Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
4e-16 |
100 |
|
type III secretion lipoprotein HrpT |
NC_013961 (Erwinia amylovora CFBP1430) |
4e-16 |
100 |
|
HrpT protein |
NC_010694 (Erwinia tasmaniensis Et1/99) |
7e-16 |
98 |
|
type III secretion lipoprotein HrpT |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
1e-15 |
98 |
|
Hrp/hrc secretion/translocation pathway protein HrpT |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
1e-15 |
98 |
|
hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpT protein |
NC_017445 (Erwinia sp. Ejp617) |
1e-15 |
98 |
|
type III secretion lipoprotein |
NC_012917 (Pectobacterium carotovorum PC1) |
2e-10 |
58 |
|
type III secretion lipoprotein |
NC_018525 (Pectobacterium carotovorum PCC21) |
4e-10 |
56 |
|
type III secretion lipoprotein |
NC_012912 (Dickeya zeae Ech1591) |
2e-08 |
54 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='U56662' AND ph.id_pai_orf='12' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc