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Homologs of kdeP gene of NC_002976_R1

328

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) kdpE
( YP_005740820.1 )

DNA-binding response regulator KdpE

NC_017340
(Staphylococcus aureus 04-02981)

1e-95

100

2) CA347_68
( YP_008126952.1 )

transcriptional regulatory , C terminal family protein

NC_021554
(Staphylococcus aureus CA-347)

1e-95

100

3) SaurJH1_0059
( YP_001315211.1 )

response regulator receiver

NC_009632
(Staphylococcus aureus JH1)

1e-95

100

4) SaurJH9_0057
( YP_001245445.1 )

two component transcriptional regulator

NC_009487
(Staphylococcus aureus JH9)

1e-95

100

5) kdpE
( YP_039536.1 )

response regulator protein

NC_002952
(Staphylococcus aureus MRSA252)

1e-95

100

6) kdpE
( YP_001440659.1 )

hypothetical protein

NC_009782
(Staphylococcus aureus Mu3)

1e-95

100

7) kdpE
( NP_370594.1 )

transcriptional regulator kdpE

NC_002758
(Staphylococcus aureus Mu50)

1e-95

100

8) kdpE
( NP_373306.1 )

hypothetical protein

NC_002745
(Staphylococcus aureus N315)

1e-95

100

9) kdeP
( YP_190033.1 )

DNA-binding response regulator KdeP

NC_002976
(Staphylococcus epidermidis RP62A)

1e-95

100

10) SH0031
( YP_251946.1 )

hypothetical protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

1e-94

11) kdpE(SCCmec)
( YP_005759210.1 )

response regulator protein

NC_017353
(Staphylococcus lugdunensis N920143)

1e-76

12) SLGD_00056
( YP_003470331.1 )

DNA-binding response regulator KdpE

NC_013893
(Staphylococcus lugdunensis HKU09-01)

8e-77

13) kdpE
( YP_008485878.1 )

two-component response regulator KdpE

NC_022222
(Staphylococcus aureus 6850)

1e-61

14) M013TW_2038
( YP_005298418.1 )

DNA-binding response regulator KdpE

NC_016928
(Staphylococcus aureus M013)

4e-61

15) kdpE
( YP_008588480.1 )

response regulator protein

NC_022443
(Staphylococcus aureus SA40)

4e-61

16) kdpE
( YP_008586015.1 )

response regulator protein

NC_022442
(Staphylococcus aureus SA957)

4e-61

17) kdpE
( YP_005742769.1 )

DNA-binding response regulator KdpE

NC_017340
(Staphylococcus aureus 04-02981)

1e-60

18) MS7_2096
( YP_005758491.1 )

response regulator receiver domain/transcriptional regulatory protein

NC_017351
(Staphylococcus aureus 11819-97)

1e-60

19) SAAG_02293
( YP_008449973.1 )

two component transcriptional regulator

NC_022113
(Staphylococcus aureus 55/2053)

1e-60

20) kpdE
( YP_008169196.1 )

KDP operon transcriptional regulatory protein KdpE

NC_021670
(Staphylococcus aureus Bmb9393)

1e-60

21) CA347_2160
( YP_008128967.1 )

transcriptional regulatory , C terminal family protein

NC_021554
(Staphylococcus aureus CA-347)

1e-60

22) SAKOR_02045
( YP_008492233.1 )

Two-component response regulator kdpE

NC_022226
(Staphylococcus aureus CN1)

1e-60

23) kdpE
( YP_186887.1 )

DNA-binding response regulator KdpE

NC_002951
(Staphylococcus aureus COL)

1e-60

24) ECTR2_1935
( YP_005750623.1 )

response regulator

NC_017343
(Staphylococcus aureus ECT-R 2)

1e-60

25) kdpE
( YP_003282985.1 )

DNA-binding response regulator KdpE

NC_013450
(Staphylococcus aureus ED98)

1e-60

26) kdpE
( YP_494682.1 )

DNA-binding response regulator, KdpE

NC_007793
(Staphylococcus aureus FPR3757)

1e-60

27) kdpE
( YP_006238317.1 )

response regulator protein

NC_017763
(Staphylococcus aureus HO 5096 0412)

1e-60

28) SaurJH1_2154
( YP_001317270.1 )

response regulator receiver

NC_009632
(Staphylococcus aureus JH1)

1e-60

29) SaurJH9_2116
( YP_001247474.1 )

two component transcriptional regulator

NC_009487
(Staphylococcus aureus JH9)

1e-60

30) kdpE
( YP_005745452.1 )

winged helix family two component transcriptional regulator

NC_017341
(Staphylococcus aureus JKD6008)

1e-60

31) kdpE
( YP_005740129.1 )

winged helix family two component transcriptional regulator

NC_017338
(Staphylococcus aureus JKD6159)

1e-60

32) kdpE
( YP_005755857.1 )

response regulator protein

NC_017349
(Staphylococcus aureus LGA251)

1e-60

33) BN843_21170
( YP_007869143.1 )

DNA-binding response regulator KdpE

NC_021059
(Staphylococcus aureus M1)

1e-60

34) kdpE
( YP_041529.1 )

response regulator protein

NC_002952
(Staphylococcus aureus MRSA252)

1e-60

35) SAS1984
( YP_044094.1 )

response regulator protein

NC_002953
(Staphylococcus aureus MSSA476)

1e-60

36) kdpE
( YP_001442654.1 )

KDP operon transcriptional regulatory protein

NC_009782
(Staphylococcus aureus Mu3)

1e-60

37) kdpE
( NP_372603.1 )

KDP operon transcriptional regulatory protein

NC_002758
(Staphylococcus aureus Mu50)

1e-60

38) kdpE
( NP_646820.1 )

KDP operon transcriptional regulatory protein KdpE

NC_003923
(Staphylococcus aureus MW2)

1e-60

39) kdpE
( NP_375187.1 )

KDP operon transcriptional regulatory protein KdpE

NC_002745
(Staphylococcus aureus N315)

1e-60

40) SAOUHSC_02315
( YP_500794.1 )

DNA-binding response regulator

NC_007795
(Staphylococcus aureus NCTC 8325)

1e-60

41) kdpE
( YP_001333018.1 )

KDP operon transcriptional regulatory protein

NC_009641
(Staphylococcus aureus Newman)

1e-60

42) kdpE
( YP_417423.1 )

two component sensor protein

NC_007622
(Staphylococcus aureus RF122)

1e-60

43) kdpE
( YP_007584079.1 )

KDP operon transcriptional regulatory protein

NC_020536
(Staphylococcus aureus ST228)

1e-60

44) kdpE
( YP_007621792.1 )

KDP operon transcriptional regulatory protein

NC_020566
(Staphylococcus aureus ST228)

1e-60

45) kdpE
( YP_007623781.1 )

KDP operon transcriptional regulatory protein

NC_020568
(Staphylococcus aureus ST228)

1e-60

46) kdpE
( YP_007578092.1 )

KDP operon transcriptional regulatory protein

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

1e-60

47) kdpE
( YP_007619808.1 )

KDP operon transcriptional regulatory protein

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

1e-60

48) kdpE
( YP_007580100.1 )

KDP operon transcriptional regulatory protein

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

1e-60

49) kdpE
( YP_007582065.1 )

KDP operon transcriptional regulatory protein

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

1e-60

50) kdpE
( YP_007586046.1 )

KDP operon transcriptional regulatory protein

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

1e-60

51) SAT0131_02238
( YP_005753344.1 )

Two component transcriptional regulator, winged helix family

NC_017347
(Staphylococcus aureus T0131)

1e-60

52) kdpE
( YP_001575951.1 )

KDP operon transcriptional regulator

NC_010079
(Staphylococcus aureus TCH1516)

1e-60

53) kdpE
( YP_005747197.1 )

KDP operon response regulator KdpE

NC_017342
(Staphylococcus aureus TCH60)

1e-60

54) kdpE
( YP_005732190.1 )

response regulator protein

NC_017331
(Staphylococcus aureus TW20)

1e-60

55) SAVC_09280
( YP_005291443.1 )

DNA-binding response regulator KdpE

NC_016912
(Staphylococcus aureus VC40)

1e-60

56) kdpE
( YP_006710788.1 )

response regulator protein

NC_018608
(Staphylococcus aureus 08BA02176)

3e-60

57) ST398NM01_2121
( YP_006196150.1 )

KdpE protein

NC_017673
(Staphylococcus aureus 71193)

3e-60

58) SAPIG2121
( YP_005734879.1 )

KDP operon transcriptional regulatory protein KdpE

NC_017333
(Staphylococcus aureus ST398)

3e-60

59) SAOV_2121
( YP_005737558.1 )

two component sensor protein

NC_017337
(Staphylococcus aureus ED133)

4e-60

60) kdpE
( YP_006016414.1 )

two-component response regulator KdpE

NC_017568
(Staphylococcus pseudintermedius ED99)

2e-59

61) SPSINT_0109
( YP_004148274.1 )

DNA-binding response regulator KdpE

NC_014925
(Staphylococcus pseudintermedius HKU10-03)

2e-59

62) SAMSHR1132_19040
( YP_005326406.1 )

response regulator protein

NC_016941
(Staphylococcus aureus MSHR1132)

5e-58

63) kdpE
( YP_695660.1 )

DNA-binding response regulator KdpE

NC_008261
(Clostridium perfringens ATCC 13124)

1e-43

64) kdpE
( YP_005959986.1 )

transcriptional regulatory protein yycF

NC_017542
(Paenibacillus polymyxa M1)

3e-43

65) PPSC2_c2602
( YP_003946813.1 )

hypothetical protein

NC_014622
(Paenibacillus polymyxa SC2)

3e-43

66) CLL_A0982
( YP_001885183.1 )

KDP operon transcriptional regulatory protein KdpE

NC_010674
(Clostridium botulinum Eklund 17B)

3e-42

67) RTO_16110
( YP_007786711.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021015
([Ruminococcus] torques L2-14)

1e-41

68) CL2_04920
( YP_007788555.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021016
(butyrate-producing bacterium SSC/2)

4e-41

69) CC1_26620
( YP_007770703.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021009
(Coprococcus catus GD/7)

4e-41

70) CLH_0919
( YP_001920314.1 )

KDP operon transcriptional regulatory protein KdpE

NC_010723
(Clostridium botulinum Alaska E43)

5e-41

71) pli0051
( NP_569204.1 )

hypothetical protein

NC_003383
(Listeria innocua Clip11262)

2e-40

72) kdpE
( YP_006991445.2 )

response regulator

NC_019425
(Carnobacterium maltaromaticum LMA28)

3e-40

73) kdpE
( YP_004558884.1 )

OmpR family two component system KDP operon response regulator

NC_015600
(Streptococcus pasteurianus ATCC 43144)

3e-40

74) kdpE
( YP_001394860.1 )

KdpE protein

NC_009706
(Clostridium kluyveri DSM 555)

1e-39

75) kdpE
( YP_001699297.1 )

KDP operon transcriptional regulatory protein

NC_010382
(Lysinibacillus sphaericus C3-41)

2e-39

76) CKR_1365
( YP_002471830.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

2e-39

77) CK5_13800
( YP_007804802.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021022
([Ruminococcus] obeum A2-162)

2e-39

78) kdpE
( YP_001088335.1 )

two-component response regulator KdpE

NC_009089
(Clostridium difficile 630)

5e-39

79) kdpE
( YP_003214774.1 )

two-component response regulator

NC_013315
(Clostridium difficile CD196)

5e-39

80) kdpE
( YP_003218218.1 )

two-component response regulator

NC_013316
(Clostridium difficile R20291)

5e-39

81) CK1_37130
( YP_007785085.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021014
(Ruminococcus sp. SR1/5)

6e-39

82) Sulku_0649
( YP_004059515.1 )

winged helix family two component transcriptional regulator

NC_014762
(Sulfuricurvum kujiense DSM 16994)

6e-39

83) CL2_05090
( YP_007788572.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021016
(butyrate-producing bacterium SSC/2)

2e-38

84) OBV_36680
( YP_004883372.1 )

OmpR family two-component response regulator

NC_016048
(Oscillibacter valericigenes Sjm18-20)

5e-38

85) kdpE
( NP_350258.1 )

KDP operon transcriptional regulatory protein KdpE

NC_003030
(Clostridium acetobutylicum ATCC 824)

1e-37

86) kdpE
( YP_004638331.1 )

KDP operon transcriptional regulator KdpE

NC_015687
(Clostridium acetobutylicum DSM 1731)

1e-37

87) kdpE
( YP_005672816.1 )

KDP operon transcriptional regulatory protein KdpE (CheY-like receiver domain and HTH-type DNA-binding domain)

NC_017295
(Clostridium acetobutylicum EA 2018)

1e-37

88) CK3_22910
( YP_007824347.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021035
(butyrate-producing bacterium SS3/4)

4e-37

89) Ddes_1681
( YP_002480258.1 )

winged helix family two component transcriptional regulator

NC_011883
(Desulfovibrio desulfuricans ATCC 27774)

1e-36

90) GPA_09080
( YP_007802072.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021021
(Gordonibacter pamelaeae 7-10-1-bT)

3e-36

91) CCU_16700
( YP_007796530.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021018
(Coprococcus sp. ART55/1)

4e-36

92) Rleg2_5840
( YP_002278113.1 )

transcriptional regulator

NC_011366
(Rhizobium leguminosarum WSM2304)

9e-36

93) FP2_19490
( YP_007837642.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021042
(Faecalibacterium prausnitzii L2/6)

1e-35

94) RHOM_04305
( YP_004837915.1 )

two-component system, OmpR family, KDP operon response regulator

NC_015977
(Roseburia hominis A2-183)

1e-35

95) RBR_02450
( YP_007780455.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021013
(Ruminococcus bromii L2-63)

2e-35

96) kdpE
( YP_008397789.1 )

two-component response regulator of kdp operon

NC_022000
(Proteus mirabilis BB2000)

3e-35

97) kdpE
( YP_002150958.1 )

two-component response regulator of kdp operon

NC_010554
(Proteus mirabilis HI4320)

5e-35

98) FPR_27460
( YP_007801252.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021020
(Faecalibacterium prausnitzii SL3/3)

7e-35

99) EC1_18790
( YP_007798725.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021019
(Eubacterium cylindroides T2-87)

9e-35

100) kdpE
( YP_003578393.1 )

KDP operon transcriptional regulatory protein KdpE

NC_014034
(Rhodobacter capsulatus SB 1003)

3e-34

101) ETA_23200
( YP_001908244.1 )

transcriptional regulator

NC_010694
(Erwinia tasmaniensis Et1/99)

6e-34

102) Palpr_1546
( YP_004042677.1 )

winged helix family two component transcriptional regulator

NC_014734
(Paludibacter propionicigenes WB4)

6e-34

103) Palpr_2668
( YP_004043783.1 )

winged helix family two component transcriptional regulator

NC_014734
(Paludibacter propionicigenes WB4)

1e-33

104) kdpE
( YP_002952301.1 )

KDP operon transcriptional regulatory protein KdpE

NC_012796
(Desulfovibrio magneticus RS-1)

8e-34

105) Elen_2842
( YP_003183178.1 )

winged helix family two component transcriptional regulator

NC_013204
(Eggerthella lenta DSM 2243)

2e-33

106) Clos_0611
( YP_001512167.1 )

two component transcriptional regulator

NC_009922
(Alkaliphilus oremlandii OhILAs)

2e-33

107) Bpro_4253
( YP_551043.1 )

two component transcriptional regulator

NC_007948
(Polaromonas sp. JS666)

3e-33

108) O5Y_17155
( YP_008453995.1 )

turgor pressure transcriptional regulator

NC_022115
(Rhodococcus erythropolis CCM2595)

3e-33

109) kdpE
( YP_002767169.1 )

turgor pressure transcriptional regulator

NC_012490
(Rhodococcus erythropolis PR4)

3e-33

110) kdpE
( YP_003927890.1 )

Kdp operon transcriptional regulatory protein(KdpE)

NC_014558
(Lactobacillus plantarum ST-III)

7e-33

111) KOX_14485
( YP_005018860.1 )

two component transcriptional regulator, winged helix family protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

1e-32

112) Rfer_2540
( YP_523788.1 )

two component transcriptional regulator

NC_007908
(Rhodoferax ferrireducens T118)

2e-32

113) Closa_2943
( YP_003823102.1 )

winged helix family two component transcriptional regulator

NC_014376
(Clostridium saccharolyticum WM1)

2e-32

114) SPPN_03625
( YP_004768025.1 )

osmosensitive K+ channel response regulator

NC_015875
(Streptococcus pseudopneumoniae IS7493)

3e-32

115) Clole_2250
( YP_004309157.1 )

transcriptional regulator

NC_015275
(Clostridium lentocellum DSM 5427)

5e-32

116) Clocel_1852
( YP_003843360.1 )

two component transcriptional regulator, winged helix family

NC_014393
(Clostridium cellulovorans 743B)

1e-31

117) MTES_1370
( YP_004224214.1 )

response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_015125
(Microbacterium testaceum StLB037)

1e-31

118) Anae109_3104
( YP_001380284.1 )

two component transcriptional regulator

NC_009675
(Anaeromyxobacter sp. Fw109-5)

2e-31

119) Plav_0399
( YP_001411679.1 )

two component transcriptional regulator

NC_009719
(Parvibaculum lavamentivorans DS-1)

2e-31

120) kdpE
( YP_005268252.1 )

DNA-binding response regulator KdpE

NC_016894
(Acetobacterium woodii DSM 1030)

2e-31

121) AZC_1569
( YP_001524485.1 )

response regulator receiver

NC_009937
(Azorhizobium caulinodans ORS 571)

3e-31

122) CLJU_c39510
( YP_003782077.1 )

two-component response regulator

NC_014328
(Clostridium ljungdahlii ATCC 49587)

4e-31

123) Dhaf_4626
( YP_002461063.1 )

transcriptional regulator

NC_011830
(Desulfitobacterium hafniense DCB-2)

8e-31

124) DSY4738
( YP_520971.1 )

hypothetical protein

NC_007907
(Desulfitobacterium hafniense Y51)

2e-30

125) MHY_04970
( YP_007834244.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021041
(Megamonas hypermegale ART12/1)

2e-30

126) RPE_4628
( YP_783528.1 )

two component transcriptional regulator

NC_008435
(Rhodopseudomonas palustris BisA53)

2e-30

127) Dhaf_1587
( YP_002458073.1 )

transcriptional regulator

NC_011830
(Desulfitobacterium hafniense DCB-2)

4e-30

128) DSY3761
( YP_519994.1 )

hypothetical protein

NC_007907
(Desulfitobacterium hafniense Y51)

4e-30

129) O3I_031395
( YP_006811202.1 )

two-component system response regulator

NC_018681
(Nocardia brasiliensis HUJEG-1)

4e-30

130) ELI_1563
( YP_003959512.1 )

hypothetical protein

NC_014624
(Eubacterium limosum KIST612)

5e-30

131) Snov_1546
( YP_003693474.1 )

two component transcriptional regulator

NC_014217
(Starkeya novella DSM 506)

6e-30

132) CKL_2262
( YP_001395645.1 )

transcriptional regulator

NC_009706
(Clostridium kluyveri DSM 555)

6e-30

133) CKR_1991
( YP_002472456.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

6e-30

134) Acid_0071
( YP_821372.1 )

two component transcriptional regulator

NC_008536
(Candidatus Solibacter usitatus Ellin6076)

7e-30

135) Acel_1196
( YP_872954.1 )

two component transcriptional regulator

NC_008578
(Acidothermus cellulolyticus 11B)

1e-29

136) kdpE
( YP_005949370.1 )

transcriptional regulatory protein KdpE

NC_017538
(Oligotropha carboxidovorans OM4)

2e-29

137) kdpE
( YP_004631305.1 )

transcriptional regulator KdpE

NC_015684
(Oligotropha carboxidovorans OM5)

2e-29

138) OCAR_4179
( YP_002287193.1 )

KDP operon transcriptional regulatory protein KdpE

NC_011386
(Oligotropha carboxidovorans OM5; ATCC 49405)

2e-29

139) Cbei_2028
( YP_001309153.1 )

two component transcriptional regulator

NC_009617
(Clostridium beijerinckii NCIMB 8052)

2e-29

140) EUBELI_20165
( YP_002935445.1 )

two-component system, OmpR family, KDP operon response regulator KdpE

NC_012780
(Eubacterium eligens ATCC 27750)

4e-29

141) Rsph17025_3787
( YP_001169951.1 )

transposase

NC_009429
(Rhodobacter sphaeroides ATCC 17025)

6e-29

142) H681_10025
( YP_007657419.1 )

two-component response regulator

NC_020829
(Pseudomonas denitrificans ATCC 13867)

8e-29

143) kdpE
( YP_006396308.1 )

transcriptional regulator KdpE

NC_018000
(Sinorhizobium fredii USDA 257)

1e-28

144) ANT_09260
( YP_004173560.1 )

KDP operon transcriptional regulatory protein KdpE

NC_014960
(Anaerolinea thermophila UNI-1)

2e-28

145) kdpE
( YP_001108183.1 )

two-component response regulator

NC_009142
(Saccharopolyspora erythraea NRRL 2338)

3e-28

146) DCF50_p2266
( YP_006914254.1 )

DNA-binding response regulator KdpE

NC_018867
(Dehalobacter sp. CF)

5e-28

147) DHBDCA_p2256
( YP_006911268.1 )

DNA-binding response regulator KdpE

NC_018866
(Dehalobacter sp. DCA)

5e-28

148) Geob_2989
( YP_002538433.1 )

two component transcriptional regulator, winged helix family

NC_011979
(Geobacter daltonii FRC-32)

1e-27

149) Closa_4110
( YP_003824241.1 )

winged helix family two component transcriptional regulator

NC_014376
(Clostridium saccharolyticum WM1)

1e-27

150) GM18_0099
( YP_004196864.1 )

winged helix family two component transcriptional regulator

NC_014973
(Geobacter sp. M18)

1e-27

151) Amet_3307
( YP_001321095.1 )

two component transcriptional regulator

NC_009633
(Alkaliphilus metalliredigens QYMF)

9e-28

152) A1S_2137
( YP_001085166.1 )

hypothetical protein

NC_009085
(Acinetobacter baumannii ATCC 17978)

2e-27

153) Cphy_0742
( YP_001557868.1 )

two component transcriptional regulator

NC_010001
(Clostridium phytofermentans ISDg)

4e-27

154) ZPR_1366
( YP_003583898.1 )

two component transcriptional regulator winged helix family

NC_014041
(Zunongwangia profunda SMA-87)

5e-27

155) Fluta_0551
( YP_004343394.1 )

winged helix family two component transcriptional regulator

NC_015321
(Fluviicola taffensis DSM 16823)

8e-27

156) Sulba_1521
( YP_006404384.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_018002
(Sulfurospirillum barnesii SES-3)

1e-26

157) Emtol_0934
( YP_006872112.1 )

two component transcriptional regulator, winged helix family

NC_018748
(Emticicia oligotrophica DSM 17448)

1e-26

158) Haur_2274
( YP_001545042.1 )

two component transcriptional regulator

NC_009972
(Herpetosiphon aurantiacus DSM 785)

2e-26

159) Mahau_2862
( YP_004464808.1 )

winged helix family two component transcriptional regulator

NC_015520
(Mahella australiensis 50-1 BON)

2e-26

160) Rvan_3283
( YP_004013573.1 )

winged helix family two component transcriptional regulator

NC_014664
(Rhodomicrobium vannielii ATCC 17100)

2e-26

161) Sros_0437
( YP_003336207.1 )

response regulator receiver protein

NC_013595
(Streptosporangium roseum DSM 43021)

2e-26

162) EHR_09260
( YP_006487655.1 )

DNA-binding response regulator

NC_018081
(Enterococcus hirae ATCC 9790)

2e-26

163) Closa_4230
( YP_003824354.1 )

winged helix family two component transcriptional regulator

NC_014376
(Clostridium saccharolyticum WM1)

3e-26

164) Clos_0861
( YP_001512406.1 )

two component transcriptional regulator

NC_009922
(Alkaliphilus oremlandii OhILAs)

4e-26

165) Ent638_1206
( YP_001175938.1 )

two component transcriptional regulator

NC_009436
(Enterobacter sp. 638)

1e-25

166) kdpE
( YP_004375950.1 )

KDP operon transcriptional regulatory protein

NC_015391
(Carnobacterium sp. 17-4)

2e-25

167) kdpE
( YP_001879307.1 )

DNA-binding transcriptional activator KdpE

NC_010658
(Shigella boydii CDC 3083-94)

2e-25

168) vicR
( YP_005874489.1 )

response regulator

NC_017491
(Lactobacillus rhamnosus ATCC 8530)

2e-25

169) phoP4
( YP_003172559.1 )

two-component response regulator

NC_013198
(Lactobacillus rhamnosus GG)

2e-25

170) LRHM_2706
( YP_005867198.1 )

two-component response regulator

NC_017482
(Lactobacillus rhamnosus GG)

2e-25

171) phoP4
( YP_003175492.1 )

two-component response regulator

NC_013199
(Lactobacillus rhamnosus Lc 705)

2e-25

172) LOCK900_2803
( YP_008204397.1 )

Two-component response regulator

NC_021723
(Lactobacillus rhamnosus LOCK900)

2e-25

173) LOCK908_2894
( YP_008207357.1 )

Two-component response regulator SA14-24

NC_021725
(Lactobacillus rhamnosus LOCK908)

2e-25

174) kdpE
( YP_004951115.1 )

KDP operon transcriptional regulatory protein kdpE

NC_016514
(Enterobacter cloacae EcWSU1)

3e-25

175) ECENHK_06520
( YP_006577811.1 )

KDP operon transcriptional regulatory protein kdpE

NC_018405
(Enterobacter cloacae ENHKU01)

3e-25

176) kdpE
( YP_407074.1 )

DNA-binding transcriptional activator KdpE

NC_007613
(Shigella boydii Sb227)

3e-25

177) yycF_2
( YP_006753017.1 )

transcriptional regulatory protein YycF

NC_018641
(Lactobacillus casei W56)

3e-25

178) RPB_4649
( YP_488243.1 )

two component transcriptional regulator

NC_007778
(Rhodopseudomonas palustris HaA2)

3e-25

179) ECP_0712
( YP_668639.1 )

DNA-binding transcriptional activator KdpE

NC_008253
(Escherichia coli 536)

4e-25

180) kdpE
( YP_006104859.1 )

transcriptional regulatory protein KdpE

NC_017631
(Escherichia coli ABU 83972)

4e-25

181) kdpE
( YP_851812.1 )

DNA-binding transcriptional activator KdpE

NC_008563
(Escherichia coli APEC O1)

4e-25

182) kdpE
( NP_752709.1 )

DNA-binding transcriptional activator KdpE

NC_004431
(Escherichia coli CFT073)

4e-25

183) kdpE
( YP_006152881.1 )

DNA-binding transcriptional activator KdpE

NC_017652
(Escherichia coli clone D i14)

4e-25

184) kdpE
( YP_006147962.1 )

DNA-binding transcriptional activator KdpE

NC_017651
(Escherichia coli clone D i2)

4e-25

185) kdpE
( YP_002396710.1 )

DNA-binding transcriptional activator KdpE

NC_011745
(Escherichia coli ED1a)

4e-25

186) kdpE
( YP_002555575.1 )

KDP operon transcriptional regulatory protein kdpE

NC_011993
(Escherichia coli LF82)

4e-25

187) kdpE
( YP_006137727.1 )

DNA-binding transcriptional activator

NC_017644
(Escherichia coli NA114)

4e-25

188) NRG857_03125
( YP_006118990.1 )

DNA-binding transcriptional activator KdpE

NC_017634
(Escherichia coli NRG 857C)

4e-25

189) kdpE
( YP_002390533.1 )

DNA-binding transcriptional activator KdpE

NC_011742
(Escherichia coli S88)

4e-25

190) ECSF_0629
( YP_003348619.1 )

two-component response regulator

NC_013654
(Escherichia coli SE15)

4e-25

191) LSEI_2808
( YP_807964.1 )

DNA-binding response regulator

NC_008526
(Lactobacillus casei ATCC 334)

4e-25

192) phoP
( YP_005861064.1 )

VicR protein

NC_017474
(Lactobacillus casei BD-II)

4e-25

193) rrp3
( YP_001988921.1 )

response regulator

NC_010999
(Lactobacillus casei BL23)

4e-25

194) phoP
( YP_005857928.1 )

VicR protein

NC_017473
(Lactobacillus casei LC2W)

4e-25

195) LOCK919_3070
( YP_008201549.1 )

Two-component response regulator SA14-24

NC_021721
(Lactobacillus casei LOCK919)

4e-25

196) LCAZH_2820
( YP_003789855.1 )

OmpR family DNA-binding response regulator

NC_014334
(Lactobacillus casei Zhang)

4e-25

197) LBPG_01414
( YP_008447941.1 )

DNA-binding response regulator

NC_022112
(Lactobacillus paracasei 8700:2)

4e-25

198) vicR
( YP_005005719.1 )

response regulator

NC_016605
(Pediococcus claussenii ATCC BAA-344)

4e-25

199) kdpE
( YP_006099933.1 )

KDP operon transcriptional regulatory protein KdpE

NC_017628
(Escherichia coli IHE3034)

4e-25

200) kdpE
( YP_008570620.1 )

KDP operon transcriptional regulatory protein KdpE

NC_022370
(Escherichia coli PMV-1)

4e-25

201) UM146_14100
( YP_006111697.1 )

DNA-binding transcriptional activator KdpE

NC_017632
(Escherichia coli UM146)

4e-25

202) kdpE
( YP_539722.1 )

DNA-binding transcriptional activator KdpE

NC_007946
(Escherichia coli UTI89)

4e-25

203) kdpE
( YP_002383530.1 )

DNA-binding transcriptional activator KdpE

NC_011740
(Escherichia fergusonii ATCC 35469)

4e-25

204) kdpE
( YP_002411534.1 )

DNA-binding transcriptional activator KdpE

NC_011751
(Escherichia coli UMN026)

5e-25

205) kdpE
( YP_003233230.1 )

DNA-binding response regulator KdpE

NC_013364
(Escherichia coli 11128)

5e-25

206) kdpE
( YP_003227823.1 )

DNA-binding transcriptional activator KdpE

NC_013361
(Escherichia coli 11368)

5e-25

207) kdpE
( YP_003220685.1 )

DNA-binding response regulator KdpE in two-component regulatory system with KdpD

NC_013353
(Escherichia coli 12009)

5e-25

208) O3M_18160
( YP_006771260.1 )

DNA-binding transcriptional activator KdpE

NC_018650
(Escherichia coli 2009EL-2050)

5e-25

209) O3O_07115
( YP_006785450.1 )

DNA-binding transcriptional activator KdpE

NC_018661
(Escherichia coli 2009EL-2071)

5e-25

210) O3K_18180
( YP_006780310.1 )

DNA-binding transcriptional activator KdpE

NC_018658
(Escherichia coli 2011C-3493)

5e-25

211) APECO78_07000
( YP_007380575.1 )

DNA-binding transcriptional activator KdpE

NC_020163
(Escherichia coli APEC O78)

5e-25

212) kdpE
( YP_006142799.1 )

two component system DNA-binding response regulator

NC_017646
(Escherichia coli CE10)

5e-25

213) kdpE
( YP_002328154.1 )

DNA-binding transcriptional activator KdpE

NC_011601
(Escherichia coli E2348/69)

5e-25

214) kdpE
( YP_001461856.1 )

DNA-binding transcriptional activator KdpE

NC_009801
(Escherichia coli E24377A)

5e-25

215) kdpE
( YP_002386138.1 )

DNA-binding transcriptional activator KdpE

NC_011741
(Escherichia coli IAI1)

5e-25

216) EKO11_3185
( YP_005278833.1 )

two component transcriptional regulator, winged helix family

NC_016902
(Escherichia coli KO11FL)

5e-25

217) kdpE
( YP_006166371.1 )

DNA-binding transcriptional activator KdpE

NC_017660
(Escherichia coli KO11FL)

5e-25

218) LY180_03685
( YP_008563870.1 )

transcriptional regulator

NC_022364
(Escherichia coli LY180)

5e-25

219) ECSE_0754
( YP_002292029.1 )

DNA-binding transcriptional activator KdpE

NC_011415
(Escherichia coli SE11)

5e-25

220) kdpE
( YP_006123506.1 )

two component system DNA-binding response regulator

NC_017635
(Escherichia coli W)

5e-25

221) kdpE
( YP_006172183.1 )

DNA-binding transcriptional activator KdpE

NC_017664
(Escherichia coli W)

5e-25

222) XNR_1367
( YP_007744759.1 )

Two-component response regulator KdpE

NC_020990
(Streptomyces albus J1074)

5e-25

223) A3UG_06425
( YP_006476728.1 )

KDP operon transcriptional regulatory protein kdpE

NC_018079
(Enterobacter cloacae SDM)

6e-25

224) kdpE
( YP_006095035.1 )

two-component response regulator

NC_017626
(Escherichia coli 042)

6e-25

225) EcDH1_2942
( YP_006092862.1 )

winged helix family two component transcriptional regulator

NC_017625
(Escherichia coli DH1)

6e-25

226) kdpE
( YP_006128054.1 )

DNA-binding transcriptional activator KdpE

NC_017638
(Escherichia coli DH1)

6e-25

227) ETEC_0710
( YP_006114300.1 )

two component system DNA-binding response regulator

NC_017633
(Escherichia coli ETEC H10407)

6e-25

228) kdpE
( YP_001457492.1 )

DNA-binding transcriptional activator KdpE

NC_009800
(Escherichia coli HS)

6e-25

229) kdpE
( YP_002406679.1 )

DNA-binding transcriptional activator KdpE

NC_011750
(Escherichia coli IAI39)

6e-25

230) kdpE
( YP_001729681.1 )

DNA-binding transcriptional activator KdpE

NC_010473
(Escherichia coli K-12)

6e-25

231) kdpE
( YP_002925756.1 )

DNA-binding transcriptional activator KdpE

NC_012759
(Escherichia coli K-12)

6e-25

232) kdpE
( YP_007556239.1 )

DNA-binding response regulator in two-component regulatory system with KdpD

NC_020518
(Escherichia coli K-12)

6e-25

233) kdpE
( YP_488974.1 )

DNA-binding response regulator in two-component regulatory system with KdpD

NC_007779
(Escherichia coli K-12)

6e-25

234) kdpE
( NP_415222.1 )

DNA-binding response regulator in two-component regulatory system with KdpD

NC_000913
(Escherichia coli K12)

6e-25

235) kdpE
( YP_001742805.1 )

DNA-binding transcriptional activator KdpE

NC_010498
(Escherichia coli SMS-3-5)

6e-25

236) kdpE
( YP_006167712.1 )

KDP operon transcriptional regulatory protein kdpE

NC_017663
(Escherichia coli P12b)

7e-25

237) SSON53_03450
( YP_005455267.1 )

DNA-binding transcriptional activator KdpE

NC_016822
(Shigella sonnei 53G)

7e-25

238) kdpE
( YP_309638.1 )

