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Homologs of hrpT gene of U56662

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpT
( YP_003539946.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

4e-16

100

2) hrpT
( YP_003529908.1 )

type III secretion lipoprotein HrpT

NC_013961
(Erwinia amylovora CFBP1430)

4e-16

100

3) hrpT
( YP_001906483.1 )

HrpT protein

NC_010694
(Erwinia tasmaniensis Et1/99)

7e-16

4) hrpT
( YP_005804071.1 )

type III secretion lipoprotein HrpT

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-15

5) hrpT
( YP_002650054.1 )

Hrp/hrc secretion/translocation pathway protein HrpT

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-15

6) hrpT
( YP_005818275.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpT protein

NC_017445
(Erwinia sp. Ejp617)

1e-15

7) PC1_2191
( YP_003017766.1 )

type III secretion lipoprotein

NC_012917
(Pectobacterium carotovorum PC1)

2e-10

8) PCC21_022690
( YP_006646925.1 )

type III secretion lipoprotein

NC_018525
(Pectobacterium carotovorum PCC21)

4e-10

9) Dd1591_1908
( YP_003004237.1 )

type III secretion lipoprotein

NC_012912
(Dickeya zeae Ech1591)

2e-08

• Sequence Alignments

1) hrpT in NC_013971


> U56662|12|G9|1336094|AAB49180.1|Erwinia_amylovora_321|+|5549..5743|hrpT|-|HrpT
Length=64

 Score = 77.6 bits (275),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 45/45 (100%), Positives = 45/45 (100%), Gaps = 0/45 (0%)

Query  20  GRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64
           GRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE
Sbjct  20  GRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64

2) hrpT in NC_013961


> U56662|12|G9|1336094|AAB49180.1|Erwinia_amylovora_321|+|5549..5743|hrpT|-|HrpT
Length=64

 Score = 77.6 bits (275),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 45/45 (100%), Positives = 45/45 (100%), Gaps = 0/45 (0%)

Query  20  GRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64
           GRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE
Sbjct  20  GRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64

3) hrpT in NC_010694


> U56662|12|G9|1336094|AAB49180.1|Erwinia_amylovora_321|+|5549..5743|hrpT|-|HrpT
Length=64

 Score = 76.5 bits (271),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 44/45 (98%), Positives = 44/45 (98%), Gaps = 0/45 (0%)

Query  20  GRHDNGLACTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64
           GRHDNGL CTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE
Sbjct  20  GRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64

4) hrpT in NC_017445


> U56662|12|G9|1336094|AAB49180.1|Erwinia_amylovora_321|+|5549..5743|hrpT|-|HrpT
Length=64

 Score = 76.0 bits (269),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 44/45 (98%), Positives = 45/45 (100%), Gaps = 0/45 (0%)

Query  20  GRHDNGLECTSVDCRPQSQARQLVIWWQPGLRNGPADYTRVSVNE  64
           GRHDNGLECTSVDCRPQSQA+QLVIWWQPGLRNGPADYTRVSVNE
Sbjct  20  GRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64

5) hrpT in NC_017390


> U56662|12|G9|1336094|AAB49180.1|Erwinia_amylovora_321|+|5549..5743|hrpT|-|HrpT
Length=64

 Score = 76.0 bits (269),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 44/45 (98%), Positives = 45/45 (100%), Gaps = 0/45 (0%)

Query  20  GRHDNGLECTSVDCRPQSQARQLVIWWQPGLRNGPADYTRVSVNE  64
           GRHDNGLECTSVDCRPQSQA+QLVIWWQPGLRNGPADYTRVSVNE
Sbjct  20  GRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64

6) hrpT in NC_012214


> U56662|12|G9|1336094|AAB49180.1|Erwinia_amylovora_321|+|5549..5743|hrpT|-|HrpT
Length=64

 Score = 76.0 bits (269),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 44/45 (98%), Positives = 45/45 (100%), Gaps = 0/45 (0%)

Query  20  GRHDNGLECTSVDCRPQSQARQLVIWWQPGLRNGPADYTRVSVNE  64
           GRHDNGLECTSVDCRPQSQA+QLVIWWQPGLRNGPADYTRVSVNE
Sbjct  20  GRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64

7) PC1_2191 in NC_012917


> U56662|12|G9|1336094|AAB49180.1|Erwinia_amylovora_321|+|5549..5743|hrpT|-|HrpT
Length=64

 Score = 58.4 bits (202),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 27/47 (58%), Positives = 42/47 (90%), Gaps = 1/47 (2%)

Query  18  CNAPRQVA-NCASVTCRPQPETRQLIIWWQPDLRSGPADYSRVSVDE  63
           C + ++ + +C+SV CRPQ++++QL+IWWQP+LR+GPADY+RVSV+E
Sbjct  18  CAGRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64

8) PCC21_022690 in NC_018525


> U56662|12|G9|1336094|AAB49180.1|Erwinia_amylovora_321|+|5549..5743|hrpT|-|HrpT
Length=64

 Score = 57.9 bits (200),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 26/47 (56%), Positives = 42/47 (90%), Gaps = 1/47 (2%)

Query  18  CNAPRQVA-NCASVSCRPQPETRQLIIWWQPDLRSSPADYSRVSVDE  63
           C + ++ + +C+SV CRPQ++++QL+IWWQP+LR++PADY+RVSV+E
Sbjct  18  CAGRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSVNE  64

9) Dd1591_1908 in NC_012912


> U56662|12|G9|1336094|AAB49180.1|Erwinia_amylovora_321|+|5549..5743|hrpT|-|HrpT
Length=64

 Score = 52.1 bits (178),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 24/45 (54%), Positives = 36/45 (80%), Gaps = 1/45 (2%)

Query  17  CAARTPPG-ACVSVSCRPDPDSRQMVIWWQTDMRPGAADFTRVNV  60
           CA+R   G  C SV CRP+++++Q+VIWWQ ++R G+AD+TRV+V
Sbjct  18  CAGRHDNGLECTSVDCRPQSQAHQLVIWWQPGLRNGPADYTRVSV  62