGDDTRAVS  239
            + G TVL+SSHLL+EI+Q AT +G++++G LV+++ +  L     +++ ++T +   A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  240  LLLAQGRSPVAAEAGLTV-ALKSGEDPDQAAAVITRLLVESGASVFAIGPREQSLEDIY  297
            LL ++G  ++  ++ LT+  LK ++      A I  +LV+S   VF I  + +SLEDI+
Sbjct  241  LLNTKGYMSLIQDGYLTIENLKDSD-----VAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

194) CKL_1287 in NC_009706


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (672),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 107/217 (50%), Positives = 168/217 (78%), Gaps = 5/217 (2%)

Query  3    DLILETKELCKNFKGQMAVNNVSLKVRRNSIYGLLGPNGAGKSTTLKMITGMLRASSGKI  62
            ++I+ T+ L K+++    V+++ L+V + ++YG+LGPNGAGKSTTLKM+ G+ +++ G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   LFEGHKWSRND----LKNMGALIEGASLYGNLTARENLKVRTIVLGLPDKRIDEVLEIVD  118
             + G   + ++    LK++G+LIE++S YG+LT+ EN+ +   +L+LP K ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LKNTGNKRAHQFSMGMKQRLGIAIALLNNPKLLILDEPTNGLDPFGIQELRELIRSFP-K  177
            L N  NK+  Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  178  EGISVILSSHILSEVEQVACQIGIISGGILGYQGDMK  214
             G++V++SSH+LSE++Q+A  IGII+ G L +Q+ +K
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

195) CKR_1183 in NC_011837


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (672),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 107/217 (50%), Positives = 168/217 (78%), Gaps = 5/217 (2%)

Query  3    DLILETKELCKNFKGQMAVNNVSLKVRRNSIYGLLGPNGAGKSTTLKMITGMLRASSGKI  62
            ++I+ T+ L K+++    V+++ L+V + ++YG+LGPNGAGKSTTLKM+ G+ +++ G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   LFEGHKWSRND----LKNMGALIEGASLYGNLTARENLKVRTIVLGLPDKRIDEVLEIVD  118
             + G   + ++    LK++G+LIE++S YG+LT+ EN+ +   +L+LP K ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LKNTGNKRAHQFSMGMKQRLGIAIALLNNPKLLILDEPTNGLDPFGIQELRELIRSFP-K  177
            L N  NK+  Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  178  EGISVILSSHILSEVEQVACQIGIISGGILGYQGDMK  214
             G++V++SSH+LSE++Q+A  IGII+ G L +Q+ +K
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

196) mutF in NC_004350


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (672),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 108/216 (50%), Positives = 165/216 (77%), Gaps = 5/216 (2%)

Query  5    MLETKNLTKQFGKQTAVNQLNLKVERHSIYGLLGPNGSGKSTTLKMITGMLRKTSGHILI  64
            ++ T+ L+K++ K   V++++L+V + ++YG+LGPNG+GKSTTLKM+ G+ + T G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   DGHDWSRKD----LENIGALIESPPLYENLTAHENLKVRTLMLGLPDSRIDEVLKIVDLT  120
             G + + K+    L +IG+LIESP+ Y +LT+ EN+ +   +L+LP   ++E LKIV L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKRAGQFSMGMKQRLGIAIALLNSPQLLILDEPTNGLDPIGIQELRNLIRSFPTQ-G  179
            N  +K+ +Q+S+GMKQRLGIA+A+++ P+LLILDEPTNGLDP GI+E+R+LI+S+P + G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVIISSHILSEIQMTADHIGIIANGVLGYQDRIHQ  215
            +TV+ISSH+LSEI+  A  IGII +G L +QD I +
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

197) FMG_1408 in NC_010376


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (672),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 127/297 (43%), Positives = 216/297 (73%), Gaps = 5/297 (1%)

Query  1    MEKILEIKNLQKSYNKK-KVLDIDYLEIEQGSIYGLIGKNGAGKSTLMKLILGLVRKDGG  59
            ME I+  + L K YNK  +V DID L + QG++YG++G NGAGKST +K++LGL +   G
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDID-LRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQG  59

Query  60   EIKVFGQEVSPRNQKDLNKNLGALIENPSFYDHLTGYENLEIICELKGIDKAEISKTLDL  119
            +I+++G+E++ +N+  + K++G+LIE+PS+Y+HLTG EN+ I+  L ++ K +++ +L +
Sbjct  60   NINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKI  119

Query  120  VGLNNVGKKKARDYSLGMKQRLGIAIALIGSPKLLILDEPINGLDPQGIEEMRNLFKNIV  179
            V L+N  +KK  +YSLGMKQRLGIA+A++  PKLLILDEP NGLDP GIEE+R+L+K++ 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KNtstsilisshilDEMEKISTHIGILKAGKLTYNGSLEDYRKLHPPFISIQTSDNQKAA  239
             + + ++LISSH+L E+++I+T IGI++ G L +++S+ + ++   + I+I+T +   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  NLLDLD--QVRIDGKKIILGKVSNQKISEIVNFL-HGKVDIYRIEEEKESLEKLFIE  293
            +LL+       I++  + + ++ +  ++ I   L H+++D++RIEE+K SLE +F+E
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLE  296

198) spaF in NC_009089


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (669),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 113/214 (53%), Positives = 164/214 (77%), Gaps = 5/214 (2%)

Query  3    DLILETKNLSKRYGEQMAVNNVSLQIERNSIYGLLGPNGAGKSTTLKMLVGLLRPTNGRI  62
            ++I+ T+ LSK Y     V+++ L++ + ++YG+LGPNGAGKSTTLKML+GL +PT+G I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   -IFDRKPWKRES---LAKIGSLIESPALYGNLTAEENLLVHTKILGIPKDKIYEVLEIVN  118
             I+++    ++    L  IGSLIESP+ YG+LT+ EN+ +  ++L++PK ++ E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LKNTGKKRASQFSMGMKQRLGIAIALLSDPELLILDEPTNGLDPFGIQELRELIASFPKK  178
            L N  +K+ SQ+S+GMKQRLGIA+A++  P LLILDEPTNGLDP GI+E+RELI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVAQVVDNIGIINGGRLLFQG  211
             G+TV++SSH+LSE+ Q+  +IGIIN G L+FQ+
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQD  215

199) CC1_02400 in NC_021009


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (669),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 113/219 (52%), Positives = 167/219 (77%), Gaps = 5/219 (2%)

Query  1    MEMMLQTQNLCKYFRQQKAVNNVSLNIEKEQIYGLLGPNGAGKSTTLKMLTGMMKPTAGK  60
            MEM+++TQ L K + +   V+++ L + +  +YG+LGPNGAGKSTTLKML G+ KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IYFDGKLLDRKD----LSKIGALIENPPIYENLSARENLKVRQLLLGTDENRIDEVLQIV  116
            I + GK L+ K+    L  IG+LIE+P+ Y +L++ EN+ + Q LL+   + ++E L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  SLTNTGKKKAGQFSLGMKQRLGIAMALLGEPELLILDEPTNGLDPIGIEELRELIRSFPE  176
             L N  +KK +Q+SLGMKQRLGIAMA++  P LLILDEPTNGLDP GIEE+RELI+S+PE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GITVILSSHILSEVQLLADKVGIISGGILGYEGALKQ  214
            + G+TV++SSH+LSE++ +A  +GII+ G L +++++K+
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

200) ELI_2996 in NC_014624


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (672),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 115/241 (48%), Positives = 175/241 (73%), Gaps = 3/241 (1%)

Query  6    VIATKNLTKVYGDQVSVSSLDLHVRRGKIYGLLGRNGAGKTTTMRMLLGLTEPTQGAIRI  65
            +I T+ L+K Y     V  +DL+V +G +YG+LG NGAGK+TT++MLLGL+ PTQG I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   FGKD-PLKDGKALYPRIGSLIESPGFYPNLTGTENLSIFATLRGIPRKEAVKESLELVGL  124
            +GK+   K+  ++   IGSLIESP++Y +LTG EN++I   L ++P+K+ V+E+L +V L
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRL  122

Query  125  PYKDKKLFSKYSLGMKQRLAIALAVMHDPELLILDEPINGLDPIGIAEIRDLLKAFAKK-  183
              + +K  S+YSLGMKQRL+IA+A+M  P LLILDEP NGLDP GI EIR+L+K+++ K 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  184  GKTILVSSHILSEIELLADDVGIIDNGVLLEEERMSVLRDKNQMYIRFVLSDTAKAARIL  243
            G T+L+SSH+LSEI+ +A  +GII++G L+ ++ +  L+++ Q  I +   +   A ++L
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL  242

Query  244  E  244
            +
Sbjct  243  N  243

201) GPA_18440 in NC_021021


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (669),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 103/219 (48%), Positives = 160/219 (74%), Gaps = 5/219 (2%)

Query  1    MAYMLETDALTKTFKGQAAVDRCSLHVPEGTVYGLLGPNGAGKSTLLKMVCGMLRPTSGS  60
            M  ++ T+ L+K ++    V    L+VP+G+VYG+LGPNGAGKST LKM+ G+ +PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IAFAGRPWTRDS----LNSIGALIETPPLYENLTARENLRVRTTLLGLPESRIDEALAIV  116
            I + G+     +    L+ IG+LIE+P+ Y +LT+ EN+ +   LL+LP   ++EAL IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  DLANTGSKRAGQFSLGMKQRLGIALALVGHPRLLILDEPTNGLDPVGIQDLRALIRSFPK  176
             L N  +K+ +Q+SLGMKQRLGIA+A++  P+LLILDEPTNGLDP GI+++R LI+S+P 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  R-GITVVLSSHILGEVEHVADLVGIIVGGRLAYEAPLGD  214
            + G+TV++SSH+L+E++++A  +GII  G L ++ ++ +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

202) bcrA in NC_005957


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 108/233 (47%), Positives = 172/233 (74%), Gaps = 2/233 (0%)

Query  17   YGKQKSVDNLNINVQQGEIYGFIGRNGAGKTTTIRMLLSLIKPTSGTIEIFGEDLFQNQK  76
            Y K   V ++++ V QG +YGF+G NGAGK+TT++MLL+L KPT G I+I+G +L ++++
Sbjct  14   YNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNR  73

Query  77   -DILSRIGSIVEVPGFYENLTAKENLLINAKIIGVYKKNAIEDVLEIVGLQHETKKLVGK  135
              IL  IGS++E P++Y +LT+ EN+ I  +++++ KKN +++ L IV L+++ +K V++
Sbjct  74   ISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQ  132

Query  136  YSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRKLIHSLAQERNITILISSHI  195
            YSLGMKQRLGIA A++ +P LLILDEPTNGLDP GI E+R LI SL++   +T+LISSH+
Sbjct  133  YSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHL  192

Query  196  LAEVEQLVDRIGIIHEGRLLEEVSLDKLRKANRKYIEFQVNNENKAAMLLENQ  248
            L+E++Q+   IGII++G L+ + S+  L++  +  I ++ +N   A  LL+ +
Sbjct  193  LSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTK  245

203) MY9_0259 in NC_017743


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 123/303 (41%), Positives = 197/303 (66%), Gaps = 8/303 (2%)

Query  1    MTYIVQTNGLTKTYQGKEVVSDVSMHIKKGEIYGFLGPNGAGKTTIMKMLTSLVKPTSGE  60
            M  I++T+ L+K Y+    V D+ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISILGNKLTHTS-YEVLGNIGSMIEYPIFYENLTAEENLELHCEYMGYHNKKAIQEVLDM  119
            I+ILG+ L + +   +L +IGS+IE P +Y +LT+ EN+ +    ++   KK ++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKI  119

Query  120  VNLKQIDKKPVKTFSLGMKQRLGIARAILTKPDLLILDEPVNGLDPLGIKKIRQLFQVLS  179
            V L +  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI  IR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGITLLISSHLLGEIEQIADTIGVIRDGRLLEEVSMEDVRGQNTEYIELVTSNQTKAC  239
              YG+T+LISSHLL+EI+QIA +IG+I +G L+ + S+ +++ +    I +    +TK  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI----KTKNV  235

Query  240  FVLEKELHLSNFKILNEKTIRIYEA--EASQSDISKALILNDVDIESMNKKYTSLEDYFI  297
               +K L+   +  L +      E   ++  + I+  L+ +++D+  ++    SLED F+
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  NLI  300
            +L+
Sbjct  296  ELL  298

204) ycbN in NC_006270


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (672),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 124/303 (41%), Positives = 195/303 (65%), Gaps = 8/303 (2%)

Query  1    MTYIVQTSGLTKTFKGQEVVSNVSMHIRKGEIYGFLGPNGAGKTTIMKMLTSLVKPTSGE  60
            M  I++T  L+K ++    V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   INILGHKLTNRS-YEILGKIGSMIEYPIFYENLTAKENLNLHCEYMGYHNKAKIQEVLDM  119
            INILG  L +++   IL  IGS+IE P +Y +LT+ EN+ +    ++  +K +++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKK-NVNEALKI  119

Query  120  VNLKNIDSKPVKTFSLGMKQRLGIARAILTKPYLLILDEPINGLDPIGIKEIRNLFQVLS  179
            V L N  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI EIR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLISSHILNEVEQIADTIGVIRDGRLVEEVSMESVRGRNTEYIELVTPNQLHAC  239
              YGMT+LISSH+L+E++QIA +IG+I +G LV + S+  ++ R    I + T N + A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA-  238

Query  240  FVLEHELQIANFKILNDKTIRIYDA--EASQTAISKALILNDVEIESMNKKHTSLEDYFL  297
               +  L+   +  L +      +   ++  + I+  L+ +++++  ++    SLED FL
Sbjct  239  ---QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  SLI  300
             L+
Sbjct  296  ELL  298

205) ycbN in NC_006322


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (672),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 124/303 (41%), Positives = 195/303 (65%), Gaps = 8/303 (2%)

Query  1    MTYIVQTSGLTKTFKGQEVVSNVSMHIRKGEIYGFLGPNGAGKTTIMKMLTSLVKPTSGE  60
            M  I++T  L+K ++    V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   INILGHKLTNRS-YEILGKIGSMIEYPIFYENLTAKENLNLHCEYMGYHNKAKIQEVLDM  119
            INILG  L +++   IL  IGS+IE P +Y +LT+ EN+ +    ++  +K +++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKK-NVNEALKI  119

Query  120  VNLKNIDSKPVKTFSLGMKQRLGIARAILTKPYLLILDEPINGLDPIGIKEIRNLFQVLS  179
            V L N  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI EIR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLISSHILNEVEQIADTIGVIRDGRLVEEVSMESVRGRNTEYIELVTPNQLHAC  239
              YGMT+LISSH+L+E++QIA +IG+I +G LV + S+  ++ R    I + T N + A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA-  238

Query  240  FVLEHELQIANFKILNDKTIRIYDA--EASQTAISKALILNDVEIESMNKKHTSLEDYFL  297
               +  L+   +  L +      +   ++  + I+  L+ +++++  ++    SLED FL
Sbjct  239  ---QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  SLI  300
             L+
Sbjct  296  ELL  298

206) BSn5_12855 in NC_014976


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (672),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 123/303 (41%), Positives = 197/303 (66%), Gaps = 8/303 (2%)

Query  1    MTYIVQTNGLTKTYQGIEVVSNVSMHIKKGEIYGFLGPNGAGKTTIMKMLTSLVKPTSGE  60
            M  I++T+ L+K Y+ I  V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IIILGNKFTHTS-YEVLGNIGSMIEYPIFYENLTAEENLDLHCEYMGYHNKKAIQEVLDM  119
            I ILG+ + + +   +L +IGS+IE P +Y +LT+ EN+ +    ++   KK ++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKI  119

Query  120  VNLKQIDKKPVKTFSLGMKQRLGIARAILTKPDLLILDEPVNGLDPLGIKKIRQLFQVLS  179
            V L +  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI  IR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLISSHLLGEIEQIADTIGVIRDGRLLEEVSMEDVRDQNTEYIELVTSNQTRAC  239
              YGMT+LISSHLL+EI+QIA +IG+I +G L+ + S+ +++++    I +    +T+  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI----KTKNV  235

Query  240  FVLEKELQLTNFKILNEKTIRIYEA--EASQAAISKALILNDVDIESMNKKYTSLEDYFI  297
               +K L+   +  L +      E   ++  A I+  L+ +++D+  ++    SLED F+
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KLI  300
             L+
Sbjct  296  ELL  298

207) CBF_2327 in NC_017297


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (669),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 128/305 (42%), Positives = 208/305 (69%), Gaps = 14/305 (4%)

Query  1    MENILKTYNLTRKYGTTAVVDNINMNIKKGEIYGFLGRNGAGKTTTLRMIMGLISPTKGE  60
            ME I++T  L++ Y     V +I++ + +G +YGFLG NGAGK+TTL+M++GL  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   YELFGKKMGDRE---VFGRIGAIIETPGFYPNLTARENLDIHRRLMGIPNKEYVDEALEI  117
             +++GK + +++   ++  IG++IE+P++Y +LT+ EN+ I +RL+++P+K+ V+EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLTNYDIkkkkvkkYSLGMKQRLGVARALLHKPELLILDEPTNGLDPVGIKEMRETLLD  177
            V L N   K+KKV +YSLGMKQRLG+A A++  P LLILDEPTNGLDP GI E+RE +  
Sbjct  120  VRLEN--QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  178  LNKKKEITILVSSHILGEIQQLATKIGIIHNGKLLEEIDYKSFEKKNKHYINLRVDNDKR  237
            L  K  +T+L+SSH+L+EI+Q+AT IGII++G L+ +   K ++++ +  I ++     +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----K  233

Query  238  AVTILEKSMNIKDYEVTEPNKIRIYEMLDKSNDVAK---KMISEGVDVYEVNVMNDTLED  294
             V   +K +N K+Y     +     E L K +DVAK    ++   +DV+ ++  + +LED
Sbjct  234  NVVSAQKLLNTKGYMSLIQDGYLTIENL-KDSDVAKINGMLVHSNIDVFRIEEHKKSLED  292

Query  295  YFVRL  299
             F+ L
Sbjct  293  IFLEL  297

208) CLI_2337 in NC_009699


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (669),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 128/305 (42%), Positives = 208/305 (69%), Gaps = 14/305 (4%)

Query  1    MENILKTYNLTRKYGTTAVVDNINMNIKKGEIYGFLGRNGAGKTTTLRMIMGLISPTKGE  60
            ME I++T  L++ Y     V +I++ + +G +YGFLG NGAGK+TTL+M++GL  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   YELFGKKMGDRE---VFGRIGAIIETPGFYPNLTARENLDIHRRLMGIPNKEYVDEALEI  117
             +++GK + +++   ++  IG++IE+P++Y +LT+ EN+ I +RL+++P+K+ V+EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLTNYDIkkkkvkkYSLGMKQRLGVARALLHKPELLILDEPTNGLDPVGIKEMRETLLD  177
            V L N   K+KKV +YSLGMKQRLG+A A++  P LLILDEPTNGLDP GI E+RE +  
Sbjct  120  VRLEN--QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  178  LNKKKEITILVSSHILGEIQQLATKIGIIHNGKLLEEIDYKSFEKKNKHYINLRVDNDKR  237
            L  K  +T+L+SSH+L+EI+Q+AT IGII++G L+ +   K ++++ +  I ++     +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----K  233

Query  238  AVTILEKSMNIKDYEVTEPNKIRIYEMLDKSNDVAK---KMISEGVDVYEVNVMNDTLED  294
             V   +K +N K+Y     +     E L K +DVAK    ++   +DV+ ++  + +LED
Sbjct  234  NVVSAQKLLNTKGYMSLIQDGYLTIENL-KDSDVAKINGMLVHSNIDVFRIEEHKKSLED  292

Query  295  YFVRL  299
             F+ L
Sbjct  293  IFLEL  297

209) H04402_02386 in NC_017299


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 127/306 (42%), Positives = 211/306 (69%), Gaps = 16/306 (5%)

Query  1    MENILKTYNLTRKYGTTAVVDNINMNIKKGEIYGFLGRNGAGKTTTLRMIMGLISPTKGE  60
            ME I++T  L++ Y     V +I++ + +G +YGFLG NGAGK+TTL+M++GL  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   YELFGKKMGDRE---VFGRIGAIIETPGFYPNLTARENLDIHRRLMGIPNKEYVDEALEI  117
             +++GK + +++   ++  IG++IE+P++Y +LT+ EN+ I +RL+++P+K+ V+EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLTNYDIkkkkvkkYSLGMKQRLGVARALLHKPELLILDEPTNGLDPVGIKEMRETLLD  177
            V L N   K+KKV +YSLGMKQRLG+A A++  P LLILDEPTNGLDP GI E+RE +  
Sbjct  120  VRLEN--QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  178  LNKKKEITILVSSHILGEIQQLATKIGIIHNGKLLEEIDYKSFEKKNRHYINLRVDNDKR  237
            L  K  +T+L+SSH+L+EI+Q+AT IGII++G L+ +   K ++++ +  I ++     +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----K  233

Query  238  AVTILEKSMNIKDY-EVTEPNRIRIYEMLDKSNDVAK---KMISEGVDVYEVNVMNDTLE  293
             V   +K +N K+Y  + +   + I ++  K +DVAK    ++   +DV+ ++  + +LE
Sbjct  234  NVVSAQKLLNTKGYMSLIQDGYLTIENL--KDSDVAKINGMLVHSNIDVFRIEEHKKSLE  291

Query  294  DYFVRL  299
            D F+ L
Sbjct  292  DIFLEL  297

210) CLD_2289 in NC_010516


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (669),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 127/306 (42%), Positives = 211/306 (69%), Gaps = 16/306 (5%)

Query  1    MENILKTYNLTRKYGTTAVVDNINMNIKKGEIYGFLGRNGAGKTTTLRMIMGLISPTKGE  60
            ME I++T  L++ Y     V +I++ + +G +YGFLG NGAGK+TTL+M++GL  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   YELFGKKMGDRE---VFGRIGAIIETPGFYPNLTARENLDIHRRLMGIPNKEYVDEALEI  117
             +++GK + +++   ++  IG++IE+P++Y +LT+ EN+ I +RL+++P+K+ V+EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLTNYDIkkkkvkkYSLGMKQRLGVARALLHKPELLILDEPTNGLDPVGIKEMRETLLD  177
            V L N   K+KKV +YSLGMKQRLG+A A++  P LLILDEPTNGLDP GI E+RE +  
Sbjct  120  VRLEN--QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  178  LNKKKEITILVSSHILGEIQQLATKIGIIHNGKLLEEIDYKSFEKKNRHYINLRVDNDKR  237
            L  K  +T+L+SSH+L+EI+Q+AT IGII++G L+ +   K ++++ +  I ++     +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----K  233

Query  238  AVTILEKSMNIRDY-EVTEPNRIRIYEMLDKSNDVAK---KMISEGIDVYEVNVMNDTLE  293
             V   +K +N ++Y  + +   + I ++  K +DVAK    ++   IDV+ ++  + +LE
Sbjct  234  NVVSAQKLLNTKGYMSLIQDGYLTIENL--KDSDVAKINGMLVHSNIDVFRIEEHKKSLE  291

Query  294  DYFVRL  299
            D F+ L
Sbjct  292  DIFLEL  297

211) CLJ_B2593 in NC_012658


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  181 bits (669),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 127/305 (42%), Positives = 208/305 (69%), Gaps = 14/305 (4%)

Query  1    MENILKTYNLTRKYGTTAVVDNINMNIKKGEIYGFLGRNGAGKTTTLRMIMGLISPTKGE  60
            ME I++T  L++ Y     V +I++ + +G +YGFLG NGAGK+TTL+M++GL  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   YELFGKKMGDRE---VFGRIGAIIETPGFYPNLTARENLDIHRRLMGIPNKEYVDEALEI  117
             +++GK + +++   ++  IG++IE+P++Y +LT+ EN+ I +RL+++P+K+ V+EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLTNYDIkkkkvkkYSLGMKQRLGVARALLHKPELLILDEPTNGLDPVGIKEMRETLLD  177
            V L N   K+KKV +YSLGMKQRLG+A A++  P LLILDEPTNGLDP GI E+RE +  
Sbjct  120  VRLEN--QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  178  LNKKKEITILVSSHILGEIQQLATKIGIIHNGKLLEEIDYKSFEKKNRHYINLRVGNDKR  237
            L  K  +T+L+SSH+L+EI+Q+AT IGII++G L+ +   K ++++ +  I ++     +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----K  233

Query  238  AVTILEKSMNIKDYEVTEPNKIRIYEMLDKSNDIAK---KMISEGVDVYEVNVMNDTLED  294
             V   +K +N K+Y     +     E L K +D+AK    ++   +DV+ ++  + +LED
Sbjct  234  NVVSAQKLLNTKGYMSLIQDGYLTIENL-KDSDVAKINGMLVHSNIDVFRIEEHKKSLED  292

Query  295  YFVRL  299
             F+ L
Sbjct  293  IFLEL  297

212) Cbei_2669 in NC_009617


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  180 bits (666),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 136/300 (46%), Positives = 213/300 (71%), Gaps = 7/300 (2%)

Query  22   MNYILKTDNLTKQYGTQLSVSNLCINIEERDIYGFIGRNGAGKTTTLKMILGLIPATSGK  81
            M+ I++T+ L+K+Y   + V ++ + + +  +YGF+G NGAGK+TTLKM+LGL  +T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  82   ITVLGKEVNKKD-ISYLRNIGSIIEFPSCYENLTAYENLKLHSNYMGLEDKSIIDECldk  140
            I +LGKE+N K+ IS L++IGS+IE PS Y +LT+ EN+ +    ++L  K++ +E L  
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNV-NEALKI  119

Query  141  vdllndkkkkvkEYSLGMKQRLGIARAILHKPKLLILDEPTNGLDPLGIRDLRNFILRLA  200
            V L N+K+KKV +YSLGMKQRLGIA AI+  PKLLILDEPTNGLDP GI ++R++I  L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  201  NEENMTFIISSHILSELELTVTKLGIIEKGILLKEASMSEINNSYEEYvdvkvddvkkAQ  260
            +   MT +ISSH+LSE++   T +GII+ G L+ + S+ E++N  +  + +K  +V  AQ
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  261  KVLNENLNLDSSLIDDNYLRL-NIKGKEMKTNYISKALVNNSVELFELIKHKEGLEDYFV  319
            K+LN +  +  SLI+D YL + N+K+ ++    I+  LV++++++F +  HK +LED F+
Sbjct  240  KLLNTKGYM--SLIQDGYLTIENLKDSDVAK--INGMLVHSNIDVFRIEEHKKSLEDIFL  295

213) Cbei_3325 in NC_009617


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  180 bits (668),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 112/217 (52%), Positives = 166/217 (77%), Gaps = 5/217 (2%)

Query  3    EFILETKNLCKNFKKQEAVKDISVLVKKNSIYGLLGPNGAGKSTLLKMVTGMLRPSSGEI  62
            E I+ T+ L K+++K   VKDI + V + ++YG+LGPNGAGKST LKM+ G+ +P+ G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   LFDGHKWSRKD----LREIGSLIESAPLYENLTAKENLKVRTTVLGLPDSRIEEVLHVVE  118
             + G   + K+    L++IGSLIES++ Y +LT+ EN+ +   +L+LP   ++E L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LENTGKKRAGQFSMGMKQRLGIAIALLNNPKLLILDEPTNGLDPFGIQELRELIRSFPKK  178
            LEN  +K+ +Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHMLSEVEQIADHIGIISGGILGYQGELK  214
             G+TV++SSH+LSE++QIA  IGII+ G L +Q+ +K
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

214) RO1_33960 in NC_021012


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  180 bits (668),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 113/219 (52%), Positives = 167/219 (77%), Gaps = 5/219 (2%)

Query  8    MEMMLQTQNLCKYFRKQKAVNNVSLNIEKKQIYGLLGPNGAGKSTTLKMLTGMMKPTAGK  67
            MEM+++TQ L K + K   V+++ L + +  +YG+LGPNGAGKSTTLKML G+ KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  68   IYFDGKLLDRKD----LSKIGALIENPPIYENLSARENLKVRQLLLGTDENRIDEVLQIV  123
            I + GK L+ K+    L  IG+LIE+P+ Y +L++ EN+ + Q LL+   + ++E L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  124  SLTNTGKKKAGQFSLGMKQRLGISMALLGEPELLILDEPTNGLDPIGIEELRELIRSFPE  183
             L N  +KK +Q+SLGMKQRLGI+MA++  P LLILDEPTNGLDP GIEE+RELI+S+PE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  184  Q-GITVILSSHILSEVQLLADKVGIISGGILGYEGALKQ  221
            + G+TV++SSH+LSE++ +A  +GII+ G L +++++K+
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

215) CK5_05640 in NC_021022


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  180 bits (667),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 113/219 (52%), Positives = 167/219 (77%), Gaps = 5/219 (2%)

Query  1    MEMMLQTQNLCKYFRKQKAVNNVSFNIEKEQIYGLLGPNGAGKSTTLKMLTGMMKPTAGK  60
            MEM+++TQ L K + K   V+++ + + +  +YG+LGPNGAGKSTTLKML G+ KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IYFDGKLLDRKD----LSKIGALIENPPIYENLSARENLKVRQLLLGTDENRIDEVLQIV  116
            I + GK L+ K+    L  IG+LIE+P+ Y +L++ EN+ + Q LL+   + ++E L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  SLTNTGKKKAGQFSLGMKQRLGIAMALLGEPELLILDEPTNGLDPIGIEELRELIRSFPE  176
             L N  +KK +Q+SLGMKQRLGIAMA++  P LLILDEPTNGLDP GIEE+RELI+S+PE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GITVILSSHILSEVQLLADKVGIISGGILGYEGALKQ  214
            + G+TV++SSH+LSE++ +A  +GII+ G L +++++K+
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

216) spaF in NC_013315


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  180 bits (667),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 113/214 (53%), Positives = 164/214 (77%), Gaps = 5/214 (2%)

Query  26   DLILETKNLSKRYGEQMAVNNVSLQIERNSIYGLLGPNGAGKSTTLKMLVGLLRPTDGRI  85
            ++I+ T+ LSK Y     V+++ L++ + ++YG+LGPNGAGKSTTLKML+GL +PT+G I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  86   -IFDRKPWKRES---LAKIGSLIESPALYGNLTAEENLLVHTKILGIPKDKIYEVLEIVN  141
             I+++    ++    L  IGSLIESP+ YG+LT+ EN+ +  ++L++PK ++ E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  142  LKNTGKKRASQFSMGMKQRLGIAIALLSDPELLILDEPTNGLDPFGIQELRELIASFPKK  201
            L N  +K+ SQ+S+GMKQRLGIA+A++  P LLILDEPTNGLDP GI+E+RELI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  202  -GITVILSSHILSEVAQVVDNIGIINGGRLLFQG  234
             G+TV++SSH+LSE+ Q+  +IGIIN G L+FQ+
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQD  215

217) spaF in NC_013316


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  180 bits (667),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 113/214 (53%), Positives = 164/214 (77%), Gaps = 5/214 (2%)

Query  26   DLILETKNLSKRYGEQMAVNNVSLQIERNSIYGLLGPNGAGKSTTLKMLVGLLRPTDGRI  85
            ++I+ T+ LSK Y     V+++ L++ + ++YG+LGPNGAGKSTTLKML+GL +PT+G I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  86   -IFDRKPWKRES---LAKIGSLIESPALYGNLTAEENLLVHTKILGIPKDKIYEVLEIVN  141
             I+++    ++    L  IGSLIESP+ YG+LT+ EN+ +  ++L++PK ++ E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  142  LKNTGKKRASQFSMGMKQRLGIAIALLSDPELLILDEPTNGLDPFGIQELRELIASFPKK  201
            L N  +K+ SQ+S+GMKQRLGIA+A++  P LLILDEPTNGLDP GI+E+RELI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  202  -GITVILSSHILSEVAQVVDNIGIINGGRLLFQG  234
             G+TV++SSH+LSE+ Q+  +IGIIN G L+FQ+
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQD  215

218) Elen_1167 in NC_013204


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  180 bits (666),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 103/219 (48%), Positives = 162/219 (74%), Gaps = 5/219 (2%)

Query  1    MGFMVETNDLTRTFKGQKAVDRVSLHVPEGSVYGLLGPNGAGKSTLLKMLCGMLRPTSGE  60
            M  ++ T+ L++ ++    V  + L+VP+G+VYG+LGPNGAGKST LKML G+ +PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IAFAGRPWTRDD----LNDIGALIESPPLYDNLTARENLRVRTSLLGVPESRIDEALATV  116
            I + G+     +    L+DIG+LIESP+ Y++LT+ EN+ +   LL++P   ++EAL  V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLPETGRKRAGQFSMGMKQRLGIALALVGHPRLLILDEPTNGLDPVGIQELRALVRSFPE  176
             L +   K+ +Q+S+GMKQRLGIA+A++  P+LLILDEPTNGLDP GI+E+R L++S+PE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  -HGITVVLSSHILNEVEHMADLVGIIVEGRLAYEAPLGE  214
              G+TV++SSH+L+E++++A  +GII +G L ++ ++ E
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

219) CLM_2591 in NC_012563


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  180 bits (668),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 128/305 (42%), Positives = 208/305 (69%), Gaps = 14/305 (4%)

Query  1    MENILQTYNLTRKYGTTAVVDNINMNIKKGEIYGFLGRNGAGKTTTLRMIMGLISPTKGE  60
            ME I++T  L++ Y     V +I++ + +G +YGFLG NGAGK+TTL+M++GL  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   YELFGKKMRDRE---VFGRIGAIIETPGFYPNLTARENLDIHRRLMGIPNKEYVDEALEI  117
             +++GK + +++   ++  IG++IE+P++Y +LT+ EN+ I +RL+++P+K+ V+EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLTNYDIkkkkvkkYSLGMKQRLGVARALLHKPELLILDEPTNGLDPVGIKEMRETLLD  177
            V L N   K+KKV +YSLGMKQRLG+A A++  P LLILDEPTNGLDP GI E+RE +  
Sbjct  120  VRLEN--QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  178  LNKKKEITILVSSHILGEIQQLATKIGIIHNGKLLEEIDYKSFEKKNRHYINLRVDNDKR  237
            L  K  +T+L+SSH+L+EI+Q+AT IGII++G L+ +   K ++++ +  I ++     +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----K  233

Query  238  AVTILEKSMNIKDYEVTEPNKIRIYEMLHKSNDVAK---KMISEGVDVYEVNVMNDTLED  294
             V   +K +N K+Y     +     E L K +DVAK    ++   +DV+ ++  + +LED
Sbjct  234  NVVSAQKLLNTKGYMSLIQDGYLTIENL-KDSDVAKINGMLVHSNIDVFRIEEHKKSLED  292

Query  295  YFVRL  299
             F+ L
Sbjct  293  IFLEL  297

220) CLK_1733 in NC_010520


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  180 bits (667),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 128/305 (42%), Positives = 208/305 (69%), Gaps = 14/305 (4%)

Query  1    MENILQTYNLTRKYGTTAVVDNINMNIKKGEIYGFLGRNGAGKTTTLRMIMGLISPTKGE  60
            ME I++T  L++ Y     V +I++ + +G +YGFLG NGAGK+TTL+M++GL  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   YELFGKKMGDRE---VFGRIGAIIETPGFYPNLTARENLDIHRRLMGIPNKEYVDEALEI  117
             +++GK + +++   ++  IG++IE+P++Y +LT+ EN+ I +RL+++P+K+ V+EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLTNYDIkkkkvkkYSLGMKQRLGVARALLHKPELLILDEPTNGLDPVGIKEMRETLLD  177
            V L N   K+KKV +YSLGMKQRLG+A A++  P LLILDEPTNGLDP GI E+RE +  
Sbjct  120  VRLEN--QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  178  LNKKKEITILVSSHILGEIQQLATKIGIIHNGKLLEEIDYKSFEKKNRHYINLRVDNDKR  237
            L  K  +T+L+SSH+L+EI+Q+AT IGII++G L+ +   K ++++ +  I ++     +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----K  233

Query  238  AVTILEKSMNIKDYEVTEPNKIRIYEMLDKSNDVAK---KMISEGVDVYEVNVMNDTLED  294
             V   +K +N K+Y     +     E L K +DVAK    ++   +DV+ ++  + +LED
Sbjct  234  NVVSAQKLLNTKGYMSLIQDGYLTIENL-KDSDVAKINGMLVHSNIDVFRIEEHKKSLED  292

Query  295  YFVRL  299
             F+ L
Sbjct  293  IFLEL  297

221) KNP414_07860 in NC_015690


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  180 bits (668),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 113/279 (41%), Positives = 195/279 (70%), Gaps = 4/279 (1%)

Query  21   IRGIDLELRRGEVFGFLGPNGAGKTTTIRMLVGLIRPTAGTIEVCGYDV-DKQFPQAMSN  79
            +++IDL + +G V+GFLGPNGAGK+TT++ML+GL +PT G I++ G ++ +K+    + +
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  80   LGCIVENPELYGYLSGWSNLQYFARMMDGVDEARIREVVELVGLSARIHDKVKTYSLGMR  139
            +G ++E+P  YG L+G  N+    R++D +    + E + +V L  + + KV  YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  140  QRVGIAQALLGRPKVLILDEPTNGLDPSGIREMREFIRFLAEKEGLTVFVSSHLLGEIQQ  199
            QR+GIA A++  PK+LILDEPTNGLDP+GI E+RE+I+ L+EK G+TV++SSHLL+EI+Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  200  LCDRVAIISKGEVVRVDAVHTLLSR-QERVLWKLSSPEKGRQVLEGLTPDVERQEEYV-V  257
            +   ++II+ GE+V  D++  L +R Q ++  K  +   ++++L+        Q+ Y+ +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  258  TPYQEGEIGRWNRALVEAGVDVLEMNRKLQSLEDLFLEL  296
               +++++++ N  LV++ +DV+ ++   +SLED+FLEL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

222) ROI_06030 in NC_021040


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (662),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 111/219 (51%), Positives = 168/219 (77%), Gaps = 5/219 (2%)

Query  1    MEMMLQTQNLCKYFRKQKAVNNVSLNIEKDQIYGLLGPNGAGKSTTLKMLTGMMKPTAGK  60
            MEM+++TQ L K + K   V+++ L + ++ +YG+LGPNGAGKSTTLKML G+ KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   I-YFDRKLWDRKD---LSKIGALIENPPIYENLSARENLKVRQLLLGADENRIDEVLQIV  116
            I  +++ L +++    L  IG+LIE+P+ Y +L++ EN+ + Q LL+   + ++E L+IV
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  SLTNTGKKKAGQFSLGMKQRLGIAMALLGEPELLILDEPTNGLDPIGIEELRELIRSFPE  176
             L N  +KK +Q+SLGMKQRLGIAMA++  P LLILDEPTNGLDP GIEE+RELI+S+PE
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GITVILSSHILSEVQLLADKVGIISGGILGYEGALKQ  214
            + G+TV++SSH+LSE++ +A  +GII+ G L +++++K+
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

223) CLJU_c09140 in NC_014328


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (662),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 105/215 (49%), Positives = 164/215 (77%), Gaps = 5/215 (2%)

Query  5    ILQTKNLCKNFKGQLAANNISFAIKENSVYGLLGPNGAGKSTTLKMITGILKKTSGEIIF  64
            I++T+ L K+++  +  ++I + + + +VYG+LGPNGAGKSTTLKM+ G+ K T G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   EGHPWSRKD----LKDIGALIEAPPLYENLTARENLKVRTTLLGLKKSRIDEVLQTVDLT  120
             G   + K+    LKDIG+LIE+P+ Y +LT+ EN+ +   LL+L K  ++E L+ V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  DTGKKRAGQFSMGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQDLRNLIRSFPEQ-G  179
            +  +K+ +Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+++R+LI+S+PE+ G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILSEVELIADHIGIISNGILGYEAKIN  214
            +TV++SSH+LSE++ IA  IGII++G L ++  I+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

224) Smon_0454 in NC_013515


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 133/298 (45%), Positives = 205/298 (69%), Gaps = 7/298 (2%)

Query  1    MSAVICVNDLTKEYNGTRVVDCVSFSVSKGEIYGLLGRNGAGKTTIMKMLLGLVNPTEGS  60
            M  +I  + L+KEYN    V  + + V++G +YG+LG NGAGK+T +KMLLGL +PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IAILGKDMRRNEERDVLKKVGCIIENPGFYPNLTGTENLEIFSKLRGLEQICVQKALELV  120
            I ILGK++  ++   +LK +G +IE+P++Y +LTG EN+ I  +L +L +  V+ AL +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  121  NLPYRDKKLFSKYSLGMKQRLAIANAIMHNPDILILDEPINGLDPIGISEVRVLLKKLKE  180
             L  + +K  S+YSLGMKQRL+IA AIM  P +LILDEP NGLDP GI E+R L+K L E
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  181  S-GVsilisshilseleslADRIGIINSGKMIEEISVQEWRNKENSSIRVFVKDIDKAKM  239
              G+++LISSH+LSE++ +A  IGIIN G ++ + S++E +N+ +S I +  K++  A+ 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  240  ILNDRGINSECISEFNEGLLI--NSSNLSVAELNKIFVTNNIEIVGIVEDKITLEDYF  295
            +LN +G     +S +++G L   N  +  VA +N ++V +NI++  I E+K +LED F
Sbjct  241  LLNTKG----YMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

225) LM5923_0791 in NC_013768


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 188/272 (70%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYSFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y+ LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

226) LMLG_1591 in NC_017547


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 188/272 (70%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYSFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y+ LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

227) LMHCC_1872 in NC_011660


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 188/272 (70%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYSFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y+ LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

228) yadG in NC_017537


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 188/272 (70%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYSFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y+ LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

229) lmo4a_0768 in NC_017529


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 188/272 (70%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYSFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y+ LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

230) M642_01405 in NC_021823


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 188/272 (70%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYSFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y+ LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

231) LM5578_0836 in NC_013766


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 188/272 (70%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYSFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y+ LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

232) HPL003_14420 in NC_016641


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (665),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 125/303 (42%), Positives = 199/303 (66%), Gaps = 8/303 (2%)

Query  1    MTYILRTHQLTKALKGNEIVSGVSMNVRQGETYGFLGPNGAGKTTIMKMITNLLKPTSGE  60
            M  I+RT++L+K  +    V ++ + V QG  YGFLGPNGAGK+T +KM+  L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IELFGEKLTPKS-YHLLGRMGSIIEYPIFYDRLTAQQNLELHCEYMGYYNKQAVRDALEL  119
            I+++G  L  K+   +L  +GS+IE P +Y++LT+ +N+ +    ++   K+ V +AL +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  120  VNLRNAGDKPVKDFSLGMKQRLGIARAIATKPELLILDEPINGLDPMGIKEIRQLFHMLC  179
            V L N  +K V ++SLGMKQRLGIA AI   P LLILDEP NGLDP GI EIR+L+  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTILVSSHILVEIEQIADTVGVINHGRLIEEVSMEQVRETNTEYIEFTTNDCKKAA  239
              YGMT+L+SSH+L EI+QIA ++G+INHG L+ + S+ ++++     I + T++   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  YVLSHH--LNLTNIRVLNDQNIRIYDTSVPQKQITKTLILNEVEVDSIHQKNSTLEDYFM  297
             +L+    ++L +   L  +N++  D+ V+  +I   L+ ++++V  I++ + +LED F+
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLK--DSDVA--KINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  RLL  300
             LL
Sbjct  296  ELL  298

233) Achl_0607 in NC_011886


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (665),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 101/248 (41%), Positives = 170/248 (69%), Gaps = 7/248 (2%)

Query  17   GLTIETHGLTKKFGHQVAVDGVNLAVPPGSVFGFLGPNGSGKTTTIRMLLGLASASAGTV  76
             + I T+ L+K +     V +++L VP G+V+GFLGPNG+GK+TT++MLLGLA ++ G +
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  77   DLLGMEMPRRFH-EVLPHVGALVEGPAFYPFLSGAANLHRLDAATRHAVPATRRARVDRA  135
            ++LG E+  + +  +L ++G+L+E+P++Y  L+G  N+     +  + +    +  V+ A
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENM-----TIMQRLLDLPKKNVNEA  116

Query  136  LDQVGLAHAANKRVHAYSLGMKQRLGIANALLSHRDLLVLDEPTNGLDPQGTREVRHLVR  195
            L  V L +  NK+V  YSLGMKQRLGIA A++    LL+LDEPTNGLDP G  E+R+L++
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  196  SLANN-GTTVFVSSHLLAEVDQMCTHAAVMSAGKLVAQGSLADLRRTGSARVRLLTPDGR  254
            SL+++ G TV++SSHLL+E+DQ+ T  ++++ G LV Q+S+ +L+  G +++ + T +  
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVV  236

Query  255  QAREVLAS  262
             A+ +L +
Sbjct  237  SAQKLLNT  244

234) CLB_2227 in NC_009697


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 127/306 (42%), Positives = 211/306 (69%), Gaps = 16/306 (5%)

Query  1    MENILKTYNLTRKYGTTAVVDNINMNIKKGEIYGFLGRNGAGKTTTLRMIMGLIYPTKGE  60
            ME I++T  L++ Y     V +I++ + +G +YGFLG NGAGK+TTL+M++GL  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   YELFGKKMGDRE---VFGRIGAIIETPGFYPNLTARENLDIHRRLMGIPNKEYVDEALEI  117
             +++GK + +++   ++  IG++IE+P++Y +LT+ EN+ I +RL+++P+K+ V+EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLTNYDIkkkkvkkYSLGMKQRLGVARALLHKPELLILDEPTNGLDPVGIKEMRETLLD  177
            V L N   K+KKV +YSLGMKQRLG+A A++  P LLILDEPTNGLDP GI E+RE +  
Sbjct  120  VRLEN--QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  178  LNKKKEITILVSSHILGEIQQLATKIGIIHNGKLLEEIDYKSFEKKNRHYINLRVDNDKR  237
            L  K  +T+L+SSH+L+EI+Q+AT IGII++G L+ +   K ++++ +  I ++     +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----K  233

Query  238  AVTILEKSMNIKDY-EVTEPNRIRIYEMLDKSNDVAK---KMISEGVDVYEVNVMNDTLE  293
             V   +K +N K+Y  + +   + I ++  K +DVAK    ++   +DV+ ++  + +LE
Sbjct  234  NVVSAQKLLNTKGYMSLIQDGYLTIENL--KDSDVAKINGMLVHSNIDVFRIEEHKKSLE  291

Query  294  DYFVRL  299
            D F+ L
Sbjct  292  DIFLEL  297

235) CBO2283 in NC_009495


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 127/306 (42%), Positives = 211/306 (69%), Gaps = 16/306 (5%)

Query  1    MENILKTYNLTRKYGTTAVVDNINMNIKKGEIYGFLGRNGAGKTTTLRMIMGLIYPTKGE  60
            ME I++T  L++ Y     V +I++ + +G +YGFLG NGAGK+TTL+M++GL  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   YELFGKKMGDRE---VFGRIGAIIETPGFYPNLTARENLDIHRRLMGIPNKEYVDEALEI  117
             +++GK + +++   ++  IG++IE+P++Y +LT+ EN+ I +RL+++P+K+ V+EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLTNYDIkkkkvkkYSLGMKQRLGVARALLHKPELLILDEPTNGLDPVGIKEMRETLLD  177
            V L N   K+KKV +YSLGMKQRLG+A A++  P LLILDEPTNGLDP GI E+RE +  
Sbjct  120  VRLEN--QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  178  LNKKKEITILVSSHILGEIQQLATKIGIIHNGKLLEEIDYKSFEKKNRHYINLRVDNDKR  237
            L  K  +T+L+SSH+L+EI+Q+AT IGII++G L+ +   K ++++ +  I ++     +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----K  233

Query  238  AVTILEKSMNIKDY-EVTEPNRIRIYEMLDKSNDVAK---KMISEGVDVYEVNVMNDTLE  293
             V   +K +N K+Y  + +   + I ++  K +DVAK    ++   +DV+ ++  + +LE
Sbjct  234  NVVSAQKLLNTKGYMSLIQDGYLTIENL--KDSDVAKINGMLVHSNIDVFRIEEHKKSLE  291

Query  294  DYFVRL  299
            D F+ L
Sbjct  292  DIFLEL  297

236) CLC_2210 in NC_009698


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 127/306 (42%), Positives = 211/306 (69%), Gaps = 16/306 (5%)

Query  1    MENILKTYNLTRKYGTTAVVDNINMNIKKGEIYGFLGRNGAGKTTTLRMIMGLIYPTKGE  60
            ME I++T  L++ Y     V +I++ + +G +YGFLG NGAGK+TTL+M++GL  PT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   YELFGKKMGDRE---VFGRIGAIIETPGFYPNLTARENLDIHRRLMGIPNKEYVDEALEI  117
             +++GK + +++   ++  IG++IE+P++Y +LT+ EN+ I +RL+++P+K+ V+EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLTNYDIkkkkvkkYSLGMKQRLGVARALLHKPELLILDEPTNGLDPVGIKEMRETLLD  177
            V L N   K+KKV +YSLGMKQRLG+A A++  P LLILDEPTNGLDP GI E+RE +  
Sbjct  120  VRLEN--QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  178  LNKKKEITILVSSHILGEIQQLATKIGIIHNGKLLEEIDYKSFEKKNRHYINLRVDNDKR  237
            L  K  +T+L+SSH+L+EI+Q+AT IGII++G L+ +   K ++++ +  I ++     +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----K  233

Query  238  AVTILEKSMNIKDY-EVTEPNRIRIYEMLDKSNDVAK---KMISEGVDVYEVNVMNDTLE  293
             V   +K +N K+Y  + +   + I ++  K +DVAK    ++   +DV+ ++  + +LE
Sbjct  234  NVVSAQKLLNTKGYMSLIQDGYLTIENL--KDSDVAKINGMLVHSNIDVFRIEEHKKSLE  291

Query  294  DYFVRL  299
            D F+ L
Sbjct  292  DIFLEL  297

237) CLJU_c37410 in NC_014328


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (665),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 105/217 (49%), Positives = 167/217 (77%), Gaps = 5/217 (2%)

Query  3    DLILETKDLCKNFKGQMAVNNISLKVKKNSIYGLLGPNGAGKSTALKMITGMLRKSSGEI  62
            ++I+ T+ L K+++    V++I L+V + ++YG+LGPNGAGKST+LKM+ G+ + + G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   FFEGHNWSRND----LKNVGALIEGAPLYGNLTAKENLKVRTTVLGLPDKRIDEVLEIVD  118
             + G + + ++    LK++G+LIE+++ YG+LT+ EN+ +   +L+LP K ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LKNTGKKRAQQFSMGMKQRLGIAIALLNNPKLLILDEPTNGLDPFGIQELRELIRSFP-K  177
            L N  +K+  Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  178  QGITVILSSHILSEVEQVVQEIGIISGGILGYQGDMK  214
             G+TV++SSH+LSE++Q+   IGII+ G L +Q+ +K
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

238) CDBI1_02240 in NC_017179


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (664),  Expect = 8e-47, Method: Compositional matrix adjust.
 Identities = 112/214 (53%), Positives = 164/214 (77%), Gaps = 5/214 (2%)

Query  3    DLILETKNLSKRYGEQMAVNNVSLQIERNSIYGLLGPNGAGKSTTLKMLVGLLRPTDGRI  62
            ++I+ T+ LSK Y     V+++ L++ + ++YG+LGPNGAGKSTTLKML+GL +PT+G I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   -IFDRKPWKRES---LAKIGSLIESPALYGNLTAEENLLVHTKILGIPKDKIYEVLEIVN  118
             I+++    ++    L  IGSLIESP+ YG+LT+ EN+ +  ++L++PK ++ E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LKNTGKKRASQFSMGMKKRLGIAIALLSDPELLILDEPTNGLDPFGIQELRELIASFPKK  178
            L N  +K+ SQ+S+GMK+RLGIA+A++  P LLILDEPTNGLDP GI+E+RELI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVAQVVDNIGIINGGRLLFQG  211
             G+TV++SSH+LSE+ Q+  +IGIIN G L+FQ+
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQD  215

239) Clocl_0769 in NC_016627


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (663),  Expect = 9e-47, Method: Compositional matrix adjust.
 Identities = 112/217 (52%), Positives = 168/217 (78%), Gaps = 5/217 (2%)

Query  3    ELILETRNLKKYYGNQLAVKDVSLKIPKGTVYGLLGPNGAGKSTTLKMITGLMKPSEGEI  62
            E+I+ T+ L K Y + + VKD+ L++P+G+VYG+LGPNGAGKSTTLKM+ GL KP++G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   IAFGEPWQRKH---LLR-IGSLIETPALYGNLTAEENLLVHTKLMGIQREKIYEVLELVD  118
              +G   + K+   +L+ IGSLIE+P+ YG+LT+ EN+ +  +L+++ + ++ E L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LKNTGKKLASKFSMGMKQRLGIAIALIGDPELLILDEPTNGLDPVGIQELRDLICSFPKR  178
            L N  +K  S++S+GMKQRLGIA+A++  P LLILDEPTNGLDP GI+E+R+LI S+P +
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVLLSSHILSEVSQIVDNIGIISEGILKYQGRIN  214
             G+TVL+SSH+LSE+ QI  +IGII++G L +Q+ I+
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

240) PM3016_7378 in NC_016935


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  179 bits (665),  Expect = 9e-47, Method: Compositional matrix adjust.
 Identities = 113/279 (41%), Positives = 194/279 (70%), Gaps = 4/279 (1%)

Query  21   IRGIDLELRRGEVFGFLGPNGAGKTTTIRMLVGLIRPTAGTIEVCGYDV-DKQFPQAMSN  79
            +++IDL + +G V+GFLGPNGAGK+TT++ML+GL +PT G I++ G ++ +K+    + +
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  80   LGCIVENPELYGYLSGWSNLQYFARMMDGVDEARIREVVELVGLSARIHDKVKTYSLGMR  139
            +G ++E+P  YG L+G  N+    R++D +    + E + +V L  + + KV  YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  140  QRVGIAQALLGRPKVLILDEPTNGLDPSGIREMREFIRFLAEKEGLTVFVSSHLLGEIQQ  199
            QR+GIA A++  PK+LILDEPTNGLDP+GI E+RE+I+ L+EK G+TV++SSHLL+EI+Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  200  LCDRVAIISKGEVVRVDAVHTLLSR-QERVLWKLSSPEKGRQVLEGLTPDVERQEEYV-V  257
            +   ++II+ GE+V  D++  L +R Q ++  K  +   ++++L+        Q+ Y+ +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  258  TPYQEGEIGRWNRALVEAGVDVLEMNRKLPSLEDLFLEL  296
               +++++++ N  LV++ +DV+ ++    SLED+FLEL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

241) KSO_003630 in NC_020272


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 108/218 (50%), Positives = 158/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNIIETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGMLQQTSGE  60
            M  II T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHTWKRED----LKSIGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK IGSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGIALALLNRPSLLILDEPTNGLDPMGIQDLREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

242) spaF in NC_016784


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 108/218 (50%), Positives = 158/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNIIETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGMLQQTSGE  60
            M  II T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHTWKRED----LKSIGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK IGSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGIALALLNRPSLLILDEPTNGLDPMGIQDLREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

243) spaF in NC_022075


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (658),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 108/218 (50%), Positives = 158/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNIIETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGILQQTSGE  60
            M  II T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHTWKRED----LKSIGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK IGSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGIALALLNRPSLLILDEPTNGLDPMGIQDLREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

244) spaF in NC_022081


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 108/218 (50%), Positives = 158/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNIIETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGMLQQTSGE  60
            M  II T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHTWKRED----LKSIGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK IGSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGIALALLNRPSLLILDEPTNGLDPMGIQDLREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

245) LMRG_00444 in NC_017544


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

246) lmo0756 in NC_003210


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

247) LMKG_01121 in NC_017546


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

248) LMOSLCC2372_0766 in NC_018588


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

249) LMOSLCC2479_0764 in NC_018589


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

250) LMOSLCC5850_0756 in NC_018592


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

251) LMOSLCC7179_0733 in NC_018593


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

252) M639_13875 in NC_021837


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVAHLLS-SRAQLRWRVTPIEQAKAFLESVTEVE-VDGEYLVTA--MNEE  262
            + +G ++  D + +L + +++Q+  +   +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIKVHEIDKRKPSLEDLFLEL  294
             A  N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

253) B2K_37235 in NC_017672


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 112/279 (41%), Positives = 193/279 (70%), Gaps = 4/279 (1%)

Query  21   IRSIDLELRRGEVFGFLGPNGAGKTTTIRMLVGLIRPTAGTIEVCGYDV-DKQFPQAMSN  79
            ++ IDL + +G V+GFLGPNGAGK+TT++ML+GL +PT G I++ G ++ +K+    + +
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  80   LGCIVENPELYGYLSGWSNLQYFARMMDGVDEARIREVVELVGLSARIHDKLKTYSLGMR  139
            +G ++E+P  YG L+G  N+    R++D +    + E + +V L  + + K+  YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  140  QRVGIAQALLGRPKVLILDEPTNGLDPSGIREMREFIRFLAEKEGLTVFVSSHLLGEIQQ  199
            QR+GIA A++  PK+LILDEPTNGLDP+GI E+RE+I+ L+EK G+TV++SSHLL+EI+Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  200  LCDRVAIISKGEVVRVDAVHTLLSR-QERVLWKLSSPEKGRQVLEGLTPDVERQEEYV-V  257
            +   ++II+ GE+V  D++  L +R Q ++  K  +   ++++L+        Q+ Y+ +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  258  TPYQEGEIGRWNRALVEAGVDVLEMNRKLPSLEDLFLEL  296
               +++++++ N  LV++ +DV+ ++    SLED+FLEL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

254) Acel_0929 in NC_008578


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (660),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 110/240 (46%), Positives = 164/240 (69%), Gaps = 9/240 (3%)

Query  4    EWAIRTTGLTKRFGRRTVVDRIDVAVPRGAVYGFLGPNGSGKTTTIRMLLGLAAPNAGEM  63
            E  IRT  L+K + +   V  ID+ VP+GAVYGFLGPNG+GK+TT++MLLGLA P  G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   WLLGHRMPAAAR-QVLPEVGALVEGPAWYPFLSGTDNLARFDAANPAMRPRD-RQRRIAA  121
             +LG  +    R  +L ++G+L+E+P+ Y  L+G +N++  +      R  D  ++ +  
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQ------RLLDLPKKNVNE  115

Query  122  ALDRVGLSHVAKKKVRAYSLGMKQRLGIAAALLAPRQLLVLDEPTNGLDPQGTREVRALI  181
            AL  V L +  +KKV  YSLGMKQRLGIA A++   +LL+LDEPTNGLDP G  E+R LI
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  182  RSLAED-GTTVFVSSHLLSEVEQICTHVGVMSRGKLVAQGDLTALRRLHRPRLVIETPDV  240
            +SL+E  G TV++SSHLLSE++QI T +G++++G LV Q+ +  L+   ++++ I T +V
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNV  235

255) CLD_1169 in NC_010516


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 98/236 (42%), Positives = 177/236 (75%), Gaps = 3/236 (1%)

Query  19   IKGVSFSVKTGEIFGFLGPNGAGKTTTIRMLVGLIAPTKGHIKIMGHDI-QKDRIAALRN  77
            +K++ + V  G ++GFLGPNGAGK+TT++ML+GL  PT+G+I+I+G ++ +K+RI+ L++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  78   VGCIVENPDMYNDLTGMQNLKFYADLYGDISKERINKVVELVGLKDRINDKVRKYSLGMK  137
            +G ++E+P  Y +LTG++N+ +   L  D++K  +N  + +V L ++ N KV +YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  138  QRLGLGQAILSNPKLLILDEPTNGLDPIGIHEFRDIVKHIAKENNSAVFVSSHILSEIEQ  197
            QRLG++ AI+  PKLLILDEPTNGLDP GI+E+R+++K ++     +V++SSH+LSEI+Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  198  MCDSFAIIDNGIIKTIESVSE-ESSDTERLKISTNEIINIQNVFSKLDFTRIINVG  252
            +  S++II++G +   +S+ E ++ +  ++ I T+++++ Q++++  ++  +I+ G
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDG  254

256) PPE_01211 in NC_014483


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 125/303 (42%), Positives = 200/303 (67%), Gaps = 8/303 (2%)

Query  1    MTYVIRTHQLTKALKGNEIVAGVSMNVRKGETYGFLGPNGAGKTTVMKMITNLLKPTLGE  60
            M  +IRT++L+K  +    V ++ + V +G  YGFLGPNGAGK+T +KM+  L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IELFGEKLTPQS-YHLLGRMGSIIEYPIFYDRLTAQQNLELHCEYMGYYNKQAVRDALEL  119
            I+++G  L  ++   +L  +GS+IE P +Y++LT+ +N+ +    ++   K+ V +AL +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  120  VNLRNADDKPVKDFSLGMKQRLGIARAIATKPELLILDEPINGLDPVGIKEIRQLFHMLC  179
            V L N  +K V ++SLGMKQRLGIA AI   P LLILDEP NGLDP GI EIR+L+  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLVSSHILAEIEQIADTVGVINHGRLIEEVSMEQVRETNTEYIEFTTNDCKKAT  239
              YGMT+L+SSH+L+EI+QIA ++G+INHG L+ + S+ ++++     I + T++   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  YVLSHH--LNLNNIRVLNEQSIRIYDSNVPQKQITKTLILNDIEVDSIHQKSSTLEDYFL  297
             +L+    ++L +   L  ++++  DS+V+  +I   L+ ++I+V  I++   +LED FL
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLK--DSDVA--KINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  RLL  300
             LL
Sbjct  296  ELL  298

257) ycbN in NC_000964


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 122/303 (41%), Positives = 195/303 (65%), Gaps = 8/303 (2%)

Query  1    MTYIVQTNGLTKTYQGKEVVSNVSMHIKKGEIYGFLGPNGAGKTTIMKMLTSLVKPTSGE  60
            M  I++T+ L+K Y+    V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IIILGNKFTHTS-YEVLGNIGSMIEYPIFYENLTAEENLDLHCEYMGYHNKKAIQEVLDM  119
            I ILG+ + + +   +L +IGS+IE P +Y +LT+ EN+ +    ++   KK ++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKI  119

Query  120  VNLKQIDKKPVKTFSLGMKQRLGIARAILTKPDLLILDEPVNGLDPLGIKKIRQLFQVLS  179
            V L +  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI  IR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLISSHLLGEIEQIADTIGVIRDGRLLEEVSMEDVRGQNTEYIELVTPNQTRAC  239
              YGMT+LISSHLL+EI+QIA +IG+I +G L+ + S+ +++ +    I +    +T+  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI----KTKNV  235

Query  240  FVLEKELQLTNFKILNEKTIRIYEA--EASQAAISKALILNDVDIESMNKKYTSLEDYFI  297
               +K L+   +  L +      E   ++  A I+  L+ +++D+  ++    SLED F+
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KLI  300
             L+
Sbjct  296  ELL  298

258) ycbN in NC_020507


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 122/303 (41%), Positives = 195/303 (65%), Gaps = 8/303 (2%)

Query  1    MTYIVQTNGLTKTYQGKEVVSNVSMHIKKGEIYGFLGPNGAGKTTIMKMLTSLVKPTSGE  60
            M  I++T+ L+K Y+    V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IIILGNKFTHTS-YEVLGNIGSMIEYPIFYENLTAEENLDLHCEYMGYHNKKAIQEVLDM  119
            I ILG+ + + +   +L +IGS+IE P +Y +LT+ EN+ +    ++   KK ++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKI  119

Query  120  VNLKQIDKKPVKTFSLGMKQRLGIARAILTKPDLLILDEPVNGLDPLGIKKIRQLFQVLS  179
            V L +  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI  IR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLISSHLLGEIEQIADTIGVIRDGRLLEEVSMEDVRGQNTEYIELVTPNQTRAC  239
              YGMT+LISSHLL+EI+QIA +IG+I +G L+ + S+ +++ +    I +    +T+  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI----KTKNV  235

Query  240  FVLEKELQLTNFKILNEKTIRIYEA--EASQAAISKALILNDVDIESMNKKYTSLEDYFI  297
               +K L+   +  L +      E   ++  A I+  L+ +++D+  ++    SLED F+
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KLI  300
             L+
Sbjct  296  ELL  298

259) A7A1_1942 in NC_019896


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 122/303 (41%), Positives = 195/303 (65%), Gaps = 8/303 (2%)

Query  1    MTYIVQTNGLTKTYQGKEVVSNVSMHIKKGEIYGFLGPNGAGKTTIMKMLTSLVKPTSGE  60
            M  I++T+ L+K Y+    V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IIILGNKFTHTS-YEVLGNIGSMIEYPIFYENLTAEENLDLHCEYMGYHNKKAIQEVLDM  119
            I ILG+ + + +   +L +IGS+IE P +Y +LT+ EN+ +    ++   KK ++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKI  119

Query  120  VNLKQIDKKPVKTFSLGMKQRLGIARAILTKPDLLILDEPVNGLDPLGIKKIRQLFQVLS  179
            V L +  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI  IR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLISSHLLGEIEQIADTIGVIRDGRLLEEVSMEDVRGQNTEYIELVTLNQTRAC  239
              YGMT+LISSHLL+EI+QIA +IG+I +G L+ + S+ +++ +    I +    +T+  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI----KTKNV  235

Query  240  FVLEKELQLTNFKILNEKTIRIYEA--EASQAAISKALILNDVDIESMNKKYTSLEDYFI  297
               +K L+   +  L +      E   ++  A I+  L+ +++D+  ++    SLED F+
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KLI  300
             L+
Sbjct  296  ELL  298

260) ycbN in NC_018520


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 122/303 (41%), Positives = 195/303 (65%), Gaps = 8/303 (2%)

Query  1    MTYIVQTNGLTKTYQGKEVVSNVSMHIKKGEIYGFLGPNGAGKTTIMKMLTSLVKPTSGE  60
            M  I++T+ L+K Y+    V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IIILGNKFTHTS-YEVLGNIGSMIEYPIFYENLTAEENLDLHCEYMGYHNKKAIQEVLDM  119
            I ILG+ + + +   +L +IGS+IE P +Y +LT+ EN+ +    ++   KK ++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKI  119

Query  120  VNLKQIDKKPVKTFSLGMKQRLGIARAILTKPDLLILDEPVNGLDPLGIKKIRQLFQVLS  179
            V L +  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI  IR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLISSHLLGEIEQIADTIGVIRDGRLLEEVSMEDVRGQNTEYIELVTPNQTRAC  239
              YGMT+LISSHLL+EI+QIA +IG+I +G L+ + S+ +++ +    I +    +T+  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI----KTKNV  235

Query  240  FVLEKELQLTNFKILNEKTIRIYEA--EASQAAISKALILNDVDIESMNKKYTSLEDYFI  297
               +K L+   +  L +      E   ++  A I+  L+ +++D+  ++    SLED F+
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KLI  300
             L+
Sbjct  296  ELL  298

261) CcmA in NC_015738


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (657),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 101/222 (46%), Positives = 162/222 (73%), Gaps = 5/222 (2%)

Query  1    MGYVLETRGLVKEFKGQCAVDGVSLHVPEGAVYGLLGPNGAGKSTLLKMVCGMLRPTAGE  60
            M  ++ T+ L KE++    V ++ L+VP+GAVYG+LGPNGAGKST LKM+ G+ +PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILVAGRPWTRSD----LADIGALIETPPLYENLTARENLLVRTTLLGVSEERIDEVLAAV  116
            I + G+     +    L DIG+LIE+P+ Y +LT+ EN+ +   LL+++   ++E L  V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  ELTDTGKKRAGQFSLGMKQRLGIALALVGHPRLLVLDEPTNGLDPVGIQELRALIRSFPA  176
             L +  +K+ +Q+SLGMKQRLGIA+A++  P+LL+LDEPTNGLDP GI+E+R LI+S+P 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  R-GITVVLSSHILGEVEHVADLVGIIVEGRLAYEAPLDGKQD  217
            + G+TV++SSH+L+E++++A  +GII +G L ++ ++   ++
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

262) srtF in NC_020410


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (654),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 107/218 (50%), Positives = 158/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNILETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGILQQTSGE  60
            M  I+ T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHTWKRED----LKSIGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK IGSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGIALALLNRPSLLILDEPTNGLDPMGIQDLREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

263) bcrA in NC_004557


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (657),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 134/303 (45%), Positives = 212/303 (70%), Gaps = 12/303 (3%)

Query  1    MEYVLRTYNLTKTYKnvnvvdnlnlnvKTGDIYGFIGKNGAGKTSTIKMVMGLSKASSGE  60
            ME ++RT  L+K Y+++  V +++L V  G +YGF+G NGAGK++T+KM++GL+K++ G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IELFGDKILNNKCYG---RIGSLIDYPGFYLNLTGEENLEIHRRMMGFTRKNSINKALEM  117
            I+++G  + +++  +    IGSLI+ P++Y +LTG EN+ I +R++++ +KN +N AL +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  118  VGLKNIEDKKVKNFSLGMRQRLGIARALLHHPEFLILDEPTNGLDPIGIKEIRELILDLN  177
            V L N  +KKV ++SLGM+QRLGIA A++  P +LILDEPTNGLDP GI EIRELI  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  178  QKFGITVLISSHILSEIQLLVTKIGIIHKGRLIEEISYDELKKRNRHYIQLKVDNDKKAS  237
            +K+G+TVLISSH+LSEI+ + T IGII+ G L+ + S  EL +R +  I +K     K  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT----KNV  235

Query  238  FILEKKLDIRDYVVW-EDGIIRIYEKL--NVVGNINKILVSNDVRVDEIYINLDNLEDYF  294
               +K L+ ++Y+   +DG + I E+L  + V++IN +LV +++ V  I  +  +LED F
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTI-ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

Query  295  IRL  297
            + L
Sbjct  295  LEL  297

264) bcrA5 in NC_017542


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (657),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 125/303 (42%), Positives = 198/303 (66%), Gaps = 8/303 (2%)

Query  1    MTYILRTHQLTKAMKGNEIVAGVSMNVRKGETYGFLGPNGAGKTTVMKMITNLLKPTLGE  60
            M  I+RT++L+K  +    V ++ + V +G  YGFLGPNGAGK+T +KM+  L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IELFGEKLTPQS-YHLLGRMGSIIEYPIFYERLTAQQNLELHCEYMGYYNKQAVRDALEL  119
            I+++G  L  ++   +L  +GS+IE P +Y +LT+ +N+ +    ++   K+ V +AL +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  120  VNLRNADDKPVKDFSLGMKQRLGIARAIATKPELLILDEPINGLDPVGIKEIRQLFHMLC  179
            V L N  +K V ++SLGMKQRLGIA AI   P LLILDEP NGLDP GI EIR+L+  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLVSSHLLAEIEQIADTIGVINHGRLIEEVSMEQVRDTNTEYIEFTTNDCKKAA  239
              YGMT+L+SSHLL+EI+QIA +IG+INHG L+ + S+ ++++     I + T++   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  YILSHQ--LSLNNIRVLNEQSIRIYDLSVPQKQITKTLILNDVEVDSIHQKSSTLEDYFL  297
             +L+ +  +SL +   L  ++++  D++    +I   L+ ++++V  I++   +LED FL
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLKDSDVA----KINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  RLL  300
             LL
Sbjct  296  ELL  298

265) PPSC2_c1300 in NC_014622


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (657),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 125/303 (42%), Positives = 198/303 (66%), Gaps = 8/303 (2%)

Query  1    MTYILRTHQLTKAMKGNEIVAGVSMNVRKGETYGFLGPNGAGKTTVMKMITNLLKPTLGE  60
            M  I+RT++L+K  +    V ++ + V +G  YGFLGPNGAGK+T +KM+  L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IELFGEKLTPQS-YHLLGRMGSIIEYPIFYERLTAQQNLELHCEYMGYYNKQAVRDALEL  119
            I+++G  L  ++   +L  +GS+IE P +Y +LT+ +N+ +    ++   K+ V +AL +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  120  VNLRNADDKPVKDFSLGMKQRLGIARAIATKPELLILDEPINGLDPVGIKEIRQLFHMLC  179
            V L N  +K V ++SLGMKQRLGIA AI   P LLILDEP NGLDP GI EIR+L+  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLVSSHLLAEIEQIADTIGVINHGRLIEEVSMEQVRDTNTEYIEFTTNDCKKAA  239
              YGMT+L+SSHLL+EI+QIA +IG+INHG L+ + S+ ++++     I + T++   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  YILSHQ--LSLNNIRVLNEQSIRIYDLSVPQKQITKTLILNDVEVDSIHQKSSTLEDYFL  297
             +L+ +  +SL +   L  ++++  D++    +I   L+ ++++V  I++   +LED FL
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLKDSDVA----KINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  RLL  300
             LL
Sbjct  296  ELL  298

266) BATR1942_19935 in NC_014639


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (657),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 124/303 (41%), Positives = 192/303 (64%), Gaps = 8/303 (2%)

Query  1    MTYTVNINGLTKTFQGKEVVSNVNMHIRKGEIYGFLGPNGAGKTTVMKMLTSLVKPTGGE  60
            M   +  + L+K ++    V ++++++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IEILGHKLTNTS-YKVLGRIGSMIEYPIFYEKLTAQENLELHCEYMGYHDKNSIQEVLGM  119
            I+ILG  L + +   +L  IGS+IE P +Y  LT+ EN+ +    ++   K++++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKI  119

Query  120  VNLKNIEDKAVKTFSLGMKQRLGIARAIITKPELLILDEPINGLDPVGIKEIRHLFQVLS  179
            V L N  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI EIR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTLLISSHMLSEIEQIADTIGVIRDGRLLEEVSMDKIRGQNTEYIELVTTNRTKAC  239
              YGMT+LISSH+LSEI+QIA +IG+I +G L+ + S+  ++ +    I +    +TK  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI----KTKNV  235

Query  240  FVLENELGITNFKILNEKTVRIYDS--DASQAAISKALILNDIDIESINKKYTSLEDYFL  297
               ++ L    +  L +      ++  D+  A I+  L+ ++ID+  I+    SLED FL
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  SLI  300
             L+
Sbjct  296  ELL  298

267) B938_15885 in NC_019842


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (654),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 107/218 (50%), Positives = 157/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNIIETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGMLQQTSGE  60
            M  II T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHTWKRED----LKSIGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK IGSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGIALALLNRPSLLILDEPTNGLDPMGIQDLRGFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++R +I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

268) GYMC10_3489 in NC_013406


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (656),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 109/244 (45%), Positives = 176/244 (73%), Gaps = 2/244 (0%)

Query  1    MNYVIQTSDLSKTVKGMSIVSSVNLNVRKGEIYGLLGPNGAGKTTIMKMLTGLILPTSGA  60
            M+ +I+T  LSK  + +  V  ++L V +G +YG+LGPNGAGK+T +KML GL  PT G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IMLFGKNFSETSKEG-LKRVGSIIEYPIFFEHMTAIENLQIHCEYLGYYDKRAIRQALDL  119
            I ++GK+++E ++ + LK +GS+IE P ++ H+T++EN+ I    L+   K+ + +AL +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  120  VQLEGIEDKKVKDFSLGMKQRLGIARAAITKPELIVLDEPTNGLDPIGIKNMRDLIRTLN  179
            V+LE   +KKV ++SLGMKQRLGIA A +  P L++LDEPTNGLDP GI ++R+LI++L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  QEYGITFVLSSHILGEIEQVADRIGVIQRGQLVDEVTLSDIRKQRTDYIELMTSNVQKAA  239
            + YG+T ++SSH+L+EI+Q+A  IG+I++G+LV + ++ +++++    I + T NV  A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  FLLE  243
             LL+
Sbjct  240  KLLN  243

269) B737_6484 in NC_022116


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (656),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 97/229 (43%), Positives = 164/229 (72%), Gaps = 2/229 (0%)

Query  1    MTIDAIDLTKQYRDVLAVDDVTLRVAPGEIYALLGLNGAGKTTTIRMLLGLLRPTHGQVR  60
            M I +  L+K+Y  ++ V D+ LRV+ G +Y++LG NGAGK+TT++MLLGL +PT+G++ 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   LFGEQV-EPGRNAVWAQVGYLVETPSAYPELTVTENLQVIARLRGLRNEKTVTDAIARLG  119
            ++G ++ E  R ++  ++G L+E+PS Y +LT  EN+ ++ RL +L + K V +A+  + 
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKIVR  121

Query  120  LQPHAHHRAQTLSLGNKQRLGLAKALLHQPELLILDEPANGLDPAGVAEIRTLLHDLAHH  179
            L+ + + +    SLG KQRLG+A A++  P LLILDEP+NGLDPAG+ EIR L+  L++ 
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  180  DGVTILLSSHILTEVARLADRIGVLDHGRLAWEGSTADLTAQARPQLRI  228
             G+T+L+SSH+L+E+ ++A  IG+++HG L  ++S  +L  ++++Q+ I
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI  230

270) RAM_33770 in NC_017186


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (656),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 97/229 (43%), Positives = 164/229 (72%), Gaps = 2/229 (0%)

Query  1    MTIDAIDLTKQYRDVLAVDDVTLRVAPGEIYALLGLNGAGKTTTIRMLLGLLRPTHGQVR  60
            M I +  L+K+Y  ++ V D+ LRV+ G +Y++LG NGAGK+TT++MLLGL +PT+G++ 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   LFGEQV-EPGRNAVWAQVGYLVETPSAYPELTVTENLQVIARLRGLRNEKTVTDAIARLG  119
            ++G ++ E  R ++  ++G L+E+PS Y +LT  EN+ ++ RL +L + K V +A+  + 
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKIVR  121

Query  120  LQPHAHHRAQTLSLGNKQRLGLAKALLHQPELLILDEPANGLDPAGVAEIRTLLHDLAHH  179
            L+ + + +    SLG KQRLG+A A++  P LLILDEP+NGLDPAG+ EIR L+  L++ 
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  180  DGVTILLSSHILTEVARLADRIGVLDHGRLAWEGSTADLTAQARPQLRI  228
             G+T+L+SSH+L+E+ ++A  IG+++HG L  ++S  +L  ++++Q+ I
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI  230

271) AMES_6484 in NC_018266


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (656),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 97/229 (43%), Positives = 164/229 (72%), Gaps = 2/229 (0%)

Query  1    MTIDAIDLTKQYRDVLAVDDVTLRVAPGEIYALLGLNGAGKTTTIRMLLGLLRPTHGQVR  60
            M I +  L+K+Y  ++ V D+ LRV+ G +Y++LG NGAGK+TT++MLLGL +PT+G++ 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   LFGEQV-EPGRNAVWAQVGYLVETPSAYPELTVTENLQVIARLRGLRNEKTVTDAIARLG  119
            ++G ++ E  R ++  ++G L+E+PS Y +LT  EN+ ++ RL +L + K V +A+  + 
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKIVR  121

Query  120  LQPHAHHRAQTLSLGNKQRLGLAKALLHQPELLILDEPANGLDPAGVAEIRTLLHDLAHH  179
            L+ + + +    SLG KQRLG+A A++  P LLILDEP+NGLDPAG+ EIR L+  L++ 
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  180  DGVTILLSSHILTEVARLADRIGVLDHGRLAWEGSTADLTAQARPQLRI  228
             G+T+L+SSH+L+E+ ++A  IG+++HG L  ++S  +L  ++++Q+ I
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI  230

272) AMED_6582 in NC_014318


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (656),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 97/229 (43%), Positives = 164/229 (72%), Gaps = 2/229 (0%)

Query  1    MTIDAIDLTKQYRDVLAVDDVTLRVAPGEIYALLGLNGAGKTTTIRMLLGLLRPTHGQVR  60
            M I +  L+K+Y  ++ V D+ LRV+ G +Y++LG NGAGK+TT++MLLGL +PT+G++ 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   LFGEQV-EPGRNAVWAQVGYLVETPSAYPELTVTENLQVIARLRGLRNEKTVTDAIARLG  119
            ++G ++ E  R ++  ++G L+E+PS Y +LT  EN+ ++ RL +L + K V +A+  + 
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKIVR  121

Query  120  LQPHAHHRAQTLSLGNKQRLGLAKALLHQPELLILDEPANGLDPAGVAEIRTLLHDLAHH  179
            L+ + + +    SLG KQRLG+A A++  P LLILDEP+NGLDPAG+ EIR L+  L++ 
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  180  DGVTILLSSHILTEVARLADRIGVLDHGRLAWEGSTADLTAQARPQLRI  228
             G+T+L+SSH+L+E+ ++A  IG+++HG L  ++S  +L  ++++Q+ I
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI  230

273) Ethha_0602 in NC_014828


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (656),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 121/300 (41%), Positives = 200/300 (67%), Gaps = 16/300 (5%)

Query  8    TKNLRKDIGSKTIVSDINLNIHTGEVFGFLGPNGAGKTTTIRMIVGLSRITQGDIFINGH  67
            T+ L K+      V DI+L +  G V+GFLGPNGAGK+TT++M++GL++ TQG+I I G 
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  68   SVRTAFR-EAMCDVGCIVENPELYKYMSGLDNLRMFARLYAGITQARIDEVVKLVHLEDA  126
             +    R   + D+G ++E+P  Y  ++GL+N+ +  RL  ++ +  ++E +K+V+LE+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQ  125

Query  127  IRGKVKTYSLGMRQRLGIAQALLHRPRLLILDEPTNGLDPAGIREMRGLFRSLAEQ-GTT  185
               KV  YSLGM+QRLGIA A++  P+LLILDEPTNGLDPAGI E+R L++SL+E+ G T
Sbjct  126  KNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMT  185

Query  186  VFVSSHILAEMQQMCDRVGIIHHGRMVTVKTVDELVDMSHSGGVQLLVRTGD---NGKAL  242
            V++SSH+L+E++Q+   +GII+HG +V   ++ EL + ++S   Q+ ++T +     K L
Sbjct  186  VLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQS---QIAIKTKNVVSAQKLL  242

Query  243  ACITELN-IQAG-MEKDGVRVSTEPARVPEIVRALVGAQIDVFALDTQEAHSLEDVFIKL  300
                 ++ IQ G +  + ++  ++ A++  +   LV ++IDVF ++ +   SLED+F+ L
Sbjct  243  NTKGYMSLIQDGYLTIENLK-DSDVAKINGM---LVHSNIDVFRIEEHK-KSLEDIFLEL  297

274) MS7_0057 in NC_017351


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (654),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 131/304 (44%), Positives = 209/304 (69%), Gaps = 10/304 (3%)

Query  1    MNNIIEINNLTKQYGSQIAVNNLSITVESGQIYGFLGRNGAGKTTTIRMLLGLIKPTKGN  60
            M+ II  + L+K+Y   + V+++ + V  G +YGFLG NGAGK+TT++MLLGL KPT+GN
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IKIFEKEF-ESNKTEILKNIGAMVETPGFYSNLTAKENLTINAKILGIQKENAIEEVLEI  119
            I+I+ KE+ E N+  ILK+IG+++E+P++Y++LT+ EN+TI  ++L++ K N ++E L I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGLASEKVKLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIKEIRKLIKDLA  179
            V L ++K K   +YSLGMKQRLGIA A++  P LLILDEPTNGLDP GI EIR LIK L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  QSRNitilisshilseieqlVDKVGIIHNGVLLEEIMYEDLKKKNRQFISISVSDEEKVA  239
            +   +T+LISSH+LSEI+Q+   +GII++G L+ +    +L ++ +  I+I   +     
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  CLLETNFGIYDYKIKENGEFKIYSHIDRQQEINR---LLVLNNIDVFQMRVIEDNLETYF  296
             LL+T+    +Y    ++ +    ++ ++ ++ +   +LV +NIDVF++     +LE  F
Sbjct  240  KLLNTK----GYMSLIQDGYLTIENL-KDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

Query  297  EDLV  300
             +L+
Sbjct  295  LELL  298

275) USA300HOU_pUSA300HOUMR0024 in NC_010063


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (654),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 131/304 (44%), Positives = 209/304 (69%), Gaps = 10/304 (3%)

Query  1    MNNIIEINNLTKQYGSQIAVNNLSITVESGQIYGFLGRNGAGKTTTIRMLLGLIKPTKGN  60
            M+ II  + L+K+Y   + V+++ + V  G +YGFLG NGAGK+TT++MLLGL KPT+GN
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IKIFEKEF-ESNKTEILKNIGAMVETPGFYSNLTAKENLTINAKILGIQKENAIEEVLEI  119
            I+I+ KE+ E N+  ILK+IG+++E+P++Y++LT+ EN+TI  ++L++ K N ++E L I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGLASEKVKLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIKEIRKLIKDLA  179
            V L ++K K   +YSLGMKQRLGIA A++  P LLILDEPTNGLDP GI EIR LIK L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  QSRNitilisshilseieqlVDKVGIIHNGVLLEEIMYEDLKKKNRQFISISVSDEEKVA  239
            +   +T+LISSH+LSEI+Q+   +GII++G L+ +    +L ++ +  I+I   +     
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  CLLETNFGIYDYKIKENGEFKIYSHIDRQQEINR---LLVLNNIDVFQMRVIEDNLETYF  296
             LL+T+    +Y    ++ +    ++ ++ ++ +   +LV +NIDVF++     +LE  F
Sbjct  240  KLLNTK----GYMSLIQDGYLTIENL-KDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

Query  297  EDLV  300
             +L+
Sbjct  295  LELL  298

276) ELI_2278 in NC_014624


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  177 bits (654),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 125/296 (43%), Positives = 199/296 (68%), Gaps = 4/296 (1%)

Query  3    ELIIQTKDLTKIYGEQTVVDRVNIHIRQGKIYGLLGRNGAGKTTIMKMMMGLTRITKGEI  62
            E+II+T+ L+K Y     V  +++++ QG +YG+LG NGAGK+T +KM++GL++ T+G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   EIFGQRVETHQK-DIYPRIGAIIEAPGFYPNLTGAENLNVFARLRGTVSLDAVNEALELV  121
            +I+G+ ++  ++  I   IG++IE+P++Y +LTG EN+ +  RL + ++   VNEAL +V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIV  120

Query  122  GLPYNDKKLFSKYSLGMKQRLGIANAIIHDPELLILDEPTNGLDPIGIAEIRKFIRFLSE  181
             L  + +K  S+YSLGMKQRLGIA AI+  P LLILDEPTNGLDP GI EIR +I+ L+E
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  182  ERGKTILISSHILSEIALLADDIGILHNGVLLEESSLATLQKKNECYIAFRVSSTAKAAR  241
              G T+LISSH+LSEI  +A  IGI+++G L+ + S+  L+++ +  IA++  +   A +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  242  VLEEFFGITCYVIENDHNMRVLDTSMDIAEINKDFIMNEIAVSRSDLCEETLEDYF  297
            +L+   G    + +    +  L  S D+A IN  ++ ++I V R +    +LED F
Sbjct  241  LLNT-KGYMSLIQDGYLTIENLKDS-DVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

277) lwe0717 in NC_008555


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  176 bits (652),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDASIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSSPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLN-SREQLRWRATPFEQAKAFLESVTEVE-VDGEYVVTA--MNEH  262
            + +G ++  D + +L N ++ Q+  ++     A+ +L++   +  +++ Y+      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEKLVSKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

278) VAB18032_21160 in NC_015434


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  176 bits (652),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 118/294 (41%), Positives = 187/294 (64%), Gaps = 11/294 (3%)

Query  10   HEVSKRYPGGVTAVDGLSLRVREGEVLGFLGPNGAGKTTTMRMLVGLVRPSAGRIQVLGQ  69
            + +SK Y   +  V ++ LRV +G V GFLGPNGAGK+TT++ML+GL +P+ G I++LG+
Sbjct  8    QRLSKEY-NKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  70   PPGRQ-----LARIGALIESPTFYPHLSGRDNLRLAARYAGVPDAAADRVLDEVGLTARA  124
                +     L  IG+LIESP++Y HL+G +N+ +  R  ++P    +  L  V L  + 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  125  SSPFRTYSLGMKQRLGVAAALLKEPALLILDEPTNGLDPAGVAEMRELLRSLGQG-GRTV  183
            +     YSLGMKQRLG+A A++K P LLILDEPTNGLDPAG+ E+REL++SL +  G TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  184  LLSSHVLGEVEQVCDRIAVIDRGRLIAEGTPDELRDALGTGVLLIDADPADEAIACLGAD  243
            L+SSH+L+E++Q+   I++I++G L+ +++  EL++  G + + I +     A   L + 
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR-GQSQIAIKTKNVVSAQKLLNTK  245

Query  244  DRVRAVEQVDGTLRVST-DPALAGALNRRLVTAGVDVRELRPLRHSLEEAFLEL  296
            + +  ++  DG L +     +  + +N  LV + +DV  +   + SLE+ FLEL
Sbjct  246  GYMSLIQ--DGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

279) spaF in NC_009725


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  176 bits (653),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 107/218 (50%), Positives = 158/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNILETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGILQQTSGE  60
            M  I+ T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHTWKRED----LKSIGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK IGSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGIALALLNRPSLLILDEPTNGLDPMGIQDLREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

280) SMUGS5_02880 in NC_018089


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  176 bits (652),  Expect = 6e-46, Method: Compositional matrix adjust.
 Identities = 107/216 (50%), Positives = 162/216 (75%), Gaps = 5/216 (2%)

Query  5    MLETKNLTKQFGKQTAVNQLNLKVERRSIYGLLGPNGSGKSTTLKMITGMLRKTSGHILI  64
            ++ T+ L+K++ K   V++++L+V + ++YG+LGPNG+GKSTTLKM+ G+ + T G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   DGHDWGRKD----LENIGALIESPPLYENLTARENLKVRTLMLSLPDSRIDEVLKIVDLT  120
             G +   K+    L +IG+LIESP+ Y +LT+ EN+ +   +L LP   ++E LKIV L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKRAGQFSMGMKQRLGIAIALLNSPQLLILDEPTNGLDPIGIQKLRELILSFPTQ-G  179
            N  +K+ +Q+S+GMKQRLGIA+A+++ P+LLILDEPTNGLDP GI+ +RELI S+P + G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVIISSHILSEIQMTADHIGIISNGVLGYQEKIHQ  215
            +TV+ISSH+LSEI+  A  IGII++G L +Q+ I +
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKE  219

281) GWCH70_0243 in NC_012793


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  176 bits (651),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 120/214 (57%), Positives = 166/214 (78%), Gaps = 5/214 (2%)

Query  5    ILQTNKLSKSFGKQLAVDNVSLKVKTNTIYGLLGPNGAgksttlklltgllHPTSGEIIF  64
            I++T++LSK + K + V ++ L+V   ++YG+LGPNGAGKSTTLK+L GL  PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   NGHPWSRKD----LKDIGVLIESPALYGNLTAYENLLVHTKVLHLPESRIQEVLKIVGLE  120
             G   + K+    LKDIG LIESP+ YG+LT+ EN+ +  ++L+LP   ++E LKIV LE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKKVSQFSFGMKQRLGIAKALLNHPKLLILDEPTNGLDPLGIQELRKLIRSFPSQ-G  179
            N  +KKVSQ+S+GMKQRLGIA A+++ PKLLILDEPTNGLDP GI+E+R LI+S+P + G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  MTVILSSHILSEVAQLADHIGIIHHGKLKYQGEI  213
            MTV++SSH+LSE+ Q+A  IGII+HG L +Q+ I
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

282) spaF in NC_017190


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  176 bits (651),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 106/217 (49%), Positives = 157/217 (73%), Gaps = 5/217 (2%)

Query  1    MSNILETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGILRQTSGE  60
            M  I+ T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHPWKRED----LKKTGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK  GSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGIALALVNRPSLLILDEPTNGLDPMGIQDLREFIRSLPA  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  R-GMTVILSSHLLSEVEQIADHIGIISDGILGYQGEI  212
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

283) Awo_c01530 in NC_016894


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  176 bits (650),  Expect = 9e-46, Method: Compositional matrix adjust.
 Identities = 105/212 (50%), Positives = 162/212 (77%), Gaps = 5/212 (2%)

Query  6    ILQTKNLSKTFKNHHAVNEVSIAISRNSIYGLLGPNGAGKSTLLKMITGMLHPSSGEI-I  64
            I++T+ LSK +++   V+++ + +++ ++YG+LGPNGAGKST LKM+ G+  P+ G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FEDHLWSRND---LVDIGALIESAPLYENLTAIENLKVRTLLLGLPDTRIDEVLQTVDLT  121
            +  +L  +N    L DIG+LIES++ Y +LT++EN+ +   LL+LP   ++E L+ V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  122  NTGKKCAGQFSMGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQDLRALIRSFPEQ-G  180
            N  +K  +Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+++R LI+S+PE+ G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  181  ITVILSSHLLSEVEMIADHIGIISNGILGYQA  212
            +TV++SSHLLSE++ IA  IGII++G L +Q 
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQD  215

284) Tter_1669 in NC_013525


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  176 bits (653),  Expect = 9e-46, Method: Compositional matrix adjust.
 Identities = 134/300 (45%), Positives = 206/300 (69%), Gaps = 10/300 (3%)

Query  1    MEYVIETNNLTKIYNNKIKAVENLNLRVRAGEIYGFLGPNgagktttlkmllglikPTSG  60
            ME +I T+ L+K YN+ ++ V +++LRV  G +YGFLGPNGAGK+TTLKMLLGL KPT G
Sbjct  1    MEMIIRTQRLSKEYNKIFR-VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQG  59

Query  61   SARILGKVPGTPDSLSLL---GSLVESPAFYPYLSGRDNLRVIADYSGAPRSRIDEVLDI  117
            +  ILGK     + +S+L   GSL+ESP++Y  L+G +N+ ++    + P+  ++E L I
Sbjct  60   NINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKI  119

Query  118  VGLKDRANDKFKGYSLGMKQRLGVAATLLKDPQILILDEPTNGLDPKGMAEMRELIRNLG  177
            V L ++ N K   YSLGMKQRLG+A +++K P++LILDEPTNGLDP G+ E+RELI++L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  178  QG-NRTVLLSSHLLNEVEQICDRVGVIQQGRLIAEGTISEL--KGSGALLVRATPSDLAL  234
            +    TVL+SSHLL+E++QI   +G+I++G L+ +++I EL  +G + + +++     A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  235  SMLRSLDYVEKIEERDGALLIST-DPSMAAEINRLLVQSGVAVSELHPTSQSLEEVFLNL  293
             +L + +Y+  I+  DG L I     S  A IN +LV+S + V  ++   +SLE++FL+L
Sbjct  240  KLLNTKGYMSLIQ--DGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

285) spaF in NC_014551


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  175 bits (649),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 107/218 (50%), Positives = 158/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNILETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGILQQTSGE  60
            M  I+ T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHPWKRED----LKKIGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK IGSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGIALALVNRPSLLILDEPTNGLDPMGIQDMREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGILGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

286) spaF in NC_017188


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 106/218 (49%), Positives = 157/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNILETRQLQKSFGRQQAVADVSLSVKHNSIYGLLGPNGAGKSTTLKILTGILRQTSGE  60
            M  I+ T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHPWKRED----LKKTGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK  GSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGIGKKRAGQFSMGMKQRLGIALALVNRPSLLILDEPTNGLDPMGIQDLREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGILGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

287) spaF in NC_017191


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 106/218 (49%), Positives = 157/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNILETRQLQKSFGRQQAVADVSLSVKHNSIYGLLGPNGAGKSTTLKILTGILRQTSGE  60
            M  I+ T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHPWKRED----LKKTGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G   +  +    LK  GSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGIGKKRAGQFSMGMKQRLGIALALVNRPSLLILDEPTNGLDPMGIQDLREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A+++ P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGILGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

288) lse_0652 in NC_013891


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  175 bits (649),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 188/272 (70%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGEDI-QKNFTEAMRSLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I G ++ +KN    ++ +GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYGFLTGQENLAYFARMDPSIKKERILEVTALVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +YG LTG EN++   R+   + K  + E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTEGTIIKTDQVAHLLS-SREQLRWRVTPFEQAKTFLESVTEVE-VDGAYL-VTSMNDNS  263
            + +G ++  D + +L + ++ Q+  +      A+ +L++   +  ++++YL + +++D+ 
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  264  AEW-NEQLVAQGIKVHEIDKRKPSLEDLFLEL  294
                N  LV   I V  I+ +K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

289) bcrA in NC_004557


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  175 bits (646),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 115/285 (41%), Positives = 197/285 (70%), Gaps = 11/285 (3%)

Query  19   IRSISFNIKEGEIFGFLGPNGAGKTTTIRMLTGLIHPNEGKIKIMGYDLK-KEREKALSY  77
            ++ I + + +G ++GFLGPNGAGK+TT++ML GL  P +G+I+I+G +L+ K+R   L  
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  78   VGAVIENPELYNYLSGRENLMQICRIRKIPKNKLEEVIHLVKLENRINQKVKKYSLGMKQ  137
            +G++IE+P  Y  L+G EN+  + R+  +PK++++E + +V+LEN+ N+KV +YSLGMKQ
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQ  139

Query  138  RLGLAAALLSNPKLLILDEPTNGLDPNGMLEFRDIIRSVTKEYKTSVFVSSHILSEIEQI  197
            RLG+A A++  PKLLILDEPTNGLDP G+ E+R++I+S+   Y  +V++SSH+LSEI+QI
Sbjct  140  RLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQI  199

Query  198  CSKVAFINKGILQSIESIDTMEDVVEKENFIIIPKDINFAKALLAN---IDPIHH-YKII  253
             + +++IN G L   +SI  +++  + + + I  K++  A+ LL     +  I++ Y  I
Sbjct  200  ATSIGIINHGELVFQDSIKELHNRGQSQ-IAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  254  DNKIHVEIDKNSSHRVIKELVQLNVDIKEVYREHKILEERYMELM  298
            +N  + ++ K ++      LV+ N+D+  +  + K LE+ ++EL+
Sbjct  259  ENLKDSDVAKINGM-----LVHSNIDVFRIEEHKKSLEDIFLELL  298

290) CLL_A2211 in NC_010674


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  174 bits (645),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 110/213 (52%), Positives = 162/213 (77%), Gaps = 5/213 (2%)

Query  3    DIILETKNLSKTFKKQEAVKEVSIKVEKNSIYGLLGPNGAGKSTILKMITGMIKPSFGEI  62
            ++I+ T+ LSK ++K   VK++ ++V + ++YG+LGPNGAGKST LKM+ G+ KP+ G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   LFNDHKWSRND----LKLIGSLIESAPLYENLSARENLKVRTTVLGLPDSRIDEVLDIVD  118
             + +   + ++    LK IGSLIES++ Y +L++ EN+ +   +L+LP   ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LKNTGKKKSGQFSMGMKQRLGIAIALLNNPKLLILDEPTNGLDPFGIQELRELIKSFPKK  178
            L N  +KK +Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELIKS+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVEQIADHIGIICGGVLGYQ  210
             G+TV++SSH+LSE++QIA  IGII  G L +Q
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQ  214

291) Spico_1203 in NC_015436


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  174 bits (645),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 97/212 (46%), Positives = 154/212 (73%), Gaps = 1/212 (0%)

Query  1    MTHIVSIRNLTKAFGTHEVIRNCTISVNEGEIYGFLGANGAGKTTVLKLIAGLLNPTSGR  60
            M  I+  + L+K +     +++  + V +G +YGFLG+NGAGK+T LK++ GL +PT G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IEVCGME-HPGNREAILRNIGSLIEVPAFYEHLSATENLEIHLAYMGIQKADIEGTLNRV  119
            I++ G E +  NR +IL++IGSLIE P++Y HL++ EN+ I    +++ K +++ +L+ V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  120  GLPGTSAQPVSQFSLGMRQRLGIARTIIHKPRLLLLDEPINGLDPMGIRDMRELFSSLAH  179
             L     + VSQ+SLGM+QRLGIA +I+  P+LL+LDEP NGLDP GI ++REL+ SL++
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  180  EDGMTLMISSHILGEIEHIANTVGVIVDGAVV  211
              GMT++ISSH+L+EI++IA ++G+I +G +V
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELV  212

292) Geoth_3656 in NC_015660


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  174 bits (645),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 120/214 (57%), Positives = 166/214 (78%), Gaps = 5/214 (2%)

Query  26   ILQTNKLSKSFGKQLAVDNVSLKVKTNTIYGLLGPNGAgksttlklltglFHPTSGEIIF  85
            I++T++LSK + K + V ++ L+V   ++YG+LGPNGAGKSTTLK+L GL  PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  86   NGHPWSRKD----LKDIGVLIESPALYGNLTAYENLLVHTKVLHLPESRIQEVLKIVGLE  141
             G   + K+    LKDIG LIESP+ YG+LT+ EN+ +  ++L+LP   ++E LKIV LE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  142  NTGKKKVSQFSFGMKQRLGIAKALLNHPKLLILDEPTNGLDPLGIQELRKLIRSFPSQ-G  200
            N  +KKVSQ+S+GMKQRLGIA A+++ PKLLILDEPTNGLDP GI+E+R LI+S+P + G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  201  MTVILSSHILSEVAQLADHIGIIHHGKLKYQGEI  234
            MTV++SSH+LSE+ Q+A  IGII+HG L +Q+ I
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

293) GY4MC1_3547 in NC_014650


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  174 bits (645),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 120/214 (57%), Positives = 166/214 (78%), Gaps = 5/214 (2%)

Query  26   ILQTNKLSKSFGKQLAVDNVSLKVKTNTIYGLLGPNGAgksttlklltglFHPTSGEIIF  85
            I++T++LSK + K + V ++ L+V   ++YG+LGPNGAGKSTTLK+L GL  PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  86   NGHPWSRKD----LKDIGVLIESPALYGNLTAYENLLVHTKVLHLPESRIQEVLKIVGLE  141
             G   + K+    LKDIG LIESP+ YG+LT+ EN+ +  ++L+LP   ++E LKIV LE
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  142  NTGKKKVSQFSFGMKQRLGIAKALLNHPKLLILDEPTNGLDPLGIQELRKLIRSFPSQ-G  200
            N  +KKVSQ+S+GMKQRLGIA A+++ PKLLILDEPTNGLDP GI+E+R LI+S+P + G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  201  MTVILSSHILSEVAQLADHIGIIHHGKLKYQGEI  234
            MTV++SSH+LSE+ Q+A  IGII+HG L +Q+ I
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

294) LMOG_01979 in NC_017545


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  174 bits (644),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 188/272 (70%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYSFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y+ LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPMEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +  +  A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

295) HD73_5813 in NC_020238


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  174 bits (644),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 122/299 (41%), Positives = 192/299 (65%), Gaps = 3/299 (1%)

Query  1    MTTILSVRDLKKVIGKKTLVENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGT  60
            M  I+  + L K   K   V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DMLEAAKEVREVSVEGDRLLCRMDIASISSWNKHFVENEIDVHSVKELVFTLEDLFIEL  298
             +L+ +K    +  +G   +  +  + ++  N  +V+++IDV  + E   +LED+F+EL
Sbjct  240  KLLN-TKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

296) CLOST_2472 in NC_014614


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  174 bits (643),  Expect = 5e-45, Method: Compositional matrix adjust.
 Identities = 130/305 (43%), Positives = 204/305 (67%), Gaps = 12/305 (3%)

Query  1    MENIIETYNLTKKYKGCDVVNSINLNVPKGKIYGLLGRNGAGKTTAMKMLIQMVKPTSGS  60
            ME II T  L+K Y+    V+ I+L VP+G +YG+LG NGAGK+T++KML+ + KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   FSLFG-EKNVKNNASVYKNIGSIIETPSFYTNLTAYENLRILN-LLRGERKSSHIMRSLE  118
            ++++G E N KN  S+ K+IGS+IE+PS+Y +LT+ EN+ I++ LL   +K  ++  +L 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKK--NVNEALK  118

Query  119  IVGLDKEKTKPFAQYSLGMKQRLGIIAAAIMHEPKLLILDEPINGLDPIGILEIRSFLSE  178
            IV L+++K K  +QYSLGMKQRLGI A AIM  PKLLILDEP NGLDP GI EIR ++  
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGI-AMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  179  LSKKNDTTILISSHVLNEIEQIADIIGVMHEGKLIKELEMAKLNKCKRKYTEFAVSNTKL  238
            L+ K + T+LISSH+L+EI+QIA  IG++++G L+ +  +  L++  +    +   N   
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVS  237

Query  239  ASKFLQER-YHIKNLDIVENTIMIADC--THDTGEINKAFVESGLLVTQVHSYEESLENY  295
            A K+L+ + Y    + ++++  +  +     D + IN  +V+S + V +++    SLE+ 
Sbjct  238  AQKLLNTKGY----MSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDI  293

Query  296  FSNLI  300
            F +L+
Sbjct  294  FLELL  298

297) lin0750 in NC_003212


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  174 bits (644),  Expect = 5e-45, Method: Compositional matrix adjust.
 Identities = 115/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VRPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDPSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSSPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLASVTEVE-VDGEYL-VTAVNERS  263
            + +G ++  D + +L + +++Q+   +     A+ +L +   +  +++ YL +  +++  
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  264  AEW-NEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
                N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

298) LMOATCC19117_0780 in NC_018584


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (640),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 117/272 (44%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSAIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+    KK+ ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALAKNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

299) LM220_18390 in NC_021830


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (640),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 117/272 (44%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSAIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+    KK+ ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALAKNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

300) MUO_04060 in NC_017728


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

301) Lm4b_00772 in NC_012488


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

302) LM1816_00680 in NC_021829


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

303) LMOL312_0756 in NC_018642


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

304) LMOSLCC2755_0757 in NC_018587


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

305) LMOSLCC2482_0800 in NC_018591


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

306) M640_02685 in NC_021839


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

307) M644_12250 in NC_021827


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

308) M645_03215 in NC_021840


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

309) M643_14080 in NC_021826


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

310) M641_10060 in NC_021838


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 116/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

311) BAST_1589 in NC_018720


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (640),  Expect = 5e-45, Method: Compositional matrix adjust.
 Identities = 108/220 (50%), Positives = 160/220 (73%), Gaps = 9/220 (4%)

Query  4    ILRTEGLTKVFGHGQRAVDQVSLHVPEGGVYGLLGPNGAGKSTTLKMVTGMLHPTGGSMI  63
            I+RT+ L+K +    R V ++ L+VP+G+VYG+LGPNGAGKSTTLKM+ G+  PT G++ 
Sbjct  4    IIRTQRLSKEYNKIFR-VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  64   LDGHPWSRRD----LYDIGALIEQPPVYPNLTARQNLKVRTTLFGLPDERIDQVLSIAGL  119
            + G   + ++    L DIG+LIE P+ Y +LT+ +N+ +   L++LP   +++ L I  L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  120  TDTGSKKAGQFSLGMKQRLGIANAILTKPRLLILDEPTNGLDPLGIEELRGMIRSFPQQ-  178
             +  +KK +Q+SLGMKQRLGIA AI+  P+LLILDEPTNGLDP GIEE+R +I+S+P++ 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  179  GMSVIVSSHILSEVSILADHIGIIADGRLAYEN---ELHA  215
            GM+V++SSH+LSE+  +A  IGII +G L +++   ELH 
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

312) BCAH187_A3812 in NC_011658


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 6e-45, Method: Compositional matrix adjust.
 Identities = 109/217 (51%), Positives = 158/217 (73%), Gaps = 5/217 (2%)

Query  3    EIMLETKNLCKTFRKQSVVQNISLSVPKYSIYGLLGPNGAGKSTTLKMITGMLTPTSGEI  62
            E+++ T+ L K + K   V++I L VP+ ++YG+LGPNGAGKSTTLKM+ G+  PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   YFDGHKWTRHD----LHSIGALIESPPLYENLTARENLQVRTTVLGLPKSRIDEVLHIVE  118
             + G      +    L  IG+LIESP+ Y +LT+ EN+ +   +L+LPK  ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LENTDKKKAKDFSMGMKQRLGIAIALLNHPKFLILDEPMNGLDPFGIQELRKLILSFPGK  178
            LEN  +KK  ++S+GMKQRLGIA+A+++ PK+LILDEP NGLDP GI+E+R LI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVSQIADHVGIISGGVLGYQGKLN  214
             G+TV++SSH+LSE+ QIA  +GII+ G L +Q+ ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

313) BCN_3593 in NC_016771


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (639),  Expect = 6e-45, Method: Compositional matrix adjust.
 Identities = 109/217 (51%), Positives = 158/217 (73%), Gaps = 5/217 (2%)

Query  3    EIMLETKNLCKTFRKQSVVQNISLSVPKYSIYGLLGPNGAGKSTTLKMITGMLTPTSGEI  62
            E+++ T+ L K + K   V++I L VP+ ++YG+LGPNGAGKSTTLKM+ G+  PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   YFDGHKWTRHD----LHSIGALIESPPLYENLTARENLQVRTTVLGLPKSRIDEVLHIVE  118
             + G      +    L  IG+LIESP+ Y +LT+ EN+ +   +L+LPK  ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LENTDKKKAKDFSMGMKQRLGIAIALLNHPKFLILDEPMNGLDPFGIQELRKLILSFPGK  178
            LEN  +KK  ++S+GMKQRLGIA+A+++ PK+LILDEP NGLDP GI+E+R LI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVSQIADHVGIISGGVLGYQGKLN  214
             G+TV++SSH+LSE+ QIA  +GII+ G L +Q+ ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

314) Clocel_1510 in NC_014393


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (642),  Expect = 6e-45, Method: Compositional matrix adjust.
 Identities = 122/283 (44%), Positives = 195/283 (69%), Gaps = 10/283 (3%)

Query  20   VNKLSFGVKKGEVFGFLGPNGAGKTTTIRMIVGLIGITEGDVLVEGKSMK-TNKIEGLKQ  78
            V+ + + V +G V+GFLGPNGAGK+TT++M++GL   T+G++ + GK ++  N+I  LK+
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGAIVENPELYPYLTAIQNLRYFSRMYDNVSEERIMKVVKLVKLENALNQKVGTYSLGMR  138
            IG+++E+P  Y  LT+++N+    R+ D ++   +   +K+V+LEN  N+KV+ YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAVALLHNPKILILDEPTNGLDPAGIKELREYLKELAHKDNIAVVVSSHMLSEVEL  198
            QRLGIA+A++  PK+LILDEPTNGLDPAGI E+RE +K L++K  ++V++SSH+LSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  MCDRVGIVQKGELV---KTVDLNNRETSYTWLKIEADNLEVAKVLLKEKIKGIDVEIEDQ  255
            +   +GI++ GELV      +L+NR  S   + I + N+  A+ LL  + KG    I+D 
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQS--QIAIKTKNVVSAQKLL--NTKGYMSLIQDG  254

Query  256  ILKVKTEK-KDVPMILKVLLYNDIEVYNASFGKESLENIFLDL  297
             L +   K  DV+ I  +L+ ++I+V+     K SLE+IFL+L
Sbjct  255  YLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

315) BCE_5529 in NC_003909


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (642),  Expect = 6e-45, Method: Compositional matrix adjust.
 Identities = 116/280 (42%), Positives = 187/280 (67%), Gaps = 3/280 (1%)

Query  20   VENISFDVTQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGDISDERIMEIAQMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L D++   + E  ++V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPIGKAKDMLEDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  A+ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMNIASISNWNKHFVENEIDVHSVKELVFTLEDLFIEL  298
            +  ++ + +++ N  +V+++IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

316) BCK_14485 in NC_018491


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  173 bits (641),  Expect = 7e-45, Method: Compositional matrix adjust.
 Identities = 121/302 (41%), Positives = 211/302 (70%), Gaps = 9/302 (2%)

Query  1    MKYILETSKLVKIYESNTVVDSISLHIEKGKIYGLLGENGAGKTTTIRMIMGLLQPTSGD  60
            M  I+ T +L K Y+    V  I L++ +G +YG+LG NGAGK+TT++M++GL +PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VYIFGNKLDINNR-SFLGNIGAIIEYPGFYGNLSATDNLKISSNYMGVKDSKAIDRVLNI  119
            + I+G+ L+ +NR S+L +IG++IE P++YG+L++ +N+ I    +++   K ++  L+I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKI  119

Query  120  VNLQNVQHQKVKNFSLGMKQRLGIARSllhnpdllllDEPTNGLDPAGIKEIRELLIELA  179
            V L+N +++KV ++SLGMKQRLGIA +++  P LL+LDEPTNGLDPAGI EIREL+  L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEHQKTILVSSHILGEVQQVADNIGIIHEGRLLEESSMNKLDDKFGKYIRIKVNNINKCI  239
                 T+L+SSH+L+E++Q+A +IGII++G L+ + S++ L+++    I IK +N+    
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  EILKENVKHLDYR--FSNTDILINHF-EGNTAELNKLLNFAGIDVYEIVTVKQTLEDYFM  296
             +L+ +    +Y   + +  + I+++ +++ A +N +L  + IDV+ I   K++LED F+
Sbjct  240  KLLNTK----GYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  297  QI  298
            ++
Sbjct  296  EL  297

317) CbC4_6025 in NC_015418


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (635),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 110/222 (50%), Positives = 168/222 (76%), Gaps = 2/222 (0%)

Query  3    EIILKTKNLTKVFNNQISVDNLSITVERGDIYGFLGENGAGKTTTLKMILGLIPPTSGEI  62
            E+I++T+ L+K +N+ + V ++ + V +G +YGFLG NGAGK+TTLKM+LGL  PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   TLFNKNIK-KNDYSYFKKIGSIIEYPSFYESLTAYENLKLHEEYLGISNRKLIDESLDKL  121
             ++ K+++ KN  S +K IGS+IE PS+Y  LT+ EN+ + +  L++++++ ++E+L  +
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIV  120

Query  122  GILNDKNKKVCEFSLGMKQRLGIARAILHKPEILILDEPINGLDPMGIKEIREFIKNIAS  181
             + N+KNKKV ++SLGMKQRLGIA AI+  P +LILDEP NGLDP GI EIRE+IK+++ 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  182  VDNTTVIISSHILSEIQLLATKIGIIHKGKLLEEISIRTVKD  223
                TV+ISSH+LSEI+ +AT IGII+ G L+ + SI+ + +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

318) LMOf2365_0780 in NC_002973


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (638),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 117/272 (44%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSAIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+    KK+ ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

319) yhcH in NC_019556


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (638),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 117/272 (44%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSAIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+    KK+ ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

320) LMOSLCC2378_0776 in NC_018585


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (638),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 117/272 (44%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSAIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+    KK+ ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

321) M638_06540 in NC_021825


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (638),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 117/272 (44%), Positives = 187/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSAIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+    KK+ ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

322) BCAH187_A5579 in NC_011658


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (638),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 121/299 (41%), Positives = 192/299 (65%), Gaps = 3/299 (1%)

Query  1    MTTILSVRDLKKVIGKKTLVENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGT  60
            M  I+  + L K   K   V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPIGKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DMLEDAEEVREVSIEGDRLLCRMNIASISNWNKHFVENGIDVHSVKELVFTLEDLFIEL  298
             +L ++     +  +G   +  ++ + +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  240  KLL-NTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

323) BCK_08355 in NC_018491


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (638),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 121/299 (41%), Positives = 192/299 (65%), Gaps = 3/299 (1%)

Query  1    MTTILSVRDLKKVIGKKTLVENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGT  60
            M  I+  + L K   K   V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPIGKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DMLEDAEEVREVSIEGDRLLCRMNIASISNWNKHFVENGIDVHSVKELVFTLEDLFIEL  298
             +L ++     +  +G   +  ++ + +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  240  KLL-NTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

324) BCN_5328 in NC_016771


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (638),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 121/299 (41%), Positives = 192/299 (65%), Gaps = 3/299 (1%)

Query  1    MTTILSVRDLKKVIGKKTLVENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGT  60
            M  I+  + L K   K   V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPIGKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DMLEDAEEVREVSIEGDRLLCRMNIASISNWNKHFVENGIDVHSVKELVFTLEDLFIEL  298
             +L ++     +  +G   +  ++ + +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  240  KLL-NTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

325) BCQ_5242 in NC_011969


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (638),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 121/299 (41%), Positives = 192/299 (65%), Gaps = 3/299 (1%)

Query  1    MTTILSVRDLKKVIGKKTLVENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGT  60
            M  I+  + L K   K   V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPIGKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DMLEDAEEVREVSIEGDRLLCRMNIASISNWNKHFVENGIDVHSVKELVFTLEDLFIEL  298
             +L ++     +  +G   +  ++ + +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  240  KLL-NTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

326) Msm_0593 in NC_009515


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 116/252 (47%), Positives = 181/252 (72%), Gaps = 2/252 (0%)

Query  3    EYIIETKDLTKRFGKDVAVNSVNMKIERGQIYGLLGRNGAGKTTTMCMLLNLSKPSSGEI  62
            E II T+ L+K + K   V+ +++++ +G +YG+LG NGAGK+TT+ MLL L+KP+ G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   NLFGEDYRKHPKENYSK-IGSIIETPGFYENLNAVENLKIIAKLRGNYNRKTIDEVLNLV  121
            N++G +     + +  K IGS+IE+P++Y +L ++EN+ I+ +L  +  +K ++E L++V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIV  120

Query  122  CLYDAKYKKFKDFSLGMKQRLGIAAAIMHSPELLILDEPINGLDPVGIKEIRALLKTLAH  181
             L + K KK  ++SLGMKQRLGIA AIM  P LLILDEP NGLDP GI EIR L+K+L++
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  182  DYGTTilisshilseiehiADVIGVMDHGNLIEELSKEELENRLNKHADFKVSDIQLASK  241
             YG T+LISSH+LSEI++IA  IG+++HG+L+ + S  EL+NR + +  +K  ++  A K
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  242  ILKQSGFRENID  253
            +L+  G+   I+
Sbjct  241  LLNTKGYMSLIQ  252

327) Bcer98_3921 in NC_009674


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 118/280 (43%), Positives = 189/280 (68%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIQATEGEISIGGYHIKDNFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL ++T+G+I+I G +++++ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGFENLKQFARMLGGIPDERIFEIAKMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG+EN+    R+L+ +P   + E  K+V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGRPKLLILDEPTNGLDPAGIRELREFIHKLVREEKMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIQKGKIITVAPIEELIKAASDRVEWIVTPILKAKDLLEKSEEVTEISIDHHRL  258
            I   ++II+ G ++   +I EL + +  ++      ++ A+ LL+    ++ I  D    
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQ-DGYLT  257

Query  259  LCRMDVKSISSWNKRFVESEIEVHSVKELVFTLEDLFIEL  298
            +  +    ++  N  +V+S+I+V  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

328) BCZK5098 in NC_006274


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 116/280 (42%), Positives = 182/280 (65%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGSISDERIIEIAHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L  ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAKDMLEDAEEVREVSMEGNRL  258
            I   ++II+ G ++    + EL + +  ++      +  A+ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

329) bcrA6 in NC_018877


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (635),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 118/283 (42%), Positives = 186/283 (66%), Gaps = 9/283 (3%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGKISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G+I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L D++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAKDMLEAA---EEIREVSVKG  255
            I   ++II+ G ++    + EL + +  ++      +  A+ +L++      I++  +  
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  256  ERLLCRMDIASISSWNKKFVENEIDVHSVKELVFTLEDLFIEL  298
            E L      + ++  N  +V+++IDV  + E   +LED+F+EL
Sbjct  259  ENL----KDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

330) CT43_CH5440 in NC_017208


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (635),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 118/283 (42%), Positives = 186/283 (66%), Gaps = 9/283 (3%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGKISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G+I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L D++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAKDMLEAA---EEIREVSVKG  255
            I   ++II+ G ++    + EL + +  ++      +  A+ +L++      I++  +  
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  256  ERLLCRMDIASISSWNKKFVENEIDVHSVKELVFTLEDLFIEL  298
            E L      + ++  N  +V+++IDV  + E   +LED+F+EL
Sbjct  259  ENL----KDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

331) H175_ch5531 in NC_020376


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (635),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 118/283 (42%), Positives = 186/283 (66%), Gaps = 9/283 (3%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGKISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G+I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L D++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAKDMLEAA---EEIREVSVKG  255
            I   ++II+ G ++    + EL + +  ++      +  A+ +L++      I++  +  
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  256  ERLLCRMDIASISSWNKKFVENEIDVHSVKELVFTLEDLFIEL  298
            E L      + ++  N  +V+++IDV  + E   +LED+F+EL
Sbjct  259  ENL----KDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

332) CLB_3409 in NC_009697


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (635),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 99/236 (42%), Positives = 174/236 (74%), Gaps = 3/236 (1%)

Query  19   IKGVSFSVKTGEIFGFLGPNGAGKTTTIRMLVGLIAPTKGNIKIMGHDI-QRDRREALKN  77
            +K++ + V  G ++GFLGPNGAGK+TT++ML+GL  PT+GNI+I+G ++ +++R   LK+
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  78   VGCIVENPDMYNDLTGMQNLKFYADLYGDISKERIDEVIELVGLKGRINDKVRKYSLGMK  137
            +G ++E+P  Y +LTG++N+ +   L  D++K  ++E + +V L  + N KV +YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  138  QRLGLGQAILSNPKLLILDEPTNGLDPIGIHEFRDIVKYAAKKSNSAVFVSSHILSEIEQ  197
            QRLG++ AI+  PKLLILDEPTNGLDP GI+E+R+++K  + K   +V++SSH+LSEI+Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  198  MCDSFAIIDNGIIKTIESVSE-ESSDTERLKISTNEIRNIQNAFSKLDFIRIINVG  252
            +  S++II++G +   +S+ E ++ +  ++ I T+++ + Q+ ++  +++ +I+ G
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDG  254

333) CBO3351 in NC_009495


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (635),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 99/236 (42%), Positives = 174/236 (74%), Gaps = 3/236 (1%)

Query  19   IKGVSFSVKTGEIFGFLGPNGAGKTTTIRMLVGLIAPTKGNIKIMGHDI-QRDRREALKN  77
            +K++ + V  G ++GFLGPNGAGK+TT++ML+GL  PT+GNI+I+G ++ +++R   LK+
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  78   VGCIVENPDMYNDLTGMQNLKFYADLYGDISKERIDEVIELVGLKGRINDKVRKYSLGMK  137
            +G ++E+P  Y +LTG++N+ +   L  D++K  ++E + +V L  + N KV +YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  138  QRLGLGQAILSNPKLLILDEPTNGLDPIGIHEFRDIVKYAAKKSNSAVFVSSHILSEIEQ  197
            QRLG++ AI+  PKLLILDEPTNGLDP GI+E+R+++K  + K   +V++SSH+LSEI+Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  198  MCDSFAIIDNGIIKTIESVSE-ESSDTERLKISTNEIRNIQNAFSKLDFIRIINVG  252
            +  S++II++G +   +S+ E ++ +  ++ I T+++ + Q+ ++  +++ +I+ G
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDG  254

334) CLC_3296 in NC_009698


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (635),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 99/236 (42%), Positives = 174/236 (74%), Gaps = 3/236 (1%)

Query  19   IKGVSFSVKTGEIFGFLGPNGAGKTTTIRMLVGLIAPTKGNIKIMGHDI-QRDRREALKN  77
            +K++ + V  G ++GFLGPNGAGK+TT++ML+GL  PT+GNI+I+G ++ +++R   LK+
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  78   VGCIVENPDMYNDLTGMQNLKFYADLYGDISKERIDEVIELVGLKGRINDKVRKYSLGMK  137
            +G ++E+P  Y +LTG++N+ +   L  D++K  ++E + +V L  + N KV +YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  138  QRLGLGQAILSNPKLLILDEPTNGLDPIGIHEFRDIVKYAAKKSNSAVFVSSHILSEIEQ  197
            QRLG++ AI+  PKLLILDEPTNGLDP GI+E+R+++K  + K   +V++SSH+LSEI+Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  198  MCDSFAIIDNGIIKTIESVSE-ESSDTERLKISTNEIRNIQNAFSKLDFIRIINVG  252
            +  S++II++G +   +S+ E ++ +  ++ I T+++ + Q+ ++  +++ +I+ G
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDG  254

335) CLJ_B3637 in NC_012658


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 99/236 (42%), Positives = 174/236 (74%), Gaps = 3/236 (1%)

Query  19   IKGVSFSVKTGEIFGFLGPNGAGKTTTIRMLVGLIAPTKGNIKIMGHDI-QRDRREALKN  77
            +K++ + V  G ++GFLGPNGAGK+TT++ML+GL  PT+GNI+I+G ++ +++R   LK+
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  78   VGCIVENPDMYNDLTGMQNLKFYADLYGDISKERIDEVIELVGLKGRINDKVRKYSLGMK  137
            +G ++E+P  Y +LTG++N+ +   L  D++K  ++E + +V L  + N KV +YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  138  QRLGLGQAILSNPKLLILDEPTNGLDPIGIHEFRDIVKYAAKKSNSAVFVSSHILSEIEQ  197
            QRLG++ AI+  PKLLILDEPTNGLDP GI+E+R+++K  + K   +V++SSH+LSEI+Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  198  MCDSFAIIDNGIIKTIESVSE-ESSDTERLKISTNEIRNIQNAFSKLDFIRIINVG  252
            +  S++II++G +   +S+ E ++ +  ++ I T+++ + Q+ ++  +++ +I+ G
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDG  254

336) YBT020_26930 in NC_017200


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (635),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 121/299 (41%), Positives = 192/299 (65%), Gaps = 3/299 (1%)

Query  1    MTTILSVRDLKKVIGKKTLVENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGT  60
            M  I+  + L K   K   V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMIRVAKVEELIKTASDRVEWIVTPIGKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DMLEDAEEVREVSIEGERLLCRMNIASISNWNKHFVENGIDVHSVKELVFTLEDLFIEL  298
             +L ++     +  +G   +  ++ + +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  240  KLL-NTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

337) CD630_13490 in NC_009089


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  172 bits (637),  Expect = 9e-45, Method: Compositional matrix adjust.
 Identities = 106/214 (50%), Positives = 157/214 (74%), Gaps = 5/214 (2%)

Query  5    ILQVKGVSKKFKEQMAVDNISLAIKSNSIYGLLGPNGAGKSTLLKMITGILNPTSGKIMF  64
            I++ + +SK ++    V +I L +   ++YG+LGPNGAGKST LKM+ G+ +PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   EGHRWTRKD----LSNIGSLIESPAIYENLTARENLKVHTTLLGLPDSRIEEVLETVDLR  120
             G     K+    L +IGSLIESP+ Y +LT+ EN+ +   LL+LP   ++E L  V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  DTFKKRSGQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIEELRELIRSFP-KQG  179
            +  +K+ +Q+SLGMKQRLGIA+A+++ PKLLILDEPTNGLDP GIEE+RELI+S+P K G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILSEVEQVVDEIGIISNGVMGYQGEV  213
            +TV++SSH+LSE++Q+   IGII++G + +Q+ +
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

338) CLJ_B1689 in NC_012658


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  171 bits (633),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 105/215 (49%), Positives = 159/215 (74%), Gaps = 5/215 (2%)

Query  5    ILQTKDLCKVFKGQHAVNNISITVKENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIF  64
            I++T+ L K ++    V++I + V + +VYG+LGPNGAGKST LKML G+ +PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   DNHHWTRKD----LVSIGALIEAPPLYENLTARENLKVRTTLLGLKNSRIDEVLKIVDLT  120
               +   K+    L  IG+LIE+P+ Y +LT+ EN+ +   LL+L +  ++E LKIV L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKTAGKFSMGMKQRLGIAIALLNNPKLLILDEPTNGLDPIGIQELRELIRSFPRQ-G  179
            N  +K  +++S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P + G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILAEVQLIADHIGIISNGMLGYEAKIN  214
            +TV++SSH+L+E++ IA  IGII++G L ++  I+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

339) CLM_1823 in NC_012563


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  171 bits (631),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 105/215 (49%), Positives = 158/215 (74%), Gaps = 5/215 (2%)

Query  5    ILQTKDLCKVFKGQHAVNNISITVKENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIF  64
            I++T+ L K ++    V++I + V + +VYG+LGPNGAGKST LKML G+ +PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   DNHHWTRKD----LVSIGALIEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLT  120
               +   K+    L  IG+LIE+P+ Y +LT+ EN+ +   LL+L    ++E LKIV L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  NTGKKTAGKFSMGMKQRLGIAIALLNNPKLLILDEPTNGLDPIGIQELRELIRSFPRQ-G  179
            N  +K  +++S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P + G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILAEVQLIADHIGIISNGMLGYEAKIN  214
            +TV++SSH+L+E++ IA  IGII++G L ++  I+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

340) CLM_3799 in NC_012563


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  171 bits (633),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 98/236 (42%), Positives = 174/236 (74%), Gaps = 3/236 (1%)

Query  19   IKGVSFSVKTGEIFGFLGPNGAGKTTTIRMLVGLIAPTKGNIKIMGHDI-QRDRREALKN  77
            +K++ + V  G ++GFLGPNGAGK+TT++ML+GL  PT+GNI+I+G ++ +++R   LK+
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  78   VGCIVENPDMYNDLTGMQNLRFYADLYGDISKERIDEVIELVGLKGRINDKVRKYSLGMK  137
            +G ++E+P  Y +LTG++N+ +   L  D++K  ++E + +V L  + N KV +YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  138  QRLGLGQAILSNPKLLILDEPTNGLDPIGIHEFRDIVKYAAKKSNSAVFVSSHILSEIEQ  197
            QRLG++ AI+  PKLLILDEPTNGLDP GI+E+R+++K  + K   +V++SSH+LSEI+Q
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  198  MCDSFAIIDNGIIKTIESVSD-ESSDTERLKISTNEIRNIQNAFSKLDFIRIINVG  252
            +  S++II++G +   +S+ + ++ +  ++ I T+++ + Q+ ++  +++ +I+ G
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDG  254

341) Fluta_3064 in NC_015321


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  171 bits (632),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 111/246 (46%), Positives = 166/246 (68%), Gaps = 3/246 (1%)

Query  4    QTIIKVQNLSKKFGSFEAVKNVSFTVNKGDVFGFLGPNGAGKSTTIRCLLSLISPDSGSI  63
            + II+ Q LSK +  +  VK++ + V +G V+GFLGPNGAGKSTT++ LL+L  P  G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   ELFDKSLS-KNRSEILANIGSIIEKPDFYKYLSAQKNLEIFARISGANVSKKEIAEMLDF  122
            ++++K L+ KNR  IL +IGS+IE P +Y  L++  N+ I  R+   +++KK++ E L +
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRL--LDLPKKNVNEALKI  119

Query  123  VGLGDRAKHKVKGFSHGMKQRLGIAQTLLHKPELIILDEPTTGLDPQGIIEIRNLILRLK  182
            V L ++ + KV  +S GMKQRLGIA +++  P L+ILDEPT GLDP GI EIR+LI  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  183  NEQNKTILLSSHQLSEIELIANRMVIINQGKSIVEGSVEELLNSEETLVRIEVDQVDSAI  242
            +    T+L+SSH LSEI+ IA  + IIN+G  + ++S+ EL N  ++ + I   +V SA 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  243  ELIRMK  248
             L+  K
Sbjct  240  KLLNTK  245

342) LMOSLCC2376_0723 in NC_018590


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  171 bits (632),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 114/272 (42%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGEDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I G ++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYL-VTAVNEHS  263
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL +  +++  
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  264  AEW-NEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
                N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

343) M637_06425 in NC_021824


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  171 bits (631),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 115/272 (43%), Positives = 186/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKATSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL K+T G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   PEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
            P +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

344) BCA_5552 in NC_012472


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  171 bits (631),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 116/280 (42%), Positives = 183/280 (66%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEITHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAKDMLVDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  A+ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

345) BCAH820_5495 in NC_011773


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  171 bits (631),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 116/280 (42%), Positives = 183/280 (66%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAKDMLVDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  A+ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

346) bcf_27120 in NC_016779


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  171 bits (631),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 116/280 (42%), Positives = 183/280 (66%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAKDMLVDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  A+ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

347) BACI_c37170 in NC_014335


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 108/217 (50%), Positives = 158/217 (73%), Gaps = 5/217 (2%)

Query  3    EIMLETKNLCKTFRQQSVVQNISLSVPKYAIYGLLGPNGAGKSTTLKMITGMLIPTSGEI  62
            E+++ T+ L K + +   V++I L VP+ A+YG+LGPNGAGKSTTLKM+ G+  PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   YFDGHKWTRHD----LHSIGALIESPPLYENLTARENLQVRTTVLGLPKSRIDEVLHVVE  118
             + G      +    L  IG+LIESP+ Y +LT+ EN+ +   +L+LPK  ++E L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LENTEKKKAKDFSMGMKQRLGIAIALLNHPKFLILDEPMNGLDPFGIQELRKLILSFPGK  178
            LEN  +KK  ++S+GMKQRLGIA+A+++ PK+LILDEP NGLDP GI+E+R LI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVSQIADHVGIISGGVLGYQGKLN  214
             G+TV++SSH+LSE+ QIA  +GII+ G L +Q+ ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

348) CLK_1049 in NC_010520


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 104/212 (50%), Positives = 156/212 (74%), Gaps = 9/212 (4%)

Query  8    TKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGQIIFDNH  67
            +K+  K+F+    V++I + V + +VYG+LGPNGAGKST LKML G+ +PT G+I +   
Sbjct  11   SKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  68   HWTRKD----LVSIGALIEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTG  123
            +   K+    L  IG+LIE+P+ Y +LT+ EN+ +   LL+L    ++E LKIV L N  
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  124  KKTAGKFSMGMKQRLGIAIALLNNPRLLILDEPTNGLDPIGIQELRELIRSFP-KQGITV  182
            +K  +++S+GMKQRLGIA+A+++ P+LLILDEPTNGLDP GI+E+RELI+S+P K G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  183  ILSSHILAEVQLIADHIGIISNGILGYEAKIN  214
            ++SSH+L+E++ IA  IGII++G L ++  I+
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

349) CLB_1602 in NC_009697


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 105/212 (50%), Positives = 156/212 (74%), Gaps = 9/212 (4%)

Query  8    TKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIFDNH  67
            +K+  K+F+    V++I + V + +VYG+LGPNGAGKST LKML G+ +PT G+I +   
Sbjct  11   SKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  68   HWTRKD----LVSIGALIEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTG  123
            +   K+    L  IG+LIE+P+ Y +LT+ EN+ +   LL+L    ++E LKIV L N  
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  124  KKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGLDPIGIQELRELIRSFP-KQGITV  182
            +K  +++S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P K G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  183  ILSSHILAEVQLIADHIGIISNGILGYEAKIN  214
            ++SSH+L+E++ IA  IGII++G L ++  I+
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

350) CBO1582 in NC_009495


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (630),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 105/212 (50%), Positives = 156/212 (74%), Gaps = 9/212 (4%)

Query  11   TKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIFDNH  70
            +K+  K+F+    V++I + V + +VYG+LGPNGAGKST LKML G+ +PT G+I +   
Sbjct  11   SKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  71   HWTRKD----LVSIGALIEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTG  126
            +   K+    L  IG+LIE+P+ Y +LT+ EN+ +   LL+L    ++E LKIV L N  
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  127  KKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGLDPIGIQELRELIRSFP-KQGITV  185
            +K  +++S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P K G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  186  ILSSHILAEVQLIADHIGIISNGILGYEAKIN  217
            ++SSH+L+E++ IA  IGII++G L ++  I+
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

351) CLC_1612 in NC_009698


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 105/212 (50%), Positives = 156/212 (74%), Gaps = 9/212 (4%)

Query  8    TKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIFDNH  67
            +K+  K+F+    V++I + V + +VYG+LGPNGAGKST LKML G+ +PT G+I +   
Sbjct  11   SKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  68   HWTRKD----LVSIGALIEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTG  123
            +   K+    L  IG+LIE+P+ Y +LT+ EN+ +   LL+L    ++E LKIV L N  
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  124  KKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGLDPIGIQELRELIRSFP-KQGITV  182
            +K  +++S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P K G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  183  ILSSHILAEVQLIADHIGIISNGILGYEAKIN  214
            ++SSH+L+E++ IA  IGII++G L ++  I+
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

352) CLH_2011 in NC_010723


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 109/217 (51%), Positives = 163/217 (76%), Gaps = 5/217 (2%)

Query  3    DIILETKNLSKTFKKQEAVKGVSILVERNSIYGLLGPNGAGKSTILKMITGMLKPSFGEI  62
            ++I+ T+ LSK ++K   VK++ + V + ++YG+LGPNGAGKST LKM+ G+ KP+ G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   LFNDHKWSRKD----LKLIGSLIENAPLYENLSARENLKVRTIVLGLPDSRIDEVLDIVE  118
             + +   + K+    LK IGSLIE+++ Y +L++ EN+ +   +L+LP   ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LKNTGRKKSGQFSMGMKQRLGIAIALLNNPKLLILDEPTNGLDPFGIQELRELIKSFPSK  178
            L N   KK +Q+S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELIKS+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVEQVADHIGIICGGILGYQGKLR  214
             G+TV++SSH+LSE++Q+A  IGII  G L +Q+ ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

353) BAA_3928 in NC_012659


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 107/217 (50%), Positives = 158/217 (73%), Gaps = 5/217 (2%)

Query  3    EIMLETKNLCKTFRQQSVVQNISLSVPKYAIYGLLGPNGAGKSTTLKMITGMLIPTSGEI  62
            E+++ T+ L K + +   V++I L VP+ A+YG+LGPNGAGKSTTLKM+ G+  PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   YFDGHKWTRHD----LHSIGALIDSPPLYENLTARENLQVRTTVLGLPKSRIDEVLHVVE  118
             + G      +    L  IG+LI+SP+ Y +LT+ EN+ +   +L+LPK  ++E L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LENTEKKKAKDFSMGMKQRLGIAIALLNHPKFLILDEPMNGLDPFGIQELRKLILSFPGK  178
            LEN  +KK  ++S+GMKQRLGIA+A+++ PK+LILDEP NGLDP GI+E+R LI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVSQIADHVGIISGGVLGYQGKLN  214
             G+TV++SSH+LSE+ QIA  +GII+ G L +Q+ ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

354) GBAA_3903 in NC_007530


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 107/217 (50%), Positives = 158/217 (73%), Gaps = 5/217 (2%)

Query  3    EIMLETKNLCKTFRQQSVVQNISLSVPKYAIYGLLGPNGAGKSTTLKMITGMLIPTSGEI  62
            E+++ T+ L K + +   V++I L VP+ A+YG+LGPNGAGKSTTLKM+ G+  PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   YFDGHKWTRHD----LHSIGALIDSPPLYENLTARENLQVRTTVLGLPKSRIDEVLHVVE  118
             + G      +    L  IG+LI+SP+ Y +LT+ EN+ +   +L+LPK  ++E L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LENTEKKKAKDFSMGMKQRLGIAIALLNHPKFLILDEPMNGLDPFGIQELRKLILSFPGK  178
            LEN  +KK  ++S+GMKQRLGIA+A+++ PK+LILDEP NGLDP GI+E+R LI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVSQIADHVGIISGGVLGYQGKLN  214
             G+TV++SSH+LSE+ QIA  +GII+ G L +Q+ ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

355) BA_3903 in NC_003997


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 107/217 (50%), Positives = 158/217 (73%), Gaps = 5/217 (2%)

Query  3    EIMLETKNLCKTFRQQSVVQNISLSVPKYAIYGLLGPNGAGKSTTLKMITGMLIPTSGEI  62
            E+++ T+ L K + +   V++I L VP+ A+YG+LGPNGAGKSTTLKM+ G+  PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   YFDGHKWTRHD----LHSIGALIDSPPLYENLTARENLQVRTTVLGLPKSRIDEVLHVVE  118
             + G      +    L  IG+LI+SP+ Y +LT+ EN+ +   +L+LPK  ++E L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LENTEKKKAKDFSMGMKQRLGIAIALLNHPKFLILDEPMNGLDPFGIQELRKLILSFPGK  178
            LEN  +KK  ++S+GMKQRLGIA+A+++ PK+LILDEP NGLDP GI+E+R LI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVSQIADHVGIISGGVLGYQGKLN  214
             G+TV++SSH+LSE+ QIA  +GII+ G L +Q+ ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

356) BAMEG_0728 in NC_012581


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 107/217 (50%), Positives = 158/217 (73%), Gaps = 5/217 (2%)

Query  3    EIMLETKNLCKTFRQQSVVQNISLSVPKYAIYGLLGPNGAGKSTTLKMITGMLIPTSGEI  62
            E+++ T+ L K + +   V++I L VP+ A+YG+LGPNGAGKSTTLKM+ G+  PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   YFDGHKWTRHD----LHSIGALIDSPPLYENLTARENLQVRTTVLGLPKSRIDEVLHVVE  118
             + G      +    L  IG+LI+SP+ Y +LT+ EN+ +   +L+LPK  ++E L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LENTEKKKAKDFSMGMKQRLGIAIALLNHPKFLILDEPMNGLDPFGIQELRKLILSFPGK  178
            LEN  +KK  ++S+GMKQRLGIA+A+++ PK+LILDEP NGLDP GI+E+R LI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVSQIADHVGIISGGVLGYQGKLN  214
             G+TV++SSH+LSE+ QIA  +GII+ G L +Q+ ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

357) H9401_3717 in NC_017729


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 107/217 (50%), Positives = 158/217 (73%), Gaps = 5/217 (2%)

Query  3    EIMLETKNLCKTFRQQSVVQNISLSVPKYAIYGLLGPNGAGKSTTLKMITGMLIPTSGEI  62
            E+++ T+ L K + +   V++I L VP+ A+YG+LGPNGAGKSTTLKM+ G+  PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   YFDGHKWTRHD----LHSIGALIDSPPLYENLTARENLQVRTTVLGLPKSRIDEVLHVVE  118
             + G      +    L  IG+LI+SP+ Y +LT+ EN+ +   +L+LPK  ++E L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LENTEKKKAKDFSMGMKQRLGIAIALLNHPKFLILDEPMNGLDPFGIQELRKLILSFPGK  178
            LEN  +KK  ++S+GMKQRLGIA+A+++ PK+LILDEP NGLDP GI+E+R LI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVSQIADHVGIISGGVLGYQGKLN  214
             G+TV++SSH+LSE+ QIA  +GII+ G L +Q+ ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

358) BAS3616 in NC_005945


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 107/217 (50%), Positives = 158/217 (73%), Gaps = 5/217 (2%)

Query  3    EIMLETKNLCKTFRQQSVVQNISLSVPKYAIYGLLGPNGAGKSTTLKMITGMLIPTSGEI  62
            E+++ T+ L K + +   V++I L VP+ A+YG+LGPNGAGKSTTLKM+ G+  PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   YFDGHKWTRHD----LHSIGALIDSPPLYENLTARENLQVRTTVLGLPKSRIDEVLHVVE  118
             + G      +    L  IG+LI+SP+ Y +LT+ EN+ +   +L+LPK  ++E L +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LENTEKKKAKDFSMGMKQRLGIAIALLNHPKFLILDEPMNGLDPFGIQELRKLILSFPGK  178
            LEN  +KK  ++S+GMKQRLGIA+A+++ PK+LILDEP NGLDP GI+E+R LI S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVSQIADHVGIISGGVLGYQGKLN  214
             G+TV++SSH+LSE+ QIA  +GII+ G L +Q+ ++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

359) CDBI1_06200 in NC_017179


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 105/214 (50%), Positives = 156/214 (73%), Gaps = 5/214 (2%)

Query  5    ILQVKGVSKKFKEQMAVDNISLAIKSNSIYGLLGPNGAGKSTLLKMITGILNPTSGKIMF  64
            I++ + +SK ++    V +I L +   ++YG+LGPNGAGKST LKM+ G+ +PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   EGHRWTRKD----LSNIGSLIESPAIYENLTARENLKVHTTLLGLPDSRIEEVLETVDLR  120
             G     K+    L +IGSLIESP+ Y +LT+ EN+ +   LL+LP   ++E L  V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  121  DTFKKRSGQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIEELRKLIRSFP-KQG  179
            +  +K+ +Q+SLGMKQRLGIA+A+++ PKLLILDEPTNGLDP GIEE+R LI+S+P K G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  180  ITVILSSHILSEVEQVVDEIGIISNGVIGYQGEV  213
            +TV++SSH+LSE++Q+   IGII++G + +Q+ +
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

360) CD196_1213 in NC_013315


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 105/214 (50%), Positives = 156/214 (73%), Gaps = 5/214 (2%)

Query  8    ILQVKGVSKKFKEQMAVDNISLAIKSNSIYGLLGPNGAGKSTLLKMITGILNPTSGKIMF  67
            I++ + +SK ++    V +I L +   ++YG+LGPNGAGKST LKM+ G+ +PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  68   EGHRWTRKD----LSNIGSLIESPAIYENLTARENLKVHTTLLGLPDSRIEEVLETVDLR  123
             G     K+    L +IGSLIESP+ Y +LT+ EN+ +   LL+LP   ++E L  V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  DTFKKRSGQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIEELRKLIRSFP-KQG  182
            +  +K+ +Q+SLGMKQRLGIA+A+++ PKLLILDEPTNGLDP GIEE+R LI+S+P K G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  183  ITVILSSHILSEVEQVVDEIGIISNGVIGYQGEV  216
            +TV++SSH+LSE++Q+   IGII++G + +Q+ +
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

361) CDR20291_1191 in NC_013316


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 105/214 (50%), Positives = 156/214 (73%), Gaps = 5/214 (2%)

Query  8    ILQVKGVSKKFKEQMAVDNISLAIKSNSIYGLLGPNGAGKSTLLKMITGILNPTSGKIMF  67
            I++ + +SK ++    V +I L +   ++YG+LGPNGAGKST LKM+ G+ +PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  68   EGHRWTRKD----LSNIGSLIESPAIYENLTARENLKVHTTLLGLPDSRIEEVLETVDLR  123
             G     K+    L +IGSLIESP+ Y +LT+ EN+ +   LL+LP   ++E L  V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  124  DTFKKRSGQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIEELRKLIRSFP-KQG  182
            +  +K+ +Q+SLGMKQRLGIA+A+++ PKLLILDEPTNGLDP GIEE+R LI+S+P K G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  183  ITVILSSHILSEVEQVVDEIGIISNGVIGYQGEV  216
            +TV++SSH+LSE++Q+   IGII++G + +Q+ +
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

362) BALH_4901 in NC_008600


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (630),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 121/299 (41%), Positives = 190/299 (64%), Gaps = 3/299 (1%)

Query  1    MTTILSVRDVKKVIGKKTIVENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGT  60
            M  I+  + + K   K   V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DMLVDAEEVREVSIEGDRLLCRMPISSVSNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
             +L ++     +  +G   +  +  S V++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  240  KLL-NTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

363) H04402_01651 in NC_017299


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (627),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 106/212 (50%), Positives = 159/212 (75%), Gaps = 9/212 (4%)

Query  8    TKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKI-IFDK  66
            +K+  K+F+    V++I + V + +VYG+LGPNGAGKST LKML G+ +PT G+I I++K
Sbjct  11   SKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  67   HHWTRKD---LVSIGALIEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTG  123
            +   ++    L  IG+LIE+P+ Y +LT+ EN+ +   LL+L    ++E LKIV L N  
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  124  KKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGLDPIGIQELRELIRSFP-KQGITV  182
            +K  +++S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P K G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  183  ILSSHILAEVQLIADHIGIISNGILGYEAKIN  214
            ++SSH+L+E++ IA  IGII++G L ++  I+
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

364) BcerKBAB4_5193 in NC_010184


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (630),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 111/243 (46%), Positives = 163/243 (68%), Gaps = 2/243 (0%)

Query  1    MTTILSVRDLKKVIGKKTLVEDISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGT  60
            M  I+  + L K   K   V DI + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAKM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E  K+
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQLICDRVAIIHKGKMITVAPIEELIKTASDRVEWVVTPISKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++   +I EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DML  242
             +L
Sbjct  240  KLL  242

365) Sgly_1236 in NC_015172


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (628),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 97/211 (46%), Positives = 151/211 (72%), Gaps = 1/211 (0%)

Query  5    DLAVKTEKLVKAFSGQEMIKSCKMNVRYGCIYGFLGANGAGKTTMFKMLTGLLLPTAGKA  64
            ++ ++T++L K ++    +K   + V  G +YGFLG+NGAGK+T +KML GL  PT G+ 
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  65   EVLGMDVVGR-RDDILKNIGSMIDVPIFYDHLTAVKNLEIHLAYMGVQGMGIPAALELVG  123
            ++LG ++  + R  ILK+IGS+I+ P +Y+HLT++ N+ I    +++    +  AL +V 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  124  LEPSNKQPVSRYSLGMRQRLGIARAVVHNPKLLILDEPINGLDPMGIREMRELFLRLVQK  183
            LE  +++ VS+YSLGM+QRLGIA A++  PKLLILDEP NGLDP GI E+REL+  L +K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  184  KNMTILLSSHMLNEIEHTADTVGVIVNGTIV  214
              MT+L+SSH+L+EI++ A ++G+I +G +V
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELV  212

366) BCB4264_A5523 in NC_011725


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (629),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 109/243 (45%), Positives = 162/243 (67%), Gaps = 2/243 (0%)

Query  1    MTMILSVRDLKKVIGKKTLVENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGT  60
            M MI+  + L K   K   V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DML  242
             +L
Sbjct  240  KLL  242

367) BAA_5677 in NC_012659


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (630),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 115/280 (42%), Positives = 183/280 (66%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKTKDMLVDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  ++ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

368) GBAA_5650 in NC_007530


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (630),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 115/280 (42%), Positives = 183/280 (66%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKTKDMLVDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  ++ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

369) BA_5650 in NC_003997


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (630),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 115/280 (42%), Positives = 183/280 (66%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKTKDMLVDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  ++ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

370) BAMEG_5694 in NC_012581


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (630),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 115/280 (42%), Positives = 183/280 (66%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKTKDMLVDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  ++ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

371) H9401_5391 in NC_017729


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (630),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 115/280 (42%), Positives = 183/280 (66%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKTKDMLVDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  ++ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

372) BAS5252 in NC_005945


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (630),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 115/280 (42%), Positives = 183/280 (66%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKTKDMLVDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  ++ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

373) Msp_0610 in NC_007681


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (627),  Expect = 9e-44, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 212/300 (71%), Gaps = 6/300 (2%)

Query  1    MEYIIQTQNLTKKYKNDTVVNNLNLKIKEGEIYGLLGQNGAGKTTTMCLLTNLSEKTSGQ  60
            ME II+TQ L+K Y++   V++++L++ +G +YG+LG NGAGK+TT+ +L  L+  T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IRIFGKNPQEN--IDIYKKIGVIIETPGFYENLTGFENLKYFSKIQGNYNKEKVEHALNT  118
            I I+GK+ +E+  I I K IG +IE+P++Y +LTG+EN+    ++  +  K +V++AL+ 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  119  MGLTNNK-KLVKAYSLGMKQRLAIALTIMNNPDILILDEPINGLDPLGIQEIRQYLKKLA  177
            + L N+K K V  YSLGMKQRL+IA++IM+ P +LILDEP NGLDP GI+EIR+ +K L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  178  TKNNTTiiisshilseieQLVDTIGIIHHGQLLEQISMNTFREKTKKYIQIEVSDTYKAS  237
             K   T++ISSH+LSEI+Q+  +IGII+HG+L+ Q S++ ++++ +  I I   +   A 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  238  YILK-KAFkiipeinknqiiiRKDFDKISQINKLFVKNNIDVYQIKIQQDTLDEYYLKVI  296
             +L+ K++  + +     I   KD D +++IN ++V +NIDV++I  ++ +L++ +L ++
Sbjct  240  KLLNTKGYMSLIQDGYLTIENLKDSD-VAKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

374) Cbei_4671 in NC_009617


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  170 bits (627),  Expect = 9e-44, Method: Compositional matrix adjust.
 Identities = 115/281 (41%), Positives = 194/281 (70%), Gaps = 8/281 (2%)

Query  21   VKGITFSINEGEVLGFLGPNGAGKSTTLRMIVGLSSPTSGKILIDGYSIT-KDYVKAMSK  79
            VK+I + + +G V GFLGPNGAGKSTTL+M++GL+ PT G+I I G  +  K+ +  +  
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  80   VGCIIEGPDMYNYLSGLENLKMLASMNKNITNKDITRVIELVGMQNRINEKVSTYSLGMK  139
            +G +IE+P  Y  L+GLEN+ ++  +  ++ +K++   + +V ++N+ N KVS YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  140  QRLGLAQALIHKPKLLILDEPTNGLDPSGINEFRHIIKDLAKKENIAVLVSSHLISEVEL  199
            QRLG+A A++  PKLLILDEPTNGLDP+GI+E+R++IK L+ K  ++VL+SSHL+SE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  200  MCDTVAIIKSGTLLKYASVSEL--ISDKEVSFVLSDNSKGIKILKDKWNIDSSLINNT--  255
            +  +++II+ G L+   S+ EL   ++ ++++   +   + K+L+ K  +  SLI++   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYM--SLIQDGYL  256

Query  256  IIAKVDVSKIEKINSSFIEEGIAIKFVSVNQKTLEDLFLSL  296
             I ++  S + KIN+ +++  I +  +  ++K+LED+FL L
Sbjct  257  TIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

375) BT9727_5081 in NC_005957


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  169 bits (625),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 115/280 (42%), Positives = 182/280 (65%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHMVHLDERIHDKVKTYSLGMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAKDMLVDAEEVRDVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  A+ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMDIASISSWNKHFVENGIDVHSVKELVFTLEDLFIEL  298
            +  +  + ++  N  +V++ IDV  + E   +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

376) BBR47_40520 in NC_012491


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  169 bits (625),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 122/304 (41%), Positives = 196/304 (65%), Gaps = 12/304 (3%)

Query  3    ETVLSVKGLQKAIGKKPIIHDITFDVFAGEVFGFLGPNGAGKTTTIRMLVGLAKADGGDI  62
            E ++  + L K   K   + DI + V  G V+GFLGPNGAGK+TT++ML+GLAK+  G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   RIGGISLQEQFPQAI-AQVGCIVENPELYKFLTGRENLEQFARMSGGITAERIEEIVRFV  121
             I G  L+E+   +I  ++G ++E+P  Y  LTG EN+    R+ + +    ++E +++V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIV  120

Query  122  DLERAIDDKVKTYSLGMRQRLGIAQALLHRPKILILDEPTNGLDPAGIRELRQFIRKLAE  181
             LE   + KV  YSLGM+QRLGIA A++  PK+LILDEPTNGLDPAGI E+R++I+ L+E
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  182  EEGLAVFISSHLLSEIEMMCDRVAIISQGKVISVGLVKELMEQFADQVDWTIPSSHIQKA  241
              G++V+ISSHLLSEI+ +   ++II++G ++  + +KEL ++  +Q + +I + ++  A
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR--GQSQIAIKTKNVVSA  238

Query  242  EEILRN---LPAVTEVWVVSEERLKSRMDVEKVSEANLALVNGGIPVMGIATKTVTLEDL  298
            + +L     ++ + +  +  E+ LK   DV K++     LV++ I V  I     +LED+
Sbjct  239  QKLLNTKGYMSLIQDGYLTIEN-LKDS-DVAKING---MLVHSNIDVFRIEEHKKSLEDI  293

Query  299  FLTL  302
            FL L
Sbjct  294  FLEL  297

377) CLD_2970 in NC_010516


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  168 bits (623),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 105/212 (50%), Positives = 156/212 (74%), Gaps = 9/212 (4%)

Query  8    TKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIFDNH  67
            +K+  K+F+    V++I + V + +VYG+LGPNGAGKST LKML G+ +PT G+I +   
Sbjct  11   SKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  68   HWTRKD----LVSIGALIEAPPLYENLTARENLKVRTTLLGLKDSLIDEVLKIVDLTNTG  123
            +   K+    L  IG+LIE+P+ Y +LT+ EN+ +   LL+L    ++E LKIV L N  
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  124  KKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGLDPIGIQELRELIRSFP-KQGITV  182
            +K  +++S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P K G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  183  ILSSHILAEVQLIADHIGIISNGILGYEAKIN  214
            ++SSH+L+E++ IA  IGII++G L ++  I+
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

378) CBF_1645 in NC_017297


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  168 bits (620),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 104/212 (50%), Positives = 159/212 (75%), Gaps = 9/212 (4%)

Query  8    TKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKI-IFDK  66
            +K+  K+F+    V++I + V + +VYG+LGPNGAGKST LKML G+ +PT G+I I++K
Sbjct  11   SKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  67   HHWTRKD---LVSIGAFIEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTG  123
            +   ++    L  IG++IE+P+ Y +LT+ EN+ +   LL+L    ++E LKIV L N  
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  124  KKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGLDPIGIQELRELIRSFPKQ-GITV  182
            +K  +++S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P + G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  183  ILSSHILAEVQLIADHIGIISNGILGYEAKIN  214
            ++SSH+L+E++ IA  IGII++G L ++  I+
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

379) CLI_1663 in NC_009699


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  168 bits (620),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 104/212 (50%), Positives = 159/212 (75%), Gaps = 9/212 (4%)

Query  8    TKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKI-IFDK  66
            +K+  K+F+    V++I + V + +VYG+LGPNGAGKST LKML G+ +PT G+I I++K
Sbjct  11   SKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  67   HHWTRKD---LVSIGAFIEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTG  123
            +   ++    L  IG++IE+P+ Y +LT+ EN+ +   LL+L    ++E LKIV L N  
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  124  KKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGLDPIGIQELRELIRSFPKQ-GITV  182
            +K  +++S+GMKQRLGIA+A+++ PKLLILDEPTNGLDP GI+E+RELI+S+P + G+TV
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  183  ILSSHILAEVQLIADHIGIISNGILGYEAKIN  214
            ++SSH+L+E++ IA  IGII++G L ++  I+
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

380) LMOSLCC2540_0756 in NC_018586


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  168 bits (623),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 115/272 (43%), Positives = 185/272 (69%), Gaps = 6/272 (2%)

Query  28   VMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIR-KNFTEAMRGLGSIVEN  86
            V  G V+GFLGPNGAGK+TT++M++GL KPT G I I GK++  KN    ++++GS++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  87   LEFYTFLTGQENLAYFARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQ  146
              +Y  LTG EN++   R+   + K  ++E   +V LE++ N +VS YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  147  ALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAI  206
            A++  PKLLILDEPTNGLDP+GI+E+R++I++L+ + G++VL+SSHLLSEI+ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  207  MTDGTIIKTDQVSHLLS-SRAQLRWLATPFEQAKAFLESVTEVE-VDGEYLVTAV--NEH  262
            + +G ++  D + +L + +++Q+   +     A+ +L++   +  +++ YL      + +
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  263  SAEWNEQLVAKGIQVHEIDKKKPSLEDLFLEL  294
             A  N  LV   I+V  I+  K SLED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

381) BC5400 in NC_004722


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  168 bits (620),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 108/243 (45%), Positives = 161/243 (67%), Gaps = 2/243 (0%)

Query  1    MTTILSVRDLKKVIGKKTLVENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGT  60
            M  I+  + L K   K   V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DML  242
             +L
Sbjct  240  KLL  242

382) spaF in NC_014479


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (618),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 105/216 (49%), Positives = 166/216 (77%), Gaps = 5/216 (2%)

Query  4    VLLETKSLTKKFGKETAVADVSLTVQKNSIYGLLGPNGAGKSTTLKILTGILRKTSGEIL  63
            +++ T+ L+K + K   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  64   FDG----HKWKRSDLQTIGSLIEAPPLYDNLTAFENVKVHATLLGLSEDRIHSVLKTVDM  119
            + G    +K + S L+ IGSLIE+P+ Y++LT++EN+ +   LL+L+   ++  LK V +
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  120  QHAGKKRAGQFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRDLIRSFPQE-  178
            ++  +K+ +Q+S+GM+QRLGIA+A+++ PKLLILDEPTNGLDP GI+E+R+LI+S+P+  
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  179  GITVILSSHILSEVEQIAdhigiiidghLGYQGEIN  214
            G+TV++SSH+LSE++QIA  IGII +G+L +Q+ I+
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

383) GYO_3691 in NC_016047


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (617),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 105/216 (49%), Positives = 166/216 (77%), Gaps = 5/216 (2%)

Query  4    VLLETKSLTKKFGKETAVSDVSLTVQKNSIYGLLGPNGAGKSTTLKILTGILRKTSGEVF  63
            +++ T+ L+K + K   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G++ 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  64   FDG----HKWKRSDLQNIGSLIETPPLYDNLTAFENVKVHATLLGLSEDRIHSVLKTVDM  119
            + G    +K + S L++IGSLIE+P+ Y++LT++EN+ +   LL+L+   ++  LK V +
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  120  EHAGKKRAGQFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRDLIRSFPQE-  178
            E+  +K+ +Q+S+GM+QRLGIA+A+++ PKLLILDEPTNGLDP GI+E+R+LI+S+P+  
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  179  GITVILSSHILSEVEQIADhigiiigghlgYQGEIN  214
            G+TV++SSH+LSE++QIA  IGII  G+L +Q+ I+
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

384) SSU05_0946 in NC_009442


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (618),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 124/296 (42%), Positives = 212/296 (72%), Gaps = 6/296 (2%)

Query  1    MDIHLNHISKKYGNRIILNDVTIRIPSGKIYGFIGANGAGKTTTMKILTGLLPATKGNIY  60
            M I+ +++SK Y + + ++D+ +R+P G +YGF+G+NGAGK+TT+K+L GL  +T+GNI 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDGVSLNDLKNQESI---IGAFISTPSYYKNLTAYENLAIIQEVLKKPQEEIDRVLNLVG  117
            + G  LN+ KN+ SI   IG++I +PSYY +LT+ EN++I+Q +L  P+ +++  L++V 
Sbjct  63   ILGKELNE-KNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  118  LSEVRNKVVSSFSFGMKQRLGLAFAFLNNPDILVLDEPTNGLDPKGIVEIRELLYRLAKE  177
            L + +NK VS +S+GMKQRLG+A A+++ P +L+LDEPTNGLDP GI EIREL+  L+  
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  178  EGKtifisshhiseietiADMVGIIHDGELIFEGTLSELYNKRDSSYLFEVANPDVFEHI  237
             G T++ISSH +SEI+ IA  +GII++GEL+F++++ EL N+ +S   +   N    + +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  238  LKVRDISFIRKESHFEINSYK-KDIPNLIKFIVQEGIDILEVSPN-KNLERIFLDL  291
            L+ ++   + +++ + I++ K  D++++   +V+  ID++ +  + K+LE IFL+L
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

385) SSU98_0954 in NC_009443


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (618),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 124/296 (42%), Positives = 212/296 (72%), Gaps = 6/296 (2%)

Query  1    MDIHLNHISKKYGNRIILNDVTIRIPSGKIYGFIGANGAGKTTTMKILTGLLPATKGNIY  60
            M I+ +++SK Y + + ++D+ +R+P G +YGF+G+NGAGK+TT+K+L GL  +T+GNI 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDGVSLNDLKNQESI---IGAFISTPSYYKNLTAYENLAIIQEVLKKPQEEIDRVLNLVG  117
            + G  LN+ KN+ SI   IG++I +PSYY +LT+ EN++I+Q +L  P+ +++  L++V 
Sbjct  63   ILGKELNE-KNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  118  LSEVRNKVVSSFSFGMKQRLGLAFAFLNNPDILVLDEPTNGLDPKGIVEIRELLYRLAKE  177
            L + +NK VS +S+GMKQRLG+A A+++ P +L+LDEPTNGLDP GI EIREL+  L+  
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  178  EGKtifisshhiseietiADMVGIIHDGELIFEGTLSELYNKRDSSYLFEVANPDVFEHI  237
             G T++ISSH +SEI+ IA  +GII++GEL+F++++ EL N+ +S   +   N    + +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  238  LKVRDISFIRKESHFEINSYK-KDIPNLIKFIVQEGIDILEVSPN-KNLERIFLDL  291
            L+ ++   + +++ + I++ K  D++++   +V+  ID++ +  + K+LE IFL+L
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

386) SSUD12_1307 in NC_017621


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (618),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 124/296 (42%), Positives = 212/296 (72%), Gaps = 6/296 (2%)

Query  1    MDIHLNHISKKYGNRIILNDVTIRIPSGKIYGFIGANGAGKTTTMKILTGLLPATKGNIY  60
            M I+ +++SK Y + + ++D+ +R+P G +YGF+G+NGAGK+TT+K+L GL  +T+GNI 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDGVSLNDLKNQESI---IGAFISTPSYYKNLTAYENLAIIQEVLKKPQEEIERVLNLVG  117
            + G  LN+ KN+ SI   IG++I +PSYY +LT+ EN++I+Q +L  P+ +++  L++V 
Sbjct  63   ILGKELNE-KNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  118  LSEVRNKVVSSFSFGMKQRLGLAFAFLNNPDILVLDEPTNGLDPKGIVEIRELLYRLAKE  177
            L + +NK VS +S+GMKQRLG+A A+++ P +L+LDEPTNGLDP GI EIREL+  L+  
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  178  EGKtifisshhiseietiADMVGIIHDGELIFEGTLSELYNKRDSSYLFEVANPDVFEHI  237
             G T++ISSH +SEI+ IA  +GII++GEL+F++++ EL N+ +S   +   N    + +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  238  LKVRDISFIRKESHFEINSYK-KDIPNLIKFIVQEGIDILEVSPN-KNLERIFLDL  291
            L+ ++   + +++ + I++ K  D++++   +V+  ID++ +  + K+LE IFL+L
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

387) SSUSC84_0854 in NC_012924


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (618),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 124/296 (42%), Positives = 212/296 (72%), Gaps = 6/296 (2%)

Query  1    MDIHLNHISKKYGNRIILNDVTIRIPSGKIYGFIGANGAGKTTTMKILTGLLPATKGNIY  60
            M I+ +++SK Y + + ++D+ +R+P G +YGF+G+NGAGK+TT+K+L GL  +T+GNI 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDGVSLNDLKNQESI---IGAFISTPSYYKNLTAYENLAIIQEVLKKPQEEIDRVLNLVG  117
            + G  LN+ KN+ SI   IG++I +PSYY +LT+ EN++I+Q +L  P+ +++  L++V 
Sbjct  63   ILGKELNE-KNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  118  LSEVRNKVVSSFSFGMKQRLGLAFAFLNNPDILVLDEPTNGLDPKGIVEIRELLYRLAKE  177
            L + +NK VS +S+GMKQRLG+A A+++ P +L+LDEPTNGLDP GI EIREL+  L+  
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  178  EGKtifisshhiseietiADMVGIIHDGELIFEGTLSELYNKRDSSYLFEVANPDVFEHI  237
             G T++ISSH +SEI+ IA  +GII++GEL+F++++ EL N+ +S   +   N    + +
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKL  241

Query  238  LKVRDISFIRKESHFEINSYK-KDIPNLIKFIVQEGIDILEVSPN-KNLERIFLDL  291
            L+ ++   + +++ + I++ K  D++++   +V+  ID++ +  + K+LE IFL+L
Sbjct  242  LNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

388) HBHAL_1859 in NC_017668


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (618),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 115/281 (41%), Positives = 194/281 (70%), Gaps = 4/281 (1%)

Query  21   IHGISLDIYPGEVFGFLGPNGAGKTTMIRMLVGLMKMSEGEIYIQGHHI-QRDFEKAIAQ  79
            + +I L +  G V+GFLGPNGAGK+T ++ML+GL K ++G+I I G ++ +++    + +
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  80   VGGIIENPEMYSYLTGLENLKHYARLTPKDIPKKRLEEIIKLVGLEKRIDEKVKGYSLGM  139
            +G++IE+P  Y+ LTGLEN+    RL   D+PKK ++E +K+V LE++ + KV  YSLGM
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL--DLPKKNVNEALKIVRLENQKNKKVSQYSLGM  137

Query  140  RQRLGIAQALLHSPSLLILDEPTNGLDPAGIREIRQYIRRIAHEENLAVFVSSHLLSEMQ  199
            +QRLGIA A++  P LLILDEPTNGLDPAGI EIR+ I+ +++   ++V++SSHLLSE++
Sbjct  138  KQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEID  197

Query  200  LMCDRIGIIQHGRLIRVEKIQDLVSENIDLTVKLKAAPVEKAFQLLTDQSWEPEKQDDWi  259
             +   IGII+HG L+  + I++L  +  +  + +K+  V  A +LL  ++  +  QD+ +
Sbjct  198  QIATSIGIINHGELVFQDSIKEL-HNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYL  256

Query  260  eltvseeeeipevaelliSNQIKLYQIYSNVQTLEDTFLEL  300
             +    + +++ +  +L+ ++I +++I  + ++LED FLEL
Sbjct  257  TIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

389) ftsH in NC_018693


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (617),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 100/211 (48%), Positives = 151/211 (72%), Gaps = 2/211 (0%)

Query  14   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGTVSIGGYSIKENFR-EAMRQ  72
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G ++I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  73   IGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAQMVHLDERIHDKVKTYSLGMK  132
            IGS++E+P  Y  LTG EN+    R+L D++   + E  ++V+L+++ + KV  YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  133  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHTLVKEENMSVFISSHLLSEVQM  192
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I +L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  193  ICDRVAIIHKGKMITVAKVEELIKTASDRVE  223
            I   ++II+ G ++    + EL + +  ++ 
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIA  229

390) Arth_0386 in NC_008541


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (617),  Expect = 7e-43, Method: Compositional matrix adjust.
 Identities = 97/233 (42%), Positives = 161/233 (70%), Gaps = 7/233 (3%)

Query  8    VELAIETRGLSKRFGHQLAVDGVNLAVPKGSVFGFLGPNGSGKTTTIRMMLGLAAATEGS  67
            +E+ I T+ LSK +   + V +++L VP+G+V+GFLGPNG+GK+TT++M+LGLA +T+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  68   VSVLGLAMPDRFH-EVLPRVGALVEGPAFYPFLSGAANLRRLDAADPYAATSTrrarvea  126
            +++LG  + ++ +  +L  +G+L+E+P++Y  L+G  N+  ++     +  +   A    
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  127  alervGLTHAAGKKVRAYSLGMKQRLGIANALLSPRELLVLDEPTNGLDPQGTREVRSLV  186
                  L +   KKV  YSLGMKQRLGIA A++    LL+LDEPTNGLDP G  E+R L+
Sbjct  121  R-----LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  187  RSLAAD-GATVFVSSHLLAEVEQICTHAAVMSAGRLVAQGTLAELRDAGKTRI  238
            +SL+   G TV++SSHLL+E++QI T  ++++ G LV Q+++ EL++ G+++I
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQI  228

391) BACI_c53950 in NC_014335


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (616),  Expect = 7e-43, Method: Compositional matrix adjust.
 Identities = 114/280 (41%), Positives = 181/280 (65%), Gaps = 3/280 (1%)

Query  20   VENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKETEGTISIGGYSIKENFR-EAMRQ  78
            V +I + V QG V+GFLGPNGAGK+TT++ML+GL K T+G I+I G  ++E+ R   +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIVENPELYTYLTGWENLKQFARMLGGISDERIIEIAHMVHLDERIHDKVKTYSLVMK  138
            IGS++E+P  Y  LTG EN+    R+L+ ++   + E   +V+L+++ + KV  YSL MK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLVKEENMSVFISSHLLSEVQM  198
            QRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L     M+V+ISSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  ICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAKDMLVDAEEVREVSIEGDRL  258
            I   ++II+ G ++    + EL + +  ++      +  A+ +L ++     +  +G   
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL-NTKGYMSLIQDGYLT  257

Query  259  LCRMHISSISNWNKTFVENGIDVHSVKALVFTLEDLFIEL  298
            +  +  S +++ N  +V++ IDV  +     +LED+F+EL
Sbjct  258  IENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

392) BCG9842_B5428 in NC_011772


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (616),  Expect = 7e-43, Method: Compositional matrix adjust.
 Identities = 120/299 (41%), Positives = 189/299 (64%), Gaps = 3/299 (1%)

Query  1    MTTILSVRDLKKVIGKKTLVEDISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLITATEGT  60
            M  I+  + L K   K   V DI + V QG V+GFLGPNGAGK+TT++ML+GL  +T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKDNFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEM  119
            I+I G  ++++ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DMleaaeevrevsvegerllCRMDIASISSWNKHLVENEIDVHSVKELVFTLEDLFIEL  298
             +L++   +  +      +   +  + ++  N  LV+++IDV  + E   +LED+F+EL
Sbjct  240  KLLNTKGYMSLIQDGYLTIE-NLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

393) BMB171_C4994 in NC_014171


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (616),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 107/243 (45%), Positives = 160/243 (66%), Gaps = 2/243 (0%)

Query  1    MTTILSVRDLKKVIGKKTLVENISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLIKATEGT  60
            M  I+  + L K   K   V +I + V QG V+GFLGPNGAGK+TT++ML+GL K+T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKENFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDISDERIIEIAEM  119
            I+I G  ++E+ R   +++IGS++E+P  Y  LTG EN+    R+L D++   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEALIKTASDRVEWIVTPISKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    +  L + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DML  242
             +L
Sbjct  240  KLL  242

394) EUBELI_20033 in NC_012780


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (616),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 119/297 (41%), Positives = 191/297 (65%), Gaps = 8/297 (2%)

Query  1    MQTSNLTKQYGRHRAVDDVNMHIKKGAIYGFIGRNGAGKTTCLKMISGLSTPSYGEIEMF  60
            ++T  L+K+Y +   V D+++++ +GA+YGF+G NGAGK+T LKM+ GL+ P+ G+I+++
Sbjct  5    IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINIL  64

Query  61   G--YKGKDLQKVRSRVGCLIEAPGLYGNMSAYDNLNIKCKLTGIKKKGYIEELLKTVGLD  118
            G   + K+   +   +G LIE+P+ YG++++ +N+ I  +L ++ KK  ++E LK V L+
Sbjct  65   GKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRLE  123

Query  119  TVGEKKTKHYSLGMKQRLGIALALVGEPDLLILDEPINGLDPQGIVEVRETIQKLAKERG  178
               +KK  +YSLGMKQRLGIA+A++  P LLILDEP NGLDP GI E+RE I+ L+   G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  179  MTICISSHILEELSKLATDYGIIHNGCLVQELTREELMKKCSERIELTLDNPKQAIPVLD  238
            MT+ ISSH+L E+ ++AT  GII++G LV + +  EL ++   +I +   N   A  +L+
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLN  243

Query  239  DMGFNSYQVIDKEHIHIFERLGESASLNME--LAKAGIPVKGISITSEELENYFLRL  293
              G+ S  +I+   + I E L +S   +++  L  + I V  I      LE+ FL L
Sbjct  244  TKGYMS--LIQDGYLTI-ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

395) MCP_1237 in NC_013665


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  167 bits (616),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 121/300 (41%), Positives = 192/300 (64%), Gaps = 12/300 (4%)

Query  4    IETHGLTKDYGNLVAVKDLDLTVKPGIVYGFLGPNGAGKSTTINMLMGFIRPTAGSASIM  63
            I T+ L+K+Y ++  VKD+DL V  G VYGFLGPNGAGKSTT++ML+G+ +PT G+ +I+
Sbjct  5    IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINIL  64

Query  64   G--LDAKTQHLEIKKITGYLPERPAFYDDLSGRGNLEYFGRLIGVEELDGRIVELLKTVG  121
            G  L+ K  ++ I K  G L E P++Y++L+G  N+    RL+++      + E LK V 
Sbjct  65   GKELNEKN-RISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP--KKNVNEALKIVR  121

Query  122  LEGRGNDRVGTYSHGMRQRLGIAVALLGSPKLLILDEPTTGLDPQGSHDIREVIKKLKSE  181
            LE + N +V+ YS GM+QRLGIA+A++  PKLLILDEPT GLDP G ++IRE+IK L   
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  182  -NVTIFLSSHILHEVQDISDVVGIVKKGRLIVERPIEEFLRSTEGNMPVIEIMAPRFEDA  240
              +T+++SSH+L E+++I+  +GI++ G L+ + +I E+    +++   I I +     A
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQ---IAIKTKNVVSA  238

Query  241  HLDLVKKIKGVGGVTRNNGFIDVTVESPALAEDINIALVNAGCRVRGIREKMPTLEDAFL  300
            +  L++  KG  ++  ++G++ +     +    IN  LV++   V  I E   +LED FL
Sbjct  239  Q-KLLNT-KGYMSLI-QDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

396) bcrA in NC_018664


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  166 bits (615),  Expect = 9e-43, Method: Compositional matrix adjust.
 Identities = 125/308 (41%), Positives = 201/308 (66%), Gaps = 20/308 (6%)

Query  3    DTILRTKNLTKKYHSQFAVNNVNIEVRQGDIYGLVGKNGAGKTTLIRMITGLTIPTNGEI  62
            + I+RT+ L+K Y+  F V+++++ V QG +YG++G NGAGK+T ++M+ GL+ PT+G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   ELFRETSEKGLN-KSRVRT----GSMVETPSFFPYLSARKNLEYYRIQKGIVE--KDCVE  115
            +++     K LN K+R+      GS++E+PS++  L++   LE   I + +++  K  V+
Sbjct  62   NIL----GKELNEKNRISILKDIGSLIESPSYYGHLTG---LENMTIMQRLLDLPKKNVN  114

Query  116  EVIKITGLEDAGNKKFKNFSLGMKQRLGIAFAIMGNPDLLILDEPVNGLDPTGIVELREL  175
            E +KI  LE+  NKK  ++SLGMKQRLGIA AIM  P LLILDEP NGLDP+GI E+REL
Sbjct  115  EALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIREL  174

Query  176  LIKLNREKNTTIIISSHILGELSQLATIYGFIDKGKIVEQISAEELEEKCRVCLSIKVDD  235
            +  L      T++ISSH+L+E+ Q+AT  G+I+ G +V Q S  EL+++ +  ++IK   
Sbjct  175  IKSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIK---  231

Query  236  TTKSVVIIEKELNCNEYEVLNNNEIRLYEYIDTPEV--VVKALVENGIMVSSVNQKGANL  293
             TK+VV  +K LN + Y  L ++     E +  ++V  +   LV++ I V  +++   +L
Sbjct  232  -TKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSL  290

Query  294  EDYFIKLV  301
            ED F+ L+
Sbjct  291  EDIFLELL  298

397) BTG_21385 in NC_018500


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  165 bits (610),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 120/299 (41%), Positives = 188/299 (63%), Gaps = 3/299 (1%)

Query  1    MTTILSVRDLKKVIGKKTLVEDISFDVKQGEVFGFLGPNGAGKTTTIRMLVGLITATEGT  60
            M  I+  + L K   K   V DI + V QG V+GFLGPNGAGK+TT++ML+GL  +T+G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISIGGYSIKDNFR-EAMRQIGSIVENPELYTYLTGWENLKQFARMLGDTSDERIIEIAEM  119
            I+I G  ++++ R   +++IGS++E+P  Y  LTG EN+    R+L D +   + E   +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VHLDERIHDKVKTYSLGMKQRLGIAQALLGNPKLLILDEPTNGLDPAGIRELREFIHKLV  179
            V+L+++ + KV  YSLGMKQRLGIA A++  PKLLILDEPTNGLDPAGI E+RE+I  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEENMSVFISSHLLSEVQMICDRVAIIHKGKMITVAKVEELIKTASDRVEWIVTPISKAK  239
                M+V+ISSHLLSE++ I   ++II+ G ++    + EL + +  ++      +  A+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  DMleaaeevrevsvegerllCRMDIASISSWNKHLVENEIDVHSVKELVFTLEDLFIEL  298
             +L++   +  +      +   +  + ++  N  LV+++IDV  + E   +LED+F+EL
Sbjct  240  KLLNTKGYMSLIQDGYLTIE-NLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

398) Desmer_3151 in NC_018515


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  165 bits (611),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 115/287 (41%), Positives = 189/287 (66%), Gaps = 14/287 (4%)

Query  22   VKGINLTLQSSQIYGFLGPNGAGKTTTIRMIVGLIKPTQGTVKICGHSVAH-EFVKALSN  80
            VK+I+L +  + +YGFLGPNGAGK+TT++M++GL KPTQG ++I G  + + + +  L +
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   VGCIIESPDMYQYLTGMENLLQFAGMNK--TISHQRIKDVIEMVGLKHRVNDKVSTYSLG  138
            +G +IESP  Y  LTG+EN+   + M++   ++ + +++ + +V L ++ N KVS YSLG
Sbjct  80   IGSLIESPSYYGHLTGLENM---TIMQRLLDLPKKNVNEALKIVRLENQKNKKVSQYSLG  136

Query  139  MRQRLGIAQAIISKPKLLILDEPTNGLDPAGITEFRNLIRKLAYEEGMTVFVSSHILLEI  198
            M+QRLGIA AI+  PKLLILDEPTNGLDPAGI E+R+LI+ L+   GMTV++SSH+L EI
Sbjct  137  MKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEI  196

Query  199  QQMCDMVSIIKQGSVVKTANVQDLL-QDNDKIEWQLSDPDAAISLLREH---WSIQATQL  254
            +Q+   ++II++G +V   ++++L  +++ +I  +  +  +A  LL        IQ   L
Sbjct  197  DQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYL  256

Query  255  KKNTISANIGQHSLEKLNEFLISQGLALTYCSAMRNTLEDLFLDLTV  301
              + +  +     + K+N  L+   + +      +++LED+FL+L V
Sbjct  257  TIENLKDS----DVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLV  299

399) Mtc_1578 in NC_017034


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  165 bits (608),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 98/218 (45%), Positives = 156/218 (72%), Gaps = 4/218 (1%)

Query  4    IETHGLTRDYGKVVAVKDLSLSVKPGTVYGFLGPNGAGKSTTIHMLMGFIKPTSGSASVM  63
            I T+ L+++Y K+  VKD+ L V  G+VYGFLGPNGAGKSTT+ ML+G+ KPT G+ +++
Sbjct  5    IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINIL  64

Query  64   GYDIK-TQHYEIRKITGYLPERPAFYDDMSGRGNLEYFGKLIGIEDVEERALELLKLVGL  122
            G +++  ++  I K  G L E P++Y++++G  N+    +L+++   +    E LK+V L
Sbjct  65   GKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVN--EALKIVRL  122

Query  123  EGRGEDRVKAYSHGMRQRLGIAIALLGNPKLLILDEPTTGLDPQGSHDIRELIKKLKGE-  181
            E + + +V  YS GM+QRLGIA+A++  PKLLILDEPT GLDP G ++IRELIK L    
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  182  NVTIFLSSHILHEVQEVSDVVGIIKDGRLIVEQSISEF  219
             +T+++SSH+L E+++++  +GII++G L+ ++SI E+
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

400) GY4MC1_1744 in NC_014650


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  164 bits (605),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 119/279 (43%), Positives = 195/279 (70%), Gaps = 4/279 (1%)

Query  22   IKGISFELKEGEVFGFLGPNGAGKTTTIRMLVGLIKPTSGRISICGYDL-ERQFTKAIRH  80
            +K+I + + +G V+GFLGPNGAGK+TT++ML+GL KPT G I+I G +L E++    +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   IGCIVENPELYPYLSGWENLEHFARMVPDIPKKRINEVVELVGLQNRIHDRVSTYSLGMR  140
            IG ++E+P  Y  L+G EN+    R++ D+PKK +NE + +V L+N+ + +VS YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  141  QRLGIAQALLGKPKVLILDEPTNGLDPVGIREMREFIRFLAETEGlsvlvsshllsEIQL  200
            QRLGIA A++  PK+LILDEPTNGLDP GI E+RE+I+ L+E  G++VL+SSHLLSEI+ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  201  MCDRVAIMAKGAMLRIDTVEHLL-KEQARVVWKAEPLEAAKTVLAAEASMVRTDGDTL-I  258
            +   ++I+  G ++  D++ +L  + Q+++  K+  + +A+ +L + + M   +++ L I
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  259  TPYEPNKLSVWNKKLVEAGIDVHEIQPKLPTLEDLFIEL  297
                 + ++  N  LV++ IDV  I+    +LED+F+EL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

401) CD630_03660 in NC_009089


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  163 bits (601),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 128/282 (46%), Positives = 195/282 (70%), Gaps = 11/282 (3%)

Query  4    QIILATKQLTKKYGDVTAVEKINLNVKKGRIYGLLGRNGAGKTTIMKMVLGLISISSGEV  63
            ++I+ T++L+K Y  +  V  I+L V +G +YG+LG NGAGK+T +KM+LGL   + G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   EIFGKQLKGNEK-DVYTRIGSIIETPSFYSYLTGTENLEIFSRLRGTIKKNAVKSALEVV  122
            +I+GK+L+ +++  +   IGS+IE+PS+Y+ LTG EN+ I  RL +  KKN V+ AL +V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIV  120

Query  123  GLPYKDKKPFSSYSLGMKQRLGIANAILNDPEILILDEPTNGLDPVGIVEIRKFLQSLCH  182
             L  + +K  S YSLGMKQRLGIA AI++ P +LILDEPTNGLDP GI EIR +++SL +
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  183  EQGKTiiisshilseisllADDIGIIHDGHLLKEISMNELEEKNKKYIEIKVNNVPMATQ  242
              G T++ISSH+LSEI  +A  IGII++G+L+ + S++EL+++ +  I IK +NV  A +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

Query  243  LLENVMKCKNY-SVTDKTCIEIYDEALDTEEIA--NCMVSHG  281
            LL+     K Y S+ +   + I  E L   ++A  N M+ H+
Sbjct  241  LLN----TKGYMSLIQDGYLTI--ENLKDSDVAKINGMLVHS  276

402) GYO_0456 in NC_016047


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  163 bits (601),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 123/304 (41%), Positives = 199/304 (66%), Gaps = 10/304 (3%)

Query  1    MAYIVQTNGLTKTYQGKEVVSNVSMHIKKGEIYGFLGPNGAGKTTIMKMLTSLVKPTSGE  60
            M  I++T+ L+K Y+    V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ISILGNKLTHTS-YEVLGNIGSMIEYPIFYENLSAAENLDLHCEYMGYHNKKAIQEVLDM  119
            I+ILG+ L + +   +L +IGS+IE P +Y +L++ EN+ +    ++   KK ++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKI  119

Query  120  VNLKQIDKKPVKTFSLGMKQRLGIARAILTKPDLLILDEPVNGLDPIGIKKIRQLFQVLS  179
            V L +  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI  IR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTllisshllseieQIADTIGVIRDGRLLEEVSMEDVRGQNTEYIELVTPNQTRAC  239
              YGMT+LISSHLLSEI+QIA +IG+I +G L+ + S+ +++ +    I +    +T+  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI----KTKNV  235

Query  240  FVLEKELHVTNFKILNEKTIRIYEAEVSQSAISKA---LILNDVDIESMNKKYTSLEDYF  296
               +K L+   +  L +      E ++ +S ++K    L+ +++D+  ++    SLED F
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIE-NLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

Query  297  INLI  300
            ++L+
Sbjct  295  LELL  298

403) Geoth_1824 in NC_015660


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  163 bits (602),  Expect = 9e-42, Method: Compositional matrix adjust.
 Identities = 119/279 (43%), Positives = 194/279 (70%), Gaps = 4/279 (1%)

Query  22   IKGISFELKEGEVFGFLGPNGAGKTTTIRMLVGLIKPTSGRISICGYDL-ERQFTKAIRH  80
            +K+I + + +G V+GFLGPNGAGK+TT++ML+GL KPT G I+I G +L E++    +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   IGCIVENPELYPYLSGWENLEHFARMVPDIPKKRINEVVELVGLQNRIHDRVSTYSLGMR  140
            IG ++E+P  Y  L+G EN+    R++ D+PKK +NE + +V L+N+ + +VS YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  141  QRLGIAQALLGKPKVLILDEPTNGLDPVGIREMREFIRFLAETEGlsvlvsshllsEIQL  200
            QRLGIA A++  PK+LILDEPTNGLDP GI E+RE+I+ L+E  G++VL+SSHLLSEI+ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  201  MCDRVAIMAKGAMLRIDTVEHLL-KEQARVVWKVEPLEAAKTVLAAEASMVRTDGDTL-I  258
            +   ++I+  G ++  D++ +L  + Q+++  K   + +A+ +L + + M   +++ L I
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  259  TPYEPNKLSVWNKKLVEAGIDVHEIQPKLPTLEDLFIEL  297
                 + ++  N  LV++ IDV  I+    +LED+F+EL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

404) AXY_04780 in NC_018704


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  162 bits (599),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 105/246 (43%), Positives = 184/246 (75%), Gaps = 4/246 (1%)

Query  3    EYILRTNALTKKYKNDYALKNVDVTIKRGEIYGLIGQNGAGKTTMLRLITGLAFPTNGSI  62
            E I+RT+ L+K Y++ + +K++D+ + +G +YG++G NGAGK+T L+++ GLA PT+G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   ELFENN-DRREMTAAHKRMGAIIENPALFPNMTAYENLEV-QRLQRGIPGRECIEKALKL  120
            +++ ++ + ++  +  K +G++IE+P+ + ++T+ EN+ + QRL  ++P ++ ++ ALK+
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKN-VNEALKI  119

Query  121  VGLEGTGKKKVKNFSLGMKQRLGLAIALLSDPEFIILDEPTNGLDPMGIVEMRELLKKLN  180
            V LE   +KKV ++SLGMKQRLG+A+A++  P ++ILDEPTNGLDP GI E+REL+K L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  181  REKGLTVLISSHILSELYQLATKFGIIHQGQLLEEISAGELNDKCRQYLRIKVDEPAKGV  240
               G+TVLISSH+LSE+ Q+AT +GII++G+L+ + S  EL+++ +  + IK  +   + 
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  241  NVLEEK  246
            ++L+ K
Sbjct  240  KLLNTK  245

405) CLM_2146 in NC_012563


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  161 bits (594),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 104/234 (45%), Positives = 165/234 (71%), Gaps = 6/234 (2%)

Query  1    MNNIIEVKNLSKNIKGKTIIENMNFNIEKGDIYGFVGPNGAGKTTMIRLLTGLIKPTKGE  60
            M+ II  + LSK+ +    + ++++ + +G +YGF+GPNGAGK+T +++L GL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILINGIDVN-KDRKGALLNIGAIVECPIFFEYMTGREILKNLVRLHPNIPKEEREKRVDE  119
            I I G ++N K+R + L +IG+++E P ++  +TG E +  + RL  ++PK    K V+E
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPK----KNVNE  115

Query  120  VLKLVDLKHRENDKVSSYSLGMKQRLGIAQALLGKPEIIILDEPANGLDPIGIKDLRDII  179
             LK+V L ++ N KVS YSLGMKQRLGIA A++  P ++ILDEP+NGLDP GI ++R++I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  180  LKLNRELKITFLVSSHLLDELQKFSNKIIIINHGRLKFKGSLEELLSMGDGNIE  233
              L     +T L+SSHLL E+++++  I IINHG L F++S+ EL + G+++I 
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA  229

406) CLB_1867 in NC_009697


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  161 bits (594),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 104/234 (45%), Positives = 165/234 (71%), Gaps = 6/234 (2%)

Query  1    MNNIIEVKNLSKNIKGKTIIENMNFNIEKGDIYGFVGPNGAGKTTMIRLLTGLIKPTKGE  60
            M+ II  + LSK+ +    + ++++ + +G +YGF+GPNGAGK+T +++L GL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILINGIDVN-KDRKGALLNIGAIVECPIFFEYMTGREILKNLVRLHPNIPKEEREKRVDE  119
            I I G ++N K+R + L +IG+++E P ++  +TG E +  + RL  ++PK    K V+E
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPK----KNVNE  115

Query  120  VLKLVDLKHRENDKVSSYSLGMKQRLGIAQALLGKPEIIILDEPANGLDPIGIKDLRDII  179
             LK+V L ++ N KVS YSLGMKQRLGIA A++  P ++ILDEP+NGLDP GI ++R++I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  180  LKLNRELKITFLVSSHLLDELQKFSNKIIIINHGRLKFKGSLEELLSMGDGNIE  233
              L     +T L+SSHLL E+++++  I IINHG L F++S+ EL + G+++I 
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA  229

407) CBO1929 in NC_009495


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  161 bits (594),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 104/234 (45%), Positives = 165/234 (71%), Gaps = 6/234 (2%)

Query  1    MNNIIEVKNLSKNIKGKTIIENMNFNIEKGDIYGFVGPNGAGKTTMIRLLTGLIKPTKGE  60
            M+ II  + LSK+ +    + ++++ + +G +YGF+GPNGAGK+T +++L GL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILINGIDVN-KDRKGALLNIGAIVECPIFFEYMTGREILKNLVRLHPNIPKEEREKRVDE  119
            I I G ++N K+R + L +IG+++E P ++  +TG E +  + RL  ++PK    K V+E
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPK----KNVNE  115

Query  120  VLKLVDLKHRENDKVSSYSLGMKQRLGIAQALLGKPEIIILDEPANGLDPIGIKDLRDII  179
             LK+V L ++ N KVS YSLGMKQRLGIA A++  P ++ILDEP+NGLDP GI ++R++I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  180  LKLNRELKITFLVSSHLLDELQKFSNKIIIINHGRLKFKGSLEELLSMGDGNIE  233
              L     +T L+SSHLL E+++++  I IINHG L F++S+ EL + G+++I 
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA  229

408) CLC_1874 in NC_009698


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  161 bits (594),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 104/234 (45%), Positives = 165/234 (71%), Gaps = 6/234 (2%)

Query  1    MNNIIEVKNLSKNIKGKTIIENMNFNIEKGDIYGFVGPNGAGKTTMIRLLTGLIKPTKGE  60
            M+ II  + LSK+ +    + ++++ + +G +YGF+GPNGAGK+T +++L GL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILINGIDVN-KDRKGALLNIGAIVECPIFFEYMTGREILKNLVRLHPNIPKEEREKRVDE  119
            I I G ++N K+R + L +IG+++E P ++  +TG E +  + RL  ++PK    K V+E
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPK----KNVNE  115

Query  120  VLKLVDLKHRENDKVSSYSLGMKQRLGIAQALLGKPEIIILDEPANGLDPIGIKDLRDII  179
             LK+V L ++ N KVS YSLGMKQRLGIA A++  P ++ILDEP+NGLDP GI ++R++I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  180  LKLNRELKITFLVSSHLLDELQKFSNKIIIINHGRLKFKGSLEELLSMGDGNIE  233
              L     +T L+SSHLL E+++++  I IINHG L F++S+ EL + G+++I 
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA  229

409) SIR_0291 in NC_022246


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  160 bits (589),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 102/245 (42%), Positives = 171/245 (70%), Gaps = 3/245 (1%)

Query  1    METILNVKHISKRFGQQLALDDVSLTVKQGEIYGLIGKNGAGKTTLIKVITQLIQPNSGT  60
            ME I+  +++SK + + + + D+ L V QG +YG++G NGAGK+T +K++  L +P  G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IALFGSS-TKSEWIHALKRVGSVIESPAAYAHLTAYENLNYCCKIRHIPNANKVIQETLS  119
            I ++G      ++I  LK +GS+IESP+ Y+HLT+ EN+    ++ ++P+  K ++E+L 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK--KNVNEALK  118

Query  120  YVGLTNTGKKKFRDFSLGMKQRLGIAIALLSKPDLMILDEPINGLDPVGIKEFRQLVQQL  179
             V L N  +KK  ++SLGMKQRLGIA+A++  P L+ILDEP NGLDP GI E+R+L++ L
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  180  NDELDMTFIISSHILSELYLVATKFGIIENGKLIKEITKAEFEEESEDYIVLKTNNLAKA  239
             +  +MT +ISSH+LSE+  +AT +GII++G L+ + +  E+++ ++  I +KT+N+  A
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA  238

Query  240  SNILH  244
             ++L+
Sbjct  239  QKLLN  243

410) spaF in NC_017061


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  160 bits (592),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 109/218 (50%), Positives = 158/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNIIETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGMLQQTSGE  60
            M  II T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHTLKRED----LKSIGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G  L+  +    LK IGSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGialallsrpsllilDEPTNGLDPMGIQDLREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A++  P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

411) spaF in NC_017912


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  160 bits (592),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 109/218 (50%), Positives = 158/218 (73%), Gaps = 5/218 (2%)

Query  1    MSNIIETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGMLQQTSGE  60
            M  II T++L K + +   V D+ L V + ++YG+LGPNGAGKSTTLK+L G+ + T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VLFDGHTLKRED----LKSIGSLIEAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEIT  116
            + + G  L+  +    LK IGSLIE+P+ Y++LT+ EN+ +   +L+LP   + E L I 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GLTGTGKKRAGQFSMGMKQRLGialallsrpsllilDEPTNGLDPMGIQDLREFIRSLPG  176
             L    +K+ +Q+S+GMKQRLGIA+A++  P LLILDEPTNGLDP GI+++RE+I+SLP 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  177  Q-GMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEIS  213
            + GMTV++SSHLLSE++QIA  IGII++G L +Q+ I 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

412) SII_0271 in NC_022237


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  160 bits (592),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 104/250 (42%), Positives = 173/250 (70%), Gaps = 4/250 (1%)

Query  1    METILNVKHISKRFGQQLALDDVSLTVKQGEIYGLIGKNGAGKTTLIKVITQLIQPNSGT  60
            ME I+  +++SK + + + + D+ L V QG +YG++G NGAGK+T +K++  L +P  G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IALFGSS-TKSEWIHALKRVGSVIESPAAYAHLTAYENLNYCCKIRHIPNADKVIQETLS  119
            I ++G      ++I  LK +GS+IESP+ Y+HLT+ EN+    ++ ++P+  K ++E+L 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK--KNVNEALK  118