DNA-binding transcriptional activator KdpE

NC_007384
(Shigella sonnei Ss046)

7e-25

239) kdpE
( YP_003353682.1 )

osmosensitive K+ channel response regulator

NC_013656
(Lactococcus lactis KF147)

7e-25

240) EGYY_06080
( YP_004710220.1 )

hypothetical protein

NC_015738
(Eggerthella sp. YY7918)

1e-24

241) kdpE
( YP_003498447.1 )

KDP operon transcriptional regulatory protein KdpE

NC_013941
(Escherichia coli CB9615)

1e-24

242) kdpE
( YP_002269320.1 )

DNA-binding transcriptional activator KdpE

NC_011353
(Escherichia coli EC4115)

1e-24

243) kdpE
( NP_286407.1 )

DNA-binding transcriptional activator KdpE

NC_002655
(Escherichia coli EDL933)

1e-24

244) ECO55CA74_04140
( YP_006157996.1 )

DNA-binding transcriptional activator KdpE

NC_017656
(Escherichia coli RM12579)

1e-24

245) ECs0722
( NP_308749.1 )

KdpE family transcriptional regulator

NC_002695
(Escherichia coli Sakai)

1e-24

246) kdpE
( YP_003076681.1 )

DNA-binding transcriptional activator KdpE

NC_013008
(Escherichia coli TW14359)

1e-24

247) CDCO157_0702
( YP_006311559.1 )

DNA-binding transcriptional activator KdpE

NC_017906
(Escherichia coli Xuzhou21)

1e-24

248) NH44784_008011
( YP_008027904.1 )

DNA-binding response regulator KdpE

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

1e-24

249) kdpE
( YP_002998488.1 )

KdpE transcriptional activator

NC_012892
(Escherichia coli BL21(DE3))

1e-24

250) kdpE
( YP_003053298.1 )

two component system DNA-binding response regulator

NC_012971
(Escherichia coli BL21(DE3))

1e-24

251) ECBD_2966
( YP_003037163.1 )

DNA-binding transcriptional activator KdpE

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

1e-24

252) kdpE
( YP_003043870.1 )

DNA-binding transcriptional activator KdpE

NC_012967
(Escherichia coli REL606)

1e-24

253) A79E_3525
( YP_006637312.1 )

DNA-binding response regulator KdpE

NC_018522
(Klebsiella pneumoniae 1084)

1e-24

254) kdpE
( YP_002239669.1 )

KDP operon transcriptional regulatory protein KdpE

NC_011283
(Klebsiella pneumoniae 342)

1e-24

255) KPHS_15460
( YP_005225846.1 )

KDP operon transcriptional regulatory protein KdpE

NC_016845
(Klebsiella pneumoniae HS11286)

1e-24

256) N559_3616
( YP_008426538.1 )

KDP operon transcriptional regulatory protein KdpE

NC_022082
(Klebsiella pneumoniae JM45)

1e-24

257) KPN2242_06400
( YP_005953763.1 )

two component transcriptional regulator, winged helix family protein

NC_017540
(Klebsiella pneumoniae KCTC 2242)

1e-24

258) kdpE
( YP_002918476.1 )

transcriptional effector for high-affinity potassium transport system

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

1e-24

259) kdpE
( YP_007992840.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

1e-24

260) kdpE
( YP_001334386.1 )

regulator of kdp operon (transcriptional effector)

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

1e-24

261) Kvar_3658
( YP_003440570.1 )

winged helix family two component transcriptional regulator

NC_013850
(Klebsiella variicola At-22)

1e-24

262) kdpE
( YP_688192.1 )

DNA-binding transcriptional activator KdpE

NC_008258
(Shigella flexneri 8401)

8e-25

263) Entcl_3123
( YP_003942653.1 )

winged helix family two component transcriptional regulator

NC_014618
(Enterobacter cloacae SCF1)

8e-25

264) ECL_03024
( YP_003613509.1 )

two component transcriptional regulator

NC_014121
(Enterobacter cloacae ATCC 13047)

9e-25

265) EcolC_2962
( YP_001725915.1 )

DNA-binding transcriptional activator KdpE

NC_010468
(Escherichia coli ATCC 8739)

9e-25

266) kdpE
( YP_003364323.1 )

two-component response regulator

NC_013716
(Citrobacter rodentium ICC168)

2e-24

267) A464_664
( YP_008321260.1 )

DNA-binding response regulator KdpE

NC_021870
(Salmonella bongori N268-08)

2e-24

268) kdpE
( YP_004729491.1 )

KDP operon transcriptional regulator

NC_015761
(Salmonella bongori NCTC 12419)

2e-24

269) kdpE
( YP_002401787.1 )

DNA-binding transcriptional activator KdpE

NC_011748
(Escherichia coli 55989)

2e-24

270) kdpE
( YP_005868541.1 )

osmosensitive K+ channel response regulator

NC_017486
(Lactococcus lactis CV56)

2e-24

271) Entas_1186
( YP_004827717.1 )

winged helix family two component transcriptional regulator

NC_015968
(Enterobacter asburiae LF7a)

4e-24

272) HN6_00029
( YP_005863171.1 )

two-component response regulator

NC_017481
(Lactobacillus salivarius CECT 5713)

4e-24

273) LSL_0035
( YP_534941.1 )

two-component response regulator

NC_007929
(Lactobacillus salivarius UCC118)

4e-24

274) kdpE
( YP_402311.1 )

DNA-binding transcriptional activator KdpE

NC_007606
(Shigella dysenteriae Sd197)

4e-24

275) L083_3150
( YP_007951140.1 )

response regulator

NC_021191
(Actinoplanes sp. N902-109)

1e-23

276) LMHCC_2858
( YP_002351803.1 )

KDP operon transcriptional regulatory protein KdpE

NC_011660
(Listeria monocytogenes HCC23)

3e-23

277) kdpE
( YP_005927733.1 )

DNA-binding response regulator

NC_017529
(Listeria monocytogenes L99)

3e-23

278) kdpE
( YP_005948851.1 )

osmosensitive K+ channel response regulator

NC_017537
(Listeria monocytogenes M7)

3e-23

279) Sdel_1461
( YP_003304514.1 )

response regulator receiver

NC_013512
(Sulfurospirillum deleyianum DSM 6946)

5e-23

280) MUO_13405
( YP_006206865.1 )

two components response regulator KdpE

NC_017728
(Listeria monocytogenes 07PF0776)

6e-23

281) kdpE
( YP_006674489.1 )

DNA-binding response regulator

NC_018584
(Listeria monocytogenes ATCC 19117)

6e-23

282) Lm4b_02651
( YP_002759336.1 )

two components response regulator KdpE

NC_012488
(Listeria monocytogenes Clip81459)

6e-23

283) kdpE
( YP_015246.1 )

DNA-binding response regulator KdpE

NC_002973
(Listeria monocytogenes F2365)

6e-23

284) LM220_02902
( YP_008290911.1 )

XRE family transcriptional regulator

NC_021830
(Listeria monocytogenes J1-220)

6e-23

285) M640_12785
( YP_008303039.1 )

XRE family transcriptional regulator

NC_021839
(Listeria monocytogenes J1776)

6e-23

286) LM1816_02417
( YP_008286879.1 )

XRE family transcriptional regulator

NC_021829
(Listeria monocytogenes J1816)

6e-23

287) M644_02135
( YP_008283083.1 )

XRE family transcriptional regulator

NC_021827
(Listeria monocytogenes J1817)

6e-23

288) M645_10175
( YP_008305436.1 )

XRE family transcriptional regulator

NC_021840
(Listeria monocytogenes J1926)

6e-23

289) M637_01630
( YP_008274139.1 )

XRE family transcriptional regulator

NC_021824
(Listeria monocytogenes J2-064)

6e-23

290) M638_01770
( YP_008277040.1 )

XRE family transcriptional regulator

NC_021825
(Listeria monocytogenes J2-1091)

6e-23

291) kdpE
( YP_006755773.1 )

DNA-binding response regulator

NC_018642
(Listeria monocytogenes L312)

6e-23

292) M643_08970
( YP_008281320.1 )

XRE family transcriptional regulator

NC_021826
(Listeria monocytogenes N1-011A)

6e-23

293) M641_02380
( YP_008298020.1 )

XRE family transcriptional regulator

NC_021838
(Listeria monocytogenes R2-502)

6e-23

294) kdpE
( YP_006677356.1 )

DNA-binding response regulator

NC_018585
(Listeria monocytogenes SLCC2378)

6e-23

295) kdpE
( YP_006694650.1 )

DNA-binding response regulator

NC_018591
(Listeria monocytogenes SLCC2482)

6e-23

296) kdpE
( YP_006680262.1 )

DNA-binding response regulator

NC_018586
(Listeria monocytogenes SLCC2540)

6e-23

297) kdpE
( YP_006683148.1 )

DNA-binding response regulator

NC_018587
(Listeria monocytogenes SLCC2755)

6e-23

298) kdpE
( YP_007016209.1 )

KDP operon transcriptional regulatory protein KdpE

NC_019556
(Listeria monocytogenes LL195)

8e-23

299) lin2826
( NP_472154.1 )

hypothetical protein

NC_003212
(Listeria innocua Clip11262)

1e-22

300) FBFL15_2462
( YP_004844704.1 )

two component system response regulatory protein

NC_016001
(Flavobacterium branchiophilum FL-15)

3e-22

301) kdpE
( YP_006691772.1 )

DNA-binding response regulator

NC_018590
(Listeria monocytogenes SLCC2376)

4e-22

302) Dd586_1170
( YP_003332759.1 )

winged helix family two component transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

8e-22

303) Ser39006_1854
( YP_008522236.1 )

two component transcriptional regulator, winged helix family

NC_022268
(Serratia sp. ATCC 39006)

1e-21

304) kdpE
( YP_003882094.1 )

two component system DNA-binding response regulator

NC_014500
(Dickeya dadantii 3937)

2e-21

305) Pat9b_1098
( YP_004114976.1 )

winged helix family two component transcriptional regulator

NC_014837
(Pantoea sp. At-9b)

4e-21

306) Mesau_02104
( YP_007303920.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019973
(Mesorhizobium australicum WSM2073)

2e-20

307) Mesci_2068
( YP_004141270.1 )

response regulator receiver

NC_014923
(Mesorhizobium ciceri WSM1271)

2e-20

308) mll2816
( NP_104064.1 )

two-component transcriptional regulator

NC_002678
(Mesorhizobium loti MAFF303099)

2e-20

309) Mesop_2183
( YP_004610753.1 )

winged helix family two component transcriptional regulator

NC_015675
(Mesorhizobium opportunistum WSM2075)

2e-20

310) kdpE
( YP_001611994.1 )

two component system transcriptional regulatory protein

NC_010162
(Sorangium cellulosum So ce 56)

3e-20

311) UMNK88_731
( YP_006132529.1 )

transcriptional regulatory protein KdpE

NC_017641
(Escherichia coli UMNK88)

1e-19

312) SARI_02239
( YP_001571253.1 )

DNA-binding transcriptional activator KdpE

NC_010067
(Salmonella enterica RSK2980)

2e-19

313) kdpE
( YP_003467002.1 )

response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family)

NC_013892
(Xenorhabdus bovienii SS-2004)

7e-19

314) Dd703_1126
( YP_002986753.1 )

DNA-binding transcriptional activator KdpE

NC_012880
(Dickeya dadantii Ech703)

2e-18

315) SCE1572_09230
( YP_008148295.1 )

chemotaxis protein CheY

NC_021658
(Sorangium cellulosum So0157-2)

2e-18

316) kdpE
( YP_008137311.1 )

KDp operon transcriptional regulatory protein KdpE

NC_021591
(Serratia odorifera 4Rx13)

3e-18

317) SerAS9_1217
( YP_004504618.1 )

winged helix family two component transcriptional regulator

NC_015567
(Serratia plymuthica AS9)

3e-18

318) M621_06260
( YP_008158077.1 )

transcriptional regulator

NC_021659
(Serratia plymuthica S13)

3e-18

319) SerAS12_1217
( YP_004499666.1 )

winged helix family two component transcriptional regulator

NC_015566
(Serratia sp. AS12)

3e-18

320) SerAS13_1217
( YP_006024080.1 )

winged helix family two component transcriptional regulator

NC_017573
(Serratia sp. AS13)

3e-18

321) Dd1591_2931
( YP_003005232.1 )

DNA-binding transcriptional activator KdpE

NC_012912
(Dickeya zeae Ech1591)

4e-18

322) Spro_1244
( YP_001477476.1 )

DNA-binding transcriptional activator KdpE

NC_009832
(Serratia proteamaculans 568)

7e-18

323) kdpE
( YP_049444.1 )

DNA-binding transcriptional activator KdpE

NC_004547
(Pectobacterium atrosepticum SCRI1043)

8e-18

324) PCC21_012450
( YP_006645901.1 )

DNA-binding transcriptional activator KdpE

NC_018525
(Pectobacterium carotovorum PCC21)

9e-18

325) PC1_1214
( YP_003016798.1 )

winged helix family two component transcriptional regulator

NC_012917
(Pectobacterium carotovorum PC1)

1e-17

326) M495_05590
( YP_008229078.1 )

transcriptional regulator

NC_021741
(Serratia liquefaciens ATCC 27592)

2e-17

327) kdpE
( NP_928714.1 )

DNA-binding transcriptional activator KdpE

NC_005126
(Photorhabdus luminescens TTO1)

2e-17

328) NT01EI_2892
( YP_002934288.1 )

transcriptional regulatory protein KdpE, putative

NC_012779
(Edwardsiella ictaluri 93-146)

4e-12

• Sequence Alignments

1) kdpE in NC_017340


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  342 bits (1283),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)

Query  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQpdiilldlglpdid  60
            MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glsliQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120
            GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180
            RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231
            LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

2) CA347_68 in NC_021554


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  342 bits (1283),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)

Query  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQpdiilldlglpdid  60
            MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glsliQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120
            GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180
            RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231
            LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

3) SaurJH1_0059 in NC_009632


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  342 bits (1283),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)

Query  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQpdiilldlglpdid  60
            MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glsliQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120
            GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180
            RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231
            LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

4) SaurJH9_0057 in NC_009487


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  342 bits (1283),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)

Query  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQpdiilldlglpdid  60
            MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glsliQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120
            GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180
            RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231
            LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

5) kdpE in NC_002952


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  342 bits (1283),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)

Query  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQpdiilldlglpdid  60
            MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glsliQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120
            GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180
            RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231
            LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

6) kdpE in NC_009782


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  342 bits (1283),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)

Query  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQpdiilldlglpdid  60
            MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glsliQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120
            GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180
            RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231
            LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

7) kdpE in NC_002758


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  342 bits (1283),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)

Query  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQpdiilldlglpdid  60
            MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glsliQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120
            GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180
            RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231
            LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

8) kdpE in NC_002745


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  342 bits (1283),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)

Query  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQpdiilldlglpdid  60
            MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glsliQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120
            GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180
            RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231
            LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

9) kdeP in NC_002976


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  342 bits (1283),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)

Query  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQpdiilldlglpdid  60
            MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glsliQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120
            GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180
            RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231
            LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

10) SH0031 in NC_007168


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  339 bits (1271),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 229/231 (99%), Positives = 229/231 (99%), Gaps = 0/231 (0%)

Query  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQpdiilldlglpdid  60
            MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glsliQQFRDFVDTPIIVISARTEEQTIVEALDRGANDYMTKPFNIDELRARIRVALRMS  120
            GLSLIQQFRDFVDTPIIVISARTEEQTIVE LDRGANDYMTKPFNIDELRARIRVALRMS
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILSHHVGKVLTYQVLLKS  180
            RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTIL HHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231
            LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

11) kdpE(SCCmec) in NC_017353


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  279 bits (1044),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 176/231 (77%), Positives = 210/231 (91%), Gaps = 1/231 (0%)

Query  2    MKSTLLVVEDDAAILHLIDVTLTMNYYKVITARNGKDAAFRIRTEHpdvilldlglpdid  61
            MK+TLLVVEDD AILHLIDV+LTMNYYKV+TA+ GK+A FR+RTE+PD+ILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  62   gFTLIKQIRTDIDTPIIVISARTEEQTIVNALDCGANDYMIKPFNVDELQARIRVALRVS  121
            G++LI+Q+R  +DTPIIVISARTEEQTIV+ LD GANDYM KPFN+DEL+ARIRVALR+S
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  KKTTTEENNFKNGPLTVDFNAKMVYINDQPIHLTPNEFQLLKILSHHVGKVLTYQVLLKS  181
            + T T ++ F NGPLT+DF+AK V +N+Q++HLTPNEFQLL IL HHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  182  IFGYVNKCEMASLRVHMASLRKKLNYSEDDAHMDKKLIITHPRIGYQMQHL  232
            ++GYVN  EMA+LRVHMASLRKKLNY++ D++ +KKLIITHPRIGYQMQHL
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQ-DPNTEKKLIITHPRIGYQMQHL  230

12) SLGD_00056 in NC_013893


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  279 bits (1045),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 176/231 (77%), Positives = 210/231 (91%), Gaps = 1/231 (0%)