Query  120  YVGLTNTGKKKFRDFSLGMKQRLGIAIALLSKPDLMILDEPINGLDPVGIKEFRQLVQQL  179
             V L N  +KK  ++SLGMKQRLGIA+A++  P L+ILDEP NGLDP GI E+R+L++ L
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  180  NDELDMTFIISSHILSELYLVATKFGIIENGKLIKEITKAEFEEESEDYIVLKTNNLAKA  239
             +  +MT +ISSH+LSE+  +AT +GII++G L+ + +  E+++ ++  I +KT+N+  A
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA  238

Query  240  SNILHDHLGY  249
             ++L+   GY
Sbjct  239  QKLLNTK-GY  247

413) CLK_1385 in NC_010520


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  159 bits (586),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 101/234 (44%), Positives = 163/234 (70%), Gaps = 6/234 (2%)

Query  1    MNNIIEVKNLSKNIKGKTIIENMSFNIEKGDIYGFVGPNGAGKTTMIRLLTDLIKPTKGE  60
            M+ II  + LSK+ +    + ++ + + +G +YGF+GPNGAGK+T +++L +L KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILINGIDINKDRKTALLK-LGAIVECPIFFEYMTGREILKNLVRLHPNIPKEEREKRVNE  119
            I I G ++N   + ++LK +G+++E P ++  +TG E +  + RL  ++PK    K VNE
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPK----KNVNE  115

Query  120  VLELVDLKNRENDKVSTYSLGMKQRLGIAQALLGKPEIIILDEPANGLDPIGIKDLRDII  179
             L +V L N+ N KVS YSLGMKQRLGIA A++  P ++ILDEP+NGLDP GI ++R++I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  180  LKLNSEFKITFLVSSHLLDELQKFSNKIIIINQGRLKFKGSLEELLSMGNGNIE  233
              L   + +T L+SSHLL E+++++  I IIN+G L F++S+ EL + G+++I 
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA  229

414) I653_01255 in NC_020832


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  159 bits (587),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 124/303 (41%), Positives = 195/303 (65%), Gaps = 8/303 (2%)

Query  1    MTYIVQTNGLTKTYQGKEVVSNVSMHIKKGEIYGFLGPNGAGKTTMMKMLTSLVKPTSGE  60
            M  I++T+ L+K Y+    V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IIILGNKFTHTS-YEVLGNIGSMIEYPIFYENLTAEENLDLHCEYMGYHNKKAIQEVLDM  119
            I ILG+ + + +   +L +IGS+IE P +Y +LT+ EN+ +    ++   KK ++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKI  119

Query  120  VNLKQIDKKPVKTFSLGMKQRLGIARAILTKPDLLILDEPVNGLDPIGIKKIRQLFQVLS  179
            V L +  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI  IR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTllisshllseieQIADTIGVIRDGRLLEEVSMEDVRGQNTEYIELVTSNQTKAC  239
              YGMT+LISSHLLSEI+QIA +IG+I +G L+ + S+ +++ +    I +    +TK  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI----KTKNV  235

Query  240  FVLEKELQLTNFKILNEKTIRIYEA--EASQASISKALILNDVDIESMNKKYTSLEDYFI  297
               +K L+   +  L +      E   ++  A I+  L+ +++D+  ++    SLED F+
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KLI  300
             L+
Sbjct  296  ELL  298

415) ycbN in NC_020244


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  159 bits (587),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 124/303 (41%), Positives = 195/303 (65%), Gaps = 8/303 (2%)

Query  1    MTYIVQTNGLTKTYQGKEVVSNVSMHIKKGEIYGFLGPNGAGKTTMMKMLTSLVKPTSGE  60
            M  I++T+ L+K Y+    V ++ +++ +G +YGFLGPNGAGK+T +KML +L KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IIILGNKFTHTS-YEVLGNIGSMIEYPIFYENLTAEENLDLHCEYMGYHNKKAIQEVLDM  119
            I ILG+ + + +   +L +IGS+IE P +Y +LT+ EN+ +    ++   KK ++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKI  119

Query  120  VNLKQIDKKPVKTFSLGMKQRLGIARAILTKPDLLILDEPVNGLDPIGIKKIRQLFQVLS  179
            V L +  +K V  +SLGMKQRLGIA AI+  P LLILDEP NGLDP GI  IR+L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KEYGMTllisshllseieQIADTIGVIRDGRLLEEVSMEDVRGQNTEYIELVTSNQTKAC  239
              YGMT+LISSHLLSEI+QIA +IG+I +G L+ + S+ +++ +    I +    +TK  
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI----KTKNV  235

Query  240  FVLEKELQLTNFKILNEKTIRIYEA--EASQASISKALILNDVDIESMNKKYTSLEDYFI  297
               +K L+   +  L +      E   ++  A I+  L+ +++D+  ++    SLED F+
Sbjct  236  VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL  295

Query  298  KLI  300
             L+
Sbjct  296  ELL  298

416) SCIM_0233 in NC_018073


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  159 bits (586),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 103/250 (42%), Positives = 172/250 (69%), Gaps = 4/250 (1%)

Query  1    METILNVKHISKRFGQQLALDDVSLTVKQGEIYGLIGKNGAGKTTLIKVITQLIQPNSGT  60
            ME I+  +++SK + + + + D+ L V QG +YG++G NGAGK+T +K++  L +P  G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IALFGSS-TKSEWTHALKRVGSVIESPAAYAHLTAYENLNYCCKIRHIPNANKVIQETLS  119
            I ++G      ++   LK +GS+IESP+ Y+HLT+ EN+    ++ ++P+  K ++E+L 
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK--KNVNEALK  118

Query  120  YVGLTNTGKKKFRDFSLGMKQRLGIAIALLSKPDLMILDEPINGLDPVGIKEFRQLVQQL  179
             V L N  +KK  ++SLGMKQRLGIA+A++  P L+ILDEP NGLDP GI E+R+L++ L
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  180  NDELDMTFIISSHILSELYLVATKFGIIENGKLIKEITKAEFEEESEDYIVLKTNNLAKA  239
             +  +MT +ISSH+LSE+  +AT +GII++G L+ + +  E+++ ++  I +KT+N+  A
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA  238

Query  240  SNILHDHLGY  249
             ++L+   GY
Sbjct  239  QKLLNTK-GY  247

417) TTHA1459 in NC_006461


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  159 bits (586),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 92/224 (42%), Positives = 158/224 (71%), Gaps = 6/224 (2%)

Query  3    VIQTHGLTKRYGRVVAVEDLNLSVREGEVYGLLGPNGSGKTTTILMLLGLTEPTSGEARV  62
            +I+T+ L+K Y ++  V D++L V +G VYG+LGPNG+GK+TT+ MLLGL+ PT G+  +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   LGFD-PMREPLKVKSRVGYLPDQVGFYGELSAWENLRYTTRLLGLPDKEAEARIEEVLKR  121
            LG +   ++ + +   +G L +  ++YG+L++ EN+    RLL+LP K+    ++E LK 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN----VNEALKI  119

Query  122  MGLWEVRDRKVAAFSRGMRQRLGLAEVLLKRPKVAILDEPTLGLDPEAAREFLDLIKGLK  181
            + L + +++KV+ +S GM+QRLG+A  ++K PK+ ILDEPT GLDP +  E+ +LIK+L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  182  AE-GITVLLSSHLLHQVQEVCDRVGLFHKGRLALEGTVAELAHR  224
               G+TVL+SSHLL +++++   +G+++ G L +++++ EL +R
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

418) TtJL18_0588 in NC_017587


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  159 bits (586),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 92/224 (42%), Positives = 158/224 (71%), Gaps = 6/224 (2%)

Query  3    VIQTHGLTKRYGRVVAVEDLNLSVREGEVYGLLGPNGSGKTTTILMLLGLTEPTSGEARV  62
            +I+T+ L+K Y ++  V D++L V +G VYG+LGPNG+GK+TT+ MLLGL+ PT G+  +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   LGFD-PMREPLKVKSRVGYLPDQVGFYGELSAWENLRYTTRLLGLPDKEAEARIEEVLKR  121
            LG +   ++ + +   +G L +  ++YG+L++ EN+    RLL+LP K+    ++E LK 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN----VNEALKI  119

Query  122  MGLWEVRDRKVAAFSRGMRQRLGLAEVLLKRPKVAILDEPTLGLDPEAAREFLDLIKGLK  181
            + L + +++KV+ +S GM+QRLG+A  ++K PK+ ILDEPT GLDP +  E+ +LIK+L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  182  AE-GITVLLSSHLLHQVQEVCDRVGLFHKGRLALEGTVAELAHR  224
               G+TVL+SSHLL +++++   +G+++ G L +++++ EL +R
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

419) Ththe16_1471 in NC_017272


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  159 bits (586),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 94/224 (42%), Positives = 159/224 (71%), Gaps = 6/224 (2%)

Query  3    VIQTHGLTKRYGRVVAVEDLNLSVQEGEVYGLLGPNGSGKTTTILMLLGLTEPTSGEARV  62
            +I+T+ L+K Y ++  V D++L V +G VYG+LGPNG+GK+TT+ MLLGL+ PT G+  +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   LGFD-PMREPLKVKSRVGYLPDQVGFYGELSAWENLRYTTRLLGLPDKEAEARIEEVLKR  121
            LG +   ++ + +   +G L +  ++YG+L++ EN+    RLL+LP K+    ++E LK 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN----VNEALKI  119

Query  122  MGLWEVKDRKVAAFSRGMRQRLGLAEVLLKRPKVAILDEPTLGLDPEAAREFLELIKGL-  180
            + L + K++KV+ +S GM+QRLG+A  ++K PK+ ILDEPT GLDP +  E+ ELIK+L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  181  KREGITVLLSSHLLHQVQEVCDRVGLFHKGRLALEGTVAELAHR  224
             + G+TVL+SSHLL +++++   +G+++ G L +++++ EL +R
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

420) NT01CX_1429 in NC_008593


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  159 bits (588),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 110/217 (51%), Positives = 167/217 (77%), Gaps = 5/217 (2%)

Query  3    EIILQTKRLCKTFKKQEAVKDVSISVQRNSIYGLLGPNGAGKSTLLKMIIGMLRPTSGEV  62
            E+I++T+RL K ++K   VKD+ + V + ++YG+LGPNGAGKST LKM++G+ +PT G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   LFDGHKWSRKD----LGSIGSLIESAPLYENLTARENLKVRTTVLGLPDSRIDEVLSIVE  118
             + G   + K+    L  IGSLIES++ Y +LT+ EN+ +   +L+LP   ++E L IV 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  119  LEDTGKKRAGQFSMGMKQRlgiaiallnnpnllilDEPTNGLDPFGIQELRELIRSFPSK  178
            LE+  +K+ +Q+S+GMKQRLGIA+A+++ P+LLILDEPTNGLDP GI+E+RELI+S+P K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  179  -GITVILSSHILSEVEQIADHIGIISGGVLGYEGELK  214
             G+TV++SSH+LSE++QIA  IGII+ G L +++ +K
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

421) Tbis_3430 in NC_014165


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  159 bits (587),  Expect = 9e-41, Method: Compositional matrix adjust.
 Identities = 86/211 (41%), Positives = 150/211 (72%), Gaps = 5/211 (2%)

Query  9    LHKHYGDFHALDGANLTVPEGSLYGLLGPNGAGKTTLMKIVAGLRRATSGRISLFGRPHD  68
            L K+Y  +  + + +L VP+G++YG+LGPNGAGK+T +K++ GL ++T G I+++G+  +
Sbjct  10   LSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELN  69

Query  69   RR----LLTRVGALLESPGLWPHLDGVTHLRIHARLRGVPQTRIDEVLGLVKLTEVRTRK  124
             +    +L  +G+L+ESP+   HL G+ ++ I  RL ++P+  ++E L +V+L + + +K
Sbjct  70   EKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKK  129

Query  125  VAKYSLGMRWRLGIAIALLGRPRLVVLDEPMNGLDPVGIRDMRATLRSLAEA-GTTVMVS  183
            V++YSLGM+ RLGIA+A++  P+L++LDEP NGLDP GI ++R  ++SL+E  G TV++S
Sbjct  130  VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLIS  189

Query  184  SHQLAEIAQICDHVGVLVAGRTAYEGALHGL  214
            SH L+EI QI   +G++  G   +++++  L
Sbjct  190  SHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

422) BMWSH_1723 in NC_017138


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  158 bits (584),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 155/224 (70%), Gaps = 6/224 (2%)

Query  3    NIILEVRSVSKKVRRGHLVKEVSFQISEGEICGLLGPNGAGKTTLIRLLTGLIKPTGGEV  62
            ++I+  + +SK   +   VK++ +++++G + G+LGPNGAGK+T +++L GL KPT G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   FINNKHIVS-QRKEALQSVGAIVESPIFFPYMTGKENLTNLARLHSFSTKQERQQRVKEV  121
             I  K++   +R   L+ +G+++ESP ++  +TG EN+T + RL  ++ K+     V+E 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-----VNEA  116

Query  122  LDIVGLTGRENDKVRTYSLGMKQRLGIAQALLGDPDLLILDEPANGLDPMGVRELRELLF  181
            L IV L  + N KV  YSLGMKQRLGIA A++  P LLILDEP+NGLDP G+ E+REL+ 
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  182  TLKRDYNKTILISSHLLDELQRVCDQIVVMREGELIWDGALDQL  225
            +L   Y  T+LISSHLL E++++   I ++ +GEL+ ++++ +L
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

423) srtF in NC_002737


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  158 bits (582),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 155/211 (74%), Gaps = 5/211 (2%)

Query  1    MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF  60
            +++ Q L K Y K   ++++++ +P+G VY+++GPNGAGKST +K+L GL   T G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  61   EGREWSRRD----LRKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVSESTILPLLNKVGLG  116
             G+E + ++    L+ IGS+IE P+ Y +L++ +NM ++  +L+++   +   L+ V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  117  NIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKSE-G  175
            N  ++ V Q+SLGMKQRLGIA+++++ PKLLILDEPTNGLDP GI+E+RE+I S+    G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  176  MTIMISSHILSEVEHLADFIGFIYEGKIILE  206
            MT++ISSH+LSE++++A  IG+I +G ++++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQ  214

424) srtF in NC_008023


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  158 bits (582),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 94/211 (45%), Positives = 155/211 (74%), Gaps = 5/211 (2%)

Query  20   MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF  79
            +++ Q L K Y K   ++++++ +P+G VY+++GPNGAGKST +K+L GL   T G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  80   EGREWSRRD----LRKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVSESAILPLLNKVGLG  135
             G+E + ++    L+ IGS+IE P+ Y +L++ +NM ++  +L+++   +   L+ V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  136  NIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKSE-G  194
            N  ++ V Q+SLGMKQRLGIA+++++ PKLLILDEPTNGLDP GI+E+RE+I S+    G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  195  MTIMISSHILSEVEHLADFIGFIYEGKIVLE  225
            MT++ISSH+LSE++++A  IG+I +G +V++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQ  214

425) srtF in NC_007297


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  158 bits (582),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 155/211 (74%), Gaps = 5/211 (2%)

Query  1    MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF  60
            +++ Q L K Y K   ++++++ +P+G VY+++GPNGAGKST +K+L GL   T G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  61   EGREWSRRD----LRKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVSESTILPLLNKVGLG  116
             G+E + ++    L+ IGS+IE P+ Y +L++ +NM ++  +L+++   +   L+ V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  117  NIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKSE-G  175
            N  ++ V Q+SLGMKQRLGIA+++++ PKLLILDEPTNGLDP GI+E+RE+I S+    G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  176  MTIMISSHILSEVEHLADFIGFIYEGKIILE  206
            MT++ISSH+LSE++++A  IG+I +G ++++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQ  214

426) srtF in NC_007296


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  158 bits (582),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 94/211 (45%), Positives = 155/211 (74%), Gaps = 5/211 (2%)

Query  20   MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF  79
            +++ Q L K Y K   ++++++ +P+G VY+++GPNGAGKST +K+L GL   T G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  80   EGREWSRRD----LRKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVSESAILPLLNKVGLG  135
             G+E + ++    L+ IGS+IE P+ Y +L++ +NM ++  +L+++   +   L+ V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  136  NIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKSE-G  194
            N  ++ V Q+SLGMKQRLGIA+++++ PKLLILDEPTNGLDP GI+E+RE+I S+    G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  195  MTIMISSHILSEVEHLADFIGFIYEGKIVLE  225
            MT++ISSH+LSE++++A  IG+I +G +V++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQ  214

427) srtF in NC_008021


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  158 bits (582),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 94/211 (45%), Positives = 155/211 (74%), Gaps = 5/211 (2%)

Query  20   MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF  79
            +++ Q L K Y K   ++++++ +P+G VY+++GPNGAGKST +K+L GL   T G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  80   EGREWSRRD----LRKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVSESAILPLLNKVGLG  135
             G+E + ++    L+ IGS+IE P+ Y +L++ +NM ++  +L+++   +   L+ V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  136  NIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKSE-G  194
            N  ++ V Q+SLGMKQRLGIA+++++ PKLLILDEPTNGLDP GI+E+RE+I S+    G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  195  MTIMISSHILSEVEHLADFIGFIYEGKIVLE  225
            MT++ISSH+LSE++++A  IG+I +G +V++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQ  214

428) srtF in NC_008022


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  158 bits (582),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 155/211 (74%), Gaps = 5/211 (2%)

Query  20   MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF  79
            +++ Q L K Y K   ++++++ +P+G VY+++GPNGAGKST +K+L GL   T G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  80   EGREWSRRD----LRKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVSESTILPLLNKVGLG  135
             G+E + ++    L+ IGS+IE P+ Y +L++ +NM ++  +L+++   +   L+ V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  136  DIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKSE-G  194
            +  ++ V Q+SLGMKQRLGIA+++++ PKLLILDEPTNGLDP GI+E+RE+I S+    G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  195  MTIMISSHILSEVEHLADFIGFIYEGKIVLE  225
            MT++ISSH+LSE++++A  IG+I +G +V++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQ  214

429) FP2_08430 in NC_021042


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  158 bits (583),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 121/298 (41%), Positives = 204/298 (69%), Gaps = 8/298 (2%)

Query  10   DLVIETKKLTKIYGEQTAVNSMNLHVKPGRIYGLLGRNGAGKTTIMKMILGLTPITSGEV  69
            +++I T++L+K Y     V+ ++L+V  G +YG+LG NGAGK+T +KM+LGL+  T G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  70   DVFGQNIKGHEK-RIYPRIGAIIETPGFYPNLTGTENLEIFAKLRGTPQPNAVKNALEVV  128
            +++G++++  ++  I   IG++IE+P++Y +LTG EN+ I  +L + P+ + V++AL +V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKIV  120

Query  129  GLPYKDKKLFSKYSLGMKQRLGIANAILHDPELLILDEPTNGLDPIGIAEVRNFIKNLSV  188
             L  + +K  S+YSLGMKQRLGIA AI+  P LLILDEPTNGLDP GI E+R++IK+L+ 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  189  ERGKTilisshilseisllADDIGIIDHGVLLEESSMDELEKKNRKYIQLQVSDIPKASL  248
              G T+LISSH+LSEI  +A  IGII+HG L+ + S+ EL+++ +  I ++  ++  A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA--  238

Query  249  ILERQFHVTDY-AVQDEHNLRLYD-TALDMAAINKALVVQDVAVISSQICNDTLEDYF  304
              ++ ++  +Y ++ ++  L + +    D+A IN  LV  ++ V+  +  + +LED F
Sbjct  239  --QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

430) CLL_A3442 in NC_010674


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  158 bits (582),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 127/287 (45%), Positives = 210/287 (74%), Gaps = 14/287 (4%)

Query  19   IKGINLSIKQGEIFGFLGPNGAGKTTTIRMLVGLIQPSNGEIRICGYDLN-KNKEKALKN  77
            +K+I+L + QG ++GFLGPNGAGK+TT++ML+GL +P++G+I I G +LN KN+   LK+
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  78   VGAVVENPELYKYLSGRENLMQIARIRsvskkeveelvklvglekRIDDKVSKYSLGMKQ  137
            +G+++E+P  Y  L+G EN+  + R+  ++KK+V+E +K+V LE++ + KVS+YSLGMKQ
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQ  139

Query  138  RLGLAVALMGNPKLLILDEPTNGLDPTGILEFRELIKKASKEKEISVFISSHILSEIQNL  197
            RLG+A+A+M  PKLLILDEPTNGLDP+GI E+RELIK  +    ++V+ISSH+LSEI+++
Sbjct  140  RLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQI  199

Query  198  CDKVAFINEGVI---QSIEKMDNKGIYTGKDDIILKTKHPVNAVLDIIKTLPYVIRSKIN  254
               +++IN+G +   +SI  ++N+    G+ +I +KTK+ V+A   +++T  Y+  S I+
Sbjct  200  ATSIGIINHGELVFQDSIKELHNR----GQSQIAIKTKNVVSAQ-KLLNTKGYM--SLIQ  252

Query  255  GD--EIVLLIEKDMTSKLIKKLVSENIEICEVYKNKQELEERYMELM  299
            ++   I  L + D+ +K+   LV  NI++  +  +K+ LE+ ++EL+
Sbjct  253  DGYLTIENLKDSDV-AKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

431) srtF in NC_020540


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 155/211 (74%), Gaps = 5/211 (2%)

Query  20   MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF  79
            +++ Q L K Y K   ++++++ +P+G VY+++GPNGAGKST +K+L GL   T G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  80   EGREWSRRD----LRKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVSESTILPLLNKVGLG  135
             G+E + ++    L+ IGS+IE P+ Y +L++ +NM ++  +L+++   +   L+ V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  136  NIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKSE-G  194
            N  ++ V Q+SLGMKQRLGIA+++++ PKLLILDEPTNGLDP GI+E+RE+I S+    G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  195  MTIMISSHILSEVEHLADFIGFIYEGKIILE  225
            MT++ISSH+LSE++++A  IG+I +G ++++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQ  214

432) srtF in NC_008024


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 155/211 (74%), Gaps = 5/211 (2%)

Query  20   MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF  79
            +++ Q L K Y K   ++++++ +P+G VY+++GPNGAGKST +K+L GL   T G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  80   EGREWSRRD----LRKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVSESTILPLLNKVGLG  135
             G+E + ++    L+ IGS+IE P+ Y +L++ +NM ++  +L+++   +   L+ V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  136  NIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKSE-G  194
            N  ++ V Q+SLGMKQRLGIA+++++ PKLLILDEPTNGLDP GI+E+RE+I S+    G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  195  MTIMISSHILSEVEHLADFIGFIYEGKIILE  225
            MT++ISSH+LSE++++A  IG+I +G ++++
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQ  214

433) CLJ_B2132 in NC_012658


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 102/234 (44%), Positives = 163/234 (70%), Gaps = 6/234 (2%)

Query  1    MNNIIEVKNLSKNIKGKTIIENMSFNIEKGDIYGFVGPNGAGKTTMIRLLTGLIKPTKGE  60
            M+ II  + LSK+ +    + ++ + + +G +YGF+GPNGAGK+T +++L GL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILINGIDVN-KDRKGALLNLGAIVECPIFFEYMTGREILKNLVRLHPNIPKEEREKRVDE  119
            I I G ++N K+R + L ++G+++E P ++  +TG E +  + RL  ++PK    K V+E
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPK----KNVNE  115

Query  120  VLTLVDLKHRENDKVSSYSLGMKQRLGIAQALLGKPEIIILDEPANGLDPIGIKDLRDII  179
             L +V L ++ N KVS YSLGMKQRLGIA A++  P ++ILDEP+NGLDP GI ++R++I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  180  LKLNRELKITFLVSSHLLDELQKFSNKIIIINHGRLKFKGSLEELLSMGDGNIE  233
              L     +T L+SSHLL E+++++  I IINHG L F++S+ EL + G+++I 
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA  229

434) nsuF in NC_015600


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  157 bits (579),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 103/224 (46%), Positives = 160/224 (72%), Gaps = 9/224 (4%)

Query  1    MEVII--QNLRKSYKDKEVLKDVSFKIEEGTICGLLGVNGAGKSTIMKILFGLERADSGE  58
            ME+II  Q L K Y+    +KD+ +++ +G++ G+LG NGAGKST +K+L+GL ++  G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  59   VIFNGKHKDIVEENRF----DIGALIESPAIYLNLSAFDNLKTRALLHDIPDERIYEVLQ  114
            + + GK  ++ E NR+    DIG+LIESP+ Y +L++++N+     L D+P   + E L+
Sbjct  61   INILGK--ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALK  118

Query  115  LVGLSDTGKKKAGHFSLGMKQRLGLGMAIITNPDLLILDEPTNGLDPDGIKELLNLIRDL  174
            +V L +  +KK +++SLGMKQRLG++MAI+  P LLILDEPTNGLDP GI E+ +LI+ L
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  175  -KKSGMTVLLSSHQLSEVSKIADQIVILNQGKIFYDDTNKNSND  217
              K GMTVL+SSH LSE+ +IA  I I+N+G + ++D+ K+ ++
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

435) OCC_10770 in NC_022084


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  157 bits (580),  Expect = 5e-40, Method: Compositional matrix adjust.
 Identities = 105/223 (48%), Positives = 157/223 (71%), Gaps = 6/223 (2%)

Query  3    VIETDKLTKIYGELVAVDHIDLKVREGRIYGFLGPNGAGKTTTISMLVGLVAPTSGKAFI  62
            +I T++L+K Y  +  V +IDL+V +G +YGFLGPNGAGK+TT+ ML+GL  PT G+  I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   KGIDVQE-NPIEVKRIIGYLPAENGLYPHMTALENLLFFAKFYKIPKNEAEKRANELLDL  121
             G +++E N I + + IG L    + Y H+T+LEN+ +  ++  +PK    K  NE L +
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK----KNVNEALKI  119

Query  122  VGLKEAKNKRVGEYSTGMKQRAALAQALINDPEILFLDEPTSGLDPRGAHEMRELIKEL-  180
            V L + KNK+V++YS GMKQR ++A A+++ P +L+LDEPT+GLDP G +E+RELIK L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  181  KKEGRTIFFSSHILPEVDELSDDIGIIVSGKLVAQGSKEELKQ  223
             K G T+++SSH+L+E+D+++  IGII  G LV Q+S  EL +
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

436) CA_C3026 in NC_003030


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  157 bits (579),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 95/218 (44%), Positives = 162/218 (75%), Gaps = 10/218 (4%)

Query  7    LVEDVHKVIRGREIIKGINFSIDEGEVLGFLGPNGSGKSTTLRMIVGLSKPSSGKIEICG  66
            L  + +K++R    +K+I++ + +G V GFLGPNG+GKSTTL+M++GL+KP+ G+I+I G
Sbjct  10   LSKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILG  65

Query  67   YSILHNY-VKAMESVGCIVEGPDLYEYMSGEDNLEMLAAMDK--NVTNEDIEYAVNLVNM  123
              + ++  +  +  +G ++E+P  Y  ++G   LE ++ M++  ++ + +++ A+++V +
Sbjct  66   KELNEKNRISILKDIGSLIESPSYYGHLTG---LENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  124  EKSIKDKISTYSLGMKQRMGIAQALMKRPKLLILDEPTNGLDPAGINDLRNLIQRLSKEE  183
            E+  + K+S YSLGMKQR+GIA A+MK PKLLILDEPTNGLDPAGI+++R+LI+ L+   
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  184  KISVLISSHLIAEIELICDKVSIIKDGEILKNASVAEL  221
             ++VLISSHL++EI+ I   ++II++GE++ + S+ EL
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

437) SMB_G3062 in NC_015687


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  157 bits (579),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 95/218 (44%), Positives = 162/218 (75%), Gaps = 10/218 (4%)

Query  7    LVEDVHKVIRGREIIKGINFSIDEGEVLGFLGPNGSGKSTTLRMIVGLSKPSSGKIEICG  66
            L  + +K++R    +K+I++ + +G V GFLGPNG+GKSTTL+M++GL+KP+ G+I+I G
Sbjct  10   LSKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILG  65

Query  67   YSILHNY-VKAMESVGCIVEGPDLYEYMSGEDNLEMLAAMDK--NVTNEDIEYAVNLVNM  123
              + ++  +  +  +G ++E+P  Y  ++G   LE ++ M++  ++ + +++ A+++V +
Sbjct  66   KELNEKNRISILKDIGSLIESPSYYGHLTG---LENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  124  EKSIKDKISTYSLGMKQRMGIAQALMKRPKLLILDEPTNGLDPAGINDLRNLIQRLSKEE  183
            E+  + K+S YSLGMKQR+GIA A+MK PKLLILDEPTNGLDPAGI+++R+LI+ L+   
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  184  KISVLISSHLIAEIELICDKVSIIKDGEILKNASVAEL  221
             ++VLISSHL++EI+ I   ++II++GE++ + S+ EL
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

438) CEA_G3032 in NC_017295


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  157 bits (579),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 95/218 (44%), Positives = 162/218 (75%), Gaps = 10/218 (4%)

Query  7    LVEDVHKVIRGREIIKGINFSIDEGEVLGFLGPNGSGKSTTLRMIVGLSKPSSGKIEICG  66
            L  + +K++R    +K+I++ + +G V GFLGPNG+GKSTTL+M++GL+KP+ G+I+I G
Sbjct  10   LSKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILG  65

Query  67   YSILHNY-VKAMESVGCIVEGPDLYEYMSGEDNLEMLAAMDK--NVTNEDIEYAVNLVNM  123
              + ++  +  +  +G ++E+P  Y  ++G   LE ++ M++  ++ + +++ A+++V +
Sbjct  66   KELNEKNRISILKDIGSLIESPSYYGHLTG---LENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  124  EKSIKDKISTYSLGMKQRMGIAQALMKRPKLLILDEPTNGLDPAGINDLRNLIQRLSKEE  183
            E+  + K+S YSLGMKQR+GIA A+MK PKLLILDEPTNGLDPAGI+++R+LI+ L+   
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  184  KISVLISSHLIAEIELICDKVSIIKDGEILKNASVAEL  221
             ++VLISSHL++EI+ I   ++II++GE++ + S+ EL
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

439) MC28_4987 in NC_018693


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 107/256 (42%), Positives = 181/256 (71%), Gaps = 10/256 (3%)

Query  1    MLLSLIKPTSGNIEIFGEDLFQNQK-DILRRIGSIVEVPGFYENLTAKENLLINAKIIGI  59
            MLL+L KPT GNI+I+G +L ++++  IL+ IGS++E P++Y +LT+ EN+ I  +++++
Sbjct  49   MLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL  108

Query  60   HKKNAIEEALEIVGLQHETKKLVGKYSLGMKQRLGIARALLHYPELLILDEPTNGLDPIG  119
             KKN ++EAL IV L+++ +K V++YSLGMKQRLGIA A++ +P LLILDEPTNGLDP G
Sbjct  109  PKKN-VNEALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAG  167

Query  120  IKEMRKLIKSLAQERNITILISSHILAEVEQLVDRMGIIHEGKLLEEVSLDTLRKSNRKY  179
            I E+R LIKSL++   +T+LISSH+L+E++Q+   +GII++G L+ + S+  L++  +  
Sbjct  168  IEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQ  227

Query  180  IEFQVNNDNRATMLLENHLQIFDY-EVHDEGNIRIYSHF--GQQGHINRTFVLNDVDVLK  236
            I ++ +N   A  LL+      +Y  + ++G + I  ++  ++ + IN  +V +++DV++
Sbjct  228  IAIKTKNVVSAQKLLNTK----GYMSLIQDGYLTI-ENLKDSDVAKINGMLVHSNIDVFR  282

Query  237  MAMSEDRLEDYFTNLV  252
            +      LED F +L+
Sbjct  283  IEEHKKSLEDIFLELL  298

440) CLJU_c00800 in NC_014328


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 198/298 (67%), Gaps = 8/298 (2%)

Query  3    DFVIETKQLTKIYGEQTAVSTVNLHVKKGQIYGLLGRNGAGKTTIMKMILGLTPITSGEV  62
            + +I T++L+K Y     V  ++L+V +G +YG+LG NGAGK+T +KM+LGL+  T G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   DVFGQNIKGREK-RIYPRIGAIIETPGFYPNLTGTENLEIFAKLRGTAAPNAVKNALEVV  121
            +++G++++ +++  I   IG++IE+P++Y +LTG EN+ I  +L + +  + V++AL +V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKIV  120

Query  122  GLPYKDKKLFGKYSLGMKQRLGIANAILHDPELLILDEPTNGLDPIGIAEVRDFIKNLSV  181
             L  + +K  ++YSLGMKQRLGIA AI+  P LLILDEPTNGLDP GI E+R++IK+L+ 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  182  ERGKTVlisshilseisllADDIGIIDHGALLEESSMEELKRKNGRYILLQVSDIPKASL  241
              G TVLISSH+LSEI  +A  IGII+HG L+ + S+ EL  +    I ++  ++  A  
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSA--  238

Query  242  ILERQFHLKDYS--VQDDHTLRLYATALDMGEINKALVMQNITVISSQLCNDTLEDYF  297
              ++ ++ K+Y   +QD+          D++ IN  LV  NI V+  +  + +LED F
Sbjct  239  --QKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

441) GYMC52_1613 in NC_014915


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 115/279 (42%), Positives = 187/279 (68%), Gaps = 4/279 (1%)

Query  22   IKGISFELHEGEVFGFLGPNGAGKTTTIRMLVGLIRPTSGTVAICGYDLH-RQFTDAIRQ  80
            +K+I + + +G V+GFLGPNGAGK+TT++ML+GL +PT G + I G +L+ ++    +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   IGCIVENPEMYPYLTGWENLEHFARMMPGISTDRIMEVAKLVDLEQRIHDRVGTYSLGMR  140
            IG ++E+P  Y  LTG EN+    R++ +++   + E  K+V LE++ + +V+ YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  141  QRLGIAQALLGKPKVLILDEPTNGLDPAGIREMRAFIRFLAETEGlsvlvsshllsEIQL  200
            QRLGIA A++  PK+LILDEPTNGLDPAGI E+R +I+ L+E  G++VL+SSHLLSEI+ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  201  MCDRVAIMAKGRLLAVDTVERLLNQ-QARVVWKAAPTDRARALLAAETEV-LRADEETIV  258
            +   ++I+  G L+  D++  L N+ Q+++  K+     A+ LL +   + L  D    +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  259  TPYEPSRLAAWNAKLVQAGVSVSEIEPRLPTLEDLFIEL  297
                 S +A  N+ LV++ + V  IE +  +LED+F+EL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

442) GYMC61_2485 in NC_013411


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 115/279 (42%), Positives = 187/279 (68%), Gaps = 4/279 (1%)

Query  22   IKGISFELHEGEVFGFLGPNGAGKTTTIRMLVGLIRPTSGTVAICGYDLH-RQFTDAIRQ  80
            +K+I + + +G V+GFLGPNGAGK+TT++ML+GL +PT G + I G +L+ ++    +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   IGCIVENPEMYPYLTGWENLEHFARMMPGISTDRIMEVAKLVDLEQRIHDRVGTYSLGMR  140
            IG ++E+P  Y  LTG EN+    R++ +++   + E  K+V LE++ + +V+ YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  141  QRLGIAQALLGKPKVLILDEPTNGLDPAGIREMRAFIRFLAETEGlsvlvsshllsEIQL  200
            QRLGIA A++  PK+LILDEPTNGLDPAGI E+R +I+ L+E  G++VL+SSHLLSEI+ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  201  MCDRVAIMAKGRLLAVDTVERLLNQ-QARVVWKAAPTDRARALLAAETEV-LRADEETIV  258
            +   ++I+  G L+  D++  L N+ Q+++  K+     A+ LL +   + L  D    +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  259  TPYEPSRLAAWNAKLVQAGVSVSEIEPRLPTLEDLFIEL  297
                 S +A  N+ LV++ + V  IE +  +LED+F+EL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

443) Clopa_0119 in NC_021182


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 92/226 (41%), Positives = 167/226 (74%), Gaps = 6/226 (2%)

Query  20   IKGISFSIKEGEIFGFLGPNGAGKTTTIKMLVGLISPNRGSIKVMGNNI-QTNKVEALKN  78
            +K+I + + +G ++GFLGPNGAGK+TT+KML+GL  P +G+I+++G+++ + N++  LK+
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   VGAVVETPELYTYLTGRQNLQQLARIQKSITEKDIENIVEIVGLKDRIDDKVKKYSLGMK  138
            +G+++E+P  Y  LTG +N+  + R+   +  K++++ + IV L ++ + KV +YSLGMK
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGLAEALIGKPKFIILDEPTNGLDPTGIIEFRNIIkkaaketktaVFISSHILSEIQK  198
            QRLG+A A++  PK++ILDEPTNGLDP+GI E+R++IK  +     +V+ISSH+LSEI++
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  LCDTVAFINNGEIQSIETINGNYNENTDNTDSNVTEKFEHVVISTK  244
            +  ++++IN+GE+     ++++ +E  +  +S+++ K  +VV + K
Sbjct  199  IATSIGIINHGEL----VFQDSIKELHNRGQSQIAIKTKNVVSAQK  240

444) nosF1 in NC_014974


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 91/224 (41%), Positives = 158/224 (71%), Gaps = 6/224 (2%)

Query  3    VIETHGLTKRYGRVVAVEDLNLEVQEGEVFGLLGPNGSGKTTTILMLLGLTEPTRGEARV  62
            +I T+ L+K Y ++  V D++L V +G V+G+LGPNG+GK+TT+ MLLGL+ PT+G+  +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   LGLD-PMREPLKVKSQVGYLPDQVGFYGELTAWENLRYTTRLLGLPEAEARARIEEVLKR  121
            LG +   ++ + +  ++G L +  ++YG+LT+ EN+    RLL+LP    +  ++E LK 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP----KKNVNEALKI  119

Query  122  MGLWEVRDRRVSAFSRGMRQRLGLAEVLLKRPKVAILDEPTLGLDPEAAREFLELIKGLK  181
            + L + ++++VS +S GM+QRLG+A  ++K PK+ ILDEPT GLDP +  E+ ELIK+L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  182  AE-GITILLSSHLLHQVQEVCDRVGLFHKGHLALLGTVEELAQR  224
               G+T+L+SSHLL +++++   +G+++ G+L + +++ EL +R
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

445) bcrA in NC_009328


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  156 bits (577),  Expect = 8e-40, Method: Compositional matrix adjust.
 Identities = 114/279 (41%), Positives = 187/279 (68%), Gaps = 4/279 (1%)

Query  22   IKGISFELREGEVFGFLGPNGAGKTTTIRMLVGLIRPTSGTVAICGYDLHHRFTEAI-RH  80
            +K+I + + +G V+GFLGPNGAGK+TT++ML+GL +PT G + I G +L+++   +I ++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   IGCIVENPEMYPYLTGWENLEHFARMMPEVGEERIMEVTKLVGLEQRIHDRVSTYSLGMR  140
            IG ++E+P  Y  LTG EN+    R++ ++    + E  K+V LE++ + +VS YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  141  QRLGIAQALLGKPKVLILDEPTNGLDPAGIREMRAFIRFLAETEGlsvlvsshllsEIQL  200
            QRLGIA A++  PK+LILDEPTNGLDPAGI E+R +I+ L+E  G++VL+SSHLLSEI+ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  201  MCDRVAIMAKGRLLAVDTVERLL-KEQARVVWKADPVDKARALLAEETEV-LRANEEIIV  258
            +   ++I+  G L+  D++  L  + Q+++  K+  V  A+ LL     + L  +  + +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  259  TPYEPAKLAAWNTKLIRAGVAVAQIEPRLPTLEDLFIEL  297
                 + +A  N  L+++ + V +IE +  +LED+F+EL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

446) GYMC10_5326 in NC_013406


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 113/281 (41%), Positives = 181/281 (65%), Gaps = 8/281 (2%)

Query  22   VDDVTFDIAPGQIFGFLGPNGAGKTTTIRMMVGLMSITQGDITIGGYSIR-KNYEQAAAQ  80
            V D+ + ++ G ++GFLGPNGAGK+TT++M++GL   TQG+I I G  +  KN      +
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   IGAIVENPEMYKFLSGYNNLKHFARMMQGITKERIDEVVELVGLGNRIHEKVQTYSLGMR  140
            IG+++E+P  Y  L+G +N+    R+++ + K  ++E + +V L N+ + KV  YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  141  QRLGVAQALLHRPKLLILDEPTNGLDPQGIRELRDYLRRLTQEEGTTVFVSSHLLSEMEL  200
            QRLG+A A++  PKLLILDEPTNGLDP GI E+R+ ++ L +  G TV++SSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  201  MCDTVGIIRHGKLV---DIRQLRTDGGERMFEETAFTVSdadaaaallqdyqataREHRV  257
            +  ++GII HG LV    I++L+  G  ++   T   VS         ++Y +  ++  +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVS--AQKLLNTKGYMSLIQDGYL  256

Query  258  LVRGDRDM-IADINAALVEAGIRVYAIQPVTRSLEDQFLEM  297
             +   +D  +A IN+ LV++ I V+ I+   +SLED FLE+
Sbjct  257  TIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

447) SSUJS14_0622 in NC_017618


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  155 bits (572),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 103/224 (46%), Positives = 159/224 (71%), Gaps = 9/224 (4%)

Query  1    MEVII--QNLRKSYKDKEVLKDVSFKIEEGTICGLLGVNGAGKSTIMKILFGLERADSGE  58
            ME+II  Q L K Y+    +KD+ +++ +G++ G+LG NGAGKST +K+L+GL ++  G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  59   VIFNGKHKDIVEENRF----DIGALIESPAIYLNLSAFDNLKTRALLHDIPDERIYEVLQ  114
            + + GK  ++ E NR+    DIG+LIESP+ Y +L++++N+     L D+P   + E L+
Sbjct  61   INILGK--ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALK  118

Query  115  LVGLSDTGKKKAGHFSLGMKQRLGLGMAIITNPDLLILDEPTNGLDPDGIKELLNLIRDL  174
            +V L +  +KK +++SLGMKQRLG++MAI+  P LLILDEPTNGLDP GI E+ +LI+ L
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  175  -KKSGMTVLLSSHQLSEVSKIADQIVILNQGKIFYDDINKNSND  217
              K GMTVL+SSH LSE+ +IA  I I+N+G + ++D  K+ ++
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

448) NJAUSS_0609 in NC_020526


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  155 bits (573),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 103/224 (46%), Positives = 159/224 (71%), Gaps = 9/224 (4%)

Query  6    MEVII--QNLRKSYKDKEVLKDVSFKIEEGTICGLLGVNGAGKSTIMKILFGLERADSGE  63
            ME+II  Q L K Y+    +KD+ +++ +G++ G+LG NGAGKST +K+L+GL ++  G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  64   VIFNGKHKDIVEENRF----DIGALIESPAIYLNLSAFDNLKTRALLHDIPDERIYEVLQ  119
            + + GK  ++ E NR+    DIG+LIESP+ Y +L++++N+     L D+P   + E L+
Sbjct  61   INILGK--ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALK  118

Query  120  LVGLSDTGKKKAGHFSLGMKQRLGLGMAIITNPDLLILDEPTNGLDPDGIKELLNLIRDL  179
            +V L +  +KK +++SLGMKQRLG++MAI+  P LLILDEPTNGLDP GI E+ +LI+ L
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  180  -KKSGMTVLLSSHQLSEVSKIADQIVILNQGKIFYDDINKNSND  222
              K GMTVL+SSH LSE+ +IA  I I+N+G + ++D  K+ ++
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

449) M493_08470 in NC_022080


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  155 bits (573),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 113/279 (41%), Positives = 185/279 (67%), Gaps = 4/279 (1%)

Query  22   IKGISFELQEGEVFGFLGPNGAGKTTTIRMLVGLIRPTSGTVAICGYDLH-RQFTEAIRH  80
            +K+I + + +G V+GFLGPNGAGK+TT++ML+GL +PT G + I G +L+ ++    +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   IGCIVENPEMYPYLTGWENLEHFARMMPGVGAERIAEVAKLVGLEQRIHDRVSTYSLGMR  140
            IG ++E+P  Y  LTG EN+    R++ ++    + E  K+V LE++ + +VS YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  141  QRLGIAQALLGKPKVLILDEPTNGLDPAGIREMRAFIRFLAETEGlsvlvsshllsEIQL  200
            QRLGIA A++  PK+LILDEPTNGLDPAGI E+R +I+ L+E  G++VL+SSHLLSEI+ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  201  MCDRVAIMAKGRLLAVDTVERLL-KEQARVVWKAAPIERARALLTEETDV-LRADEETVV  258
            +   ++I+  G L+  D++  L  + Q+++  K+  +  A+ LL     + L  D    +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  259  TPYEPAKLAAWNAKLVQAGVAVAEIDPRLPTLEDLFIEL  297
                 + +A  N+ LV++ + V  I+ +  +LED+F+EL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

450) Theos_1664 in NC_019386


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  155 bits (572),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 92/225 (41%), Positives = 157/225 (70%), Gaps = 6/225 (2%)

Query  1    MVVQTRGLSKRYGRVVAVEDLNLEVAEGEVFGLLGPNGSGKTTTILMLLGLTEPTSGEAR  60
            M+++T+ LSK Y ++  V D++L V++G V+G+LGPNG+GK+TT+ MLLGL+ PT G+  
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   VLGHD-PVREPLKVKAKVGYLPDQVGFYGELTAWENLRYTTRLLGLSDGEARARIEEVLK  119
            +LG +   ++ + +   +G L +  ++YG+LT+ EN+    RLL+L    ++  ++E LK
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL----PKKNVNEALK  118

Query  120  RMGLWEVRDRRVSAFSRGMRQRLGLAEVLLKRPKVAILDEPTLGLDPEAAREFLELIKGL  179
             + L + ++++VS +S GM+QRLG+A  ++K PK+ ILDEPT GLDP +  E+ ELIK+L
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  180  KGE-GITVLLSSHLLHQVQEICDRVGLFHKGRLALVGRVEELAQK  223
                G+TVL+SSHLL ++++I   +G+++ G L + + + EL ++
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

451) CBF_1978 in NC_017297


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  154 bits (567),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 104/247 (43%), Positives = 170/247 (69%), Gaps = 12/247 (4%)

Query  1    MNNIIEVKNLSKNIKGKTIIENMSFNIEKGDIYGFVGPNGAGKTTMIRLLTGLIKPTKGE  60
            M+ II  + LSK+ +    + ++ + + +G +YGF+GPNGAGK+T +++L GL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILIKGVDVN-KDRKRALLNLGAIVECPIFFEYMTGREILKNLVRLHPNIPKEEREKRVDE  119
            I I G ++N K+R   L ++G+++E P ++  +TG E +  + RL  ++PK    K V+E
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPK----KNVNE  115

Query  120  VLNLVDLKYREKDRVSTYSLGMKQRLGIAQALLGKPEIIILDEPANGLDPIGIKDLRDII  179
             L++V L  + + +VS YSLGMKQRLGIA A++  P ++ILDEP+NGLDP GI ++R++I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  180  LKLNRELKITFLVSSHLLDELKKFSSRIIIINNGQLKFKGSLEELLSMGDGNIEEVFLQV  239
              L     +T L+SSHLL E+ ++++ I IIN+G+L F++S+ EL + G+++I       
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA------  229

Query  240  LKTKEVV  246
            +KTK+VV
Sbjct  230  IKTKNVV  236

452) CLI_1994 in NC_009699


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  154 bits (567),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 104/247 (43%), Positives = 170/247 (69%), Gaps = 12/247 (4%)

Query  1    MNNIIEVKNLSKNIKGKTIIENMSFNIEKGDIYGFVGPNGAGKTTMIRLLTGLIKPTKGE  60
            M+ II  + LSK+ +    + ++ + + +G +YGF+GPNGAGK+T +++L GL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILIKGVDVN-KDRKRALLNLGAIVECPIFFEYMTGREILKNLVRLHPNIPKEEREKRVDE  119
            I I G ++N K+R   L ++G+++E P ++  +TG E +  + RL  ++PK    K V+E
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPK----KNVNE  115

Query  120  VLNLVDLKYREKDRVSTYSLGMKQRLGIAQALLGKPEIIILDEPANGLDPIGIKDLRDII  179
             L++V L  + + +VS YSLGMKQRLGIA A++  P ++ILDEP+NGLDP GI ++R++I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  180  LKLNRELKITFLVSSHLLDELKKFSSRIIIINNGQLKFKGSLEELLSMGDGNIEEVFLQV  239
              L     +T L+SSHLL E+ ++++ I IIN+G+L F++S+ EL + G+++I       
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA------  229

Query  240  LKTKEVV  246
            +KTK+VV
Sbjct  230  IKTKNVV  236

453) H04402_01948 in NC_017299


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 100/234 (43%), Positives = 164/234 (71%), Gaps = 6/234 (2%)

Query  1    MNNIIEVKNLSKNIKGKTIIENMNFNIEKGDIYGFVGPNGAGKTTMIRLLTGLIKPTKGE  60
            M+ II  + LSK+ +    + ++++ + +G +YGF+GPNGAGK+T +++L GL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILIKGVDVN-KDRKRALLNLGAIVECPIFFEYMTGREILKNLVRLHPNIPKEEREKRVDE  119
            I I G ++N K+R   L ++G+++E P ++  +TG E +  + RL  ++PK    K V+E
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPK----KNVNE  115

Query  120  VLNLVDLKYREKDKVSTYSLGMKQRLGIAQALLGKPEIIILDEPANGLDPIGIKDLRDII  179
             L++V L  + + KVS YSLGMKQRLGIA A++  P ++ILDEP+NGLDP GI ++R++I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  180  LKLNRKLKITFLVSSHLLDELKKFSSRIIIINNGQLKFKGSLEKLLSMGDGNIE  233
              L  K  +T L+SSHLL E+ ++++ I IIN+G+L F++S+  L + G+++I 
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA  229

454) GC56T3_1867 in NC_014206


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 115/279 (42%), Positives = 186/279 (67%), Gaps = 4/279 (1%)

Query  22   IKGISFELHEGEVFGFLGPNGAGKTTTIRMLVGLIRPTSGTVAICGYDLH-RQFTDAIRQ  80
            +K+I + + +G V+GFLGPNGAGK+TT++ML+GL +PT G + I G +L+ ++    +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   IGCIVENPEMYPYLTGWENLEHFARMMPGIGADRIMEVAKLVGLEERIHDRVGTYSLGMR  140
            IG ++E+P  Y  LTG EN+    R++ ++    + E  K+V LE++ + +V+ YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  141  QRLGIAQALLGKPKVLILDEPTNGLDPAGIREMRAFIRFLAETEGlsvlvsshllsEIQL  200
            QRLGIA A++  PK+LILDEPTNGLDPAGI E+R +I+ L+E  G++VL+SSHLLSEI+ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  201  MCDRVAIMAKGRLLAVDTVERLLNQ-QARVVWKAAPTDRARALLAAETEV-LRADEETIV  258
            +   ++I+  G L+  D++  L N+ Q+++  K+     A+ LL +   + L  D    +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  259  TPYEPSRLAAWNAKLVQAGVSVSEIEPRLPTLEDLFIEL  297
                 S +A  N+ LV++ + V  IE +  +LED+F+EL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

455) GK1643 in NC_006510


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  154 bits (569),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 115/279 (42%), Positives = 186/279 (67%), Gaps = 4/279 (1%)

Query  22   IKGISFELHEGEVFGFLGPNGAGKTTTIRMLVGLIRPTSGTVAICGYDLH-RQFTDAIRQ  80
            +K+I + + +G V+GFLGPNGAGK+TT++ML+GL +PT G + I G +L+ ++    +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   IGCIVENPEMYPYLTGWENLEHFARMMPGIGADRIMEVAKLVGLEQRIHDRVGTYSLGMR  140
            IG ++E+P  Y  LTG EN+    R++ ++    + E  K+V LE++ + +V+ YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  141  QRLGIAQALLGKPKVLILDEPTNGLDPAGIREMRAFIRFLAETEGlsvlvsshllsEIQL  200
            QRLGIA A++  PK+LILDEPTNGLDPAGI E+R +I+ L+E  G++VL+SSHLLSEI+ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  201  MCDRVAIMAKGRLLAVDTVERLLNQ-QARVVWKAAPTDRARALLAAETEV-LRADEETIV  258
            +   ++I+  G L+  D++  L N+ Q+++  K+     A+ LL +   + L  D    +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  259  TPYEPSRLAAWNAKLVQAGVSVSEIEPRLPTLEDLFIEL  297
                 S +A  N+ LV++ + V  IE +  +LED+F+EL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

456) GTCCBUS3UF5_19030 in NC_016593


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  154 bits (569),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 115/279 (42%), Positives = 186/279 (67%), Gaps = 4/279 (1%)

Query  22   IKGISFELHEGEVFGFLGPNGAGKTTTIRMLVGLIRPTSGTVAICGYDLH-RQFTDAIRQ  80
            +K+I + + +G V+GFLGPNGAGK+TT++ML+GL +PT G + I G +L+ ++    +++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  81   IGCIVENPEMYPYLTGWENLEHFARMMPGIGADRIMEVAKLVGLEQRIHDRVGTYSLGMR  140
            IG ++E+P  Y  LTG EN+    R++ ++    + E  K+V LE++ + +V+ YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  141  QRLGIAQALLGKPKVLILDEPTNGLDPAGIREMRAFIRFLAETEGlsvlvsshllsEIQL  200
            QRLGIA A++  PK+LILDEPTNGLDPAGI E+R +I+ L+E  G++VL+SSHLLSEI+ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  201  MCDRVAIMAKGRLLAVDTVERLLNQ-QARVVWKAAPTDRARALLAAETEV-LRADEETIV  258
            +   ++I+  G L+  D++  L N+ Q+++  K+     A+ LL +   + L  D    +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  259  TPYEPSRLAAWNAKLVQAGVSVSEIEPRLPTLEDLFIEL  297
                 S +A  N+ LV++ + V  IE +  +LED+F+EL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

457) TCCBUS3UF1_16750 in NC_017278


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  153 bits (564),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 91/224 (41%), Positives = 155/224 (70%), Gaps = 6/224 (2%)

Query  3    VIQTQGLTKRYGRVVAVEDLNLSVEEGEVFGLLGPNGSGKTTTILMLLGLTEPTAGEARV  62
            +I+TQ L+K Y ++  V D++L V +G V+G+LGPNG+GK+TT+ MLLGL+ PT G+  +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   LGLD-PMRQPLEVKARVGYLPDQVGFYGELTAWENLRYTTRLLGLPEAEARARIQEVLER  121
            LG +   ++ + +   +G L +  ++YG+LT+ EN+    RLL+LP    +  ++E L  
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP----KKNVNEALKI  119

Query  122  MGLWEVRERRVAAFSRGMRQRLGLAEVLLKRPKVAILDEPTLGLDPEAAREFLELIKGLK  181
            + L + ++++V+ +S GM+QRLG+A  ++K PK+ ILDEPT GLDP +  E+ ELIK+L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  182  AE-GITILLSSHLLHQVQEICDRVGLFHKGRLALLGTVEELSQR  224
               G+T+L+SSHLL ++++I   +G+++ G L + +++ EL +R
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

458) LGAS_1495 in NC_008530


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  153 bits (564),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 92/216 (43%), Positives = 160/216 (75%), Gaps = 5/216 (2%)

Query  1    MTDILTTKELGKNFKNKHVLSQINIHVPEGKIYCIMGPNGAGKSTLLKMISGIEKPTEGD  60
            M  I+ T+ L+K++++   + +I+++VP+G +Y ++GPNGAGKST LKM+ G+ KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   INFKGENWKRED----LKTIGSLIEEPGLFDNLTVEDNIKLKLKLHHVENKDQEQILNTL  116
            IN+ G + +  +    LK IGSLIE P+ +++LT  +N+ +  +L ++ +K+ ++ L+ +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  117  GFGDHNQEKVKGFSTGMRQRLGIALAFMGNPDLVVLDEPTNGLDTFGIHELRELLM-LEK  175
             + ++++ KV  +S GM+QRLGIA+A+M  P L++LDEPTNGLD  GI+E+REL+  L  
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  176  KQGKTIIIASHMLSEIQKVADRIAILGNGELLLEED  211
            K G T++I+SH+LSEI+++A  I+I+ +GEL++++ 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDS  216

459) Calow_2077 in NC_014657


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  153 bits (564),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 101/241 (42%), Positives = 171/241 (71%), Gaps = 16/241 (6%)

Query  20   IKGISFDIEEGRIVGFVGPNGAGKTTTIKMITGLIKPDSGQIKIFGYDIVH-EREMALKF  78
            +K+I + + +G + GF+GPNGAGK+TT+KM+ GL KP  G+I+I+G ++ + +R   LK 
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGCIIENPELYEYLTGFENLAQLARISNIPRSKIIEAAKLVGIDYALKEKAKKYSLGMKQ  138
            IG +IE+P  Y  LTG+EN++ + R+ ++P+ ++ EA K+V ++   + K  +YSLGMKQ
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQ  139

Query  139  RLALAMAILADPKLLILDEPTNGLDPSGIIELRNLLKNLANDKKVTIFISSHNLFEIQEI  198
            RL++AMAI+  PKLLILDEPTNGLDP+GI E+R+L+K+L++   +T++ISSH L EI++I
Sbjct  140  RLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQI  199

Query  199  CDKVVFIKEGKIEMIENIDSSFIENVKFVLVLNEDRNTNDVVAKATEVISCFEGAKILEV  258
               + +I++G  E++      F +++K +    ++R  +++  K+ +V+S   + K+L+ 
Sbjct  200  ATSIGIINHG--ELV------FQDSIKEL----HNRGQSQIAIKTKNVVS---AQKLLNT  244

Query  259  K  259
            K
Sbjct  245  K  245

460) Awo_c34050 in NC_016894


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  152 bits (561),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 104/214 (49%), Positives = 162/214 (76%), Gaps = 5/214 (2%)

Query  10   ILKTNHVSKKFKQTDAIKDLSMSVRKNSVYGLLGPNGAGKSTFLKMVTGIIRPTSGEIIF  69
            I++T+++SK +++   +KD+ + V + +VYG+LGPNGAGKST LKM+ G+ +PT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  70   NNHPWTRKD----LLNIGSLIESPPLYENLTAFENLKVRALLLGISTDRCHQVLQQMDLM  125
                   K+    L +IGSLIESP+ Y +LT++EN+ +   LL+++    ++ L+ + L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  126  ATNNKKVANFSLGMKQRLGIalallnnpqllvlDEPTNGLDPFGIEELRVMIKNFAAS-G  184
              +NKKV+++SLGMKQRLGIA+A+++ P+LL+LDEPTNGLDP GIEE+R +IK+++   G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  185  IAVIISSHILSEIQQVADDIGIIYNGSLLYQDKI  218
            ++V+ISSH+LSEI+Q+A  IGII +G L++QD I
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

461) srtF in NC_017576


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  152 bits (560),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 98/214 (46%), Positives = 150/214 (71%), Gaps = 3/214 (1%)

Query  1    MRVKVTNLQKSYKDRDILKDISFTIKSGTICGLLGVNGAGKSTIMKILFGLEKPSSGNIL  60
            M ++   L K Y+    +KDI + +  G++ G+LG NGAGKST +K+L+GL KP+ GNI 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDEKTPQEIKKSD--EKLGALIESPAIYMNLSAFENLKTRALLYDIPDSKIKETLALIGL  118
            +  K  +E ++      +G+LIESP+ Y +L+++EN+     L D+P  +++E+L ++ L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADTGRKKAGKFSLGMKQRLGIGMAIITNPEFLILDEPTNGLDPDGIQELLELITSL-KRQ  177
             +   KK +++SLGMKQRLGI+MAI+  P +LILDEPTNGLDP GI+E+ ELI SL  + 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  178  GMTILISSHQLHEISQVADDIMILHNGEIRYNQP  211
            GMT+LISSH L EI Q+A  I I+++GE+ ++++
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDS  216

462) nisF in NC_015215


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  152 bits (560),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 98/214 (46%), Positives = 150/214 (71%), Gaps = 3/214 (1%)

Query  1    MRVKVTNLQKSYKDRDILKDISFTIKSGTICGLLGVNGAGKSTIMKILFGLEKPSSGNIL  60
            M ++   L K Y+    +KDI + +  G++ G+LG NGAGKST +K+L+GL KP+ GNI 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDEKTPQEIKKSD--EKLGALIESPAIYMNLSAFENLKTRALLYDIPDSKIKETLALIGL  118
            +  K  +E ++      +G+LIESP+ Y +L+++EN+     L D+P  +++E+L ++ L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADTGRKKAGKFSLGMKQRLGIGMAIITNPEFLILDEPTNGLDPDGIQELLELITSL-KRQ  177
             +   KK +++SLGMKQRLGI+MAI+  P +LILDEPTNGLDP GI+E+ ELI SL  + 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  178  GMTILISSHQLHEISQVADDIMILHNGEIRYNQP  211
            GMT+LISSH L EI Q+A  I I+++GE+ ++++
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDS  216

463) GALLO_1107 in NC_013798


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  152 bits (560),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 98/214 (46%), Positives = 150/214 (71%), Gaps = 3/214 (1%)

Query  1    MRVKVTNLQKSYKDRDILKDISFTIKSGTICGLLGVNGAGKSTIMKILFGLEKPSSGNIL  60
            M ++   L K Y+    +KDI + +  G++ G+LG NGAGKST +K+L+GL KP+ GNI 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDEKTPQEIKKSD--EKLGALIESPAIYMNLSAFENLKTRALLYDIPDSKIKETLALIGL  118
            +  K  +E ++      +G+LIESP+ Y +L+++EN+     L D+P  +++E+L ++ L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  119  ADTGRKKAGKFSLGMKQRLGIGMAIITNPEFLILDEPTNGLDPDGIQELLELITSL-KRQ  177
             +   KK +++SLGMKQRLGI+MAI+  P +LILDEPTNGLDP GI+E+ ELI SL  + 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  178  GMTILISSHQLHEISQVADDIMILHNGEIRYNQP  211
            GMT+LISSH L EI Q+A  I I+++GE+ ++++
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDS  216

464) CLD_2696 in NC_010516


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  152 bits (560),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 98/234 (42%), Positives = 163/234 (70%), Gaps = 6/234 (2%)

Query  1    MNNIIEVKNLSKNIKGKTIIENMNFNIEKGDIYGFVGPNGAGKTTMIRLLTGLIKPTKGE  60
            M+ II  + LSK+ +    + ++++ + +G +YGF+GPNGAGK+T +++L GL KPT+G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   ILIKGVDVN-KDRKRALLNLGAIVECPIFFEYMTGREILKNLVRLHPNIPKEEREKRVDE  119
            I I G ++N K+R   L ++G+++E P ++  +TG E +  + RL  ++PK    K V+E
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPK----KNVNE  115

Query  120  VLNLVDLKYREKDKVSTYSLGMKQRLGIAQGLLGKPEIIILDEPANGLDPIGIKDLRDII  179
             L++V L  + + KVS YSLGMKQRLGIA +++  P ++ILDEP+NGLDP GI ++R++I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  180  LKLNRELKITFLVSSHLLDELKKFSSRIIIINNGQLKFKGSLEKLLSMGDGNIE  233
              L     +T L+SSHLL E+ ++++ I IIN+G+L F++S+  L + G+++I 
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA  229

465) Athe_2348 in NC_012034


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  152 bits (561),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/231 (43%), Positives = 162/231 (71%), Gaps = 13/231 (5%)

Query  20   IKGISFDIEEGRIVGFVGPNGAGKTTTIKMITGLIKPDSGQVKIFGYDIVH-EREMALKF  78
            +K+I + + +G + GF+GPNGAGK+TT+KM+ GL KP  G+++I+G ++ + +R   LK 
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   IGSIIENPELYEYLTGYENLAQLTRISNIPKSKIIEVAKLVGIDYALKEKTKKYSLGMKQ  138
            IGS+IE+P  Y  LTG EN++ + R+ ++PK ++ E  K+V ++   + K  +YSLGMKQ
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQ  139

Query  139  RLALAMAILTDPKLLVLDEPTNGLDPSGIIELRSLLKSLANDKKVTIFISSHNLFEIQEI  198
            RL++AMAI+  PKLL+LDEPTNGLDP+GI E+R L+KSL++   +T++ISSH L EI++I
Sbjct  140  RLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQI  199

Query  199  CDKVVFIKEGKIETIENIDRSFIENVKFVLVLNEDRNTNDVVVKTTEVISC  249
               + +I++G +         F +++K +    ++R  +++ +KT +V+S 
Sbjct  200  ATSIGIINHGEL--------VFQDSIKEL----HNRGQSQIAIKTKNVVSA  238

466) CLH_1613 in NC_010723


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 119/286 (42%), Positives = 197/286 (69%), Gaps = 12/286 (4%)

Query  20   VEDISFTVNKGEIFGFLGPNGAGKTTTIKMITGLYSISKGEIYIDGKNVK-KQFEKALKG  78
            V DI + V +G ++GFLGPNGAGK+TT+KM+ GL   ++G+I I GK+++ K+    LK+
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  79   VGGIIENPEMYGYLSGKDNLKIYARMHGGITKHRIDEVVNLVKLGNRINDKVSKYSLGMR  138
            +G++IE+P  YG L+G +N+ I  R+ + + K  ++E +++V+L N+ N KVS+YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  139  QRLGVAQALLHRPKLLILDEPTNGLDPMGIKELRETLRELCDKEGLSVMVSSHLLSEMEL  198
            QRLG+A A++  PKLLILDEPTNGLDP GI E+RE ++ L +K G++V++SSHLLSE++ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  199  MCDRFGiidsgkiidiktiddikNNESLNIKTYLLEVNDKKKTIRIINSR-YPNVVLNED  257
            +   +GII+ G ++   +I ++ N    +I    +  ++   + +++N++ Y +++    
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIA---IKTKNVVSAQKLLNTKGYMSLI----  251

Query  258  KEG-IKISCEKD-ELAKINKELVINDISVFGTRVITKTLEDEFMEV  301
            ++G + I   KD ++AKIN  LV ++I VF      K+LED F+E+
Sbjct  252  QDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

467) HPL003_22925 in NC_016641


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  152 bits (560),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 174/255 (69%), Gaps = 5/255 (1%)

Query  43   ETVLSVQHVKKRIGRKMIIHDVTFDVRAGEIFGFLGPNGAGKTTTIRMLVDLIKPTEGTI  102
            E ++  Q++ K   +   + D+ + V  G ++GFLGPNGAGK+TT++ML++L KPT+G I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  103  TVCGHNVN-RDPEQALRHIGSIVENPEVYSYLTGWENLEHFARMQPGVDEQrirevvelv  161
             + G ++N ++    L++IGS++E+P  Y+ LTG EN+    R+  ++  + + E + +V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIV  120

Query  162  rldrriHDKVSTYSLGMRQRLGIAQALLGRPKLLILDEPTNGLDPKGIKEMRAFIRLLAA  221
            RL+ + + KVS YSLGM+QRLGIA A++  PKLLILDEPTNGLDP GI E+R +I+ L+ 
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  222  E-GMAVFVSSHLLSEIQLLCDRVAIISRGRVLAVGGVRELVE-THSHMAVWQLEPHDQGL  279
              GM+V++SSHLLSEI+ +   ++II++G ++  ++++EL +  +S++A+        + 
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT-KNVVSAQ  239

Query  280  ALLEDSPYVQIITNA  294
             LL+   Y+ +I ++
Sbjct  240  KLLNTKGYMSLIQDG  254

468) Shel_03750 in NC_013165


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  151 bits (556),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 103/219 (48%), Positives = 157/219 (72%), Gaps = 9/219 (4%)

Query  5    ILETRGLVKRFGRGSREQTAVDGVSLHVEEGKVYGLLGPNGAGKSTTLKMITGMLRPSEG  64
            I+ T+ L K + +  R    V ++ L+V +G VYG+LGPNGAGKSTTLKM+ G+ +P++G
Sbjct  4    IIRTQRLSKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQG  59

Query  65   QILF---EQRPWQRNDLYR-IGSLVEQPPLYPNLTARENMRVRTTMLGLPDERIDEVLST  120
            +I +   E    +R  + + IGSL+E P+ Y +LT+ ENM +   +L+LP   ++E L  
Sbjct  60   NINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKI  119

Query  121  VGLADTGTKRADRFSMGMKQRLGIALALLTQPKLLILDEPTNGLDPigieelriiireFP  180
            V L +   K+  ++S+GMKQRLGIA+A++  PKLLILDEPTNGLDP GIEE+R +I+ +P
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  181  -KHGITVLLSSHILNEVQQTADSVGIIVNGRLAYEGALQ  218
             K G+TVL+SSH+L+E++Q A S+GII +G L ++++++
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIK  218

469) CLH_3221 in NC_010723


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  151 bits (557),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 124/285 (44%), Positives = 204/285 (72%), Gaps = 10/285 (3%)

Query  19   IKGINLSIKQGEIFGFLGPNGAGKTTTIRMLVGLIKPTNGEIRICGYDLN-KNKEKALKN  77
            +K+I+L + QG ++GFLGPNGAGK+TT++ML+GL KPT+G+I I G +LN KN+   LK+
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  78   VGAVVENPELYKYLSGRENIMQIARLRSVSkkevekviklvglekRIDDKVSKYSLGMKQ  137
            +G+++E+P  Y  L+G EN+  + RL  ++KK+V+  +K+V LE++ + KVS+YSLGMKQ
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQ  139

Query  138  RLGLAVALIGSPKLLILDEPTNGLDPTGILEFReiikkaskekeisVFISSHILSEIQNL  197
            RLG+A+A++  PKLLILDEPTNGLDP+GI E+RE+IK  +    ++V+ISSH+LSEI+++
Sbjct  140  RLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQI  199

Query  198  CDKVAFINEGKI---KSIEKMDNKGIYQGKDDIILKTKSPVNIVLDIIKTLPYVIRSKEN  254
               +++IN+G +    SI  ++N+    G+ +I +KTK+ V+    +++T  Y+   ++ 
Sbjct  200  ATSIGIINHGELVFQDSIKELHNR----GQSQIAIKTKNVVS-AQKLLNTKGYMSLIQDG  254

Query  255  GEEIILLVEKDMTSKLIKKLVSENIEICEVYKNKQELEERYIELM  299
               I  L + D+ +K+   LV  NI++  +  +K+ LE+ ++EL+
Sbjct  255  YLTIENLKDSDV-AKINGMLVHSNIDVFRIEEHKKSLEDIFLELL  298

470) Bcoa_2159 in NC_016023


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  150 bits (551),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 115/272 (43%), Positives = 183/272 (68%), Gaps = 4/272 (1%)

Query  29   VMPGEVFGFLGPNGAGKTTTIRMLTGLIRPTSGKILIGGKNVR-TEFTEAMKNLGCIVEN  87
            V  G V+GFLGPNGAGK+TT++ML GL +PT G+I I GK++   +    +K++G ++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  88   PEMYPFLTGYENLAYFARMDPSIPRNRLDEVAALVGLTGRIHDKVKTYSLGMRQRLGIAQ  147
            P  Y  LTG EN++   R+   +P++ ++E   +V L  + + KV  YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  148  ALLGNPKLLILDEPTNGLDPAGIREMREFIRSLAEKAhlsvlvsshllsEVQLMCDKVAI  207
            A++  PKLLILDEPTNGLDPAGI E+RE+I+SL+EK  ++VL+SSHLLSE++ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  208  IHNGQVIRTGNVHELLS-EKARTFWKVAPIEKARTLLQAETQVAEGEDGLL-VTPYDEEK  265
            I++G+++  +++ EL +  +++   K   +  A+ LL++   ++  +DG L +    +  
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  266  NALWNEMLVQNGVRVKEMKAVLPALEDLFLEL  297
             A  N MLV++ + V  +     +LED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

471) bcrA in NC_019954


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  150 bits (552),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 200/298 (68%), Gaps = 8/298 (2%)

Query  62   HLMIETRQLTKVYGEQTVVSKVNLHVQKGRIYGLLGRNGAGKTTIMKMILGLTSITSGEA  121
            +++I T++L+K Y     V  ++L+V +G +YG+LG NGAGK+T +KM+LGL+  T G+ 
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  122  FVFGQNIKGNEK-RIYPRIGAIIETPGFYPNLTGTENLEIFAKLRGTSKPNAVKEALGVV  180
             ++G++++ +++  I   IG++IE+P++Y +LTG EN+ I  +L + +K + V+EAL +V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKIV  120

Query  181  GLPYKDKKIFSKYSLGMKQRLGIANAILHDPELLILDEPTNGLDPIGISEVRNFIRDLCV  240
             L  + +K  S+YSLGMKQRLGIA AI+  P LLILDEPTNGLDP GI E+R++I+ L  
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  241  ERGKTillsshilseisllADDIGIIHNGVLLEENSLAELQKKNGKYILLQVSDTAKAAL  300
              G T+L+SSH+LSEI  +A  IGII++G L+ ++S+ EL+++       Q++  +K  +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQS----QIAIKTKNVV  236

Query  301  VLERRFHVKEY-SVQDDHTLRLYE-TALDMAEINKTLMLENISVTSSQLCNDTLEDYF  356
              ++ ++ K Y S+ +D  L + +    D+A IN  L+  NI V   +  + +LED F
Sbjct  237  SAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

472) TepRe1_0964 in NC_015519


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  150 bits (552),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 200/298 (68%), Gaps = 8/298 (2%)

Query  62   HLMIETRQLTKVYGEQTVVSKVNLHVQKGRIYGLLGRNGAGKTTIMKMILGLTSITSGEA  121
            +++I T++L+K Y     V  ++L+V +G +YG+LG NGAGK+T +KM+LGL+  T G+ 
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  122  FVFGQNIKGNEK-RIYPRIGAIIETPGFYPNLTGTENLEIFAKLRGTSKPNAVKEALGVV  180
             ++G++++ +++  I   IG++IE+P++Y +LTG EN+ I  +L + +K + V+EAL +V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKIV  120

Query  181  GLPYKDKKIFSKYSLGMKQRLGIANAILHDPELLILDEPTNGLDPIGISEVRNFIRDLCV  240
             L  + +K  S+YSLGMKQRLGIA AI+  P LLILDEPTNGLDP GI E+R++I+ L  
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  241  ERGKTillsshilseisllADDIGIIHNGVLLEENSLAELQKKNGKYILLQVSDTAKAAL  300
              G T+L+SSH+LSEI  +A  IGII++G L+ ++S+ EL+++       Q++  +K  +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQS----QIAIKTKNVV  236

Query  301  VLERRFHVKEY-SVQDDHTLRLYE-TALDMAEINKTLMLENISVTSSQLCNDTLEDYF  356
              ++ ++ K Y S+ +D  L + +    D+A IN  L+  NI V   +  + +LED F
Sbjct  237  SAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

473) ABC3556 in NC_006582


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  150 bits (552),  Expect = 6e-38, Method: Compositional matrix adjust.
 Identities = 94/233 (41%), Positives = 160/233 (69%), Gaps = 5/233 (2%)

Query  1    MEKIIETKNLTKKIKGKPLVEEINLSIAKGEICGLIGPNGAGKTTIMKLLTGLLIPTSGE  60
            ME II T+ L+K  +    V +I+L +++G + G++GPNGAGK+T +K+L GL  PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VKLNQWNVH-KQRKEAMRSVGAIIESPIFFEFMTGRGMLLNLARLHGLNKQERQDKVAEA  119
            +++   +++ K+R   ++ +G++IESP ++  +TG   +  + RL +L K++    V EA
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN----VNEA  116

Query  120  LTIVGLDGRGDEKIRTYSLGMKQRLGIAQALLGNPEIVILDEPANGLDPMGMRELRELIL  179
            L IV L+ + + K+  YSLGMKQRLGIA A++  P ++ILDEP+NGLDP G+ E+RELI 
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  180  QLNKEKNITFLISSHLLDELQKICSTLVIIKQGNVLFYGKQEEIYDKTENNLE  232
             L     +T LISSHLL E+++I +++ II++G+++F +   E+ ++ ++++ 
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA  229

474) CLM_0296 in NC_012563


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  149 bits (550),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 101/225 (45%), Positives = 158/225 (71%), Gaps = 2/225 (0%)

Query  3    EYIIRSRNITKIYKKRKVLDNISINIKKGDIYGFVGRNGAGKTTMIRVLTGLVIPNGGQV  62
            E IIR++ ++K Y+K   + +I + + +G +YGF+G NGAGK+T +++L GL  P  G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   ELFGHS-EEKKVIKERRRIGTLIESPELYLNMTAKENLELIKIQRGIPGTKCIDEVLNLV  121
            +++G   +EK+ I   + IG+LIESP  Y ++T+ EN+ +++   ++P  K ++E L++V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKIV  120

Query  122  GLNNVGKKKTKNFSLGMKQRLGIAMALLSDPELLILDEPINGLDPIGIKEIREILLKLNK  181
             L+N  +KK  ++SLGMKQRLGIAMA++  P LLILDEP NGLDP GI EIRE++  L  
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  182  ERGTTILISSHILSELTQISNRYGFINDGKLIEEVAASELSNKCR  226
              G T+LISSH+LSE+ QI+   G+IN+G L+ + +  EL N+ +
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQ  225

475) GYMC10_4498 in NC_013406


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  149 bits (547),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 99/224 (45%), Positives = 165/224 (74%), Gaps = 2/224 (0%)

Query  1    METMIQIHQVSKVYKGTETITNVNMNVRRGEIYGFLGPNGAGKTTIMKMILNLVKPSSGE  60
            ME +I+ +++SK Y+    + ++++ V +G +YGFLGPNGAGK+T +KM+L L KP+ G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IRVFDQPVLPTS-FQFLKRIGSIIEYPVFYDRLTAEANLDLHCRYVGYHNKSAIKEALEI  119
            I ++++ +   + + +LK IGS+IE P +Y++LT+  N+ +  R ++  +K+ ++EAL I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKI  119

Query  120  VGLHGVGKKKIHEFSLGMKQRLGIARAIVTKPDILILDEPINGLDPIGIKDIRELLLLFK  179
            V L+   +KK+ ++SLGMKQRLGIA AI+  P +LILDEP NGLDP GI +IREL+  + 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  KNYGTTilisshivseiesvADTIGIIHQGQLLTEVKMEDIRGQ  223
             +YG T+LISSH++SEI+ +A +IGII++G+L+ +  + +++ +
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

476) EUBREC_3044 in NC_012781


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  149 bits (550),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/211 (43%), Positives = 149/211 (71%), Gaps = 4/211 (1%)

Query  8    IVKTNNLSKSYNKKTVINSCNMSVKKGRIYCLVGQNGAGKTTLFKILLGLTSATQGTATV  67
            I++T+ LSK YNK   ++  ++ V +G +Y ++G NGAGK+T +K+LLGL+ +TQG   +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  68   LGMD-CKNESLEILARTGSLIETPVFYEHISARKNLKIHLEYMDCKDADKKIESILEKVG  126
            LG +   ++ + IL   GSLIE+P +Y H+++  N+ I    +D   + K+++  L  V 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL--PKKNVNEALKIVR  121

Query  127  LKDSADQHVSTFSLGMRQRLAIARALVHEPSLLILDEPINGMDPVGIRDMRELFRNLSEQ  186
            L +  ++ VS +SLGM+QRL+IA A++  P LLILDEP NG+DP GI ++REL+++L+E+
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  187  -GVTILMSSHFLSEVELVADDIGFLVNGTIV  216
             G+T+L+SSH+LSE++ +A  IG++ +G +V
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELV  212

477) Ccur_04150 in NC_013170


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 103/218 (48%), Positives = 157/218 (73%), Gaps = 9/218 (4%)

Query  5    ILETQKLVKRFGCGKRAQQAVDELSLHVEEGKVYGLLGPNGAGKSTTLKMITGMLHPTEG  64
            I+ TQ+L K +    R    V ++ L+V +G VYG+LGPNGAGKSTTLKM+ G+  PT+G
Sbjct  4    IIRTQRLSKEYNKIFR----VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQG  59

Query  65   RILFEGHPWQRDD----LYRIGSLVESAPLYPNLTAKENLRVRTTLLGLPHSRIDEVLAT  120
             I + G   +  +    L  IGSL+ES++ Y +LT+ EN+ +   LL+LP   ++E L  
Sbjct  60   NINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKI  119

Query  121  VDLTDTGSKRAGRFSMGMKQRLGIalallahprllilDEPTNGLDPIGIEDLRNLIRRFP  180
            V L +  +K+ +++S+GMKQRLGIA+A++  P+LLILDEPTNGLDP GIE++R+LI+ +P
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  181  EQ-GITVLLSSHILTEVQHTADTVGIIVNGRLAYEDDL  217
            E+ G+TVL+SSH+L+E+++ A ++GII +G L ++D +
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSI  217

478) BXY_04430 in NC_021017


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 91/220 (42%), Positives = 155/220 (71%), Gaps = 5/220 (2%)

Query  12   LTKQYGNFTAVDHIRLNIRKGEIFGLLGPNGAGKSTTILMMLGLTEPTSGTVEICGIN-S  70
            L+K+Y ++  V +I L + +G ++G+LGPNGAGKSTT+ M+LGL+ PT G ++I G + +
Sbjct  10   LSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELN  69

Query  71   TTHPIEVKRRIGYLPEDVGFYDDMTGPENLIYTARLNGIPDKEAKTKAMELMKRVGLEEQ  130
              + I + + IG L E  ++Y+++TG EN+    RL ++P K+ +    E +K V LE+Q
Sbjct  70   EKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVN----EALKIVRLENQ  125

Query  131  LTKKTGKYSRGMRQRLGLADVLIKNPEIIILDEPTSGIDPAGVQEFIELIRWLSKEEGLT  190
              KK ++YS GM+QRLG+A  ++K P ++ILDEPT+G+DPAG++E+ ELI+ L+   G+T
Sbjct  126  KNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMT  185

Query  191  VLFSSHHLDQVQKVCDRVGLFSNGQLLALIDMAELKDKKQ  230
            VL+SSH L +++++   +G++++G+L+    + EL ++ Q
Sbjct  186  VLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQ  225

479) Tmath_1653 in NC_014209


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  147 bits (540),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 97/226 (43%), Positives = 154/226 (69%), Gaps = 5/226 (2%)

Query  3    EAVIELINLTKIYGTQPAVDHLNLTVKTGEVFGLLGPNGAGKTTTILMILGLVEPTQGEA  62
            E +I    L+K Y     V +++L V  G V+G+LGPNGAGK+TT+ M+LGL  PTQG+ 
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   KVLGIN-ATREPLKVKKWVGYLPEDVGFYDDMTGLENLILTARLNGMEDGKAHKTAEELL  121
            ++LG +   ++ + + K +G L E  ++Y+++TGLEN+ +  RL ++    + K  +E L
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL----PKKNVNEAL  117

Query  122  NRVGLKEAINKKVGAYSRGMRQRLGLADALIKKPKMIILDEPTLGLDPEGMREFLNLIRE  181
            + V L +  NKKV+ YS GM+QRLG+A A++K PK++ILDEPT GLDP G+ E+ +LI+ 
Sbjct  118  KIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  182  LSKEEGITVLLSSHHLHQVQEICDRVGIFVKGRLIAQGTISELAKK  227
            L+   G+TVL+SSH L ++++I   +GI+  G L+ Q++I EL ++
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

480) BCO26_2289 in NC_015634


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  146 bits (538),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 119/272 (44%), Positives = 183/272 (68%), Gaps = 4/272 (1%)

Query  29   VMPGEVFGFLGPNGAGKTTTIRMLTGLIRPTSGKIFIGGKNVR-TEFTEAMKNLGCIVEN  87
            V  G V+GFLGPNGAGK+TT++ML GL +PT G+I I GK++   +    +K++G ++E+
Sbjct  27   VPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLIES  86

Query  88   PEMYPFLTGYENLAYFARMDPSIPKNRLDEVAALVGLSSRIHDKVKTYSLGMRQRLGIAQ  147
            P  Y  LTG EN++   R+   +PK+ ++E   +V L ++ + KV  YSLGM+QRLGIA 
Sbjct  87   PSYYGHLTGLENMTIMQRL-LDLPKKNVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAM  145

Query  148  ALLGNPKLLILDEPTNGLDPAGIREMREFIRSLAEKehlsvlvsshllsevQLMCDKVAI  207
            A++  PKLLILDEPTNGLDPAGI E+RE+I+SL+EK  ++VL+SSHLLSE++ +   ++I
Sbjct  146  AIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGI  205

Query  208  IHNGRVVRTGNVHELLS-EKARTFWKAVPAEKARTLLQAETQVAEGEDGLL-ITPYDEEK  265
            I++G +V  +++ EL +  +++   K+     A+ LL++   ++  +DG L I    +  
Sbjct  206  INHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTIENLKDSD  265

Query  266  NALWNEMLVQNGVRVKEIKAVLPALEDLFLEL  297
             A  N MLV++ + V  I     +LED+FLEL
Sbjct  266  VAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

481) BT_0925 in NC_004663


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 91/220 (42%), Positives = 155/220 (71%), Gaps = 5/220 (2%)

Query  11   LTKQYGKFTAVDHIRLSIRKGEIFGLLGPNGAGKSTTILMMMGLTEPTSGIVEICGIN-S  69
            L+K+Y K+  V +I L + +G ++G+LGPNGAGKSTT+ M++GL+ PT G ++I G + +
Sbjct  10   LSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELN  69

Query  70   TTHPIEVKRKIGYLPEDVGFYDDMTGLENLMYTARLNGIPDKEAKVKALELMKRVGLEDQ  129
              + I + + IG L E  ++Y+++TGLEN+    RL ++P K+ +    E +K V LE+Q
Sbjct  70   EKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVN----EALKIVRLENQ  125

Query  130  LKKKTGKYSRGMRQRLGLADVLIKNPEIIILDEPTSGIDPAGVQEFIELIRWLSKEEGLT  189
             +KK ++YS GM+QRLG+A  ++K P ++ILDEPT+G+DPAG++E+ ELI+ L+   G+T
Sbjct  126  KNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMT  185

Query  190  VLFSSHHLDQAQKVCDRVGLFSNGKILALIDMAELKEKKQ  229
            VL+SSH L + +++   +G++++G ++    + EL ++ Q
Sbjct  186  VLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQ  225

482) GWCH70_1811 in NC_012793


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  146 bits (538),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 115/279 (42%), Positives = 193/279 (70%), Gaps = 4/279 (1%)

Query  23   IKGISFELKEGEVFGFLGPNGAGKTTTIRMLVGLIKPTSGHISICGYDLEHQFTKAI-RH  81
            +K+I + + +G V+GFLGPNGAGK+TT++ML+GL KPT G+I+I G +L+++   +I ++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  82   IGCIVENPELYPYLSGWENLEHFARMVPDIPKERIMEVVELVGLQNRIHDRVNTYSLGMR  141
            IG ++E+P  Y  L+G EN+    R++ D+PK  + E + +V L+N+ + +V+ YSLGM+
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKIVRLENQKNKKVSQYSLGMK  138

Query  142  QRLGIAQALLGKPKVLILDEPTNGLDPAGIREMRQFIRFlaeserlsvlvsshllseIQL  201
            QRLGIA A++  PK+LILDEPTNGLDPAGI E+R++I+ L+E   ++VL+SSHLLSEI+ 
Sbjct  139  QRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQ  198

Query  202  MCDRVAIMAKGLLLRVDTVERLL-KEQARVVWKAAPIETAKEILEKETSPVAIQGDRL-V  259
            +   ++I+  G L+  D++  L  + Q+++  K+  + +A+ +L+       IQ++ L +
Sbjct  199  IATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLLNTKGYMSLIQDGYLTI  258

Query  260  TPYERKNLAIWNKKLVEAGVHVHEIQPKLPTLEDLFIEL  298
                  ++A  N  LV++ ++V  I+    +LED+F+EL
Sbjct  259  ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

483) ANT_28230 in NC_014960


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  146 bits (538),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 92/227 (41%), Positives = 157/227 (70%), Gaps = 6/227 (2%)

Query  1    MRDVIVTRDLTKRYGEFTAVDRLNLTVRQGEVFGLLGPNGAGKTTTILMILGLTEPSAGQ  60
            M  +I T+ L+K Y  +  V  ++L V QG V+G+LGPNGAGK+TT+ M+LGL+ P+ G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IEVLGYD-PARQPLTVKSRVGYLPDQVGFYDELTALENLHYIARLNGLNGKNAETRMQTA  119
            I++LG +   ++ +++   +G L +  ++Y++LT+LEN+  + RL +L  KN +     A
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVN----EA  116

Query  120  LEKVGLQSVANKRVGAFSRGMRQRLGVAEVLLKQPEIIIMDEPTQGLDPEGAREFLQLVQ  179
            L  V L++  NK+V+ +S GM+QRLG+A  ++K P ++I+DEPT+GLDP G  E+ +L++
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  180  SLKEE-GITILLSSHLLHQVQAICDRVGLFNRGRMELVGTVDELARR  225
            SL E  G+T+L+SSHLL +++ I   +G++N+G + + +++ EL  R
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

484) Sros_4674 in NC_013595


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 87/214 (41%), Positives = 150/214 (71%), Gaps = 4/214 (1%)

Query  5    HCVSKTYKGVKALDEVSFTVEAGSVTGFLGPNGAGKSTALRILTGLSRPTSGSATVFGRP  64
            + +SK Y+ +  + ++ + V  G+V GFLGPNGAGKST+L++L GL++PT G+  ++G+ 
Sbjct  8    QRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKE  67

Query  65   YAELACPG--RRVGTLLDASALHPGRSGREVLTLGAMILGLPRSRVEESLELVGLTGKEG  122
              E    +  + +G+L+++++     +G E +T+   +L+LP+  V+E+L +V L  +  
Sbjct  68   LNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKN  127

Query  123  RRTVGGYSLGMRQRLGIAHALLGRPEALVLDEPANGLDPQGIQWMRGLLRSLADS-GCAV  181
            ++ V+ YSLGM+QRLGIA A++  P  L+LDEP+NGLDP GI+ +R L++SL++  G +V
Sbjct  128  KK-VSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  182  LLSSHLLHEVEQVADQIVMIGRGRLLARGTVAEL  215
            L+SSHLL E++Q+A  I +I +G L+ ++++ EL
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

485) PM3016_4107 in NC_016935


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 88/213 (42%), Positives = 140/213 (66%), Gaps = 2/213 (0%)

Query  1    MTKAIEITGLTKVYSNGRGISDLNLEIDTGDIFGFLGPNGAGKTTAMKMMAGLVKPDRGD  60
            M   I    L+K Y++   + D++L +  G ++GFLGPNGAGK+T++KM+ GL KP +G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VRIFGASVFEDY-VQAMKPVGCMIETAESYPYMTANDNLKLFARFYPDIDQRRIDECLEI  119
            + I+G  + E   +  +K +G +IE++  Y  +T+ +N+ +  R+  D+ ++ ++E L I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  TGMLKYKNEKSRKFSLGMKQRLGIAAAILSRPKLLVLDEPLNGLDVEGMLEMRKLIKRLS  179
              + + KN K  ++SLGMKQRLGIA AI+  PKLL+LDEP NGLD  G+ E+R LIK L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  QDEGTTFFISSHLIHDVELTCNRIGVVYGGKLV  212
            +  G T +ISSHL+ +++     IG++  G LV
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELV  212

486) B2K_21335 in NC_017672


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 89/213 (42%), Positives = 140/213 (66%), Gaps = 2/213 (0%)

Query  1    MTKAIEITGLTKVYSNGRGISDLNLEIDTGDIFGFLGPNGAGKTTAMKMMAGLVKPDRGD  60
            M   I    L+K Y++   + D++L +  G ++GFLGPNGAGK+T++KM+ GL KP +G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VRIFGASVFEDY-VQAMKPVGCMIETAESYPYMTANDNLKLFARFYPDIDQRRIDECLEI  119
            + I+G  + E   +  +K +G +IE++  Y  +T+ +N+ +  R+  D+ ++ ++E L I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  TGMLKYKNEKSRKFSLGMKQRLGIAAAILSRPKLLILDEPLNGLDVEGMLEMRKLIKRLS  179
              + + KN K  ++SLGMKQRLGIA AI+  PKLLILDEP NGLD  G+ E+R LIK L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  QDEGTTFFISSHLIHDVELTCNRIGVVYGGKLV  212
            +  G T +ISSHL+ +++     IG++  G LV
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELV  212

487) KNP414_04701 in NC_015690


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 89/213 (42%), Positives = 140/213 (66%), Gaps = 2/213 (0%)

Query  1    MTKAIEITGLTKVYSNGRGISDLNLEIDTGDIFGFLGPNGAGKTTAMKMMAGLVKPDRGD  60
            M   I    L+K Y++   + D++L +  G ++GFLGPNGAGK+T++KM+ GL KP +G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VRIFGASVFEDY-VQAMKPVGCMIETAESYPYMTANDNLKLFARFYPDIDQRRIDECLEI  119
            + I+G  + E   +  +K +G +IE++  Y  +T+ +N+ +  R+  D+ ++ ++E L I
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  TGMLKYKNEKSRKFSLGMKQRLGIAAAILSRPKLLILDEPLNGLDVEGMLEMRKLIKRLS  179
              + + KN K  ++SLGMKQRLGIA AI+  PKLLILDEP NGLD  G+ E+R LIK L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  QDEGTTFFISSHLIHDVELTCNRIGVVYGGKLV  212
            +  G T +ISSHL+ +++     IG++  G LV
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELV  212

488) AF1136 in NC_000917


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 94/228 (42%), Positives = 157/228 (69%), Gaps = 4/228 (1%)

Query  4    IEVENLTKVFNGFRALDGISLVVERGEIFGFLGPNGAGKTTTINCCLGLIKPTSGSVRIA  63
            I  + L+K +N +  + +I L V +G ++GFLGPNGAGK+TT++  LGL KPT G++ I 
Sbjct  5    IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINIL  64

Query  64   GMDVEEK-PVEVKEICGYLPENYGFYPNLTARQNLLYFSEFYANPKDNVDELLALVGLQD  122
            G +++EK  + +    G L E+ ++Y +LT+ +N+     +   PK NV+E L +V L++
Sbjct  65   GKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLEN  124

Query  123  SADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQGIADFRKIIRELNQK-GK  181
              +KKV+++S GMKQRL++A A+++ P +++LDEPTNGLDP GI ++R +I+ L +K G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  182  TFFFSSHILSEVREVCSVVGIINRGRIVKVGKISELS--GSMEVVVQT  227
            T ++SSH+LSE+ ++ + +GIIN+G +V  + I EL   G  ++ ++T
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKT  232

489) SGR_2962 in NC_010572


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  145 bits (533),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 110/257 (43%), Positives = 169/257 (66%), Gaps = 8/257 (3%)

Query  46   VIRTRGLTKRYRGGQLAVDSLDLTVPGGTVFGFLGPNGSGKTTTIRMLMGLISPTFGTAE  105
            +IRT+ L+K Y    + V  +DL VP G+V+GFLGPNG+GK+TT++ML+GL  PT G  +
Sbjct  4    IIRTQRLSKEY-NKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  106  VLGRPMPGDGR-TVLPEVGALIEGPALYGFLDGRENLLCYDRADPTADPRTRGARVDGAL  164
            +LG+ +    R ++L ++G+LIE+P+ YG L G EN+   +R      P+     V+ AL
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRL--LDLPKK---NVNEAL  117

Query  165  ERVGLsaasrkkakaysLGMKQrlglaaallrprrllvlDEPTNGLDPQGMREIRALVRE  224
              V L     KK   YSLGMKQRLG+A A+++  +LL+LDEPTNGLDP G+ EIR L++ 
Sbjct  118  KIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  225  LAAE-GTTVFLSSHLLDEIEQVCTHAAVMARGRLVVQGTVADLAAGSRGRLAVTTPDPGD  283
            L+   G TV++SSHLL EI+Q+ T  +++ +G LV Q+++ +L   +++++A+ T +   
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVS  237

Query  284  AARILAEHGLTGLSADG  300
            A ++L   G  +L  DG
Sbjct  238  AQKLLNTKGYMSLIQDG  254

490) BJ6T_20250 in NC_017249


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  145 bits (532),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 95/226 (43%), Positives = 153/226 (68%), Gaps = 6/226 (2%)

Query  4    EFIIEARGLAKQYGPHVAVDGIDLQVRAGEVIGLLGPNGAGKTTTILMLLGLTEATRGSI  63
            E II ++ L+K+Y     V +IDL+V  G V G+LGPNGAGK+TT+ MLLGL+ +T+G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   LILGKD-PLRRPLEVKRDVGYLPDSVGFYETMTGRENLTYMARLAAIPRGVVGERINSVL  122
             ILGK+   +  + + +D+G L +S ++Y  +TG EN+T M RL  +P+      +N  L
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK----KNVNEAL  117

Query  123  ASVHLLEVADRPVATYSRGMRQRLGIAELLMRQCRIAILDEPTSGLDPQSTQELLDLIQK  182
              V+L +  ++ V+ YS GM+QRLGIA  +M+  ++ ILDEPT+GLDP + +E+ +LI+ 
Sbjct  118  KIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  183  LS-RGGMTILLSSHMLDVVQTVCHRIALFNKGRIGFFGTIEELAAK  227
            L+ + GMT+L+SSH+L  ++ +   I+++N G + F ++I EL  +
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

491) Xcel_0761 in NC_013530


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  144 bits (529),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 92/222 (42%), Positives = 151/222 (69%), Gaps = 4/222 (1%)

Query  1    MITAEHLTRRYGALTAVDDVSFTSEPGRVTGFLGPNGAGKSTVMRMLVGLSRPTSGVARI  60
            +I +++L++ Y  +  V D+ +    G V GFLGPNGAGKST ++ML+GL++PT G   I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  61   LGKPFAALPNPA--RHVGVLLDAAAQHTGRTGREILTLSALMTGVERRRVDEVLQIVGLT  118
            LGK +      +  +++G L+++++     TG E +T+   + ++ ++ V+E L+IV L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL-  122

Query  119  DREAARRVGTYSLGMRQRLGIANALLGDPEVLILDEPANGLDPGGIRWMRDLLADFAGK-  177
            + +  ++V+ YSLGM+QRLGIA A++  P +LILDEP+NGLDP+GI  +R+L+  ++ K 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  178  GGTVLLSSHLLGEIERVADDLVIIGGGRIVAQGSKEQLLARA  219
            G TVL+SSHLL+EI+++A  + II  G +V Q+S  +L  R+
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRG  224

492) Dehly_0486 in NC_014314


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  144 bits (529),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 87/214 (41%), Positives = 153/214 (72%), Gaps = 8/214 (3%)