Query  1    MKSTLLVVEDDAAILHLIDVTLTMNYYKVITARNGKDAAFRIRTEHpdvilldlglpdid  60
            MK+TLLVVEDD AILHLIDV+LTMNYYKV+TA+ GK+A FR+RTE+PD+ILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   gFTLIKQIRTDIDTPIIVISARTEEQTIVNALDCGANDYMIKPFNVDELQARIRVALRVS  120
            G++LI+Q+R  +DTPIIVISARTEEQTIV+ LD GANDYM KPFN+DEL+ARIRVALR+S
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KKTTTEENNFKNGPLTVDFNAKMVYINDQPIHLTPNEFQLLKILSHHVGKVLTYQVLLKS  180
            + T T ++ F NGPLT+DF+AK V +N+Q++HLTPNEFQLL IL HHVGKVLTYQVLLKS
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IFGYVNKCEMASLRVHMASLRKKLNYSEDDAHMDKKLIITHPRIGYQMQHL  231
            ++GYVN  EMA+LRVHMASLRKKLNY++ D++ +KKLIITHPRIGYQMQHL
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQ-DPNTEKKLIITHPRIGYQMQHL  230

13) kdpE in NC_022222


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  229 bits (852),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 141/227 (63%), Positives = 189/227 (84%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLIDVALTLDYYNVTTAKNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HLIDVALT++YY+V TAK + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

14) M013TW_2038 in NC_016928


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  227 bits (846),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 140/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLIDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HLIDVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHDDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

15) kdpE in NC_022443


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  227 bits (846),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 140/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLIDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HLIDVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHDDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

16) kdpE in NC_022442


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  227 bits (846),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 140/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLIDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HLIDVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHDDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

17) kdpE in NC_017340


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

18) MS7_2096 in NC_017351


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

19) SAAG_02293 in NC_022113


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

20) kpdE in NC_021670


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

21) CA347_2160 in NC_021554


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

22) SAKOR_02045 in NC_022226


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

23) kdpE in NC_002951


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

24) ECTR2_1935 in NC_017343


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

25) kdpE in NC_013450


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

26) kdpE in NC_017763


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

27) SaurJH1_2154 in NC_009632


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

28) SaurJH9_2116 in NC_009487


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

29) kdpE in NC_017341


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

30) kdpE in NC_017338


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

31) kdpE in NC_017349


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

32) BN843_21170 in NC_021059


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

33) kdpE in NC_002952


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

34) SAS1984 in NC_002953


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

35) kdpE in NC_009782


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

36) kdpE in NC_002758


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

37) kdpE in NC_003923


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

38) kdpE in NC_002745


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

39) SAOUHSC_02315 in NC_007795


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

40) kdpE in NC_009641


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

41) kdpE in NC_007622


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

42) kdpE in NC_020529


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

43) kdpE in NC_020564


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

44) kdpE in NC_020532


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

45) kdpE in NC_020533


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

46) kdpE in NC_020537


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

47) SAT0131_02238 in NC_017347


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

48) kdpE in NC_017342


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

49) kdpE in NC_017331


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

50) kdpE in NC_020566


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

51) kdpE in NC_020536


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

52) kdpE in NC_020568


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

53) kdpE in NC_007793


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

54) kdpE in NC_010079


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

55) SAVC_09280 in NC_016912


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

56) kdpE in NC_018608


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  224 bits (835),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNFVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

57) ST398NM01_2121 in NC_017673


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  224 bits (835),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNFVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

58) SAPIG2121 in NC_017333


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  224 bits (835),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 139/227 (62%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNFVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N+Q VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

59) SAOV_2121 in NC_017337


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  224 bits (834),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 138/227 (61%), Positives = 188/227 (83%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYNVTTAENATQAHFKIQIDKPDVIlldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY+V TA  + +A+F+++ ++PD+ILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glclISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSHQETNIVFTNGLLSIDFGSKSVVINNHEVHLTPNEFSLLELLANHKGKVLTYEMILKR  180
            +S +  +  FTNG L+IDF++KSV++N++ VHLTPNEF LL +L +H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHEDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q  +  K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

60) kdpE in NC_017568


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  222 bits (826),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 143/231 (62%), Positives = 188/231 (82%), Gaps = 2/231 (0%)

Query  1    MNTKILVVEDDAAITHLLDVSLTLDYYEVITATNGKDADFQIRSKApdiilldlglpdid  60
            M+T +LVVEDD AI HL+DV+LT++YY V+TA  GK+ADF++R+  PDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   gleliKRIRQTFDIPIIVISARLDEQTIVEALDNGANDYMTKPFNVDELRARIRVVQRLE  120
            GL LI+++R+  D PIIVISAR +EQTIVE LD GANDYMTKPFN+DELRARIRV  R+ 
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  NMQNQKEIVFENGPLVVSYQAKTAQIDNQLLNLTPHEFALLELLCRHVGKVLTYDTILKA  180
               +  +  F NGPL + ++AK+  +++Q ++LTP+EF LL +LC+HVGKVLTY+ +LK+
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNQSEMPSLRVHMTSLRNKL--TQAHPESKQLIITRPRIGYQMQYWQ  229
            +YGYVN++EM++LRVHM+SLR+KL  TQ     K+LIIT+PRIGYQMQ  +
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

61) SPSINT_0109 in NC_014925


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  222 bits (826),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 143/231 (62%), Positives = 188/231 (82%), Gaps = 2/231 (0%)

Query  1    MNTKILVVEDDAAITHLLDVSLTLDYYEVITATNGKDADFQIRSKApdiilldlglpdid  60
            M+T +LVVEDD AI HL+DV+LT++YY V+TA  GK+ADF++R+  PDIILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   gleliKRIRQTFDIPIIVISARLDEQTIVEALDNGANDYMTKPFNVDELRARIRVVQRLE  120
            GL LI+++R+  D PIIVISAR +EQTIVE LD GANDYMTKPFN+DELRARIRV  R+ 
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  NMQNQKEIVFENGPLVVSYQAKTAQIDNQLLNLTPHEFALLELLCRHVGKVLTYDTILKA  180
               +  +  F NGPL + ++AK+  +++Q ++LTP+EF LL +LC+HVGKVLTY+ +LK+
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNQSEMPSLRVHMTSLRNKL--TQAHPESKQLIITRPRIGYQMQYWQ  229
            +YGYVN++EM++LRVHM+SLR+KL  TQ     K+LIIT+PRIGYQMQ  +
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

62) SAMSHR1132_19040 in NC_016941


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  217 bits (807),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 141/227 (63%), Positives = 183/227 (81%), Gaps = 2/227 (0%)

Query  1    MQSKILIIEDDHAITHLLDVALTLDYYTVTTAENATSAHFKIQIdkpdiilldlglpdkd  60
            M++ +L++EDD+AI HL+DVALT++YY V TA  +  A+F+++ ++PDIILLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glCLITEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIA  120
            GL LI ++R+  D PIIVISAR EEQTI++ LD GANDYMTKPFN+DELRARIRV  R++
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KSNQETNIIFTNGLLVIDFDSKSVIINNQEVHLTPNEFSLLELLSKHKGKVLTYEMILKR  180
            +S +  +  FTNG L IDFD+KSV++N+Q VHLTPNEF LL +L  H GKVLTY+++LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  IYGYVNKTEMPSLRVHMTSLRQKL--SQCHTDAKDIIKTHPRIGYQM  225
            +YGYVN TEM++LRVHM+SLR+KL  +Q     K +I THPRIGYQM
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

63) kdpE in NC_008261


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  169 bits (626),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 101/235 (43%), Positives = 166/235 (71%), Gaps = 8/235 (3%)

Query  1    MKPAILVIEDEKAIRNFVTATLEINSYKCHTAFNGSQGMILAISKRPDIIILDLGLPDMD  60
            MK ++LV+ED+ AI +++  +L +N YK  TA  G ++ +   + +PDII+LDLGLPD+D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GIEIIKKVREWSNCPIIVVSARSEDRDKIEALDLGADDYLTKPFSVDELMARIRVAIRKM  120
            G+ +I++ R+  + PIIV+SAR+E++  +E LD GA+DY+TKPF++DEL ARIRVA+R  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM-  119

Query  121  NYDRNNTQEIQE-FVNGDLKIDYTSGCVFLNEEEIHLTPIEYKLLCLLSKNVGRVLTHNY  179
                 +T+ IQ  F NG L ID+ +  V++NE+ +HLTP E++LL +L  +VG+VLT + 
Sbjct  120  ---SRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQV  176

Query  180  ILKEIWSSTCESDIPSLRVFMATLRKKLS---KKAMDTNYIQTHIGVGYRLLRIQ  231
            +LK + +   ++++++LRV MA+LRKKL+       + + I TH  +GY++ +++
Sbjct  177  LLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

64) kdpE in NC_017542


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 104/235 (45%), Positives = 164/235 (70%), Gaps = 10/235 (4%)

Query  3    KPFILVVEDDKPIRKLITTTLETQGYKYHTAETGEASILEAVSRQPDLMILDLGLPDMDG  62
            K  +LVVEDD +I  LI  +L  + YK  TA TG  + +   + QPD+++LDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VDIIKKLREWSNMPIIVVSARSEDRDKIDALDAGADDYLTKPFSVEELLARLRVSLRRIR  122
            + +I+++R+  + PIIV+SAR+E++  ++ LD GA+DY+TKPF+++EL AR+RV+LR  R
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  VNGDKILKDASSFINGNLKIDYAAGCVWIGEKEIHLTPSEYKLLCLLAKHVGKVLTHNFI  182
             + + I    S F NG L ID+ A  V + E+ +HLTP+E++LL +L  HVGKVLT + +
Sbjct  122  -STETI---QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  LHEIWG--SHSYDIPALRVFMATLRKKI---EKTSSQPKFIQTHIGVGYRMLQVG  232
            L  + G  +H+ +++ALRV MA+LRKK+   +  +++ K+I TH  +GY+M ++ 
Sbjct  178  LKSLYGYVNHT-EMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

65) PPSC2_c2602 in NC_014622


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 104/235 (45%), Positives = 164/235 (70%), Gaps = 10/235 (4%)

Query  3    KPFILVVEDDKPIRKLITTTLETQGYKYHTAETGEASILEAVSRQPDLMILDLGLPDMDG  62
            K  +LVVEDD +I  LI  +L  + YK  TA TG  + +   + QPD+++LDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VDIIKKLREWSNMPIIVVSARSEDRDKIDALDAGADDYLTKPFSVEELLARLRVSLRRIR  122
            + +I+++R+  + PIIV+SAR+E++  ++ LD GA+DY+TKPF+++EL AR+RV+LR  R
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  VNGDKILKDASSFINGNLKIDYAAGCVWIGEKEIHLTPSEYKLLCLLAKHVGKVLTHNFI  182
             + + I    S F NG L ID+ A  V + E+ +HLTP+E++LL +L  HVGKVLT + +
Sbjct  122  -STETI---QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  LHEIWG--SHSYDIPALRVFMATLRKKI---EKTSSQPKFIQTHIGVGYRMLQVG  232
            L  + G  +H+ +++ALRV MA+LRKK+   +  +++ K+I TH  +GY+M ++ 
Sbjct  178  LKSLYGYVNHT-EMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

66) CLL_A0982 in NC_010674


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 101/231 (44%), Positives = 158/231 (69%), Gaps = 9/231 (3%)

Query  3    KPQILVVEDDKAVRNLITITLETENYKYHVAENG-EAAIREAVSYVPDIVILDLGLPDMD  61
            K  +LVVEDD A+ +LI ++L  + YK   A  G EA +R      PDI++LDLGLPD+D
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDID  60

Query  62   GIEIIKRIRTWSNVPIIVVSARSEDRDKIEALDCGADDYLTKPFSVEELLARLRVSLRRI  121
            G+ +I+++R   + PIIV+SAR+E++  +E LD GA+DY+TKPF+++EL AR+RV+LR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  NYVNSGQGKNSNLFINGDLKIDYAARCVFIKDEEVHLTPIEYRLICLLAKNVGRVLTHNF  181
               ++ Q++    F NG L ID+ A+ V+++++ VHLTP E++L+ +L  +VG+VLT + 
Sbjct  121  RSTETIQSR----FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQV  176

Query  182  ILKEVWGNTLPNDTPSLRVFMATLRKKI---EEKPSKPKYIQTHIGIGYRM  229
            +LK + G     + ++LRV MA+LRKK+   ++  +  K I TH  IGY+M
Sbjct  177  LLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

67) RTO_16110 in NC_021015


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  162 bits (600),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 100/234 (43%), Positives = 163/234 (70%), Gaps = 7/234 (2%)

Query  3    KSLILVVEDDTSVRNLITTTLKTHEYRYLTAPDGQSAILETSSHNPDIVLLDLGLPDIDG  62
            K+ +LVVEDD ++ +LI  +L  + Y+ +TA  G+ A +   +++PDI+LLDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VEIIKKIRTWSNMPIIVISARSEDTDKIDALDAGADDYLTKPFSVEELLARLRVTQRRLS  122
            + +I+++R   + PIIVISAR+E+   ++ LD GA+DY+TKPF+++EL AR+RV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  123  MMQKVSPAEAVVFVNGKLRVDYAAGCAYLNEEELHLTPIEYKLLCLLTRNIGKVLTHTFL  182
             M + + +    F NG L +D+ A    +NE+ +HLTP E++LL +L +++GKVLT   L
Sbjct  119  -MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  TQSIWGSSWNNDIASLRVFMATLRKKIE--KEPNSP-QYIQTHIGVGYRMLKVD  233
             +S+ G   + ++A+LRV MA+LRKK++  ++PN+  + I TH  +GY+M  ++
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

68) CL2_04920 in NC_021016


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  161 bits (594),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 105/230 (46%), Positives = 156/230 (68%), Gaps = 7/230 (3%)

Query  3    KALILVVEDDRPIRNLIVTTLKTHDYKYITAENGSSAILEASSHKPEIILLDLGLPDMEG  62
            K+ +LVVEDD +I +LI  +L  + YK +TA  G  A +   +++P+IILLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VDVIKKVRTWSNVPIIVISARSEDVDKIEALDAGADDYITKPFSVDELLARIRVTQRRLA  122
            + +I++ R   + PIIVISAR+E+   +E LD GA+DY+TKPF++DEL ARIRV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  123  LIQSGEEQEQAVFVNGELKIDYTAGSTYLKDKELHLTPIEYKLLCLLSHNVGKVLTHTYI  182
             +  + E  Q+ F NG L ID+ A S  ++++ +HLTP E++LL +L H+VGKVLT   +
Sbjct  119  -MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  TQQIWGSSLENDVASLRVFMATLRKKL---QPDKDGMQYIQTHIGIGYRM  229
             + + G   + ++A+LRV MA+LRKKL   Q  +   + I TH  IGY+M
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

69) CC1_26620 in NC_021009


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  161 bits (593),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 101/234 (44%), Positives = 157/234 (68%), Gaps = 7/234 (2%)

Query  3    KPLVLVVEDDTPVRNLITTTLKTHEYRYLSAQNGASAVLEALSHNPDIVLLDLGLPDMDG  62
            K  +LVVEDD ++ +LI  +L  + Y+ ++A+ G  A +   +++PDI+LLDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VEIIRKIRSWSNMPIIVISARTEDSDKIGALDAGADDYLTKPFSVDELLARLRVTQRRLA  122
            + +I+++R   + PIIVISARTE+   +  LD GA+DY+TKPF++DEL AR+RV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  123  LMKADTAQETPIFTNGALKIDYAAGCAYIDGAELHLTPIEYKLLCLLSKNVGKVLTHTYI  182
             M   T    + FTNG+L ID+ A    ++   +HLTP E++LL +L  +VGKVLT   +
Sbjct  119  -MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  TQQIWGSSWENDIASLRVFMATLRKKL---ENGKDGQQYIQTHIGIGYRMLRVE  233
             + + G   + ++A+LRV MA+LRKKL   ++ +  ++ I TH  IGY+M ++E
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

70) CLH_0919 in NC_010723


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  160 bits (592),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 99/231 (43%), Positives = 156/231 (68%), Gaps = 9/231 (3%)

Query  3    KPQILVVEDDKAVRNLITITLETENYKYHVAENG-EAAIREAVSYVPDIVILDLGLPDMD  61
            K  +LVVEDD A+ +LI ++L  + YK   A  G EA +R      PDI++LDLGLPD+D
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDID  60

Query  62   GIEIIKKIRTWSNIPIIVVSARSEDRDKIEALDCGADDYLTKPFSVEELLARLRVSLRRI  121
            G+ +I+++R   + PIIV+SAR+E++  +E LD GA+DY+TKPF+++EL AR+RV+LR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  NYVNGGQGENSNLFINGDLKLDYAARCVFIKDEEIHLTPIEYRLICLLAKNVGRVLTHNF  181
               +  Q+     F NG L +D+ A+ V+++++ +HLTP E++L+ +L  +VG+VLT + 
Sbjct  121  RSTETIQSR----FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQV  176

Query  182  ILKEVWGNTLPNDTPSLRVFMATLRKKI---EEKPSKPKYIQTHIGIGYRM  229
            +LK + G     + ++LRV MA+LRKK+   ++  +  K I TH  IGY+M
Sbjct  177  LLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

71) pli0051 in NC_003383


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  158 bits (585),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 101/235 (43%), Positives = 163/235 (70%), Gaps = 9/235 (3%)

Query  3    KNASILVVEDDKAIRKLITTTLETRNYNFYTADTGNAALIQVTSRQPDIIILDLGLPDMD  62
             ++++LVVEDD AI  LI  +L    Y+  TA TG+ A +++ + QPDII+LDLGLPD+D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  63   GTTIIQRVREWSQVPIIVVSARSEDSDKIVALDMGADDFLTKPFSVEELLARIRVSLRRR  122
            G ++IQ+ R+  + PIIV+SAR+E+   +  LD GA+D++TKPF+++EL ARIRV+LR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  123  AYTNSELSTQNVFINGDLKINYTLRAVYLAEIEIHLTPIEYKLVSLLAKNVGRVLTHNYI  182
              T+   + Q+ F NG L I++  ++V + E  +HLTP E++L+++L  +VG+VLT + +
Sbjct  121  RSTE---TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  THQIWGDYSN--DIPALRVFMANLRKKI---EKKSAQQRYIQTHVGIGYRMLQVS  232
               + G Y N  +++ALRV MA+LRKK+   +  +++++ I TH  IGY+M ++ 
Sbjct  178  LKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

72) kdpE in NC_019425


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  158 bits (582),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 101/228 (45%), Positives = 159/228 (70%), Gaps = 6/228 (2%)

Query  5    TVLVIEDDPAISNFMTAILTGNDYKVLTADTGKLGISMCATWSPDVVILDLGLPDIDGIE  64
            T+LV+EDD AI +++   LT N YKV+TA TGK +     T  PD+++LDLGLPDIDG+ 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  65   VLQTIRGWSEIPILIVSARGNEVEKVSALDEGADDYITKPFGTSELLARIRTALRHSTKK  124
            ++Q +R+  + PI+++SAR +E   V  LD GA+DY+TKPF   EL ARIR ALR S   
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  125  DSENSQLINGELTIDFEKRQVEIAGEKIHLTPNEYKIIQLLAINIGKVLTHDFISKHVWG  184
            ++ +S++ NG LTIDF+ + V +  + +HLTPNE++++ +L  ++GKVLT + + K + G
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  185  PYVSENQ--ALRVNMSNIRRKIEVNP---AEPHFILTEIGIGYRMVEL  227
             YV++ +  ALRV+M+++R+K++      +E  +I+T+  IGY+M +L
Sbjct  184  -YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHL  230

73) kdpE in NC_015600


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  158 bits (583),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 100/234 (43%), Positives = 160/234 (69%), Gaps = 7/234 (2%)

Query  3    KTLVLLVEDDSSVRNLMTTTLKAHGYRYLTAPNGDAAILEASSHNPDIVLLDLGLPDMDG  62
            KT +L+VEDD ++ +L+  +L  + Y+ +TA  G  A +   +++PDI+LLDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VEVIKKIRSWSSMPIIVISARSEDTDKIDALDAGADDYLTKPFSVEELLARLRVTQRRLT  122
            + +I+++R     PIIVISAR+E+   ++ LD GA+DY+TKPF+++EL AR+RV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  123  MMQRFSPTEASVFINGELRIDYAAGCAYINSEELHLTPIEYKLLCLLSKNTGKVLTHTYI  182
             M R + T  S F NG L ID+ A    +N + +HLTP E++LL +L  + GKVLT   +
Sbjct  119  -MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  TQNIWGSNWDNDIASLRVFMATLRKKIE--KEPNSP-QYIQTHIGVGYRMLRVE  233
             +++ G   + ++A+LRV MA+LRKK++  ++PN+  + I TH  +GY+M ++E
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

74) kdpE in NC_009706


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 104/231 (46%), Positives = 156/231 (68%), Gaps = 10/231 (4%)

Query  3    KPLILVVEDDKAIRKLITTTLETQGYRYHTAETGGASILEAVSRQPDIIILDLGLPDMDG  62
            K  +LVVEDD AI  LI  +L  + Y+  TA TG  + +   + QPDII+LDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VEIIKKVRTWSNVPIIVVSARSEDRDKIDSLDAGADDYLTKPFSVEELLARLRVSLRRIR  122
            + +I++ R   + PIIV+SAR+E++  ++ LD GA+DY+TKPF+++EL AR+RV+LR  R
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  YDSKKLLKDAAIFINSGLKIDYEAGCVWLDGDEVHLTPIEYKLICLLAKNVGKVLTHNFI  182
                      + F N+ L ID++A  V ++ + VHLTP E++L+ +L  +VGKVLT + +
Sbjct  122  STETI----QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  LHEIWGNYSN--DISALRVFMATLRKKIE--KEPSKP-KYIQTHIGIGYRM  228
            L  + G Y N  +++ALRV MA+LRKK++  ++P+   K I TH  IGY+M
Sbjct  178  LKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

75) kdpE in NC_010382


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  155 bits (573),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 108/230 (47%), Positives = 163/230 (71%), Gaps = 6/230 (2%)

Query  1    MNKRILVVEDDVAIANLIKMTLATQHYEFDIAQDGNSALQKAITMKPDVYILDLGLPDID  60
            M+  +LVVEDD AI +LI ++L+ + Y    A+ G+ A  +  T +PD+ +LDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GVELITKIRSWTQTPIIVVSARGEEYDKINALDAGADDYVTKPFSVEEllarirvalrra  120
            G+ LI ++R   +TPIIV+SAR EE   ++ LD GA+DY+TKPF+++EL ARIRVALR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  aYEYPPEQENATFTNGYLQINYVDQTVLVNGKEIHVTPIEYKLLVVLSKHVGKVLTHNFI  180
                + E  ++ FTNG L I++  ++VLVN + +H+TP E++LL +L  HVGKVLT + +
Sbjct  121  R---STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  181  LKEIWHNALQSDIPSLRVFMATLRKKI---EDDPAQPKLIQTHVRVGYRM  227
            LK +     ++++++LRV MA+LRKK+   +D  ++ KLI TH R+GY+M
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

76) CKR_1365 in NC_011837


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  155 bits (571),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 103/228 (46%), Positives = 155/228 (68%), Gaps = 10/228 (4%)

Query  2    ILVVEDDKAIRKLITTTLETQGYRYHTAETGGASILEAVSRQPDIIILDLGLPDMDGVEI  61
            +LVVEDD AI  LI  +L  + Y+  TA TG  + +   + QPDII+LDLGLPD+DG+ +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  62   IKKVRTWSNVPIIVVSARSEDRDKIDSLDAGADDYLTKPFSVEELLARLRVSLRRIRYDS  121
            I++ R   + PIIV+SAR+E++  ++ LD GA+DY+TKPF+++EL AR+RV+LR  R   
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  122  KKLLKDAAIFINSGLKIDYEAGCVWLDGDEVHLTPIEYKLICLLAKNVGKVLTHNFILHE  181
                   + F N+ L ID++A  V ++ + VHLTP E++L+ +L  +VGKVLT + +L  
Sbjct  125  TI----QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  182  IWGNYSN--DISALRVFMATLRKKIE--KEPSKP-KYIQTHIGIGYRM  224
            + G Y N  +++ALRV MA+LRKK++  ++P+   K I TH  IGY+M
Sbjct  181  LYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

77) CK5_13800 in NC_021022


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  155 bits (571),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 102/234 (44%), Positives = 157/234 (68%), Gaps = 7/234 (2%)

Query  3    KNSILVVEDDRPIRNLIITALKTHDYKYLEAENGTSAILEASSHNPDIVLLDLGLPDIEG  62
            K ++LVVEDD +I +LI  AL  + YK + A  G  A +   +++PDI+LLDLGLPDI+G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VEVIKKIRMWSNMPIIVISARNEDMDKIEALDAGADDYITKPFSVEELLARIRVTQRRLA  122
            + +I+++R   + PIIVISAR E+   +E LD GA+DY+TKPF+++EL ARIRV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  123  LIQTGEMQEESIFTNGELKIDYTAGCTYLRGEELHLTPIEYKLLCLLSRNVGKVLTHTFI  182
            + ++ E  +   FTNG L ID+ A    +  + +HLTP E++LL +L ++VGKVLT   +
Sbjct  119  MSRSTETIQSR-FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  TQQIWRRSSENDVASLRVFMATLRKKL---ETEKSDVSYIQTHVGIGYRMLRIE  233
             + +    ++ ++A+LRV MA+LRKKL   +  +++   I TH  IGY+M ++E
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

78) kdpE in NC_009089


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  154 bits (567),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 100/232 (44%), Positives = 158/232 (69%), Gaps = 7/232 (3%)

Query  3    KKLILLVEDDKTIRKFISTALLTQDYDVKEAITGKEGISIAVSYSPDVVLLDLGLEDMDG  62
            K  +L+VEDD +I  +I  AL  + Y V  A TGKE+     +  PD++LLDLGL D+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   IEVIKAIRQFSNIPIIVVSAREQDRDKVEVFDAGADDYLTKPFSIVELLARVRVAFRHSQ  122
            + +I+ +R+F + PIIV+SAR +++  VEV+D GA+DY+TKPF+I EL AR+RVA+R S 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS-  120

Query  123  VEAQQKDDVKSTFEVDKLLIDFDKRKVIVDDVEVHLTPIEYNILSLLAKHHGKVLTHNFI  182
               +  + ++S F  + L IDFD + V+V++  VHLTP E+++L++L  H GKVLT + +
Sbjct  121  ---RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  IKEIWGSVIGNETKSLRVFMATLRRKI---EKQPANPRYIITEVGVGYRLND  231
            +K + G V   E  +LRV MA+LR+K+   +   ++ + IIT+  +GY++++
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

79) CDBI1_09045 in NC_017179


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  154 bits (567),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 100/232 (44%), Positives = 158/232 (69%), Gaps = 7/232 (3%)

Query  3    KKLILLVEDDKTIRKFISTALLTQDYDVKEAITGKEGISIAVSYSPDVVLLDLGLEDMDG  62
            K  +L+VEDD +I  +I  AL  + Y V  A TGKE+     +  PD++LLDLGL D+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   IEVIKAIRQFSNIPIIVVSAREQDRDKVEVFDAGADDYLTKPFSIVELLARVRVAFRHSQ  122
            + +I+ +R+F + PIIV+SAR +++  VEV+D GA+DY+TKPF+I EL AR+RVA+R S 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS-  120

Query  123  VEAQQKDDVKSTFEVDKLLIDFDKRKVIVDDVEVHLTPIEYNILSLLAKHHGKVLTHNFI  182
               +  + ++S F  + L IDFD + V+V++  VHLTP E+++L++L  H GKVLT + +
Sbjct  121  ---RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  IKEIWGSVIGNETKSLRVFMATLRRKI---EKQPANPRYIITEVGVGYRLND  231
            +K + G V   E  +LRV MA+LR+K+   +   ++ + IIT+  +GY++++
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

80) kdpE in NC_013315


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  154 bits (567),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 100/232 (44%), Positives = 158/232 (69%), Gaps = 7/232 (3%)

Query  3    KKLILLVEDDKTIRKFISTALLTQDYDVKEAITGKEGISIAVSYSPDVVLLDLGLEDMDG  62
            K  +L+VEDD +I  +I  AL  + Y V  A TGKE+     +  PD++LLDLGL D+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   IEVIKAIRQFSNIPIIVVSAREQDRDKVEVFDAGADDYLTKPFSIVELLARVRVAFRHSQ  122
            + +I+ +R+F + PIIV+SAR +++  VEV+D GA+DY+TKPF+I EL AR+RVA+R S 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS-  120

Query  123  VEAQQKDDVKSTFEVDKLLIDFDKRKVIVDDVEVHLTPIEYNILSLLAKHHGKVLTHNFI  182
               +  + ++S F  + L IDFD + V+V++  VHLTP E+++L++L  H GKVLT + +
Sbjct  121  ---RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  IKEIWGSVIGNETKSLRVFMATLRRKI---EKQPANPRYIITEVGVGYRLND  231
            +K + G V   E  +LRV MA+LR+K+   +   ++ + IIT+  +GY++++
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

81) kdpE in NC_013316


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  154 bits (567),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 100/232 (44%), Positives = 158/232 (69%), Gaps = 7/232 (3%)

Query  3    KKLILLVEDDKTIRKFISTALLTQDYDVKEAITGKEGISIAVSYSPDVVLLDLGLEDMDG  62
            K  +L+VEDD +I  +I  AL  + Y V  A TGKE+     +  PD++LLDLGL D+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   IEVIKAIRQFSNIPIIVVSAREQDRDKVEVFDAGADDYLTKPFSIVELLARVRVAFRHSQ  122
            + +I+ +R+F + PIIV+SAR +++  VEV+D GA+DY+TKPF+I EL AR+RVA+R S 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS-  120

Query  123  VEAQQKDDVKSTFEVDKLLIDFDKRKVIVDDVEVHLTPIEYNILSLLAKHHGKVLTHNFI  182
               +  + ++S F  + L IDFD + V+V++  VHLTP E+++L++L  H GKVLT + +
Sbjct  121  ---RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  IKEIWGSVIGNETKSLRVFMATLRRKI---EKQPANPRYIITEVGVGYRLND  231
            +K + G V   E  +LRV MA+LR+K+   +   ++ + IIT+  +GY++++
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

82) CK1_37130 in NC_021014


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  153 bits (566),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 93/208 (45%), Positives = 146/208 (71%), Gaps = 4/208 (1%)

Query  3    KTLILVVEDDRPIRNLIVTTLKTHDYKYLAAENGASAILEASSHNPDIVLLDLGLPDMEG  62
            KT +LVVEDD +I +LI  +L  + YK ++A  G  A +   +++PDI+LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VEVIKKIRTWSNMPIIVISARSEDMDKIEALDAGADDYITKPFSVEELLARIRVSQRRLA  122
            + +I+++R   + PIIVISAR+E+   +E LD GA+DY+TKPF+++EL ARIRV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  123  ITQSGKQPETSVFENGGLKIDYTAGCTFLKDRELHLTPIEYKLLCLLSRNVGKVLTHTYI  182
                + +   S F NG L ID+ A   +++++ +HLTP E++LL +L ++VGKVLT   +
Sbjct  119  -MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  TQQIWGRCSENDVASLRVFMATLRKKLE  210
             + + G  ++ ++A+LRV MA+LRKKL+
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLN  205

83) Sulku_0649 in NC_014762


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  153 bits (566),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 96/227 (43%), Positives = 149/227 (66%), Gaps = 4/227 (1%)

Query  1    MKETILIIDDDSAIRKLLEVALDAAGYHPVTIATGKEGLNRAAIEAPALVLLDLGLPDMD  60
            MK T+L+++DD AI  L++VAL    Y  VT  TGKE+  R   E P ++LLDLGLPD+D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GKEFLSQFREWSQSPVIVLSARSGEAEKIAALEGGCDDYLTKPFGTGELLARIKASLRRR  120
            G  ++ QFR+  ++P+IV+SAR+ E   +  L+ G +DY+TKPF  +EL ARI+ +L R 
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVAL-RM  119

Query  121  GISMGDNTSGLISGNLSLDIASHTVMLNNEELKLTPKEFDLLKILMQNSGKVLTHAWLLK  180
            + S     S + +G L++D+ + +V++N++ + LTP+EF+LL IL ++ GKVLT   LLK
Sbjct  120  SRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  181  EIWGIGYQNETHYLRVFINQLRQKIE--TDSTRPKR-IVTETGIGYR  224
             + G   + E   LRV +  LR+K++   D+   K+ I+T+  IGY+
Sbjct  180  SLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

84) CL2_05090 in NC_021016


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 97/233 (42%), Positives = 155/233 (67%), Gaps = 12/233 (5%)

Query  4    IKFNVLIAEDEENIGNFISAILKTNGYKPIIATTGNQA---IQCAESYCPDVILLDLGLP  60
            +K  +L+ ED+E I ++I   L  N YK + A TG++A   ++  +   PD+ILLDLGLP
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQ---PDIILLDLGLP  57

Query  61   DMDGIDVISEIRKWAVTPIIVISARNRESEKVKALDAGADDYITKPFGNQELLARIRTAL  120
            D+DG+ +I ++R    TPIIVISAR  E   V  LD GA+DY+TKPF  +EL ARIR AL
Sbjct  58   DIDGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVAL  117

Query  121  RHRRQPMGAETKTPMYHAGQLKIDFDKRRVFLGEEEIRLTQIEYKLVSLLAENAGKVITY  180
            R  R   ++ET  + +  G L IDFD + V++ E+ ++LT  E++L+++L ++ GKV+TY
Sbjct  118  RMSR---STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTY  174

Query  181  ESIIKDIWGPHADTNNRILRVNMANIRRKIE--KNPAVP-KYVFTEVGVGYRM  230
            + ++K + G   +T+   LRV+MA++R+K++  ++P    K ++T+  +GY+M
Sbjct  175  QVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

85) OBV_36680 in NC_016048


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  150 bits (554),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 97/230 (43%), Positives = 160/230 (70%), Gaps = 6/230 (2%)

Query  5    STILVIEDDKYISHFIDLSLSKEGYRVVIAETGDEGMFLFSSYHPSIVLLDLGLPDRDGV  64
            +T+LV+EDD  I H+ID++L+ + Y+VV A TG E+ F + + +P I+LLDLGLPD DG+
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  65   DILRELRTFTDVPILVVSARGQEAEKIAALDLGANDYVTKPFHMGELMARIRVaeraaak  124
             +++++R F D PI+V+SAR +E   +  LD GANDY+TKPF+++EL ARIRV       
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRV--ALRMS  120

Query  125  tnagtaearFVCDWLTVDYEKHRVLVDGKEIHLTPIEYKTLLLLIANRGKVLTHNYIIRQ  184
             ++ T ++RF  + LT+D++   VLV+ + +HLTP E++ L +L  + GKVLT + +++ 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  185  IWGY-EGGDSKSVRVFMASLRRKL---EKDSTHPRFILTEVGVGYRFSDL  230
            + GY +  +  ++RV MASLR+KL   +  +T+ ++I+T+  +GY+  +L
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHL  230

86) kdpE in NC_003030


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  149 bits (550),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 95/229 (42%), Positives = 153/229 (67%), Gaps = 6/229 (2%)