Query  13   LSKSFGCQEALKEVSLGIPKGAIFGLLGPNGAGKSTIISILLGLTRSTSGTFSLFDQQGN  72
            LSK +     +K++ L +P+GA++G+LGPNGAGKST + +LLGL+++T G +++++++ N
Sbjct  10   LSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELN  69

Query  73   GKKLPGLLRQVGTVFEHPVFYPQLSGRLNL----RLLAGAKITEVRIAELAEFVGLQGRL  128
             K+  ++L+++G+++E P +Y +L+G  N+    RLL  +K     + E   +V L+ + 
Sbjct  70   EKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN---VNEALKIVRLENQK  126

Query  129  KDKVGTYSMGMKQRLALALALSGKPKLLILDEPTNGLDPIGIADLRLMIHQVHE-VGTTI  187
            + KV+ YS+GMKQRL++A+A+   PKLLILDEPTNGLDP GI ++R +I  + E  G T+
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  188  LLASHMLTEVEKVCTDVAIMNKGQIAVQGKLSSL  221
            L++SH+L+E++++ T ++I+N G++  Q+ +  L
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

493) Ocepr_0793 in NC_014761


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  144 bits (528),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 91/224 (41%), Positives = 151/224 (68%), Gaps = 6/224 (2%)

Query  1    MMTAIETQGLSKRYGDLVAVDGLDLHVEQGEVFGLLGPNGSGKTTTILMLLGLTEPTSGR  60
            M   I TQ LSK Y  +  V ++DL+V QG V+G+LGPNG+GK+TT+ MLLGL+ PT G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VRVLGHD-PVREPLSVKRRVGYLPDTVGFYDDLSGRENLRYTAALNGMRGPGVDARIDEA  119
            + +LG +   ++ +S+ + +G L ++ ++Y++L+G EN+     L ++    V    +EA
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNV----NEA  116

Query  120  LDSMGLTDAADRPVRTYSRGMKQRLGLADVLLKEPQLVILDEPTLGLDPQAAHEFLGLIR  179
            L  + L +  ++ V  YS GMKQRLG+A  ++K P+L+ILDEPT GLDP + +E+  LI+
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  180  ALGDR-GLTVLLSSHLLHQVQTVTDRVGLFRKGRMALVGSVPEL  222
            +L ++ G+TVL+SSHLL +++ ++  +G++  G + + +S+ EL
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

494) Aboo_0816 in NC_013926


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  143 bits (526),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 155/221 (71%), Gaps = 2/221 (0%)

Query  1    MYLEAINLSKKYGNFYALRNLNLRVEGGKCVGYLGPNGAGKTTTLKIFTNLLRPTSGDAI  60
            M + +  LSK Y +++ +++++LRV  G   G+LGPNGAGK+TTLK++  L +PT G+  
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   INGYSV-QKELKKALKDVGTLIETPNFYPYLIPMEILSMLCDIRGATRKDILEALKKVRL  119
            I G  + +K+    LKD+G+LIE+P++Y  L  +E ++++  + +  +K++ EALK VRL
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  120  YEWRNTKVKKFSKGMTQRLAMAVALVTNPSIMILDEPTTGMDPQGMAEIREiikdlkkd-  178
             + +N KV ++S GM QRL++A+A++  P ++ILDEPT G+DP G+ EIRE+IK L    
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  179  gkliFMSSHLLPEITDVCDEVAMINKGTLLLYDTIENVSSK  219
            G  +++SSHLL+EI ++   +++IN G L++ D+I ++ ++
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

495) COB47_0879 in NC_014392


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  143 bits (525),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 158/228 (70%), Gaps = 8/228 (3%)

Query  1    MISLLKVINLHKSFGNVKALKGISFEVKPATVHGFLGPNGAGKTTTMKILSGLISFDKGT  60
            M  +++   L K + ++  +K+I + V  ++V GFLGPNGAGK+TT+K+L GL    +G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   I--LFENLNFKTSKSEIVRQIGYLPQNPTFYGYLTPVEYLSLIGQICNFESRTIKKRTEE  118
            I  L  +LN   ++  I+++IG L ++P++YG LT +E ++++ ++ ++     KK  +E
Sbjct  61   INILGKELN-EKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP----KKNVNE  115

Query  119  VLEIVKLSNVSKRKISTFSGGMLQRLGIAVAIFNRPKLLLLDEPTASLDPEGRAEVLEHI  178
             L IV+L N  ++K+S +S GM QRLGIA+AI + PKLL+LDEPT +LDP G  E+ E I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  179  KSLKEE-GITVFFSTHILSDVERICDHVSILHEGKVIVSDSLENLQKR  225
            KSL E  G+TV++S+H+LS++++I   ++I+++G ++  DS+ +L++R
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

496) O3I_005615 in NC_018681


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 92/217 (43%), Positives = 153/217 (71%), Gaps = 5/217 (2%)

Query  8    QLHKHYGKHRALDGVELSVRTGEVYGLLGPNGAGKSTLMKTVLGLQRPTSGHIQLFGRPY  67
            +L K+Y K   + +++L V  G VYG+LGPNGAGKST +K +LGL +PT G+I+++G+  
Sbjct  9    RLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKEL  68

Query  68   HRAQ----LVDVGALIETPGLWPKLDALTHLRIHAKLRGVPEAWIDEALAVVQLNDVRDR  123
            +  +    L D+G+LIE+P+    L +L ++ I  +L ++P   ++EAL +V+L++ +++
Sbjct  69   NEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNK  128

Query  124  KIQAFSLGMRWRLGIaiallarpkllllDEPTNGLDPVGIREMRGIIRSLAAN-GTTVFI  182
            K+  +SLGM+ RLGIA+A++  PKLL+LDEPTNGLDP GI E+R +I+SL+ + G TV+I
Sbjct  129  KVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLI  188

Query  183  SSHQLSEIAQVCDRVAVLVAGKTRYEGTLEGIAGDGD  219
            SSH LSEI Q+   ++++  G   +++++  +   G+
Sbjct  189  SSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQ  225

497) H04402_01313 in NC_017299


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 96/221 (44%), Positives = 154/221 (70%), Gaps = 2/221 (0%)

Query  7    IEIHDLTKEIDGKAILSGITMNVKKGEIYGFLGANGAGKTTLMKTIYGILKPTSGSICIF  66
            I  + L+KE +    + +I + V +G +YGFLG+NGAGK+T +K + G+ KPT G+I I+
Sbjct  5    IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINIL  64

Query  67   GNELKENN-CAVFRKMGSLIEIPVFYHNFSAYKNLELHCGYMGAQYIQNIKKVLDMTGIR  125
            G+EL+E+N  ++++ +GSLIE P +Y ++++  N+ +    ++    +N++  L +  + 
Sbjct  65   GKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKIVRLE  123

Query  126  NQGDKPVKEFSLGMKQRLALARAILTNPELLILDEPINGLDPQGIIEIRELLLQINRKNG  185
            NQ +K V ++SLGMKQRL++A AI+  P LLILDEP NGLDP GI EIREL+  +  K G
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  186  TTILISSHILSEMAKIADRIGVIDKGIILKEISMTEIVDKG  226
             T+LISSH+LSE+ +IA  IG+I+ G ++ + S+ E+ ++G
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRG  224

498) Calkr_1720 in NC_014721


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  143 bits (526),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 95/228 (42%), Positives = 156/228 (69%), Gaps = 8/228 (3%)

Query  1    MISLLKVINLHKSFGKVKALKGISFEVKPATVHGFLGPNGAGKTTTMKILSGLISFDEGT  60
            M  +++   L K + K+  +K+I + V  ++V GFLGPNGAGK+TT+K+L GL    +G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   I--LFDNLNFKTNKKDIVKQIGFLPQNPVFYGYLTPVEYLSLIGQICNFESRTIKKRTEE  118
            I  L  +LN   N+  I+K+IG L ++P +YG LT +E ++++ ++ ++     KK  +E
Sbjct  61   INILGKELN-EKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP----KKNVNE  115

Query  119  VLEIVKLSNVSKRKISTFSGGMLQRLGIAVAIFNKPKLLLLDEPTASLDPEGRAEVLEHI  178
             L IV+L N  ++K+S +S GM QRLGIA+AI + PKLL+LDEPT +LDP G  E+ E I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  179  RSLKEE-GITVFFSTHILSDVERICDHVTILHEGKVIVSDSLENLQKR  225
            +SL E  G+TV++S+H+LS++++I   + I+++G ++  DS+ +L++R
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

499) Sinf_0951 in NC_016826


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/215 (44%), Positives = 149/215 (70%), Gaps = 8/215 (3%)

Query  6    KHIKKVFKDKEVLNDISFTIESGSICGLLGVNGAGKSTLMKILYGLESQSAGEILFDGKT  65
            K+ +K+F+ K    DI + +  G++ G+LG NGAGKST +K+L GL   + G+I + GK 
Sbjct  12   KEYNKIFRVK----DIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKE  67

Query  66   SKE---IKDDKKFGALIESPAIYMNLSAFDNLKTKALLYDIPDETIRETLNLIGLANTGR  122
             +E   I   K +G+LIESP+ Y +L++++N+     L D+P   + E+L+++ L N   
Sbjct  68   LNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKN  127

Query  123  KKAGKFSLGMKQRLGLGMAIITNPEFLILDEPTNGLDPDGIKELLDLINSLKQK-EMTIL  181
            KK +++SLGMKQRLG++MAI+  P +LILDEPTNGLDP GI E+ +LI+SL +K  MT+L
Sbjct  128  KKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVL  187

Query  182  ISSHQLHEVSKIADDIVILHQGKIHYNQPNQDKQD  216
            ISSH L E+ +IA  I I+++G + ++++ ++ ++
Sbjct  188  ISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

500) Clopa_1542 in NC_021182


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (522),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/213 (43%), Positives = 148/213 (70%), Gaps = 2/213 (0%)

Query  1    MDKVLEVAELTKFYKNGRGVKNISFDVYKGDVFGFLGPNGAGKTTVMKSITGLNSFQSGK  60
            M+ ++    L+K Y++   VK+I + V +G V+GFLGPNGAGK+T +K + GL     G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IKILGYDLCTQFEAA-LKNVGSIIETAEVYEYISAYANLKFVSRFHKNINEANIEEALDM  119
            I+ILG +L  +   + LK++GS+IE++  Y  +++  N+ ++ R+  ++   N++EAL +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLL-DLPKKNVNEALKI  119

Query  120  VNLTEYKKEKVSKFSLGMKQRLAIARALLANPKLIILDEPTNGLDIEGTVQLRNLIIELA  179
            V L + K+ KVS++SLGMKQRL+IA A++  PKL+ILDEPTNGLD  G  ++R+LI  L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  NKKKTTFFISSHLVHEIELMCNKVAIIHNGKLI  212
            +K   T +ISSHL+ EI+ +   ++II++G L+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELV  212

501) nisF in NC_013656


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (522),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 90/214 (43%), Positives = 151/214 (71%), Gaps = 8/214 (3%)

Query  1    MQVKIQNLSKTYKEKQVLQDISFDIKSGTVCGLLGVNGAGKSTLMKILFGLISADTGKIF  60
            M ++ Q LSK Y+    ++DI + +  G+V G+LG NGAGKST +K+L+GL  +  G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDGQEKTNN-------QLGALIEAPAIYMNLSAFDNLKTKALLFGISDKRIHETLEVIGL  113
            + G+E  ++       ++G+LIE+P+ Y +L++++N+     L++++ K ++E+L ++ L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  114  AETGKKRAGKFSLGMKQRLGIGMAILTEPQFLILDEPTNGLDPDGIAELLNLILKLKAK-  172
             +  +K+ +++SLGMKQRLGI+MAI+  P++LILDEPTNGLDP GI E+ +LI  L  K 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  173  GVTILISSHQLHEISKVASQIIILNKGKICYNHA  206
            G+T+LISSH L EI ++A+ I I+N G + ++++
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDS  216

502) CLS_29420 in NC_021047


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (523),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 118/243 (49%), Positives = 178/243 (74%), Gaps = 2/243 (0%)

Query  5    VIETRNLTKQYETQKSVADLNIHVKKGRIYGLLGRNGAgktttmkmllgltEPTSGTVHI  64
            +I T+ L+K+Y+    V D++++V +G +YG+LG NGAGK+TT+KMLLGL+ PT G ++I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   FGRNIQTNER-TILPRIGSLIESPGFYPNLTGTENLRIFAELRGVPGRDSIRRSLELVGL  123
            +G++++ ++R +IL  IGSLIESP++Y +LTG EN+ I   L ++P + ++  +L +V L
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKIVRL  122

Query  124  PYRDKKLFSQYSLGMKQRLAIALAIMHDPELLILDEPINGLDPIGIAEVRKFIRSLCTER  183
              + +K  SQYSLGMKQRL+IA+AIM  P LLILDEP NGLDP GI E+R +I+SL    
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  184  GKTILISSHILSEialladdigiidHGVlleeesleeleQRNGRYIHFRISDAAQAGRIL  243
            G T+LISSH+LSEI  +A  IGII+HG L+ ++S+ EL++R    I ++  +   A ++L
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL  242

Query  244  ETQ  246
            +T+
Sbjct  243  NTK  245

503) CK1_03970 in NC_021014


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (523),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 131/295 (45%), Positives = 206/295 (70%), Gaps = 6/295 (2%)

Query  6    IIETKNLTKQYGSQKSVADLNIHVKRGRIYGLLGRNGAgktttmkmllgltkPTSGEVKI  65
            II T+ L+K+Y     V D++++V +G +YG+LG NGAGK+TT+KMLLGL+KPT G+++I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   WGKSLQGNEK-KLLPRIGSLIESPGFYPNLTGTENLRIFATLRGVPNNHAIKDALDLVGL  124
             GK L+ +++  +L  IGSLIESP++Y +LTG EN+ I   L ++P+++ +++AL +V L
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRL  122

Query  125  PYKDKKLFSQYSLGMKQRLAIALAVMHDPELLILDEPINGLDPIGIAEVRSFIRELCDAR  184
              + +K  SQYSLGMKQRL+IA+A+M  P LLILDEP NGLDP GI E+R +I+ L +  
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  185  GKTilisshilseisllADDIGIIDHGalleeeslaeleQKSSKHIRFTISDTAQAARIL  244
            G T+LISSH+LSEI  +A  IGII+HG L+ ++S+ EL++++  +I +   +   A ++L
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL  242

Query  245  ERNFHETHFSIQDDHNLRLHNM-ELPVGKIVTAFVENGLEVSEAHTCEESLEDYF  298
            + +      S+ +D  L ++N+ +  V+KI   +V++ ++V   +    SLED F
Sbjct  243  NTK---GYMSLIQDGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

504) CLD_0528 in NC_010516


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 96/223 (44%), Positives = 153/223 (69%), Gaps = 2/223 (0%)

Query  3    EYVIRSRNITKIYKKRKVLDNISINIKKGDIYGFVGRNGAGKTTMIRVLTGLVIPNEGQV  62
            E +IR++ ++K Y+K   + +I + + +G +YGF+G NGAGK+T +++L GL  P +G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   ELFDHSeekeviker-rriGTLIESPELYLNMTAKENLELIKVQRGIPGTKCIDEVLDLV  121
            ++++   +        + IG+LIESP  Y ++T+ EN+ +++   ++P  K ++E L +V
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKIV  120

Query  122  GLNNVEKKKTKNFSLGMKQRLGIAMALLSDPELLILDEPINGLDPIGIKEIREILLKLNK  181
             L+N  +KK  ++SLGMKQRLGIAMA++  P LLILDEP NGLDP GI EIRE++  L  
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  182  ERGTTILISSHILSELTQISNKYGFINDGKLIEEVAASELSNK  224
              G T+LISSH+LSE+ QI+   G+IN+G L+ + +  EL N+
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

505) Calhy_1045 in NC_014652


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (523),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 96/228 (43%), Positives = 156/228 (69%), Gaps = 8/228 (3%)

Query  1    MISLLKVINLHKSFGKVKALKGISFEVKPATVHGFLGPNGAGKTTTMKILSGLISFDEGT  60
            M  +++   L K + K+  +K+I + V  ++V GFLGPNGAGK+TT+K+L GL    +G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   I--LFENLNYKTNKNAIVKQIGFLPQNPVFYGYLTPVEYLNLIGQICNFESRTIKKRTEE  118
            I  L  +LN K N+ +I+K+IG L ++P +YG LT +E + ++ ++ ++     KK  +E
Sbjct  61   INILGKELNEK-NRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP----KKNVNE  115

Query  119  VLEIVKLSNVSKRKISTFSGGMLQRLGIAVAIFNKPKLLLLDEPTASLDPEGRAEVLEHI  178
             L IV+L N  ++K+S +S GM QRLGIA+AI + PKLL+LDEPT +LDP G  E+ E I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  179  KSLKEE-GITVFFSTHILSDVERICDHVTILHEGKVIVSSSLGNLQKR  225
            KSL E  G+TV++S+H+LS++++I   + I+++G ++   S+ +L++R
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

506) Memar_1342 in NC_009051


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 92/221 (42%), Positives = 149/221 (68%), Gaps = 7/221 (3%)

Query  1    MIRTENLTKVYNGKTAVDGLDLVVGEGEIFGFLGPNGAGKSTTILMLTGMIEPTGGRCFV  60
            +IRT+ L+K YN    V ++DL V +G ++GFLGPNGAGKSTT+ ML G+  PT G   +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  61   DGIEVA-KDPLNVKKIIGYLPEDVGFYGNMTGEQNLDYFARFYGMDAKERKERIAELLEL  119
             G E+  K+ +++ K IG L E  ++YG++TG +N+    R+ ++  K+    + E L +
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN----VNEALKI  119

Query  120  VHLDGV-AQKAGEYSRGMKQRLGLAQALINDPKVLFLDEPTANLDPEGVREYRELVTHLA  178
            V+L+    +K ++YS GMKQRLG+A A+++ PK+L+LDEPT  LDP G+ E REL+  L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  179  GE-GKTIFVSSHILSEVREVCRTVGLLAKGKLAAQGTLEEV  218
               G T+++SSH+LSE+ ++  ++G++  G L  Q+++ E+
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

507) CKL_0036 in NC_009706


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 90/221 (41%), Positives = 154/221 (70%), Gaps = 2/221 (0%)

Query  1    MEKVIELINLSKVYKNGRGIQNVDLDIYRGQIFGFLGPNGAGKTTAMKIMTGLVKPDRGD  60
            ME +I    LSK Y++   ++++DL + +G ++GFLGPNGAGK+T++K++ GL KP +G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VKILGYSILEEFEKAIYK-VGCIIENAEAYSYLTAFENLRQFSRYYNNIDDTKIEEVLDM  119
            ++ILG  + E    +I K +G +IE++  Y+ LT++EN+    R  + +   +++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKI  119

Query  120  VGLLKYKDEKPEKFSLGMKQRLGIASSILCDPEIVILDEPLNGLDVEGMIDVRNIIKNLA  179
            V L + K+ K  ++SLGMKQRLGIA +I+  P ++ILDEP NGLD  G+ ++R++IK+L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  ENKNTTFFISSHLIHDIELTCTHIGVLYNGNLINVDTTKNI  220
            E+   T +ISSHL+ +I+   T IG++ +G+L+  D+ K++
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

508) CKR_0026 in NC_011837


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 90/221 (41%), Positives = 154/221 (70%), Gaps = 2/221 (0%)

Query  1    MEKVIELINLSKVYKNGRGIQNVDLDIYRGQIFGFLGPNGAGKTTAMKIMTGLVKPDRGD  60
            ME +I    LSK Y++   ++++DL + +G ++GFLGPNGAGK+T++K++ GL KP +G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VKILGYSILEEFEKAIYK-VGCIIENAEAYSYLTAFENLRQFSRYYNNIDDTKIEEVLDM  119
            ++ILG  + E    +I K +G +IE++  Y+ LT++EN+    R  + +   +++E L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKI  119

Query  120  VGLLKYKDEKPEKFSLGMKQRLGIASSILCDPEIVILDEPLNGLDVEGMIDVRNIIKNLA  179
            V L + K+ K  ++SLGMKQRLGIA +I+  P ++ILDEP NGLD  G+ ++R++IK+L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  ENKNTTFFISSHLIHDIELTCTHIGVLYNGNLINVDTTKNI  220
            E+   T +ISSHL+ +I+   T IG++ +G+L+  D+ K++
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

509) Clole_2639 in NC_015275


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (524),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 104/227 (46%), Positives = 158/227 (70%), Gaps = 2/227 (0%)

Query  3    IITTNDLCKRIGDKQIIDHVSIHVKQGEIYGFLGPNGAGKTTLMRMLLHLVKADSGSIQL  62
            II T+ L K       + ++ ++V QG +YGFLGPNGAGK+T ++MLL L K+  G+I++
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   FGEEISEMQP-RLLRRIGNMIEYPIFYNHLTVKENLELQCSYMEIEAEESVANALKLVRL  121
            +G E++E +   +L+ IG++IE P +Y HLT  EN+ +    +++ +  +V +ALK+VRL
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-PKKNVNEALKIVRL  122

Query  122  QGMANEKVSQFSAGMRQRLGIARALVHRPELLILDEPVNGLDPIGIKDIRELLKFLCREQ  181
            +   N KVSQ+S GM+QRLGIA A++  P LLILDEP NGLDP GI +IREL+K L    
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  182  GitilisshilseieliADTIGCIKGGQLLEEVALADIKANEQTSLE  228
            G+T+LISSH+LSEI+ IA +IG I+ G+L+ + ++ ++    Q+ + 
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIA  229

510) INV104_09160 in NC_017591


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  142 bits (524),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 95/212 (45%), Positives = 148/212 (70%), Gaps = 4/212 (1%)

Query  3    IVEIINLTKSFKDIEVIHNTSFYLNKGKVYGFVGPNGAGKTTIIKMILGILKPDSGKITI  62
            I+    L+K ++ I  + +  + + +G VYGF+GPNGAGK+T +KM+LG+ KP  G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   FNQTVEQNSK-NILSRIG-LVLGPSFYGHLDAYKNLKLIANMKGLSLDTERLNEYLSMVG  120
            + + ++++++ +IL  IG L+ +PS+YGHL +  N+ ++  +  L L    +NE L +V 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRL--LDLPKKNVNEALKIVR  121

Query  121  LkdvkkkkvkNFSMGMKQRLSIAASLLGSPEILIWDEPINGLDPQGVIEIRSLIRFLQEK  180
            L + K+KKV ++S+GMKQRL+IA +++  P +LI DEP NGLDP G+ EIR LI+ L EK
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  181  KGITFLISSHILSELDKVISDIIIINYGKVEF  212
             G+T LISSH+LSE+D++ + I IIN G + F
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVF  213

511) SPN23F_09830 in NC_011900


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 95/212 (45%), Positives = 147/212 (70%), Gaps = 4/212 (1%)

Query  3    IVEIINLTKSFKDIEVIHNTSFYLNKGKVYGFVGPNGAGKTTIIKMILGILKPDSGKITI  62
            I+    L+K ++ I  + +  + + +G VYGF+GPNGAGK+T +KM+LG+ KP  G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   FNQTVEQNSE-NILSRIG-LVLGPSFYGHLDAYKNLKLIANMKGLSLDTERLNEYLSMVG  120
            + + +++++  +IL  IG L+ +PS+YGHL +  N+ ++  +  L L    +NE L +V 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRL--LDLPKKNVNEALKIVR  121

Query  121  LkdvkkkkvkNFSMGMKQRLSIAASLLGSPEILIWDEPINGLDPQGVIEIRSLIRFLQEK  180
            L + K+KKV ++S+GMKQRL+IA +++  P +LI DEP NGLDP G+ EIR LI+ L EK
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  181  KGITFLISSHILSELDKVISDIIIINYGKVEF  212
             G+T LISSH+LSE+D++ + I IIN G + F
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVF  213

512) SPJ_1000 in NC_012466


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 95/212 (45%), Positives = 147/212 (70%), Gaps = 4/212 (1%)

Query  3    IVEIINLTKSFKDIEVIHNTSFYLNKGKVYGFVGPNGAGKTTIIKMILGILKPDSGKITI  62
            I+    L+K ++ I  + +  + + +G VYGF+GPNGAGK+T +KM+LG+ KP  G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   FNQTVEQNSE-NILSRIG-LVLGPSFYGHLDAYKNLKLIANMKGLSLDTERLNEYLSMVG  120
            + + +++++  +IL  IG L+ +PS+YGHL +  N+ ++  +  L L    +NE L +V 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRL--LDLPKKNVNEALKIVR  121

Query  121  LkdvkkkkvkNFSMGMKQRLSIAASLLGSPEILIWDEPINGLDPQGVIEIRSLIRFLQEK  180
            L + K+KKV ++S+GMKQRL+IA +++  P +LI DEP NGLDP G+ EIR LI+ L EK
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  181  KGITFLISSHILSELDKVISDIIIINYGKVEF  212
             G+T LISSH+LSE+D++ + I IIN G + F
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVF  213

513) bcrA in NC_018594


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 95/212 (45%), Positives = 147/212 (70%), Gaps = 4/212 (1%)

Query  3    IVEIINLTKSFKDIEVIHNTSFYLNKGKVYGFVGPNGAGKTTIIKMILGILKPDSGKITI  62
            I+    L+K ++ I  + +  + + +G VYGF+GPNGAGK+T +KM+LG+ KP  G+I I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   FNQTVEQNSE-NILSRIG-LVLGPSFYGHLDAYKNLKLIANMKGLSLDTERLNEYLSMVG  120
            + + +++++  +IL  IG L+ +PS+YGHL +  N+ ++  +  L L    +NE L +V 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRL--LDLPKKNVNEALKIVR  121

Query  121  LkdvkkkkvkNFSMGMKQRLSIAASLLGSPEILIWDEPINGLDPQGVIEIRSLIRFLQEK  180
            L + K+KKV ++S+GMKQRL+IA +++  P +LI DEP NGLDP G+ EIR LI+ L EK
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  181  KGITFLISSHILSELDKVISDIIIINYGKVEF  212
             G+T LISSH+LSE+D++ + I IIN G + F
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVF  213

514) Calla_1119 in NC_015949


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  141 bits (519),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 94/228 (42%), Positives = 156/228 (69%), Gaps = 8/228 (3%)

Query  1    MISLLKVINLHKSFGKVKALKGISFEVKTATVHGFLGPNGAGKTTTMKILSGLISFDEGI  60
            M  +++   L K + K+  +K+I + V  ++V GFLGPNGAGK+TT+K+L GL    +G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   I--LFDNLNFKTNKKDIVKQIGFLPQNPVFYGYLTPVEYLSLIGQICNFESRTIKKRTEE  118
            I  L  +LN   N+  I+K+IG L ++P +YG LT +E ++++ ++ ++     KK  +E
Sbjct  61   INILGKELN-EKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP----KKNVNE  115

Query  119  VLEIVKLSNVSKRKISTFSGGMLQRLGIAVAIFNKPKLLLLDEPTASLDPEGRAEVLEHI  178
             L IV+L N  ++K+S +S GM QRLGIA+AI + PKLL+LDEPT +LDP G  E+ E I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  179  RSLKEE-GITVFFSTHILNDVERICDHVTILHEGKVIVSDSLENLQKR  225
            +SL E  G+TV++S+H+L+++++I   + I+++G ++  DS+ +L++R
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

515) Calow_1448 in NC_014657


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  141 bits (518),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 158/228 (70%), Gaps = 8/228 (3%)

Query  1    MISLLKVINLHKSFGNVKALKGISFEVKPSTVHGFLGPNGAGKTTTMKILSGLISFDKGT  60
            M  +++   L K + ++  +K+I + V  ++V GFLGPNGAGK+TT+K+L GL    +G 
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   I--LFENLNFKTSKSEIVRQIGYLPQNPAFYGYLTPVEYLSLIGQICNFDTRNIKKRTEE  118
            I  L  +LN   ++  I+++IG L ++P++YG LT +E ++++ ++ ++  +N+    +E
Sbjct  61   INILGKELN-EKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNV----NE  115

Query  119  VLEIVKLTNVSKRKISTFSGGMLQRLGIAVAIFNKPKLLLLDEPTSSLDPEGRAEVLEHI  178
             L IV+L N  ++K+S +S GM QRLGIA+AI + PKLL+LDEPT++LDP G  E+ E I
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  179  KSLQEE-GITVFFSTHILSDVERICDHITILHKGKVIVSDSLENLQKQ  225
            KSL E  G+TV++S+H+LS++++I   I I++ G ++  DS+ +L+++
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

516) GQS_09975 in NC_015865


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  141 bits (519),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 163/252 (65%), Gaps = 12/252 (4%)

Query  3    LIRTENLTKFFGKRNIVYNLDLKVPKGVVYGFLGPNGAGKTTTIKMLTGALRPTYGEIEI  62
            +IRT+ L+K + K   V ++DL+VP+G VYGFLGPNGAGK+TT+KML G  +PT G+I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   FGMNMP-RERVEIMKRVGYMPESPIAYENMTIFEFLTYMGRLSGMKKDEARERAKGLMAY  121
            +G ++  ++R+ I+K +G + ESP  Y ++T +E +T M RL ++ K +  E  K     
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALK-----  118

Query  122  VGVGRIALNRMKELSS---GQKQRVMFAMALMPDPELLILDEPTANLDPLGRIEFIGRIV  178
              + R+  ++ K +S    G KQR+ +AMA+M  P LLILDEPT  LDP G  E+   I 
Sbjct  119  --IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  179  ELSKK-GKTIFVSSHIVSEIEKMCNYVGIINQGRMIAQGKISDLTQIEENEYDVVTSDND  237
             L+ K G T+++SSH++SEI+++   +GIIN+G ++ Q+ I +L +  +++  + T +  
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVV  236

Query  238  RAMEFLREKPYI  249
             A  +L  K Y+
Sbjct  237  SAQKLLNTKGYM  248

517) srtF in NC_015760


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  140 bits (515),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 153/220 (70%), Gaps = 8/220 (3%)

Query  1    MQITVKQLSKSYKDKTILDNITFTIESGTVSGLLGVNGAGKSTLMKILFGLVQKSSGEIR  60
            M I  ++LSK Y+    + +I + +  G+V G+LG NGAGKST +K+L+GL + + G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDG---SSKNK----HSLGALIEAPAIYHNLSAFDNLKTKALLYDIPDSKIFETLEIIGL  113
            + G   + KN+      +G+LIE+P+ Y +L++++N+     L D+P  ++ E+L I+ L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  114  SNTGKKKAGKFSLGMKQRLGIGMAILTDPQFLILDEPTNGLDPDGINELLDLIRSLKAK-  172
             N  +KK +++SLGMKQRLGI+MAI+  P++LILDEPTNGLDP GI+E+ +LI+SL  K 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  173  GMTILVSSHQLLEISKVADHILILDKGKIQYYGENKNVDS  212
            GMT+L+SSH L EI ++A  I I++ G + + +  K++++
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

518) nisF in NC_020450


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  140 bits (516),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 90/214 (43%), Positives = 151/214 (71%), Gaps = 8/214 (3%)

Query  1    MQVKIQNLSKTYKEKQVLQDISFDIKSGTVCGLLGVNGAGKSTLMKILFGLISADTGKIF  60
            M ++ Q LSK Y+    ++DI + +  G+V G+LG NGAGKST +K+L+GL  +  G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDGQEKTNN-------QLGALIEAPAIYMNLSAFDNLKTKALLFGISDKRIHETLEVIGL  113
            + G+E  ++       ++G+LIE+P+ Y +L++++N+     L++++ K ++E+L ++ L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  114  AETGKKRAGKFSLGMKQRLGIGMAILTEPQFLILDEPTNGLDPDGIAELLNLILKLKAK-  172
             +  +K+ +++SLGMKQRLGI+MAI+  P++LILDEPTNGLDP GI E+ +LI  L  K 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  173  GVTILISSHQLHEISKVASQIIILNKGKIRYNHA  206
            G+T+LISSH L EI ++A+ I I+N G + ++++
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDS  216

519) nisF in NC_017486


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  140 bits (513),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 90/212 (43%), Positives = 149/212 (71%), Gaps = 8/212 (3%)

Query  1    MQVKIQNLSKTYKEKQVLQDISFDIKSGTVCGLLGVNGAGKSTLMKILFGLISADTGKIF  60
            M ++ Q LSK Y+    ++DI + +  G+V G+LG NGAGKST +K+L+GL  +  G+I 
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   FDGQEKTNN-------QLGALIEAPAIYMNLSAFDNLKTKALLFGISDKRIHETLEVIGL  113
            + G+E  ++       ++G+LIE+P+ Y +L++++N+     L++++ K ++E+L ++ L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  114  AETGKKRAGKFSLGMKQRLGIGMAILTEPQFLILDEPTNGLDPDGIAELLNLILKLKAK-  172
             +  +K+ +++SLGMKQRLGI+MAI+  P++LILDEPTNGLDP GI E+ +LI  L  K 
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  173  GVTILISSHQLHEISKVASQIIILNKGKIRYN  204
            G+T+LISSH L EI ++A+ I I+N G + ++
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQ  214

520) CLM_1400 in NC_012563


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 95/221 (43%), Positives = 151/221 (69%), Gaps = 2/221 (0%)

Query  7    IEIHDLTKEIDGKAILSGITMNVKKGEIYGFLGANGAGKTTLMKTIYGILKPTSGSICIL  66
            I  + L+KE +    + +I + V +G +YGFLG+NGAGK+T +K + G+ KPT G+I IL
Sbjct  5    IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINIL  64

Query  67   GNELKENN-CAVFRKMGSLIEIPVFYHSFSAYKNLELHCDYMGAQYIQNIEKVLDMAGVR  125
            G+EL+E+N  ++++ +GSLIE P +Y  +++  N+ +    ++    +N++  L +  + 
Sbjct  65   GKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKIVRLE  123

Query  126  NQGDKPVKEFSLGMKQRLALARAILTNPELLILDEPINGLDPQGIIEIRELLLQINRENR  185
            NQ +K V ++SLGMKQRL++A AI+  P LLILDEP NGLDP GI EIREL+  +     
Sbjct  124  NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYG  183

Query  186  TTILISSHILSEMAKIADRIGVIDKGIILEEISMTEIVDKG  226
             T+LISSH+LSE+ +IA  IG+I+ G ++ + S+ E+ ++G
Sbjct  184  MTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRG  224

521) KE3_1033 in NC_021900


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 150/216 (70%), Gaps = 10/216 (4%)

Query  6    KHIKKVFKDKEVLNDISFTIESGSICGLLGVNGAGKSTLMRILYGLESQSAGEILFDGKT  65
            K+ +K+F+ K    DI + +  G++ G+LG NGAGKST +++L GL   + G+I + GK 
Sbjct  12   KEYNKIFRVK----DIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK-  66

Query  66   SIEIKDD----KKFGALIESPAIYMNLSAFDNLKTKALLYDIPDETIRETLNLIGLANTG  121
             ++ K+     K +G+LIESP+ Y +L++++N+     L D+P   + E+L+++ L N  
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQK  126

Query  122  RKKAGKFSLGMKQRLGLGMAIITNPEFLTLDEPTNGLDPDGIKELLDLINSLKQK-GITI  180
             KK +++SLGMKQRLG++MAI+  P +L LDEPTNGLDP GI E+ +LI+SL +K G+T+
Sbjct  127  NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTV  186

Query  181  LISSHQLHEVSKIADDIVILHQGKIHYNQPNQDKQD  216
            LISSH L E+ +IA  I I+++G + ++++ ++ ++
Sbjct  187  LISSHLLSEIDQIATSIGIINHGELVFQDSIKELHN  222

522) CD630_10970 in NC_009089


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 127/299 (43%), Positives = 205/299 (69%), Gaps = 14/299 (4%)

Query  6    IIETKNLTKQYGSQKSVADLNIHVQKGRIYGLLGRNGAgktttmkmllgltkPTSGEVKI  65
            II T+ L+K+Y     V D++++V +G +YG+LG NGAGK+TT+KMLLGL+KPT G+++I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   WGKSLQGNEK-KLLPRIGSLIESPGFYPNLTATENLQIFATLRGIPNRHSIKNTLDLVGL  124
             GK L+ +++  +L  IGSLIESP++Y +LT+ EN+ I   L ++P+++ ++++L +V L
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRL  122

Query  125  PYKDKKLFSQYSLGMKQRLAIALAVMHDPELLILDEPINGLDPIGIAEVRSFIRELCDTK  184
              + +K  SQYSLGMKQRL+IA+A+M  P LLILDEP NGLDP GI E+R +I+ L +  
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  185  GKTilisshilseisllADDIGIIDHGTlleeeslaeleQKSSKHIRFTLSDTAQAARIL  244
            G T+LISSH+LSEI  +A  IGII+HG L+ ++S+ EL++++  +I +   +   A ++L
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL  242

Query  245  ERT-----FHESHFSIQddhnlrlhnldlSVGKIVTAFVENGLEVSEAHTCEESLEDYF  298
            +       ++++ ++I+       +  D  V+KI   +V++ ++V   +    SLED F
Sbjct  243  NTKGYMSLIQDGYLTIE-------NLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

523) RHOM_13575 in NC_015977


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 128/299 (43%), Positives = 204/299 (69%), Gaps = 14/299 (4%)

Query  6    IIETKNLTKQYGSQKSVADLNIHVKRGRIYGLLGRNGAgktttmkmllgltEPTSGEVKI  65
            II T+ L+K+Y     V D++++V +G +YG+LG NGAGK+TT+KMLLGL+ PT G+++I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   WGKSLQGNEK-KLLPRIGSLIESPGFYPNLTGTENLRIFATLRGVPNNHAIKDALDLVGL  124
             GK L+ +++  +L  IGSLIESP++Y +LTG EN+ I   L ++P+++ +++AL +V L
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRL  122

Query  125  PYKDKKLFSQYSLGMKQRLAIALAVMHDPELLILDEPINGLDPIGIAEVRSFIRELCDAR  184
              + +K  SQYSLGMKQRL+IA+A+M  P LLILDEP NGLDP GI E+R +I+ L +  
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  185  GKTilisshilseisllADDIGIIDHGalleeeslaeleQKSSKHIRFTLSDTAQAARIL  244
            G T+LISSH+LSEI  +A  IGII+HG L+ ++S+ EL++++  +I +   +   A ++L
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL  242

Query  245  ERN-----FHENHFSIQddhnlrlhnldlPVGKIVTAFVENGLEVSEAHTCEESLEDYF  298
            + +     +++  ++I+       +  D  V+KI   +V++ ++V   +    SLED F
Sbjct  243  NTKGYMSLIQDGYLTIE-------NLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

524) alr0970 in NC_003272


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  139 bits (511),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 95/237 (41%), Positives = 165/237 (70%), Gaps = 7/237 (2%)

Query  4    ELAIRTRGLTKQFERHIAVNDVDLEIQMGEVYGLIGPNGAGKTTLIRMLAAAEEPTTGEI  63
            E+ IRT+ L+K++++ + V+D+DL +  G VYG++GPNGAGK+T ++ML +   PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   YINGEHLRLDKSNPTLKRHLGYLPDDYPLYEDLTVWDYLDYFARLYRLREPRRTQRLHEV  123
             I G +L  +K+  ++ +++G L +  + Y +LT  + +    RL  L  P++   ++E 
Sbjct  62   NILGKELN-EKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL--PKKN--VNEA  116

Query  124  LELIQLENKRKSQISTLSRGMKQRLSLARTIIHEPILLLLDEPVSGLDPIARMQFRQIIK  183
            L +++LEN+++ ++S  S GMKQRL++A +I+  P LL+LDEP +GLDP +  ++R++IK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  184  ALQEA-GMTIVISSHVLSDLAELCTSVGIMELGFLVESASLQALYQRLSQQQIMLST  239
            +L E  GMT++ISSH+LS++ ++ TS+GI++ G LV   S++ L +R +Q QI + T
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR-GQSQIAIKT  232

525) RHOM_10505 in NC_015977


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 129/299 (44%), Positives = 205/299 (69%), Gaps = 14/299 (4%)

Query  6    IIETKNLTKQYGSQKSVADLNIHVKRGRIYGLLGRNGAgktttmkmllgltkPTSGEVKI  65
            II T+ L+K+Y     V D++++V +G +YG+LG NGAGK+TT+KMLLGL+KPT G+++I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   WGKSLQGNEK-KLLPRIGSLIESPGFYPNLTGTENLRIFATLRGVPNNHAIKDALDLVGL  124
             GK L+ +++  +L  IGSLIESP++Y +LTG EN+ I   L ++P+++ +++AL +V L
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRL  122

Query  125  PYKDKKLFSQYSLGMKQRLAIALAVMHDPELLILDEPINGLDPIGIAEVRSFIRELCDAR  184
              + +K  SQYSLGMKQRL+IA+A+M  P LLILDEP NGLDP GI E+R +I+ L +  
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  185  GKTilisshilseisllADDIGIIDHGalleeeslaeleQKSSKHIRFTLSDTAQAARIL  244
            G T+LISSH+LSEI  +A  IGII+HG L+ ++S+ EL++++  +I +   +   A ++L
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL  242

Query  245  ERN-----FHENHFSIQddhnlrlhnldlPVGKIVTAFVENGLEVSEAHTCEESLEDYF  298
            + +     +++  ++I+       +  D  V+KI   +V++ ++V   +    SLED F
Sbjct  243  NTKGYMSLIQDGYLTIE-------NLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

526) CK5_04950 in NC_021022


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 129/299 (44%), Positives = 205/299 (69%), Gaps = 14/299 (4%)

Query  6    IIETKNLTKQYGSQKSVADLNIHVKRGRIYGLLGRNGAgktttmkmllgltkPTSGEVKI  65
            II T+ L+K+Y     V D++++V +G +YG+LG NGAGK+TT+KMLLGL+KPT G+++I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  66   WGKSLQGNEK-KLLPRIGSLIESPGFYPNLTGTENLRIFATLRGVPNNHAIKDALDLVGL  124
             GK L+ +++  +L  IGSLIESP++Y +LTG EN+ I   L ++P+++ +++AL +V L
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRL  122

Query  125  PYKDKKLFSQYSLGMKQRLAIALAVMHDPELLILDEPINGLDPIGIAEVRSFIRELCDAR  184
              + +K  SQYSLGMKQRL+IA+A+M  P LLILDEP NGLDP GI E+R +I+ L +  
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  185  GKTilisshilseisllADDIGIIDHGalleeeslaeleQKSSKHIRFTLSDTAQAARIL  244
            G T+LISSH+LSEI  +A  IGII+HG L+ ++S+ EL++++  +I +   +   A ++L
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL  242

Query  245  ERN-----FHENHFSIQddhnlrlhnldlPVGKIVTAFVENGLEVSEAHTCEESLEDYF  298
            + +     +++  ++I+       +  D  V+KI   +V++ ++V   +    SLED F
Sbjct  243  NTKGYMSLIQDGYLTIE-------NLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

527) Csac_2246 in NC_009437


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 156/225 (70%), Gaps = 8/225 (3%)

Query  1    MLKVINLHKSFGKVKALKGISFEVKPATVHGFLGPNGAGKTTTMKILSGLISFDEGII--  58
            +++   L K + K+  +K+I + V  ++V GFLGPNGAGK+TT+K+L GL    +G I  
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  59   LFENLDYKTNKNVIVKQIGYLPQNPVFYGYLTPVEYLSLIGQICNFESRSIKKRTEEVLE  118
            L  +L+ K N+  I+K+IG L ++P +YG LT +E ++++ ++ ++     KK  +E L 
Sbjct  64   LGKELNEK-NRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP----KKNVNEALK  118

Query  119  IVKLSSVSKRKISTFSGGMLQRLGIAVAIFNKPKLLLLDEPTASLDPEGRAEVLEHIRSL  178
            IV+L +  ++K+S +S GM QRLGIA+AI + PKLL+LDEPT +LDP G  E+ E I+SL
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  179  KEE-GITVFFSTHILNDVERICDYVTILHEGKIIVSDSLENLQKQ  222
             E  G+TV++S+H+L+++++I   + I+++G ++  DS+ +L+++
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

528) CcmA9 in NC_003869


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  138 bits (506),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 92/223 (42%), Positives = 154/223 (70%), Gaps = 5/223 (2%)

Query  3    DVVIELKGLTKIYGTQPAVDHLDLEIKRGEVFGLLGPNGAGKTTTILMILGLVEPTEGEV  62
            +++I  + L+K Y     V ++DL + +G V+G+LGPNGAGK+TT+ M+LGL  PT+G++
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  63   KVLGIN-STREPLKVKKWVGYLPEDVGFYEDMTGLENLKLTAALNGMeekeavkaaeell  121
            ++LG + + ++ + + K +G L E  ++Y ++TGLEN+ +   L ++  K+   A   + 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVR  121

Query  122  ekvGLGEAKDKKVGAYSRGMRQRLGLADALIKKPQIVILDEPTLGLDPEGMKEFLELIKN  181
                L + K+KKV+ YS GM+QRLG+A A++K P+++ILDEPT GLDP G+ E+ ELIK+
Sbjct  122  ----LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS  177

Query  182  LSREGGMTVLLSSHHLHQVQEICDRVGIFVKGKLIAKGTVSEL  224
            L+   GMTVL+SSH L ++++I   +GI+  G L+ ++++ EL
Sbjct  178  LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

529) Cthe_3066 in NC_009012


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (504),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 92/216 (43%), Positives = 144/216 (67%), Gaps = 8/216 (3%)

Query  1    METVLEIKGLTKLYKNGRGIF---DINLEVYRGDVFGFLGPNGAGKTTAMKIMTGLMHPN  57
            ME ++  + L+K Y++   IF   DI+L V +G V+GFLGPNGAGK+T++K++ GL  P 
Sbjct  1    MEMIIRTQRLSKEYNK---IFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPT  57

Query  58   SGDVKIFGHSVITEFEQA-MKKVGCIIETAESYAYLTPYENLKLFARFYDDVDDKRIDEV  116
             G+++I+G  +      + +K +G +IE++  Y+ LT  EN+ +  R+ D +  K ++E 
Sbjct  58   QGNINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEA  116

Query  117  LELTGILKFKKEKVKNFSLGMKQRLGLAAAILSRPELVILDEPLNGLDVEGMIEIRKLIK  176
            L +  + + K+ KV ++SLGMKQRLG+A AI+  P L+ILDEP NGLD  G+ EIR LIK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  177  ALAENEKTTFFISSHLIHDVEITCNRIGILYDGKLV  212
            +L+E+   T +ISSHL+ +++     IGI+ +G LV
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELV  212

530) Clo1313_0616 in NC_017304


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (504),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 92/216 (43%), Positives = 144/216 (67%), Gaps = 8/216 (3%)

Query  1    METVLEIKGLTKLYKNGRGIF---DINLEVYRGDVFGFLGPNGAGKTTAMKIMTGLMHPN  57
            ME ++  + L+K Y++   IF   DI+L V +G V+GFLGPNGAGK+T++K++ GL  P 
Sbjct  1    MEMIIRTQRLSKEYNK---IFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPT  57

Query  58   SGDVKIFGHSVITEFEQA-MKKVGCIIETAESYAYLTPYENLKLFARFYDDVDDKRIDEV  116
             G+++I+G  +      + +K +G +IE++  Y+ LT  EN+ +  R+ D +  K ++E 
Sbjct  58   QGNINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEA  116

Query  117  LELTGILKFKKEKVKNFSLGMKQRLGLAAAILSRPELVILDEPLNGLDVEGMIEIRKLIK  176
            L +  + + K+ KV ++SLGMKQRLG+A AI+  P L+ILDEP NGLD  G+ EIR LIK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  177  ALAENEKTTFFISSHLIHDVEITCNRIGILYDGKLV  212
            +L+E+   T +ISSHL+ +++     IGI+ +G LV
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELV  212

531) CLD_3324 in NC_010516


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 94/224 (42%), Positives = 152/224 (68%), Gaps = 2/224 (0%)

Query  4    EYVIEIHDLTKEIDGKAILSGITMNVKRGEIYGFLGANGAGKTTLMKTIYGILKPTSGSI  63
            E +I  + L+KE +    + +I + V +G +YGFLG+NGAGK+T +K + G+ KPT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   CIFENELKENN-CAVFSKMGSLIEIPVFYHNFSAYKNLELHCGYMGEQYIQNIEKVLDMT  122
             I+ +EL+E+N  +++  +GSLIE P +Y ++++  N+ +    ++    +N++  L + 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKIV  120

Query  123  GIRNQGDKPVKEFSLGMKQRLALARAILTNPELLILDEPINGLDPQGIIEIRELLLQINR  182
             + NQ +K V ++SLGMKQRL++A AI+  P LLILDEP NGLDP GI EIREL+  +  
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  183  ENGTTILISSHILSEMAKTADRIGVIDKGIILKEISMTEIVDKG  226
              G T+LISSH+LSE+ + A  IG+I+ G ++ + S+ E+ ++G
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRG  224

532) Awo_c27310 in NC_016894


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (503),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/222 (43%), Positives = 158/222 (72%), Gaps = 3/222 (1%)

Query  7    MLRTENLSKKYDDFTAVDQLNLEVKESAIFGFLGHNGAGKtttismlttlilptQGKASI  66
            ++RT+ LSK Y+ +  V +++L V ++A++GFLG NGAGK+TT+ ML  L  PTQG+ +I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  67   GGLDIV-KDNLKVRKMLGYLPENVSLYGDLTAVENLRFFGKLSRVEKVDAAIEEVLKLLG  125
             G ++  K+ + + K +G L E+ S YG+LT++EN+ +  +L  + K    ++E LK++ 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK--KNVNEALKIVR  121