Query  4    KPYILVVEDDKPIRNFITTALSTQGYKYSETDKGNEAIALSMANSPDLIVLDLGLPDIDG  63
            K  +LVVEDD +I ++I  AL+ + YK   +  G+EA     ++ PD+I+LDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   IEVIGKIREWSKVPIIIVSARENERQKVEALDKGADDYITKPFGIGELLARIRVSLRHVN  123
            + +I ++R+    PII++SAR +E+  VE LD+GA+DY+TKPF I+EL ARIRV+LR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  124  AGKAKDKSIDFFKVKNLSVDFEKRRVSVNGKEVHLTPIEYKIMFLLCKYSGRVLTHNFII  183
             +++ +     F    L++DF+ + V VN + VHLTP E++++ +LC   G+VLT + ++
Sbjct  119  MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  NEIWGASVGNENQSLRVFMANLRRKIE--KDP-AQPEYIYTEVGVGYRL  229
            + + G     E  +LRV MA+LR+K++  +DP ++   I T+  +GY++
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

87) kdpE in NC_015687


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  149 bits (550),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 95/229 (42%), Positives = 153/229 (67%), Gaps = 6/229 (2%)

Query  4    KPYILVVEDDKPIRNFITTALSTQGYKYSETDKGNEAIALSMANSPDLIVLDLGLPDIDG  63
            K  +LVVEDD +I ++I  AL+ + YK   +  G+EA     ++ PD+I+LDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   IEVIGKIREWSKVPIIIVSARENERQKVEALDKGADDYITKPFGIGELLARIRVSLRHVN  123
            + +I ++R+    PII++SAR +E+  VE LD+GA+DY+TKPF I+EL ARIRV+LR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  124  AGKAKDKSIDFFKVKNLSVDFEKRRVSVNGKEVHLTPIEYKIMFLLCKYSGRVLTHNFII  183
             +++ +     F    L++DF+ + V VN + VHLTP E++++ +LC   G+VLT + ++
Sbjct  119  MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  NEIWGASVGNENQSLRVFMANLRRKIE--KDP-AQPEYIYTEVGVGYRL  229
            + + G     E  +LRV MA+LR+K++  +DP ++   I T+  +GY++
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

88) kdpE in NC_017295


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  149 bits (550),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 95/229 (42%), Positives = 153/229 (67%), Gaps = 6/229 (2%)

Query  4    KPYILVVEDDKPIRNFITTALSTQGYKYSETDKGNEAIALSMANSPDLIVLDLGLPDIDG  63
            K  +LVVEDD +I ++I  AL+ + YK   +  G+EA     ++ PD+I+LDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   IEVIGKIREWSKVPIIIVSARENERQKVEALDKGADDYITKPFGIGELLARIRVSLRHVN  123
            + +I ++R+    PII++SAR +E+  VE LD+GA+DY+TKPF I+EL ARIRV+LR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  124  AGKAKDKSIDFFKVKNLSVDFEKRRVSVNGKEVHLTPIEYKIMFLLCKYSGRVLTHNFII  183
             +++ +     F    L++DF+ + V VN + VHLTP E++++ +LC   G+VLT + ++
Sbjct  119  MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  NEIWGASVGNENQSLRVFMANLRRKIE--KDP-AQPEYIYTEVGVGYRL  229
            + + G     E  +LRV MA+LR+K++  +DP ++   I T+  +GY++
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

89) VC395_A0792 in NC_012583


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  147 bits (543),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 98/229 (43%), Positives = 160/229 (70%), Gaps = 12/229 (5%)

Query  6    KILIIEDEAPIQRFLTV-LISGYEYQVKVASTA-EQGLHLVANWNPHLILLDLGLPDQDG  63
             +L++ED+ +I +++ V L   Y Y+V  A T+ E +++L ++ +P++ILLDLGLPD DG
Sbjct  4    TLLVVEDDEAILHLIDVALTMNY-YKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDG  61

Query  64   ISLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP  123
            +SL +++R   +TPI+VISAR  E   V+ LD GANDY+TKPF  +EL ARIRVALR++ 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  STESVEQTRFELGDLVLDLVLKQVTKDGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE  183
            STE++ Q+RF  G L +D+  K V  + ++V LT  E+++L +L  ++GKVLT + +LK 
Sbjct  122  STETI-QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  184  VWGGNYVEHHHY--VRIHVAQLRHKV---EDNPAQPRFILTENGVGYRL  227
            + G  YV+H +   +R+H+A LR K+   +D  ++ ++I+T+  +GY++
Sbjct  181  LYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

90) VC0395_0465 in NC_009456


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  147 bits (543),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 98/229 (43%), Positives = 160/229 (70%), Gaps = 12/229 (5%)

Query  6    KILIIEDEAPIQRFLTV-LISGYEYQVKVASTA-EQGLHLVANWNPHLILLDLGLPDQDG  63
             +L++ED+ +I +++ V L   Y Y+V  A T+ E +++L ++ +P++ILLDLGLPD DG
Sbjct  4    TLLVVEDDEAILHLIDVALTMNY-YKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDG  61

Query  64   ISLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP  123
            +SL +++R   +TPI+VISAR  E   V+ LD GANDY+TKPF  +EL ARIRVALR++ 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  STESVEQTRFELGDLVLDLVLKQVTKDGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE  183
            STE++ Q+RF  G L +D+  K V  + ++V LT  E+++L +L  ++GKVLT + +LK 
Sbjct  122  STETI-QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  184  VWGGNYVEHHHY--VRIHVAQLRHKV---EDNPAQPRFILTENGVGYRL  227
            + G  YV+H +   +R+H+A LR K+   +D  ++ ++I+T+  +GY++
Sbjct  181  LYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

91) CK3_22910 in NC_021035


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  147 bits (543),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 96/233 (42%), Positives = 151/233 (65%), Gaps = 10/233 (4%)

Query  3    IKDRVLVVEDDKRISNFIKTVLEANNYDVIVAQTGAEA-YSMVTSQCPDVVILDLGLPDM  61
            +K  +LVVEDD  I ++I   L  N Y V+ A+TG EA + + T Q PD+++LDLGLPD+
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQ-PDIILLDLGLPDI  59

Query  62   DGMKILQGVREWSAMPVIVVSARTHERDKVEALDLGADDYITKPFGTSELLARIRTAIRH  121
            DG+ ++Q  R+    P+IV+SART+E+  VE LD GA+DY+TKPF   EL ARIR A+R 
Sbjct  60   DGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM  119

Query  122  TRSGIPNQPGGQTGVFKSGGLTIDYDKHRVFIDGVDAGLTQNEYKIVSLLGKYAGKVMTY  181
            +RS    Q+      F +G LTID+D   V+++     LT NE++++++L    GKV+TY
Sbjct  120  SRSTETIQSR-----FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTY  174

Query  182  DYIIKEIWGPNMKNDNRILRVNMANIRRKI---EKNPAEPQYIFTEVGVGYRI  231
            + ++K + G     +   LRV+MA++R+K+   +   +E + I+T+  +GY++
Sbjct  175  QVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

92) O3Y_16033 in NC_016945


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  147 bits (541),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 98/229 (43%), Positives = 159/229 (70%), Gaps = 12/229 (5%)

Query  6    KILIIEDEAPIQRFLTV-LISGYEYQVKVASTA-EQGLHLVANWNPHLILLDLGLPDQDG  63
             +L++ED+ +I +++ V L   Y Y+V  A T+ E +++L ++ +P++ILLDLGLPD DG
Sbjct  4    TLLVVEDDEAILHLIDVALTMNY-YKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDG  61

Query  64   ISLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP  123
            +SL +++R   +TPI+VISAR  E   V+ LD GANDY+TKPF  +EL ARIRVALR++ 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE  183
            STE++ Q+RF  G L +D+  K V    ++V LT  E+++L +L  ++GKVLT + +LK 
Sbjct  122  STETI-QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  184  VWGGNYVEHHHY--VRIHVAQLRHKV---EDNPAQPRFILTENGVGYRL  227
            + G  YV+H +   +R+H+A LR K+   +D  ++ ++I+T+  +GY++
Sbjct  181  LYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

93) VCLMA_B0329 in NC_017269


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  147 bits (541),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 98/229 (43%), Positives = 159/229 (70%), Gaps = 12/229 (5%)

Query  6    KILIIEDEAPIQRFLTV-LISGYEYQVKVASTA-EQGLHLVANWNPHLILLDLGLPDQDG  63
             +L++ED+ +I +++ V L   Y Y+V  A T+ E +++L ++ +P++ILLDLGLPD DG
Sbjct  4    TLLVVEDDEAILHLIDVALTMNY-YKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDG  61

Query  64   ISLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP  123
            +SL +++R   +TPI+VISAR  E   V+ LD GANDY+TKPF  +EL ARIRVALR++ 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE  183
            STE++ Q+RF  G L +D+  K V    ++V LT  E+++L +L  ++GKVLT + +LK 
Sbjct  122  STETI-QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  184  VWGGNYVEHHHY--VRIHVAQLRHKV---EDNPAQPRFILTENGVGYRL  227
            + G  YV+H +   +R+H+A LR K+   +D  ++ ++I+T+  +GY++
Sbjct  181  LYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

94) VCM66_A0491 in NC_012580


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  147 bits (541),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 98/229 (43%), Positives = 159/229 (70%), Gaps = 12/229 (5%)

Query  6    KILIIEDEAPIQRFLTV-LISGYEYQVKVASTA-EQGLHLVANWNPHLILLDLGLPDQDG  63
             +L++ED+ +I +++ V L   Y Y+V  A T+ E +++L ++ +P++ILLDLGLPD DG
Sbjct  4    TLLVVEDDEAILHLIDVALTMNY-YKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDG  61

Query  64   ISLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP  123
            +SL +++R   +TPI+VISAR  E   V+ LD GANDY+TKPF  +EL ARIRVALR++ 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE  183
            STE++ Q+RF  G L +D+  K V    ++V LT  E+++L +L  ++GKVLT + +LK 
Sbjct  122  STETI-QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  184  VWGGNYVEHHHY--VRIHVAQLRHKV---EDNPAQPRFILTENGVGYRL  227
            + G  YV+H +   +R+H+A LR K+   +D  ++ ++I+T+  +GY++
Sbjct  181  LYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

95) VCD_000796 in NC_012667


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  147 bits (541),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 98/229 (43%), Positives = 159/229 (70%), Gaps = 12/229 (5%)

Query  6    KILIIEDEAPIQRFLTV-LISGYEYQVKVASTA-EQGLHLVANWNPHLILLDLGLPDQDG  63
             +L++ED+ +I +++ V L   Y Y+V  A T+ E +++L ++ +P++ILLDLGLPD DG
Sbjct  4    TLLVVEDDEAILHLIDVALTMNY-YKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDG  61

Query  64   ISLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP  123
            +SL +++R   +TPI+VISAR  E   V+ LD GANDY+TKPF  +EL ARIRVALR++ 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE  183
            STE++ Q+RF  G L +D+  K V    ++V LT  E+++L +L  ++GKVLT + +LK 
Sbjct  122  STETI-QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  184  VWGGNYVEHHHY--VRIHVAQLRHKV---EDNPAQPRFILTENGVGYRL  227
            + G  YV+H +   +R+H+A LR K+   +D  ++ ++I+T+  +GY++
Sbjct  181  LYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

96) Vch1786_II0221 in NC_016446


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  147 bits (541),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 98/229 (43%), Positives = 159/229 (70%), Gaps = 12/229 (5%)

Query  6    KILIIEDEAPIQRFLTV-LISGYEYQVKVASTA-EQGLHLVANWNPHLILLDLGLPDQDG  63
             +L++ED+ +I +++ V L   Y Y+V  A T+ E +++L ++ +P++ILLDLGLPD DG
Sbjct  4    TLLVVEDDEAILHLIDVALTMNY-YKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDG  61

Query  64   ISLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP  123
            +SL +++R   +TPI+VISAR  E   V+ LD GANDY+TKPF  +EL ARIRVALR++ 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE  183
            STE++ Q+RF  G L +D+  K V    ++V LT  E+++L +L  ++GKVLT + +LK 
Sbjct  122  STETI-QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  184  VWGGNYVEHHHY--VRIHVAQLRHKV---EDNPAQPRFILTENGVGYRL  227
            + G  YV+H +   +R+H+A LR K+   +D  ++ ++I+T+  +GY++
Sbjct  181  LYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

97) VCA0532 in NC_002506


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  147 bits (541),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 98/229 (43%), Positives = 159/229 (70%), Gaps = 12/229 (5%)

Query  6    KILIIEDEAPIQRFLTV-LISGYEYQVKVASTA-EQGLHLVANWNPHLILLDLGLPDQDG  63
             +L++ED+ +I +++ V L   Y Y+V  A T+ E +++L ++ +P++ILLDLGLPD DG
Sbjct  4    TLLVVEDDEAILHLIDVALTMNY-YKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDG  61

Query  64   ISLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP  123
            +SL +++R   +TPI+VISAR  E   V+ LD GANDY+TKPF  +EL ARIRVALR++ 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE  183
            STE++ Q+RF  G L +D+  K V    ++V LT  E+++L +L  ++GKVLT + +LK 
Sbjct  122  STETI-QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  184  VWGGNYVEHHHY--VRIHVAQLRHKV---EDNPAQPRFILTENGVGYRL  227
            + G  YV+H +   +R+H+A LR K+   +D  ++ ++I+T+  +GY++
Sbjct  181  LYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

98) Ddes_1681 in NC_011883


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  146 bits (538),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 107/231 (47%), Positives = 148/231 (65%), Gaps = 7/231 (3%)

Query  16   ILVIEDDKAIRALVTAALESRAMACITAGTGREAIAEASRAGPDVILLDLGLPDMDGTDI  75
            +LV+EDD AI  L+  AL       +TA TG+EA        PD+ILLDLGLPD+DG  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  76   IRTVRQWSMVPIIVLSARSEDDDKVAALDAGADDYLTKPFSIDEllarlraalrrGRYER  135
            I+  R+    PIIV+SAR+E++  V  LD GA+DY+TKPF+IDEL AR+R ALR +R   
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  136  GNPDRDASFFENGPLRIDFAAGSASVNGQEIHLAPMEYKLLCLLARNAGKVLTHKTILQA  195
                R    F NGPL IDF A S  VN Q +HL+P E++LL +L ++ GKVLT + +L++
Sbjct  125  TIQSR----FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  196  VWGSSLPQNLPSLRVFMATLRKKLE-NAAPRCD--YIHTHVGVGYRMARLG  243
            + G     ++++LRV MA+LRKKL+    P  +   I TH  +GY+M +L 
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

99) GPA_09080 in NC_021021


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 97/227 (43%), Positives = 151/227 (67%), Gaps = 6/227 (2%)

Query  12   TVLIVEDDNAVKSLIATALKVQGYRlleagtggaalleattKNPDVIILDLGLPDADGID  71
            T+L+VEDD+A+  LI  AL ++ Y+++ A TG  A +   T +PD+I+LDLGLPD DG+ 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  72   LIRQVRTWSHTPIIVVSARTEDADKVAALDAGADDYLIKPFSVEEllarlrvatrrlaaD  131
            LI+Q R   +TPIIV+SARTE+   V  LD GA+DY+ KPF+++E           L   
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDE---LRARIRVALRMS  120

Query  132  SGTDRDGPVYENGDLRIDYAARTVTLAGEEVHLTPIEYKLLALLARNTGKVLTHNAILKE  191
             +T+   + + NG L ID+ A++V +  + VHLTP E++LL++L ++ GKVLT + +LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  192  VWGNALASDLPSLRVFMATLRKKIE--RDP-AHPAYLQTHVGIGYRM  235
            + G    +++++LRV MA+LRKK++  +DP ++   + TH  IGY+M
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

100) Astex_1108 in NC_014816


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 146/229 (64%), Gaps = 5/229 (2%)

Query  4    LQPKVLVIEDDPQIRKFLTITLTSHDYTVIPAETGREG-IRLATSVKPDAVLLDLGLPDI  62
            ++  +LV+EDD  I  ++ ++LT + Y V+ A TG+E+ +RL T  +PD +LLDLGLPDI
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDI  59

Query  63   DGTEVIGSIRSWSKMPILVVSVRDQEEEKVKAFDLGANDFVTKPFGTAELMARLRASLRD  122
            DG  +I  +R     PI+V+S R +E+  V  +D GAND++TKPF   EL AR+R +LR 
Sbjct  60   DGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM  119

Query  123  SIVASVEDTRVEVGDLCIDLAAHKVSVRDTPIKLSPKEFALLKVLATHAGKLLTHKYLMQ  182
            S  +   ++R   G L ID+ A  V V + ++ L+P+EF LL +L  H GK+LT + L++
Sbjct  120  SRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  183  KVWGEAQADDNQYLRIYIAQLRQKLEI--DPARD-HFIVNEPGIGYRLE  228
             + G  +  +   LR+ +A LR+KL+   DP  +  +I+ +P IGY+++
Sbjct  180  SLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQ  228

101) CCU_16700 in NC_021018


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  144 bits (530),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 100/234 (43%), Positives = 154/234 (66%), Gaps = 7/234 (2%)

Query  3    KPLVLVVEDDRPVRNLIVTTLKAHDYRYLTAENGHSAIIEATSHNPDIVLLDLGLPDIDG  62
            K  +LVVEDD ++ +LI  +L  + Y+ +TA  G  A +   +++PDI+LLDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   TQVIESIRSWSNMPIIVISARSEDKDKITALDAGADDYLTKPFSIEEllarlrvtqrrll  122
              +I+ +R   + PIIVISAR+E++  +  LD GA+DY+TKPF+I+EL AR+RV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  llQASGDADSPVFQNGKLKIDYAAGCAYLNGEELHLTPIEYKLLCLLSHNVGKVLTHTYI  182
                S ++  + F NG L ID+ A    +N + +HLTP E++LL +L H+VGKVLT   +
Sbjct  122  ----STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  TQQIWGSSWEKDIASLRVFMATLRKKL---ESQKDSPQYIQTHIGVGYRMLRVD  233
             + + G   + ++A+LRV MA+LRKKL   +  +   + I TH  +GY+M +++
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

102) Rleg2_5840 in NC_011366


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  143 bits (525),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 144/226 (64%), Gaps = 6/226 (2%)

Query  8    ILVVDDEPPIRKLLRVGLTAQGYEVQEAANAAGARQSVADSLPDLIVLDLGLPDISGHDL  67
            +LVV+D+ +I  L+ V+LT + Y V  A  +  A   +    PD+I+LDLGLPDI G  L
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  68   LQAWRDEGLSIPIVILSSRTDEAGIVTALESGADDYVTKPFGVNELGARIRVALRHRLQQ  127
            +Q  RD  +  PI+++S+RT+E  IV  L+ GA+DY+TKPF ++EL ARIRVALR     
Sbjct  65   IQQFRD-FVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  128  QGEKAIFQTGGLSIDLVKRIVKVDGQDIKLSPKEYDILRVLAQHAGKVLTHQFLLKQVWG  187
            +  ++ F  G L+ID+  + V V+ Q + L+P+E+++L +L +H GKVLT Q LLK + G
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  188  --PAADVQYLRVYIRQLRQKVEQIPD---QPHYITTETGVGYRLRE  228
                +++  LRV +  LR+K++   D   +   I T+  +GY++++
Sbjct  184  YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

103) FP2_19490 in NC_021042


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 111/230 (49%), Positives = 159/230 (70%), Gaps = 8/230 (3%)

Query  3    KPTILVVEDDVPVRCLITTTLKTHGYKYLTASNGETAIMMTTSHNpdimlldlglpdidg  62
            K T+LVVEDD ++  LI  +L  + YK +TA  G  A     +++PDI+LLDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   iEVIRSVRTWSNLPIIVLSARSEDSDKIEALDNGADDYLTKPFSVDELLARLRVTQRRLN  122
            + +I+  R   + PIIV+SAR+E+   +E LD GA+DY+TKPF++DEL AR+RV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  LLASDGINSPVFVNGPLKIDFSAGCVWLSENELHLTPIEYKLLCVLAHNVGKVLTHTSLT  182
              +++ I+S  F NGPL IDF A  V ++E+ +HLTP E++LL +L H+VGKVLT   L 
Sbjct  122  --STETIQSR-FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  183  QKVWGSTQENDIASLRVYMASLRKKLERYPDAPH----LIQTHVGVGYRM  228
            + + G  ++ ++A+LRV MASLRKKL+ Y + P+    LI TH  +GY+M
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLN-YTQDPNTEKKLIITHPRIGYQM  227

104) RHOM_04305 in NC_015977


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 99/234 (43%), Positives = 155/234 (67%), Gaps = 7/234 (2%)

Query  3    KPLILVVEDDRPVRNLIVTTLKSHDYRYLTAENGHGAIMEATSHNPDIVLLDLGLPDIDG  62
            K  +LVVEDD ++ +LI  +L  + Y+ +TA  G  A     +++PDI+LLDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   TQVIESIRSWSNMPIIVISARSEDRDKIMALDAGADDYLTKPFSVEEllarlrvtqrrll  122
              +I+ +R   + PIIVISAR+E++  +  LD GA+DY+TKPF+++EL AR+RV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  llQASGDADTPIFENGELKIDYAAGCAYLKGEELHLTPIEYKLLCLLSHNVGKVLTHTYI  182
                S ++  + F NG L ID+ A    ++ + +HLTP E++LL +L H+VGKVLT   +
Sbjct  122  ----STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  TQQIWGSSWENDIASLRVFMATLRKKLELQKDSP---QYIQTHIGVGYRMLRVD  233
             + + G   + ++A+LRV MA+LRKKL+  +D+    + I TH  +GY+M +++
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

105) RBR_02450 in NC_021013


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 102/235 (44%), Positives = 155/235 (66%), Gaps = 9/235 (3%)

Query  3    KPLVLVVEDDRPIRNLIVTTLKAHDYHYLTAENGHSAIIEATSHNPDIVLLDLGLPDIDG  62
            K  +LVVEDD +I +LI  +L  + Y  +TA  G  A +   +++PDI+LLDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   TQVIESIRSWSNMPIIVISARSEDKDKITALDAGADDYLTKPFSIEEllarlrvtqrrll  122
              +I+ +R   + PIIVISAR+E++  +  LD GA+DY+TKPF+I+EL AR+RV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  llQASGDADSPVFQNGKLKIDYAAGCAYLNGEELHLTPIEYKLLCLLSHNVGKVLTHTYI  182
                S ++  + F NG L ID+ A    +N + +HLTP E++LL +L H+VGKVLT   +
Sbjct  122  ----STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  TQQIWGSSWENDIASLRVFMATLRKKL----EPQRDCPQYIQTHIGVGYRMLRVD  233
             + + G   + ++A+LRV MA+LRKKL    +P+ +  + I TH  +GY+M +++
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTE-KKLIITHPRIGYQMQHLE  231

106) kdpE in NC_022000


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  141 bits (520),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 95/225 (43%), Positives = 149/225 (67%), Gaps = 7/225 (3%)

Query  5    NILIVEDEKEILRFVRLALENEGFRVYDASECQRGLIEAASRKPDLVILDLGLPDKDGLC  64
             +L+VED+  IL+++ +AL  + ++V  A   + + +   + +PD+++LDLGLPD DGL 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  65   FIQDFRQWSSTPIIVLSARDSEQDKVDALDAGADDYLTKPFGISELLARVRASLRRFVKQ  124
            +IQ+FR+   TPIIV+SAR  EQ  V+ LD GA+DY+TKPF I EL AR+R +LR     
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  125  ETETTQFTFGDITIDWVKRIVTRQGVPIHFTPTEFRLLSELVNNSGKVLTQRHLMQHVWG  184
            ET  ++FT G +TID   + V  +  ++H+TP EF+LL+ L ++ GKVLT + L++ + G
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  185  PNFVEHSHY--LRIYMGHLRQKIE--TDPTCPVHL-ITETGIGYR  224
              +V+H++   LR+ M+ LR+K++   DP     L IT+  IGY+
Sbjct  184  --YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

107) kdpE in NC_010554


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  141 bits (517),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 94/225 (42%), Positives = 149/225 (67%), Gaps = 7/225 (3%)

Query  5    NILIVEDEKEILRFVRLALENEGFRVYDASECQRGLIEAASRKPDLVILDLGLPDKDGLC  64
             +L+VED+  IL+++ +AL  + ++V  A   + + +   + +PD+++LDLGLPD DGL 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  65   FIQDFRQWSSTPIIVLSARDSEQDKVDALDAGADDYLTKPFGMSELLARVRASLRRFVKQ  124
            +IQ+FR+   TPIIV+SAR  EQ  V+ LD GA+DY+TKPF + EL AR+R +LR     
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  125  ETETTQFTFGDITIDWVKRIVTRQGVPIHFTPTEFRLLSELVNNSGKVLTQRHLMQHVWG  184
            ET  ++FT G +TID   + V  +  ++H+TP EF+LL+ L ++ GKVLT + L++ + G
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  185  PNFVEHSHY--LRIYMGHLRQKIE--TDPTCPVHL-ITETGIGYR  224
              +V+H++   LR+ M+ LR+K++   DP     L IT+  IGY+
Sbjct  184  --YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

108) FPR_27460 in NC_021020


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  140 bits (515),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 109/230 (48%), Positives = 158/230 (69%), Gaps = 8/230 (3%)

Query  3    KPSILVVEDDVPVRCLITTTLKTHGYKYLTASNGETAIMMTTSHNpdimlldlglpdidg  62
            K ++LVVEDD ++  LI  +L  + YK +TA  G  A     +++PDI+LLDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   iEVIRSVRTWSNLPIIVLSARSEDSDKIEALDNGADDYLTKPFSVDELLARLRVTQRRLN  122
            + +I+  R   + PIIV+SAR+E+   +E LD GA+DY+TKPF++DEL AR+RV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  LLASDGINSPVFVNGPLKIDFSAGCVWLSENELHLTPIEYKLLCVLAHNVGKVLTHTSLT  182
              +++ I+S  F NGPL IDF A  V ++E+ +HLTP E++LL +L H+VGKVLT   L 
Sbjct  122  --STETIQSR-FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  183  QKVWGSTQENDIASLRVYMASLRKKLERCPDAPH----LIQTHVGVGYRM  228
            + + G  ++ ++A+LRV MASLRKKL+   + P+    LI TH  +GY+M
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLN-YTQDPNTEKKLIITHPRIGYQM  227

109) EC1_18790 in NC_021019


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  140 bits (513),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 111/232 (48%), Positives = 161/232 (70%), Gaps = 5/232 (2%)

Query  3    NCSVLVVEDDKSVRNLIVTTLQANDYPYTSAENGKEALSKIETERpdvllldlglpdidg  62
            + ++LVVEDD ++ +LI  +L  N Y   +A  GKEA  ++ TE+PD++LLDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   iEVIKELRTWSNMPIIVISARSEDKDKIQALDMGADDYLTKPFSVDELLARLRVTQRRLT  122
            + +I+++R   + PIIVISAR+E++  ++ LD GA+DY+TKPF++DEL AR+RV+ R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  MISSNVSNSVFHNGKLTIDYSAGCAFVDEQQLHLTPIEFKLLCLLSKNVGKVLTHTYLTK  182
              S++  +S F NG LTID+ A   +V+EQ +HLTP EF+LL +L  +VGKVLT   L K
Sbjct  122  --STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  183  EIWGTSWETDMASLRVFMATLRKKL---EAKDNSAHYIQTHIGVGYRMLKVE  231
             + G   +T+MA+LRV MA+LRKKL   +  +     I TH  +GY+M  +E
Sbjct  180  SLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

110) kdpE in NC_014034


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 93/226 (42%), Positives = 150/226 (67%), Gaps = 5/226 (2%)

Query  4    LLVVDDDDQIQTMLRIALETAGYEIVAATTGQEA-IRLAASIAPEAILLDLGLPDRDGKE  62
            LLVV+DD+ I  ++ +AL    Y +V+A TG+EA +RL +   P+ ILLDLGLPD DG  
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDGLS  63

Query  63   VLKAVRAFSAVPVIVLSARDREAEKVEALDLGADDYLEKPFGISELQarlraaarhatra  122
            +++  R F   P+IV+SAR  E   VE LD GA+DY+ KPF I EL+AR+R A R +  +
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  KGETTRLVLGALSVDLEKRLVQKDGQPVRLTPKEFALLSVLVRNPGRVVTHRQILTAVWG  182
                +R+  G+L++D++ + V  + Q+V+LTP+EF LL++L ++ G+V+T + +L ++ G
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  183  PAHHDDTQYLRVFIGQLRAKIE--PDPAAP-VLIVTEPGVGYRLAE  225
              +H +   LRV ++ LR K++   DP +   LI+T+P +GY++ +
Sbjct  184  YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

111) Bphy_2053 in NC_010622


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 93/231 (41%), Positives = 155/231 (68%), Gaps = 10/231 (4%)

Query  4    LSITVVLIEDEQQIRRFVRASLEGEGMTVYDAPTGKQGLIEAATRKPDLVIVDLGLPDTD  63
            +  T++++ED++ I +++  +L  +   V  A TGK++ +   T +PD++++DLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  64   GLDVIRELRGWSELPIIVLSARTQESEKVAALDAGADDYLTKPFGVSELFARIRAHLRRR  123
            GL +I+++R+  + PIIV+SART+E   V  LD GA+DY+TKPF + EL ARIR  LR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM-  119

Query  124  NQGGPAETPQVQF--GGVTVDLALRQVSRDGEPVHLTPLEYRLLATLVRHAGRVLTHRQL  181
              + ++ET Q +F  G +T+D+  + V  + ++VHLTP E++LL+ L +H G+VLT + L
Sbjct  120  --SRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  182  LRDVWG-PSHVESHHYLRIYMAHLRQKLE--RDP-AQPEHIVTETGVGYRL  228
            L+ + G  +H E    LR+ MA LR+KL+  +DP ++   I+T+  +GY++
Sbjct  178  LKSLYGYVNHTEMAA-LRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

112) ETA_23200 in NC_010694


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 92/225 (41%), Positives = 154/225 (69%), Gaps = 4/225 (1%)

Query  2    TTILIVEDEKEIRHFLRVALEGEGFRIVDAETLKRGLIEAATRKPQLVILDLGLPDGDGS  61
            TT+L+VED+  I H++ VAL  + +++V A T K + +   T +P++++LDLGLPD DG 
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  62   QFIREIRQWSTIPVIVLSARSDEQDKIAALDAGADDFLTKPFGVGELLARVRVALRHHPQ  121
             +I+++R+    P+IV+SAR++EQ  +  LD GA+D++TKPF ++EL AR+RVALR  ++
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR-MSR  121

Query  122  NGESGQAQIGFGSVSVDIAAHRVTRNGEALHLTPTEFRLLVSLLNHPGKVMTQRQLLMLV  181
            + E+ Q+++  G++++D+ A  V  N +++HLTP EF+LL  L +H GKV+T + LL  +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  182  WGPNAVEHHHYLRIYMGHLRQKLE--QDPARPQHL-LTEIGVGYR  223
             G     +   LR+ M+ LR+KL+  QDP   + L +T+  +GY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

113) Palpr_1546 in NC_014734


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 156/227 (69%), Gaps = 8/227 (3%)

Query  4    KMNILIIDDEVQIQKLLEITLNNNDYHTLIASTAKEGISTAVIHPPDLIVLDLGLPDEDG  63
            K  +L+++D+  I  L++++L  N Y  + A T+KE+      + PD+I+LDLGLPD DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   QSVLIKLREWYLGAIIILSVRSSEEDIIRALDNGANDYLTKPFRTGELLARIRTALRQTQ  123
             S++ ++R+    +II++S R+ E+ I+  LD GANDY+TKPF  +EL ARIR ALR ++
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  LNPTVQ-KLEFDNLSIDLTSRTVTLDNESLKLTATEYSLLTLLAKNDGKVLTHQYILKQI  182
               T+Q ++  + L+ID+ +++V ++++S+ LT+ E+ LLT+L  + GKVLT Q +LK +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  183  WGPGYTQQSQY--LRVFVGQLRKKIE--PNPN-NPKFILTESGIGYR  224
               GY ++++   LRV ++ LRKK++   +PN + K+I+T++ IGY+
Sbjct  182  Y--GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

114) Bphyt_1312 in NC_010681


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 94/228 (42%), Positives = 148/228 (65%), Gaps = 10/228 (4%)

Query  7    TVVLIEDEKQIRRFVRTALEGEGIVVHDAETGKQGLVEAATRKPDLVIVDLGLPDTDGLD  66
            T++++ED+  I +++  AL  +   V  A TGK++     T +PD++++DLGLPD DGL 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  67   VIRELRGWSELPVIVLSARTQESEKVAALDAGADDYLTKPFGVSELLARIRAHMRRRNQG  126
            +I+++R+  + P+IV+SART+E   V  LD GA+DY+TKPF + EL ARIR  +R    +
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM---S  120

Query  127  GANETPQVRF--GTVTVDLALRQVSRDGAVVHLTPIEYRLLATLVRHAGRVLTHRQLLRE  184
             + ET Q RF  G +T+D+  + V  +   VHLTP E++LL+ L +H G+VLT + LL+ 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  185  VWG-PSHVESHHYLRIYMAHLRGKLE--RDP-AQPEHIITETGVGYRL  228
            + G  +H E    LR+ MA LR KL+  +DP ++   IIT+  +GY++
Sbjct  181  LYGYVNHTEMAA-LRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

115) Palpr_2668 in NC_014734


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 93/225 (42%), Positives = 142/225 (64%), Gaps = 5/225 (2%)

Query  4    KLTILIIDDEIQIRRLLEINLSANGYRAVEAETGKDGCLLAASVNPALIILDLGLPDMDG  63
            K T+L+++D+  I +L+++ L+ N Y+ V A TGK++ +   + +P +I+LDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   LEVLKKLRDWYTGPIIILSARNSEEDIVWALDNGANDYLTKPFRTRELLARIRVATHQVI  123
            L +++++RD    PII++SAR  E+ IV  LD GANDY+TKPF   EL ARIRVA +   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  RQQDAAMVFDN--LTIDLSKHVATKNGEIIKLTTTEFSLLALMAKNEGRVLTHVYILQEI  181
              +     F N  LTID+       N + + LT  EF LL+++  + G+VLT   +L+ +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  182  WGYGYTEQTQYLRVFVAQLRKKI---EDDPTKPKLLITESGIGYR  223
             GY    +   LRV +A LRKK+   +D  T  KL+IT++ IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

116) kdpE in NC_012796


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  136 bits (501),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 92/226 (41%), Positives = 149/226 (66%), Gaps = 4/226 (1%)

Query  5    KKTILIVDDEPPIRRFLTPFLEAEGYAVVEAGLGREALSLIASHEPDVILLDLGLPDMDG  64
            K T+L+V+D+ +I +++   L  + Y VV A  G+EA   + +++PD+ILLDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  65   EELLRALPMWVRAKVIVLSVRARERDKVTALDLGASDYLTKPFSLAELAARIRVCLRRGG  124
              L++ +   V + +IV+S R+ E+  V  LD GA+DY+TKPF++ EL ARIRV LR + 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  125  GDGESPPTRYVFGELWIDMEAHTAGLAAQDLHLTPTEFKLLAYLARHAGKVVTHGQLLKA  184
            +  E+  +R+  G L ID +A +  +  Q +HLTP EF+LL+ L +H GKV+T   LLK+
Sbjct  122  S-TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  185  VWGKQSQGQEHYVRIHIHKLRQKIE--QDP-ARPRYLRTETGIGYR  227
            + G  ++ +   +R+H+  LR+K++  QDP +  + + T+  IGY+
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