Query  126  MTAWQNRKVKTYSKGMKQRIGIAQAILHKPKILFLDEPTSGLDPQGAKDMRDILLMLNAK  185
            +   +N+KV  YS GMKQR+GIA AI+  PK+L+LDEPT+GLDP G  ++R+++  L  K
Sbjct  122  LENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEK  181

Query  186  WGTTIFMNTHLLSEVTKLCTDIGIISHGKLLMADSLINIEKK  227
             G T+++++HLLSE+ ++ T IGII+HG L+  DS+ +++++
Sbjct  182  YGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

533) CLI_1328 in NC_009699


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (503),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 94/224 (42%), Positives = 153/224 (69%), Gaps = 2/224 (0%)

Query  4    EYVIEIHDLTKEIDGKAILSGITMNVKRGEIYGFLGANGAGKTTLMKTIYGILKPTSGSI  63
            E +I  + L+KE +    + +I + V +G +YGFLG+NGAGK+T +K + G+ KPT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   CIFENELKENN-CAVFRKMGSLIEIPVFYHNFSAYKNLELHCGYMGEQYIQNIEKVLDMT  122
             I+ +EL+E+N  ++++ +GSLIE P +Y ++++  N+ +    ++    +N++  L + 
Sbjct  62   NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP-KKNVNEALKIV  120

Query  123  GIRNQGDKPVKEFSLGMKQRLALARAILTNPELLILDEPINGLDPQGIIEIRELLLQINR  182
             + NQ +K V ++SLGMKQRL++A AI+  P LLILDEP NGLDP GI EIREL+  +  
Sbjct  121  RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE  180

Query  183  ENRTTILISSHILSEMAKIADRIGVIDKGIILKEISMTEIVDKG  226
                T+LISSH+LSE+ +IA  IG+I+ G ++ + S+ E+ ++G
Sbjct  181  KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRG  224

534) PFC_00460 in NC_018092


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 161/252 (64%), Gaps = 6/252 (2%)

Query  1    MEYVIETKDLTKFFGKRNIVYHLNLKVPKGVVYGFLGPNGAGKTTTIKMLTGALRPTYGE  60
            ME +I T+ L+K + K   V +++L+VP+G VYGFLGPNGAGK+TT+KML G  +PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IKIFGLDMPQK-RVDIMKKVGYMPEVPIAYEDMTIFEFLIYMGRLSGLKKEEAREQAKML  119
            I+I+G ++ +K R+ I+K +G + E P  Y ++T +E +  M RL +L K +  E     
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEA----  116

Query  120  MKYVGVGRVALNKIKELSSGQKQRVSFASALIGNPELLILDEPTANLDPLGRIEFIGKII  179
            +K V +     +K+ + S G KQR+++A A++  P LLILDEPT  LDP G  E+   I 
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  180  SLAKE-GKTIFVSSHIVSEVEKMCNYVGLINQGRLIAQGKISELTRIEEDEYDISTSDNK  238
            SL+   G T+++SSH++SE++++   +G+IN+G L+ Q+ I EL    + +  I T +  
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVV  236

Query  239  AAIEYLKEKPYV  250
            +A   L+ K Y+
Sbjct  237  SAQKLLNTKGYM  248

535) PF0279 in NC_003413


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 161/252 (64%), Gaps = 6/252 (2%)

Query  1    MEYVIETKDLTKFFGKRNIVYHLNLKVPKGVVYGFLGPNGAGKTTTIKMLTGALRPTYGE  60
            ME +I T+ L+K + K   V +++L+VP+G VYGFLGPNGAGK+TT+KML G  +PT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IKIFGLDMPQK-RVDIMKKVGYMPEVPIAYEDMTIFEFLIYMGRLSGLKKEEAREQAKML  119
            I+I+G ++ +K R+ I+K +G + E P  Y ++T +E +  M RL +L K +  E     
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEA----  116

Query  120  MKYVGVGRVALNKIKELSSGQKQRVSFASALIGNPELLILDEPTANLDPLGRIEFIGKII  179
            +K V +     +K+ + S G KQR+++A A++  P LLILDEPT  LDP G  E+   I 
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  180  SLAKE-GKTIFVSSHIVSEVEKMCNYVGLINQGRLIAQGKISELTRIEEDEYDISTSDNK  238
            SL+   G T+++SSH++SE++++   +G+IN+G L+ Q+ I EL    + +  I T +  
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVV  236

Query  239  AAIEYLKEKPYV  250
            +A   L+ K Y+
Sbjct  237  SAQKLLNTKGYM  248

536) AciM339_0254 in NC_019942


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (504),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 90/221 (41%), Positives = 156/221 (71%), Gaps = 2/221 (0%)

Query  1    MYLEAINLTKKYGNFYALKNLNLRVEGGKCIGYLGPNGAGktttlklftnllRPTSGETI  60
            M + +  L+K Y +++ +K+++LRV  G   G+LGPNGAGK+TTLK++  L +PT G+  
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   IDGYSV-QRNMKKALKDVGTLIETPGFYPYLTPVEILSMICDIRGADKGEIKHTLETVKL  119
            I G  + ++N    LKD+G+LIE+P++Y  LT +E ++++  + +  K +++++L  V+L
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRL  122

Query  120  YRWRNKRVGKFSKGMKQRLAMATALVTNPSILILDEPTTGMDPQGMAEIRNIIKSLKRE-  178
               +NK+V+++S GMKQRL++A A++  P +LILDEPT G+DP G+ EIR++IKSL    
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  179  GKLIFMSSHLLPEVTEVCDEVAMINRGTLRLYDSIDRVTKK  219
            G  +++SSHLL+E+ ++   +++IN+G L + DSI  + ++
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

537) TTC1095 in NC_005835


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (505),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 91/224 (41%), Positives = 157/224 (71%), Gaps = 6/224 (2%)

Query  3    VIQTHGLTKRYGRVVAVEDLNLSVREGEVYGLLGPNGSGKtttillllglteptSGEARV  62
            +I+T+ L+K Y ++  V D++L V +G VYG+LGPNG+GK+TT+ +LLGL+ PT G+  +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   LGFD-PMREPLKVKSRVGYLPDQVGFYGELSAWENLRYTTRLLGLPDKEAEARIEEVLKR  121
            LG +   ++ + +   +G L +  ++YG+L++ EN+    RLL+LP K+    ++E LK 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN----VNEALKI  119

Query  122  MGLWEVRGRKVAAFSRGMRQRLGLAEVLLKRPKVAILDEPTLGLDPEAAREFLDLIKGLK  181
            + L + + +KV+ +S GM+QRLG+A  ++K PK+ ILDEPT GLDP +  E+ +LIK+L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  182  AE-GITVLLSSHLLHQVQEVCDRVGLFHKGRLALEGTVAELAHR  224
               G+TVL+SSHLL +++++   +G+++ G L +++++ EL +R
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

538) CA_C2734 in NC_003030


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 97/231 (42%), Positives = 156/231 (68%), Gaps = 5/231 (2%)

Query  1    MGLVLQTNCLTKKYGKQLAVNKINMKVEKGDIYGLIGKNGAGKTTIMKIACGLIHQSQGD  60
            M ++++T+ L+K Y K + V+ I+++V +G +YG++G NGAGK+T +K+  GL   +QG+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IQLFESSDVEKGR----KRIGCIIEYPALYPYMTARENLIYYDKLLGIVDYSNVDEVLNL  116
            I+++     EK R    K IG +IE P+ Y  +T+ EN+   ++LL++    NV+E L++
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKI  119

Query  117  VGLGDTGKKKTKAFSLGMKQRLSIAISLLGNPDFLILDEPINGLDPYGIKevrelllrln  176
            V L +  +KK   +SLGMKQRL+IA++++  P +LILDEP NGLDP GI E+REL+  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  177  teneITILISSHILGELAKIATKYGIINKGVLIDEFKASELNERCKKCLNV  227
                +T+LISSH+L+E+ +IAT  GIIN G L+ +    EL++R +  + +
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI  230

539) SMB_G2769 in NC_015687


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 97/231 (42%), Positives = 156/231 (68%), Gaps = 5/231 (2%)

Query  1    MGLVLQTNCLTKKYGKQLAVNKINMKVEKGDIYGLIGKNGAGKTTIMKIACGLIHQSQGD  60
            M ++++T+ L+K Y K + V+ I+++V +G +YG++G NGAGK+T +K+  GL   +QG+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IQLFESSDVEKGR----KRIGCIIEYPALYPYMTARENLIYYDKLLGIVDYSNVDEVLNL  116
            I+++     EK R    K IG +IE P+ Y  +T+ EN+   ++LL++    NV+E L++
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKI  119

Query  117  VGLGDTGKKKTKAFSLGMKQRLSIAISLLGNPDFLILDEPINGLDPYGIKevrelllrln  176
            V L +  +KK   +SLGMKQRL+IA++++  P +LILDEP NGLDP GI E+REL+  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  177  teneITILISSHILGELAKIATKYGIINKGVLIDEFKASELNERCKKCLNV  227
                +T+LISSH+L+E+ +IAT  GIIN G L+ +    EL++R +  + +
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI  230

540) CEA_G2743 in NC_017295


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 97/231 (42%), Positives = 156/231 (68%), Gaps = 5/231 (2%)

Query  1    MGLVLQTNCLTKKYGKQLAVNKINMKVEKGDIYGLIGKNGAGKTTIMKIACGLIHQSQGD  60
            M ++++T+ L+K Y K + V+ I+++V +G +YG++G NGAGK+T +K+  GL   +QG+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IQLFESSDVEKGR----KRIGCIIEYPALYPYMTARENLIYYDKLLGIVDYSNVDEVLNL  116
            I+++     EK R    K IG +IE P+ Y  +T+ EN+   ++LL++    NV+E L++
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKI  119

Query  117  VGLGDTGKKKTKAFSLGMKQRLSIAISLLGNPDFLILDEPINGLDPYGIKevrelllrln  176
            V L +  +KK   +SLGMKQRL+IA++++  P +LILDEP NGLDP GI E+REL+  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  177  teneITILISSHILGELAKIATKYGIINKGVLIDEFKASELNERCKKCLNV  227
                +T+LISSH+L+E+ +IAT  GIIN G L+ +    EL++R +  + +
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAI  230

541) Cal7507_5744 in NC_019682


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (504),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 96/237 (41%), Positives = 161/237 (68%), Gaps = 7/237 (2%)

Query  14   ELAISTRGLTKQFDRHVAVNDVDLEIAAGEVYGLIGPNGAGKTTLIRMLAAAEEPTTGEI  73
            E+ I T+ L+K++++   V+D+DL ++ G VYG++GPNGAGK+T ++ML +   PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  74   YINGDRLRRDKSNPTLKRRLGYLPDDYPLYEDLTVWDYLDYFARLYRLREPRRTQRLHEV  133
             I G  L  +K+  ++ + +G L +  + Y +LT  + +    RL  L  P++   ++E 
Sbjct  62   NILGKEL-NEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL--PKKN--VNEA  116

Query  134  LELIQLGNKRNSMISTLSRGMKQRLSLARTIIHEPILLLLDEPVSGLDPIARMQFREIIK  193
            L +++L N++N  +S  S GMKQRL++A +I+  P LL+LDEP +GLDP +  ++RE+IK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  194  ALQEA-GMTILISSHVLSDLAELCTSVGIMELGFLVESTSLKQLYQRLSRQQIVLST  249
            +L E  GMT+LISSH+LS++ ++ TS+GI++ G LV   S+K+L +R ++ QI + T
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR-GQSQIAIKT  232

542) GPOL_c31670 in NC_016906


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 146/221 (67%), Gaps = 4/221 (1%)

Query  1    MISMITVENLSKRYGEYVAVDNVSFACRPGQVTGFLGPNGAGKSTTMRVMTGLTPATSGS  60
            M  +I  + LSK Y     V ++ +    G V GFLGPNGAGKSTT++++ GL+ +T G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VTIDGQAYRDIPNPA--TEVGVLLDASAQHAGRTGEEILRLTAMTIGVPRTRVDEMLELV  118
            + I G+   +    +   ++G L+++++  +  TG E + +    +++P+  V+E L +V
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV  120

Query  119  NLTPQEAGRRVRNYSLGMRQRLGIANALMGDPRVLILDEPANGLDPAGIHWMRSLLRGYA  178
             L  Q   ++V +YSLGM+QRLGIA A+M  P++LILDEP+NGLDPAGI+ +R L+++ +
Sbjct  121  RLENQK-NKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  179  DR-GGTVLLSSHLLHEIEIVADDLVVIGNGRIVAQGTKAEL  218
            ++ G TVL+SSHLL EI+ +A  + +I +G +V Q++  EL
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

543) CDR20291_1750 in NC_013316


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  136 bits (501),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 128/299 (43%), Positives = 203/299 (68%), Gaps = 14/299 (4%)

Query  18   IIETKNLTKQYGSQKSVADLNIHVKRGRIYGLLGRNGAgktttmkmllgltkPTSGEVKI  77
            II T+ L+K+Y     V D++++V +G +YG+LG NGAGK+TT+KMLLGL+KPT G+++I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  78   WGKSLQGNEK-KLLPRIGSLIESPGFYPNLTATENLRIFATLRGVPNSHAIRDALDLVGL  136
             GK L+ +++  +L  IGSLIESP++Y +LT+ EN+ I   L ++P+ + + +AL +V L
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN-VNEALKIVRL  122

Query  137  PYKDKKLFSQYSLGMKQRLAIALAVMHDPELLILDEPINGLDPIGIAEVRSFIRELCDAR  196
              + +K  SQYSLGMKQRL+IA+A+M  P LLILDEP NGLDP GI E+R +I+ L +  
Sbjct  123  ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  197  GKTilisshilseisllADDIGIIDHGalleeeslaeleQKSSKHIRFTLSDTAQAARIL  256
            G T+LISSH+LSEI  +A  IGII+HG L+ ++S+ EL++++  +I +   +   A ++L
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL  242

Query  257  ERN-----FHENHFSIQddhnlrlhnldlPVGKIVTAFVENGLEVSEAHTCEESLEDYF  310
            + +     +++  ++I+       +  D  V+KI   +V++ ++V   +    SLED F
Sbjct  243  NTKGYMSLIQDGYLTIE-------NLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIF  294

544) Noca_1320 in NC_008699


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 90/218 (42%), Positives = 146/218 (67%), Gaps = 4/218 (1%)

Query  1    MITVEGLTRKYGSFTAVDDVSFVCQPGRVTGFLGPNGAGKTTTMRVMVGLTPPTAGRVTI  60
            +I  + L++ Y  +  V D+ +    G V GFLGPNGAGK+TT+++++GL+ PT G + I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  61   GGHLYNDIPNPG--RHVGVLLDASAQHAGRTGREILELGARTMGLPATRIDEMLELVSLT  118
             G   N+    +  +++G L+++++  +  TG E + +  R ++LP   ++E L +V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  119  PAEAKRRLRNYSLGMKQRLGIAHALLGDPSVLILDEPANGLDPAGIRWMRGLLKGYAER-  177
              + ++++ +YSLGMKQRLGIA A++  P +LILDEP+NGLDPAGI  +R L+K+ +E+ 
Sbjct  124  -NQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  178  GGTVLLSSHLLNEVELIADEMILIGHGRIVAQGDKKSL  215
            G TVL+SSHLL+E++ IA  + +I HG +V Q+  K L
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

545) PAB1668 in NC_000868


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 166/253 (66%), Gaps = 14/253 (5%)

Query  5    IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI  64
            II T+ L+K + K   V +++L+VP+GAVYGFLGPNGAGK+TT+KML G  KPT G+I+I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  65   IGMEMP-RERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY  123
            +G E+  ++R+ I++++G + E P  Y+++T +E +  M RLL+LPK K VN+A   +  
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEA---LKI  119

Query  124  TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA  183
              +     +K+ + S G +QR+ +A A+M  P LLILDEPT+ LDP G    I  I EL 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAG----IEEIRELI  175

Query  184  KS-----GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDN  238
            KS     G TV+ISSH++SEI+++   +G+I++G+L+ Q+ +++L +   ++  +   + 
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNV  235

Query  239  EKLLKFLRDKIYV  251
                K+L  K Y+
Sbjct  236  VSAQKLLNTKGYM  248

546) Mpet_0643 in NC_014507


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  135 bits (495),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 146/222 (66%), Gaps = 14/222 (6%)

Query  7    LVKTYNGVNAVDGLSLTINDGEIYGLLGPNGAGKSTTILMLCGLIQPDSGECLINGVEVS  66
            L K YN +  V ++ L + +G +YG+LGPNGAGKSTT+ ML GL +P  G+  I G E++
Sbjct  10   LSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELN  69

Query  67   -KNPIEVKRNIGYMPEDVGFYQNMSAAQNLDFFARLFGITADERGARIDSLLELVGLSGV  125
             KN I + ++IG + E  ++Y ++++ +N+ +  RL+++   +    ++  L +V L   
Sbjct  70   EKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN----VNEALKIVRLENQ  125

Query  126  -EKKVGGFSKGMRQRLGIAKTLINDPDVIILDEPTANLDPQGVADYRRIIRQISES-GKT  183
             +KKV+ +S GM+QRLGIA ++++ P ++ILDEPT  LDP G+ + R +I+ ++E  G T
Sbjct  126  KNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMT  185

Query  184  VLVSSHILSEVSKVCTKIGIMCRGKIVHEGSWDNFTDSINSL  225
            VL+SSH+LSE+ ++ T IGI+ +G +V       F DSI+ L
Sbjct  186  VLISSHLLSEIDQIATSIGIINHGELV-------FQDSIKEL  220

547) Npun_F2805 in NC_010628


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  134 bits (493),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 95/237 (41%), Positives = 160/237 (68%), Gaps = 7/237 (2%)

Query  14   ELAICTRGLTKQFDRHVAVNDVDLEIQAGEVYGLIGPNGAGKTTLIRMLATAEEPTTGEI  73
            E+ I T+ L+K++++   V+D+DL +  G VYG++GPNGAGK+T ++ML     PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  74   YINGDRLLRDKSNPKLKRRLGYLPDDYPLYEDLTVWDYLDYFARLYRLREPRRTQRLHEV  133
             I G + L +K+   + + +G L +  + Y +LT  + +    RL  L  P++   ++E 
Sbjct  62   NILG-KELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL--PKKN--VNEA  116

Query  134  LELIQLGNKRHSQISTLSRGMKQRLSLARTIIHEPILLLLDEPVSGLDPIARMHFREIIK  193
            L +++L N+++ ++S  S GMKQRL++A +I+  P LL+LDEP +GLDP +  ++RE+IK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  194  ALQEA-GMTVIISSHVLSDLAELCTSVGIMELGFLVESTSLQQLYERLSHQQIVIST  249
            +L E  GMTV+ISSH+LS++ ++ TS+GI++ G LV   S+++L +R ++ QI I T
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR-GQSQIAIKT  232

548) Riv7116_0431 in NC_019678


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  133 bits (487),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 94/231 (41%), Positives = 155/231 (68%), Gaps = 6/231 (2%)

Query  4    ELAIRTSGLYKQFDKHIAVNNLELEIGEGEVYGLIGPNGAGKTSLIRMLAAAEEPTAGEI  63
            E+ IRT  L K+++K + V++++L + +G VYG++GPNGAGK++ ++ML +   PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   YLNGDRLRRDKTNPTLKRRLGYLPDDYPLYKELTVWDYLDYFARLYLLKEPKRTKRLHEV  123
             + G  L  +K   ++ + +G L +  + Y +LT  + +    R  LL  PK  K ++E 
Sbjct  62   NILGKEL-NEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQR--LLDLPK--KNVNEA  116

Query  124  LQLIQLENKRNSLISTLSRGMKQRLCLARTIIHEPIILLLDEPVSGLDPIARMQFREIIK  183
            L++++LEN++N  +S  S GMKQRL +A +I+  P +L+LDEP +GLDP +  ++RE+IK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  184  VLQEA-GMTILISSHVLSDLAELCTSVGIMELGFLVESASLSELYQRCATQ  233
             L E  GMT+LISSH+LS++ ++ TS+GI++ G LV   S+ EL +R  +Q
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQ  227

549) Riv7116_0434 in NC_019678


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  133 bits (488),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 94/231 (41%), Positives = 156/231 (68%), Gaps = 6/231 (2%)

Query  4    ELAIRTSGLYKQFDKHIAVNNLELEIGEGEVYGLIGPNGAGKTSLIRMLAAAEEPTAGEI  63
            E+ IRT  L K+++K + V++++L + +G VYG++GPNGAGK++ ++ML +   PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   YLNGDRLRRDKTNPTLKRRLGYLPDDYPLYKELTVWDYLDYFARLYLLKEPKRTKRLHEV  123
             + G  L  +K   ++ + +G L +  + Y +LT  + +    R  LL  PK  K ++E 
Sbjct  62   NILGKEL-NEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQR--LLDLPK--KNVNEA  116

Query  124  LQLIQLENKRNSLISTLSRGMKQRLCLARTIIHEPIILLLDEPVSGLDPIARMQFREIIK  183
            L++++LEN++N  +S  S GMKQRL +A +I+  P +L+LDEP +GLDP +  ++RE+IK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  184  VLQEA-GMTILISSHVLSDLAELCTSVGIMELGFLVESASLQELYQRCATQ  233
             L E  GMT+LISSH+LS++ ++ TS+GI++ G LV   S++EL +R  +Q
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQ  227

550) SCD20.03 in NC_003888


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  133 bits (487),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 101/248 (41%), Positives = 163/248 (66%), Gaps = 8/248 (3%)

Query  19   DAVIATRALTKRYRGGQLAVDGLDLTVPAGSVFGFLGPNGSGKTTTIRMLMGLIEPTSGS  78
            + +I T+ L+K Y    + V ++DL VP G+V+GFLGPNG+GK+TT++ML+GL  PT G+
Sbjct  2    EMIIRTQRLSKEY-NKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  79   ARVLGRPMPRAAR-AVLPRVGALIEGPALYGFLSGRDNLLRYDAADPTADPRTRRErvaa  137
              +LG+ +    R ++L  +G+LIE+P+ YG L+G +N+      +   D    +  V  
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENM---TIMQRLLD--LPKKNVNE  115

Query  138  aldrvglaaaggkkakaYSLGMKQrlglaaallqprrllvlDEPTNGLDPQGMREIRSLV  197
            AL  V L     KK   YSLGMKQRLG+A A+++  +LL+LDEPTNGLDP G+ EIR L+
Sbjct  116  ALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELI  175

Query  198  RELASD-GTTVFLSSHLLDEIEQVCTHAAVMAQGRLITQGAVADLAAGARGRLVVTTPDA  256
            + L+   G TV++SSHLL EI+Q+ T  +++ +G L+ Q+++ +L   +++++ + T + 
Sbjct  176  KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNV  235

Query  257  GDAARVLK  264
              A ++L+
Sbjct  236  VSAQKLLN  243

551) Desaci_4206 in NC_018068


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  133 bits (489),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 87/213 (41%), Positives = 149/213 (70%), Gaps = 2/213 (0%)

Query  1    MEKVLEVAGLTKIYKNGRGVKDITFDVCTGDIFGFLGPNGAGKTTVMKGITGLNTLQKGH  60
            ME ++    L+K Y++   VKDI + V  G ++GFLGPNGAGK+T +K + GL    +G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   VKILGYNLDSQFE-NAMRNVGAIIETADVYEYMSAYENLKFIARFHQTIHEEDIDNILEL  119
            ++ILG +L+ +   + ++++G++IE++  Y  +++ EN+ ++ R+ + +   ++++ L +
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLD-LPKKNVNEALKI  119

Query  120  VNLTSYKQEKASKFSLGMKQrlalarallPNPKLIILDEPTNGLDIEGTVQMRNLIKELA  179
            V L + K+ K S++SLGMKQRL++A A++  PKL+ILDEPTNGLD  G  ++R+LIK L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  AKRKMTFFISSHLVHEIELMCNKVAIIHEGRLV  212
             K  MT +ISSHL+ EI+ +   ++II++G LV
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELV  212

552) Bcell_3388 in NC_014829


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 93/224 (42%), Positives = 147/224 (66%), Gaps = 11/224 (4%)

Query  3    LITTKQLSKSFKGTEAVKGIDLHIKEGVCTALLGPNGAGKSTTLNMLTGLMKPTSGSIAF  62
            +I T++LSK ++    VK+IDL++ +G   ++LGPNGAGKSTTL+ML GL KPT G+I +
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  63   DERYSGDRRQY-----IGYLPQYPKFYGWMTGEEYLVYAGQLGSLSKEDAKARAEELLKL  117
              +   ++ +      IG L + P +YG +TG E +    +L  L+K +     +E LK+
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNV----NEALKI  119

Query  118  VGLIDDRKKRIQGYSGGMKQRLGIAQALVHKPKLVILDEPVSALDPKGRREVLELMDKLK  177
            V L ++++K++  YS GMKQRLGIA A++  PKL+ILDEP ++LDP G  E+ EL+  L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  178  E--TTSILFSTHVLHDAEEICEEIFIINHGELIVSGDLQTLKKK  219
            E    ++L+S+H+L + ++I   I IINHGEL+  + ++ L ++
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

553) Mbar_A0659 in NC_007355


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  132 bits (484),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 91/214 (43%), Positives = 153/214 (72%), Gaps = 11/214 (5%)

Query  1    MNVEKGSIYGFLGQNGAGKTTTIKLLSGLSIPTQGQIFVYGMDLSSES--GKVKQILGLV  58
            + V +G++YGFLG NGAGK+TT+K+L GL+ PTQG+I + G +L+  +  + +K+I +L+
Sbjct  25   LRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKDIGSLI  84

Query  59   PQDSGFYDERTALNHMVYYGRLKGLSKKESLEQSRILLNQVGLGNEMFKKVGYFSHGMKT  118
             + +++Y++ T+L++M    RL +L+KK+  E  +I    V L N+  KKV+ +S GMK 
Sbjct  85   -ESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKI----VRLENQKNKKVSQYSLGMKQ  139

Query  119  RLGIAQALLNSPKVLILDEPTNGLDPVGIRQIRQILFE-CNNNGITIFLSSHNLLEIQEI  177
            RLGIA A+++ PK+LILDEPTNGLDP GI +IR+++    ++ G+T+++SSH L EI++I
Sbjct  140  RLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQI  199

Query  178  CTYVGILDKGKLIAESTIEKIRHLESNGVITIGV  211
             T +GI++ G L+ +   + I++L++ G   I++
Sbjct  200  ATSIGIINHGELVFQ---DSIKELHNRGQSQIAI  230

554) TPE_0990 in NC_022097


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  132 bits (486),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 106/248 (43%), Positives = 166/248 (67%), Gaps = 2/248 (0%)

Query  1    MKEAIKTINLSKKYGKHLVVDDLNLSIKCGEIVGFLGLNGAGKTTTMRMLLGLIKPTTGE  60
            M   I+T  LSK Y K + V D++L +  G + GFLG NGAGK+TT++MLLGL KPT G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   CYIQGKKV-DRYNLEVRNEIGYIIETPYSYPDLTVKENLEIVSTLRGVRNTENIDKVIEK  119
              I GK + ++  + + ++IG +IE+P  Y +LT  EN+ I+  L ++ +  N++  +  
Sbjct  61   INILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKK-NVNEALKI  119

Query  120  LKLNRHKDKQVKHLSLGNVARLGIAKAIIHKPKILILDEPTNGLDPLGVIEVRKLLNELA  179
            ++L+ +K+K+V + SLG   RLGIA AI+  PK+LILDEPTNGLDP G+ E+R L++ L+
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  NVLGTTILISSHKLEEiakiatriiiiHEGRLIREVeskeldkylekkllVSGSDNRAIK  239
            +  G T+LISSH L EI +IAT I II++G L+ +   KEL++  + ++ +   +  + +
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQ  239

Query  240  EVLSNKGY  247
             +L+ KGY
Sbjct  240  KLLNTKGY  247

555) Bcoa_3072 in NC_016023


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  131 bits (479),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 116/289 (41%), Positives = 195/289 (68%), Gaps = 18/289 (6%)

Query  21   VDQVSFEVKKGEVFGLLGPNGAGKTTIIRMIVSLMKRTSGEIFINGKSL-DKDFKGALNE  79
            V ++ + V +G V+G+LGPNGAGK+T ++M+++L K T G+I I GK L +K+  + L++
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD  79

Query  80   IGAIVENPEFYPYMTGYQNLVHYKRM---SRKPVSEERLWEVAKLVKLEDALKQKVKTYS  136
            IG+++E+P +Y  +TG +N+   +R+   ++K V+E       K+V+LE+  ++KV  YS
Sbjct  80   IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEA-----LKIVRLENQKNKKVSQYS  134

Query  137  LGMRQRLGVAQAILHQPSLLILDEPTNGLDPQGIREFRGYLRelags-gvsvlvsshlls  195
            LGM+QRLG+A AI+  P LLILDEPTNGLDP GI E+R  ++ L+   G++VL+SSHLLS
Sbjct  135  LGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLS  194

Query  196  emelmCDRYAIIEKGKLIHIETMAETTTVKQDDRRDILFATDDSESAKQTVEKQLHFPVS  255
            E++ +    +II+ G L+  +++ E   + + ++ +I + T +  SA++ ++ +  + +S
Sbjct  195  EIDQIATSIGIINHGELVFQDSIKE---LHNRGQSQIAIKTKNVVSAQKLLNTK-GY-MS  249

Query  256  IVDDTRILVSAAYKDAAV--INATLVGSGCNVYEIHFEKKTLEDRFLEL  302
            +++D   L     KD+ V  IN+ LV S  +V+ I+ +KK+LED FLEL
Sbjct  250  LIQDG-YLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL  297

556) Amuc_1760 in NC_010655


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  130 bits (476),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 86/213 (41%), Positives = 148/213 (70%), Gaps = 10/213 (4%)

Query  28   VRGIDMNIRQGEVYGLIGPNGSGKSTLMKALLGLVRPTEGSCSIFGRSSLAPDSK----E  83
            V++ID+ + QG VYG++GPNG+GKST +K LLGL +PT+G+ +I+G+  L   ++     
Sbjct  20   VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK-ELNEKNRISILK  78

Query  84   EVGFLPENPYFYKFLTGAETVSFYGRLCGLSGkslkekvrellelvglADAADRRLGGYS  143
            ++G L E+P +Y  LTG E +++  RL +L+    K +V E L +V L +  +++++ YS
Sbjct  79   DIGSLIESPSYYGHLTGLENMTIMQRLLDLP----KKNVNEALKIVRLENQKNKKVSQYS  134

Query  144  KGMLQRIGMAQALVQSPRLLVLDEPTAGVDPLGSRDIRNIIENLKGR-GMTVFLCSHLLE  202
             GM QR+G+A A+++ P+LL+LDEPT G+DP G  +IR++I +L  + GMTV++ SHLL 
Sbjct  135  LGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLS  194

Query  203  QVQEVCDRVGVIFKGLLIAEGSVNELTRDSDKQ  235
            +++++   +G+I  G L+ ++S++EL   ++ Q
Sbjct  195  EIDQIATSIGIINHGELVFQDSIKELHNRGQSQ  227

557) Tpen_1333 in NC_008698


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  130 bits (476),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 96/228 (43%), Positives = 156/228 (69%), Gaps = 10/228 (4%)

Query  1    MELAVETDRLVKVYRDRGSEVKALDEVSLRVPAGSIFGIFGPNGSGKTTlisillglilP  60
            ME+ + T+RL K Y    + +  + ++ LRVP G+++G++GPNG+GK+T + +LLGL  P
Sbjct  1    MEMIIRTQRLSKEY----NKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKP  56

Query  61   TRGSARVLGYDVV-KQSLSVRKRVGLLPEAFGLYEHMTALDNLVFFGLLDEVPKGEVEKR  119
            T+G+  +LG ++  K+ +S+ K +G L E+ + Y H+T+L+N+ +   L ++PK +V+  
Sbjct  57   TQGNINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVN--  114

Query  120  AREVLELVGLSNKAGAKVSTFSRGMIQRLGLAQVLMKDPDLVILDEPTMGLDPDGIELLK  179
              E L +V L N+   KVS +S GM QRLG+A  +MK P L+ILDEPT GLDP GIE ++
Sbjct  115  --EALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIR  172

Query  180  ILVLGLRER-GKTIMISTHLLHEVGNICTHAAIIRKGKVLAQGSLEEV  226
             L+ +L E+ G T++IS+HLL E+++I T  +II  G ++ Q+S+ E+
Sbjct  173  ELIKSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

558) Cri9333_1783 in NC_019753


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  128 bits (470),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 99/227 (44%), Positives = 153/227 (68%), Gaps = 6/227 (2%)

Query  4    ELAIRTCGLIKQFDRQVVVNDVDLEVETGEVYGLIGPNGAGKTTLIRMLAAAEEPTTGEI  63
            E+ IRT  L K++++   V+D+DL V  G VYG++GPNGAGK+T ++ML +   PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   YINGDRLSSDQSNSTLKRRIGylpddfplyddlTVWDYLDYFARLYHLRSPRRTQRLREV  123
             I G  L+  +  S LK  IG L +  + Y++LT  + +    RL +L  P++   + E 
Sbjct  62   NILGKELNEKNRISILK-DIGSLIESPSYYGHLTGLENMTIMQRLLDL--PKKN--VNEA  116

Query  124  LEMVQLTSKRNSMIANLSRGMKQRLGLARTIIHEPILLLLDEPVSGLDPIARMQFREIIK  183
            L +V+L +++N  +++ S GMKQRLG+A +I+  P LL+LDEP +GLDP +  ++RE+IK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  184  VLQEA-GMTILISSHVLSDLAELCTSVGIMELGYLVESASLKELYQR  229
             L E  GMT+LISSH+LS++ ++ TS+GI++ G LV   S+KEL +R
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

559) LRHM_0608 in NC_017482


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 102/254 (41%), Positives = 173/254 (69%), Gaps = 14/254 (5%)

Query  1    MDYCIQTQGLSKHFKGVTALKSVNMNVKLGEIYGFLGPNGAGKSTVFKLLMALLKPDAGK  60
            M+  I+TQ LSK+++ +  +K +++ V  G +YGFLGPNGAGKST +K+L++L KP  G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IMRQAETLSQGLN-----GFFRQTGSIIENPYFYEDLSGYENLKIHARYMGYYVENDAQT  115
            I    + L++ LN     +++++ GS+IE+P +Y +L+G EN+ I  R ++      ++ 
Sbjct  61   I----NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-----PKK  111

Query  116  KIKDILRLVHLSDTEKKPVRAYSLGMKQRLAMARALLCDPKLLILDEPFNGLDPEGLAKM  175
            ++++ L++V+L +  +K V  YSLGMKQRL++A A++  PKLLILDEP NGLDP G+  +
Sbjct  112  NVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEI  171

Query  176  rqllldlnqrqrTTiiisshllseisaiaDTIGVLKQGVLIQEIAMEKVRQKERQCIEIK  235
            R+L+  L ++   T++ISSHLLSEI  IA +IG++++G L+ + ++  ++++ +  I IK
Sbjct  172  RELIKSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIK  231

Query  236  VSNPNRASCVLEEK  249
              N   A  +L+ K
Sbjct  232  TKNVVSAQKLLNTK  245

560) ycbN in NC_013198


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 102/254 (41%), Positives = 173/254 (69%), Gaps = 14/254 (5%)

Query  1    MDYCIQTQGLSKHFKGVTALKSVNMNVKLGEIYGFLGPNGAGKSTVFKLLMALLKPDAGK  60
            M+  I+TQ LSK+++ +  +K +++ V  G +YGFLGPNGAGKST +K+L++L KP  G+
Sbjct  1    MEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGN  60

Query  61   IMRQAETLSQGLN-----GFFRQTGSIIENPYFYEDLSGYENLKIHARYMGYYVENDAQT  115
            I    + L++ LN     +++++ GS+IE+P +Y +L+G EN+ I  R ++      ++ 
Sbjct  61   I----NILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDL-----PKK  111

Query  116  KIKDILRLVHLSDTEKKPVRAYSLGMKQRLAMARALLCDPKLLILDEPFNGLDPEGLAKM  175
            ++++ L++V+L +  +K V  YSLGMKQRL++A A++  PKLLILDEP NGLDP G+  +
Sbjct  112  NVNEALKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEI  171

Query  176  rqllldlnqrqrTTiiisshllseisaiaDTIGVLKQGVLIQEIAMEKVRQKERQCIEIK  235
            R+L+  L ++   T++ISSHLLSEI  IA +IG++++G L+ + ++  ++++ +  I IK
Sbjct  172  RELIKSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIK  231

Query  236  VSNPNRASCVLEEK  249
              N   A  +L+ K
Sbjct  232  TKNVVSAQKLLNTK  245

561) MODMU_2651 in NC_017955


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  127 bits (464),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 89/218 (41%), Positives = 144/218 (67%), Gaps = 4/218 (1%)

Query  1    MITIDSLTKRYGAQLAVSDVSFSCTPGTVTGFLGPNGAGKSTTLRALVGLATPTSGTATI  60
            +I  + L+K Y   + V D+ +    G+V GFLGPNGAGKSTTL+ L+GLA PT G   I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  61   GGRAYRDLPNAG--RQVGVLLDAGAQHAGRTGREvltlaalvlgvgQERVDEVLGRVGLA  118
             G+   +    +  +++G L+++ +  +  TG E +T+   +L++ +  V+E L  V L 
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLE  123

Query  119  GKPAAKRVGNYSLGMKQRLGLAAALLGDPQVLVLDEPANGLDPDGIFWMRGLLRGFADR-  177
                 K+V++YSLGMKQRLG+A A++  P++L+LDEP+NGLDP GI  +R L+++++++ 
Sbjct  124  N-QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY  182

Query  178  GGTVLLSSHLLREVEAVADQLVVIAGGRIVARGSKQEL  215
            G TVL+SSHLL E++ +A  + +I  G +V ++S +EL
Sbjct  183  GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

562) Cyan8802_2298 in NC_013161


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 95/237 (41%), Positives = 155/237 (66%), Gaps = 7/237 (2%)

Query  4    ELAIATNRLTKQFDRYVAVNQVELQVEIGEVYGLIGPNGAGKTTLIRMLSAAEEPTTGEI  63
            E+ I T+RL+K++++   V++++L+V  G VYG++GPNGAGK+T ++ML +   PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   YLYGDRLLRSNSNPHLKQRLGYLPDDFPLYEDLNVWDYLEYFARLYYLKSPHrrrrlqev  123
             + G  L   N  + LK+ +G L +  + Y +L   + +    RL  L   +    ++E 
Sbjct  62   NILGKELNEKNRISILKD-IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN----VNEA  116

Query  124  lelvqlTSKRDSKINTLSRGMKQRLSLARTIIHEPMLLFLDEPVSGLDPIARMQFREIIK  183
            L +V+L ++++ K++  S GMKQRL++A +I+  P LL+LDEP +GLDP +  ++RE+IK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  184  VLQTA-GMTILISSHVLSDLAQLCTSVGIMELGSLVESTSLTELYQRLSLQQIIITT  239
             L    GMT+LISSH+LS++ Q+ TS+GI++ G LV   S+ EL +R +  QI I T
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR-GQSQIAIKT  232

563) PCC8801_2246 in NC_011726


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  123 bits (451),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 95/237 (41%), Positives = 156/237 (66%), Gaps = 7/237 (2%)

Query  4    ELAIATNRLTKQFDRYVAVNQVELQVEIGEVYGLIGPNGAGKTTLIRMLSAAEEPTTGEI  63
            E+ I T+RL+K++++   V++++L+V  G VYG++GPNGAGK+T ++ML +   PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   YLYGDRLLRNNSNPHLKQRLGYLPDDFPLYEDLNVWDYLEYFARLYYLKSPHrrrrlqev  123
             + G  L  +N  + LK+ +G L +  + Y +L   + +    RL  L   +    ++E 
Sbjct  62   NILGKELNEKNRISILKD-IGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN----VNEA  116

Query  124  lelvqlTSKRDSKINTLSRGMKQRLSLARTIIHEPMLLFLDEPVSGLDPIARMQFREIIK  183
            L +V+L ++++ K++  S GMKQRL++A +I+  P LL+LDEP +GLDP +  ++RE+IK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  184  VLQTA-GMTILISSHVLSDLAQLCTSVGIMELGSLVESTSLTELYQRLSLQQIIITT  239
             L    GMT+LISSH+LS++ Q+ TS+GI++ G LV   S+ EL +R +  QI I T
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR-GQSQIAIKT  232

564) Bmur_2810 in NC_014150


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  122 bits (447),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 142/221 (65%), Gaps = 7/221 (3%)

Query  1    MISVENLNKYYGDFHALKGVSFEINAGEIVGILGPNGAGKSTTLRILTCYLSPTSGNAVI  60
            +I  + L+K Y  +  +K++ + +  G + G+LGPNGAGKSTTL++L     PT GN  I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  61   DGKSILDNE-MEVKKVIGYLPESAPLYDDMSVFDYLVYMAEIQELERSRLNERLKYVVEA  119
             GK + +++ + + K IG L ES++ Y++++ ++ +  M  + +L +  +NE LK V   
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIV---  120

Query  120  CSLKDVISKSIGELSKGYKQRVGIAGAIIHDPKILILDEPTNGLDPNQIVEIRELIKELG  179
              L +  +K +++ S G KQR+GIA AI+  PK+LILDEPTNGLDP  I EIRELIK L 
Sbjct  121  -RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  180  K--EKTVLISTHILSEVEATCSRAIIINQGNVIADADPKHL  218
                 TVLIS+H+LSE++   +   IIN+G+++ +   K+L
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

565) Osc7112_1679 in NC_019729


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  122 bits (447),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 94/227 (42%), Positives = 154/227 (68%), Gaps = 6/227 (2%)

Query  4    QLAIETRGLTKQFDRHIAVNDIDLQVAAGEVCGLIGPNGAGKTTLLRMLAAAEEPTVGEI  63
            ++ I T+ L+K++++ + V+DIDL+V+ G V G++GPNGAGK+T L+ML +   PT G+I
Sbjct  2    EMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNI  61

Query  64   YINGDRLLRDRSHPILKQRIGflpddfplyddlTVWDYLDYFARLYNLQQPRRRERINSV  123
             I G  L      +ILK+ IG L +  + Y++LT  + +    RL +L  P++   +N  
Sbjct  62   NILGKELNEKNRISILKD-IGSLIESPSYYGHLTGLENMTIMQRLLDL--PKK--NVNEA  116

Query  124  LELVQLTNKRNSLISTLSRGMKQRLSLGRTIIHEPLLLLLDEPVSGLDPIARMQFREIIK  183
            L +V+L N++N  +S  S GMKQRL+++ +I+  P LL+LDEP +GLDP +  ++RE+IK
Sbjct  117  LKIVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIK  176

Query  184  VLQEA-GMTVVISSHVLSDLAELCSWVGIMELGYLVESAPLQELYKR  229
             L E  GMTV+ISSH+LS++ ++ + +GI++ G LV   +++EL +R
Sbjct  177  SLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR  223

566) Emtol_1693 in NC_018748


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  119 bits (436),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 149/228 (66%), Gaps = 7/228 (3%)

Query  1    MSIKIQNLSKVYGTQRAVDDISFEVAKGEIVGFLGPNGAGKSTTMKILTGYLPATDGSAV  60
            M I+ Q LSK Y     V DI + V++G + GFLGPNGAGKSTT+K+L G   +T+G+  
Sbjct  3    MIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNIN  62

Query  61   VNGFDVK-ISPMEVKKSIGYLPEHNPLYLDMYVREFLEFVGSLYGLRCKTLEIKVAETIK  119
            + G +++  + + + K IG L E  + Y ++   E + ++  L +L  K     V E++K
Sbjct  63   ILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKN----VNEALK  118

Query  120  MVGLDLEKHKKISQLSKGYRQRVGLAQALIHNPDVLILDEPTTGLDPNQLVEIRELIKSV  179
            +V L+ +K+KK+SQ S G +QR+G+A A++  P +LILDEPT GLDP  + EIRELIKS+
Sbjct  119  IVRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSL  178

Query  180  GRN--KTVIFSTHIMQEVEAICDRVVIINRGKIVANGTLSELKQGGKG  225
              +   TV++S+H++ E++ I   + IIN+G +V ++++ EL + G++
Sbjct  179  PEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQS  226

567) Ndas_2492 in NC_014210


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  111 bits (405),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 88/213 (42%), Positives = 135/213 (64%), Gaps = 15/213 (7%)

Query  1    MSLIDIRDVSMAHGRHRVLH--GIDLRVEPGRVYGLLGPNGSGKTTLLKSVLGANDHT-G  57
            M +I IR   ++   +++++  +IDLRV  G VYG+LGPNG+GK+T LK +LG    T G
Sbjct  1    MEMI-IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQG  59

Query  58   AIE----------RAPGLR-VGRLIEYPAFYGGLTLRENLELHARYLRTPLDEVPGLLAE  106
             I+          R + L+ +G LIE P++YG LT  EN+ +  R L  P  +V   L  
Sbjct  60   NINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKI  119

Query  107  VGLGERADLRFSRTSLGMRQRLGIARALLGEPGLVLLDEPTNGLDPIGIRDIRELVRAVQ  166
            V L ++ + + S+ SLGM+QRLGIA A++  P L++LDEPTNGLDP GI +IREL++++ 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  167  RERGTSMIVSSHNLTEIASLADHLLFMRAGRIV  199
               G ++++SSH L+EI  +A  + ++  G +V
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELV  212

568) srtF in NC_021670


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

569) epiF in NC_002951


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

570) BN843_18240 in NC_021059


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

571) SAS1741 in NC_002953


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

572) bsaF in NC_003923


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

573) SAOUHSC_01948 in NC_007795


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

574) bsaF in NC_009641


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  8    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  67
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  68   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  121
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  122  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  180
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  181  siiisshilseiQVLADHIGIIHEGELKYQQ  211
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

575) SAT0131_01939 in NC_017347


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

576) SATW20_18150 in NC_017331


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

577) epiF in NC_007793


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

578) epiF in NC_010079


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

579) SAVC_08325 in NC_016912


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 157/211 (75%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTRND----LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +  ++    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

580) yxlF in NC_017030


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  104 bits (376),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 138/221 (63%), Gaps = 7/221 (3%)

Query  1    MIQVEGLTKFYGEHAAIRDLAFTIGQGEVIGFLGLNGAGKSTTLKILGCVLLPTSGRVVI  60
            +I+ + L+K Y     ++D+ + + QG V GFLG NGAGKSTTLK+L  +  PT G + I
Sbjct  4    IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI  63

Query  61   DGHDVVSQSH-EVRQRIGYLPDVPPVYEEMTVGEYLAYVARLRDVPAKATASHVGEAEEK  119
             G ++  +++  + + IG L + P+ Y ++T  E ++ + RL D+P K    +V EA   
Sbjct  64   LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKK----NVNEALKI  119

Query  120  TGLRDVHGEVISTLSHGYRQRVGLAQALVHKPALLILDEPTSGLDPLQIVEMRDVIRGL-  178
              L +     +S  S G +QR+G+A A++  P LLILDEPT+GLDP  I E+R++I++L 
Sbjct  120  VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP  179

Query  179  -KGAHTVLVSSHILPEISQTCDRLLIIHKGTLLAQGSEEEL  218
             K + TVL+SSH+L+EI Q    + II+ G L+ Q+S  EL
Sbjct  180  EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL  220

581) MS7_1818 in NC_017351


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  103 bits (375),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 156/211 (74%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEIKLDNR  65
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I++  +
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  66   PMTR----NYLHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EInsvlslvnlnv  119
             +      + L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++N  L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

582) SAB1678c in NC_007622


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  103 bits (372),  Expect = 9e-24, Method: Compositional matrix adjust.
 Identities = 94/211 (45%), Positives = 159/211 (76%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEI-LLDN  64
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I +L++
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  65   QPMKRND---LHKVGSLIETPTTYNHLSAQDNLKIVCLNESVDFS--EIknvlslvnlnv  119
            +   +N    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++++ L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

583) SAOV_1802 in NC_017337


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 94/211 (45%), Positives = 159/211 (76%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEI-LLDN  64
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I +L++
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  65   QPMKRND---LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EIknvlslvnlnv  119
            +   +N    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++++ L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215

584) SARLGA251_17010 in NC_017349


> X92982|12|G11|1770140|CAA63569.1|Clostridium_difficile_VPI10463|-|24982..25887|cdd4|-|-
Length=301

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 94/211 (45%), Positives = 159/211 (76%), Gaps = 9/211 (4%)

Query  6    TENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTTLMKIICGILQQDSGEI-LLDN  64
            T+ +SK +++   +K+I++ + +  VYG+LG NGAGK+T +K++ G+ +   G+I +L++
Sbjct  7    TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK  66

Query  65   QPMKRND---LHKVGSLIETPATYNHLSAQDNLKIVCLNESVDFS--EIknvlslvnlnv  119
            +   +N    L  +GSLIE+P+ Y HL++ +N+ I  ++  +D++  ++++ L +V L+ 
Sbjct  67   ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTI--MQRLLDLPKKNVNEALKIVRLEN  124

Query  120  dkkkkvkdFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDPYGIQELRELLKLLTEQ-GT  178
            +K+KKV ++SLGMKQRLGIAMA++K P +L+LDEP+NGLDP GI+E+REL+K L E+ G 
Sbjct  125  QKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGM  184

Query  179  siiisshilseiQVLADHIGIIHEGELKYQQ  209
            +++ISSH+LSEI+ +A  IGII++GEL +Q+
Sbjct  185  TVLISSHLLSEIDQIATSIGIINHGELVFQD  215