117) Bxe_A3248 in NC_007951


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  136 bits (500),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 149/228 (66%), Gaps = 10/228 (4%)

Query  7    TVVLIEDEKQIRRFVRTALEGEGIVVHDAETGKQGLVEAATRKPDLVIVDLGLPDTDGLD  66
            T++++ED+  I +++  AL  +   V  A TGK++     T +PD++++DLGLPD DGL 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  67   VIRELRGWSELPVIVLSARTQETEKVAALDAGADDYLTKPFGVSELLARIRAHMRRRNQG  126
            +I+++R+  + P+IV+SART+E   V  LD GA+DY+TKPF + EL ARIR  +R    +
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM---S  120

Query  127  GANESPQVRF--GTVTVDLALRQVSRDGAAVHLTPIEYRLLATLVRHAGRVLTHRQLLRE  184
             + E+ Q RF  G +T+D+  + V  +  +VHLTP E++LL+ L +H G+VLT + LL+ 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  185  VWG-PSHVESHHYLRIYMAHLRGKLE--RDP-AQPEHIITETGVGYRL  228
            + G  +H E    LR+ MA LR KL+  +DP ++   IIT+  +GY++
Sbjct  181  LYGYVNHTEMAA-LRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

118) Elen_2842 in NC_013204


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 97/232 (42%), Positives = 159/232 (69%), Gaps = 8/232 (3%)

Query  7    ILVVEDDAAVRRLVTTTLDLHGYAYREARTASQALLELSSQPPDLAILDLGLPDGDGVEV  66
            +LVVEDD A+ +L+  +L ++ Y    A+T+ +A + L ++ PD+ +LDLGLPD DG+ +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  67   IRTLRGWSSLPVIVLSARLEDADKVEALDAGADDYLVKPFSveellarvrvalrrldrer  126
            I+ +R+    P+IV+SAR E+   VE LD GA+DY+ KPF+++EL AR+RVALR      
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR---  121

Query  127  aMKGDADEAVYRNGSLRIDYAAGSVWRDDEEIHLTPFEYKLLCLLARNTGKVLTHNYLLK  186
                ++ ++ + NG+L ID+ A SV  +++ +HLTP E++LL +L ++ GKVLT + LLK
Sbjct  122  --STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  187  EVWGTILASDRSSLRVFMATLRKKIE--PDP-ANPRYIQTHVGVGYRMMRVE  235
             + G +  ++ ++LRV MA+LRKK++   DP ++ + I TH  +GY+M ++E
Sbjct  180  SLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

119) Clos_0611 in NC_009922


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 153/232 (66%), Gaps = 12/232 (5%)

Query  4    KPVIMIVEDEEPISEFISIKLELQGYRTLKAYNGQEA-MSLAASHCPDLILMDLGLPDKD  62
            K  +++VED+E+I ++I + L ++ Y+ + A  G+EA   L + + PD+IL+DLGLPD D
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQ-PDIILLDLGLPDID  60

Query  63   GMEVLKFIRGWSLVPIIIISARHEEKFIVSALDNGADDYITKPFNNAILVARVRTALRRG  122
            G+ +++ +R+    PII+ISAR EE+ IV  LD GA+DY+TKPFN   L AR+R ALR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  123  HIAKIKNSNMNKSFSLDDLYIDYDKRIVTVAGNPVHLTPIEYRIIVLLSLNAGTVVTHEF  182
            +        ++  F+ + L ID+D + V V  ++VHLTP E++++ +L  + G V+T + 
Sbjct  121  R----STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQV  176

Query  183  LSRELWGPYVNKSK--ALRVNVANLRRKI---EKNTAEPQYILTEMGVGYRM  229
            L + L G YVN +   ALRV++A+LR+K+   +   +E + I+T+  +GY+M
Sbjct  177  LLKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

120) Bpro_4253 in NC_007948


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 98/231 (43%), Positives = 151/231 (66%), Gaps = 10/231 (4%)

Query  1    MTLRVLVVEDDREIRALMQSSLAVEGFDVRTAASLSEAGALLRHDPPDVIVLDLGLPDGD  60
            M   +LVVEDD  I  L++ +L+++ + V TA +  EA+  LR + PD+I+LDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GVQLVREVRRQQSVPIIVVSARHQEAQKIALLDAGADDYLTKPFSVGELLARIRVALR-H  119
            G+ L+++ R     PIIV+SAR +E   + +LD GA+DY+TKPF+++EL ARIRVALR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  120  RGTALAAAVTVHELDDLRIDLAAHVVLRAGETLHLTPTEFKLLARLVRSAGRVVTHRQLL  179
            R+T    +   +  + L ID+ A  VL   +++HLTP EF+LL+ L +  G+V+T + LL
Sbjct  121  RSTETIQSRFTN--GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  180  VDVWGPEFTEHTHY--LRLYMAQLRAKIE--QDPAEPRHL-LTETGVGYRL  225
              + G  + +HT+   LR+ MA LR K++  QDP   + L +T+  +GY++
Sbjct  179  KSLYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

121) O5Y_17155 in NC_022115


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 147/225 (66%), Gaps = 4/225 (1%)

Query  2    SRILVVDDEPQILRALRINLTVRGYDVVtastgagalraaaERPPDVVILDLGLPDMDGT  61
            + +LVV+D+  IL+ + + LT+  Y VVTA TG  A        PD+++LDLGLPD+DG 
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  62   EVLAGLRGWCTAPVIVLSARTDSADKVEALDAGADDYVTKPFGMDEFLARVRAAARRGTS  121
             ++  +R+   +P+IV+SART+    VE LD GA+DY+TKPF +DE+ AR+R A R +  
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS-R  121

Query  122  AADTSEPSVETASFTVDLAAKTVSRRGEQVHLTPTEWGMLEMLVRNRGKLVGQKELLREV  181
            +++T ++    +++T+D+ AK+V    + VHLTP E  +L +L ++ GK++  + LL+ +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  182  WGPAYDTETHYLRVYLAQLRRKLE--DDPANPKHL-ITEAGMGYR  223
             G   +TE   LRV +A LR+KL+  +DP   K L IT++ +GY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

122) kdpE in NC_012490


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 147/225 (66%), Gaps = 4/225 (1%)

Query  2    SRILVVDDEPQILRALRINLTVRGYDVVtastgagalraaaERPPDVVILDLGLPDMDGT  61
            + +LVV+D+  IL+ + + LT+  Y VVTA TG  A        PD+++LDLGLPD+DG 
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  62   EVLAGLRGWCTAPVIVLSARTDSADKVEALDAGADDYVTKPFGMDEFLARVRAAARRGTS  121
             ++  +R+   +P+IV+SART+    VE LD GA+DY+TKPF +DE+ AR+R A R +  
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS-R  121

Query  122  AADTSEPSVETASFTVDLAAKTVSRRGEQVHLTPTEWGMLEMLVRNRGKLVGQKELLREV  181
            +++T ++    +++T+D+ AK+V    + VHLTP E  +L +L ++ GK++  + LL+ +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  182  WGPAYDTETHYLRVYLAQLRRKLE--DDPANPKHL-ITEAGMGYR  223
             G   +TE   LRV +A LR+KL+  +DP   K L IT++ +GY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

123) kdpE in NC_014558


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  133 bits (489),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 105/237 (45%), Positives = 165/237 (70%), Gaps = 11/237 (4%)

Query  1    MKNRILIVEDDPEVARLIQMTLRSADYKYGIARNGNKTLQF-IPIFQPdvllldlmlpdm  59
            MK  +L+VEDD  + +LI+++L    YK   A+ G+ + +F +   QPD++LLDL LPD+
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEA-DFRLRTEQPDIILLDLGLPDI  59

Query  60   dgmdIIKQIRAANNNIPIIVISARDEDADKVQALDLGADDYLTKPFSIDELLARIRVSLR  119
            DG+ +I+Q+R   +  PIIVISAR E+   V+ LD GA+DY+TKPF+IDEL ARIRV+LR
Sbjct  60   DGLSLIQQFRDFVDT-PIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR  118

Query  120  RTNIIYNNGKTNINNYCNGELTINFDSQTVKVNQNEIHLTPIEYKVLIILAENTSRVLTH  179
             +     +  T  + + NG LTI+FD+++V VN++ +HLTP E+++L IL ++ ++VLT 
Sbjct  119  MSR----STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTY  174

Query  180  RYLLKEVWGTESVEDTSSLRVTIATLRKKI----EVNTQNQYIKTHIGVGYQMVQLD  232
            + LLK + G  +  + ++LRV +A+LRKK+    + NT+++ I TH  +GYQM +L+
Sbjct  175  QVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

124) KOX_14485 in NC_016612


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  132 bits (485),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 153/225 (68%), Gaps = 7/225 (3%)

Query  3    NVLIVEDENAIRRFLRTALEADGMRVFEAETLQRGLIEAATRKPDLTILDLGLPDGDGNA  62
             +L+VED++AI +++  AL  +  +V  A T + + +   T +PD+ +LDLGLPD DG +
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  63   FIREVRQWSQMPIIVLSARTEEQDKIAALDAGADDYLSKPFGIGELQARLRVAMRRHAGA  122
            +I++ R+  + PIIV+SARTEEQ  +  LD GA+DY++KPF I+EL+AR+RVA+R   ++
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  QADEPQVRFAD--IDVDIPARRIVRGEQEIHLTPIEFRLLAVLLNNPGKVLTQRQLLNQV  180
            ++ ++  RF++  + +D+ A+ ++  EQ +HLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--ADPARPQHL-LTETGIGYR  222
             G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

125) Rfer_2540 in NC_007908


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 98/231 (43%), Positives = 151/231 (66%), Gaps = 10/231 (4%)

Query  1    MTLRVLVVEDDREIRALMQSSLSVEGFEVQTAVSLSEASALLRHSPPDVIVLDLGLPDGD  60
            M   +LVVEDD  I  L++ +L+++ + V TA +  EA   LR   PD+I+LDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GVQLVREVRTRHSLPIVVVSARHQEAQKIQLLDAGADDYLTKPFSVGELLARIRVALR-H  119
            G+ L+++ R     PI+V+SAR +E   +++LD GA+DY+TKPF+++EL ARIRVALR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  120  RGTALAAAVTVHELDDLRIDLAAHSVLRNGEVLHLTPTEFKLLARLVRSAGRVVTHRQLL  179
            R+T    +   +  + L ID+ A SVL N + +HLTP EF+LL+ L +  G+V+T + LL
Sbjct  121  RSTETIQSRFTN--GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  180  LDVWGPEFTEHTHY--LRLYMAQLRAKIE--RDPAEPRHL-LTETGVGYRL  225
              + G  + +HT+   LR+ MA LR K++  +DP   + L +T+  +GY++
Sbjct  179  KSLYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

126) Closa_2943 in NC_014376


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 94/226 (42%), Positives = 150/226 (67%), Gaps = 7/226 (3%)

Query  8    ILVVEDDTQIRNFICYALKQEGFPYATASTAQNALSILVSQQIDLMLLDLGLPDFDGMEV  67
            +LVVEDD  I ++I  AL  + +   TA T+++A   L ++Q D++LLDLGLPD+DG+ +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  68   IKKVREWSEMPIIVVSARDQDKEKAAALDSGADDYLTKPFSATELMARIRVALRHLYKIG  127
            I++ R+  + PIIV+SAR +++     LD GA+DY+TKPF+  EL ARIRVALR     +
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM--SRS  122

Query  128  ITKTQTVLSVGGLSIDLEKHLVYLEGAVLHVTPLEYHLLTLFLRNPGKVLTTQYILKEIY  187
                Q+ ++ G L+ID++   V ++   +H+TP E++LLT++ ++ GKVLT Q +LK +Y
Sbjct  123  TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  188  GVGYGTDTQALRALMAGLRRKI----EPTPAKPRYILTEIGVGYRL  229
            G    T+  ALR  MA+LR+K+    +P   K + I+T+  +GY++
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEK-KLIITHPRIGYQM  227

127) SPPN_03625 in NC_015875


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  131 bits (481),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 102/240 (43%), Positives = 168/240 (70%), Gaps = 18/240 (7%)

Query  5    NVKILICEDDSSVNRLLSLAMEVEGYHYVSVRTGEEALRQIISQFpdlllldlglpdmdg  64
            +  +L+ EDD ++ +L+ +A+ ++ Y  V+ +TG EA  ++ ++ PD++LLDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  65   KDIIDKIRSFSQLPVIVVSARGEESDKIDALDAGADDYLTKPFSIDELFARLRVSLRRSK  124
              +I+++R F + P+IV+SAR EE   ++ LD GA+DY+TKPF+IDEL AR+RV+LR S+
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  125  QINQQSDGNSEKSSFTNGWLHVDFLSNRVFVNNQEIHLTPIEYKLLCLLSENVDRVLTYR  184
                    ++ +S FTNG L +DF ++ V+VN+Q +HLTP E++LL +L ++V++VLTY+
Sbjct  122  ------STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQ  175

Query  185  FIVKEIWGYYEE-DFSALRVFVNTLRKKIELGLGYS-------KMVQTHIGIGYRMIKIE  236
             ++K + GY ++ + +ALRV + +LRKK    L Y+       K++ TH  IGY+M  +E
Sbjct  176  VLLKSLYGYVNHTEMAALRVHMASLRKK----LNYTQDPNTEKKLIITHPRIGYQMQHLE  231

128) Clole_2250 in NC_015275


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  130 bits (478),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 102/230 (45%), Positives = 159/230 (70%), Gaps = 8/230 (3%)

Query  3    KTSILIVEDEQNICNFIATTLNAHEYKTLRCQTGKEALAIIPSHCpdlilldlglpdmdg  62
            KT++L+VED++ I ++I  +L  + YK +  +TGKEA   + ++ PD+ILLDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   lEVLTSVREWSSTPIIVISARSQEAEKVQALDLGADDYITKPFGTSELLARIRTAIRHSL  122
            L ++   R+   TPIIVISAR++E   V+ LD GA+DY+TKPF   EL ARIR A    L
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVA----L  117

Query  123  KISKTNQGANI-FKASDLTIDYDKHMLLVGDEKVHLTQIEFKLISLLAQHAGKVLTYDYM  181
            ++S++ +  +  F  + LTID+D   +LV ++ VHLT  EF+L+++L +H GKVLTY+ +
Sbjct  118  RMSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  182  IKKIWGPYAGSNNQILRVNMANIRRKIE--QNPG-DPKYIFTEVGIGYRM  228
            +K + G    ++   LRV+MA++R+K++  Q+P  + K I+T+  IGY+M
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

129) Clocel_1852 in NC_014393


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  129 bits (474),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 94/229 (42%), Positives = 147/229 (65%), Gaps = 9/229 (3%)

Query  3    KEKILIVDDEEHIVELIKYNLEAEEYKVLTAHDGIEAGKIAKKEKPSLILLDLMLPGISG  62
            K  +L+V+D+E I++LI   L  + YKV+TA  G EA+   + E+P +ILLDL LP+I G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   MEVCKKIRRDDEISEIPIIMLTAKSDELDKILGLELGADDYITKPFSIRELLARVKAVLR  122
            + + +++R   ++ + PII+++A+++E   +  L+ GA+DY+TKPF+I EL AR++  LR
Sbjct  62   LSLIQQFR---DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR  118

Query  123  RTNTVAVSTNSRF--GELTIDFSKYEVRKNDIKVDLTLKEFELLNILVKNRGKVLTRDVL  180
             + +   + +SRF  G LTIDF    V  N+  V+LT +EF+LL IL  + GKVLT +VL
Sbjct  119  MSRSTE-TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  181  LDKIWGYEYIGETRTVDVHIRHLRKKI---EDDDSSPKYIETIRGIGYR  226
            L  + GY    E  ++ VH+  LRKK+   +D ++  K I T   IGY+
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

130) MTES_1370 in NC_015125


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 124/185 (68%), Gaps = 6/185 (3%)

Query  42   GSHPDIVLLDLGMPHLDGVQVIQALRGWTSVPIIVVSGRTGSADKVDALDAGADDYVTKP  101
              +PDI+LLDLG+P++DG+ +IQ +R+    PIIV+S+RT     V+ LD GA+DY+TKP
Sbjct  44   TEQPDIILLDLGLPDIDGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKP  103

Query  102  FQIDELLARLRVHARRSAPASGEAVVRF--GSVEVDLAAKAVLRDGTRVHLTPTEWRMLE  159
            F+IDEL AR+RV A R + ++     RF  G++ +D+ AK+VL +   VHLTP E ++L 
Sbjct  104  FNIDELRARIRV-ALRMSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLT  162

Query  160  FLARNPGSLVTRQTLLKEIWASEQVADSGYLRLYMSQLRKKLE--ADPSNPVHLLTEQG-  216
            +L ++ G ++T Q LLK + +  + ++ + LR+ M+ LRKKL+   DP+    L+  +  
Sbjct  163  ILCHHVGKVLTYQVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPR  222

Query  217  MGYRL  221
            +GY++
Sbjct  223  IGYQM  227

131) Oant_3780 in NC_009668


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 93/231 (41%), Positives = 155/231 (68%), Gaps = 6/231 (2%)

Query  5    KLKILVVDDEPAIRKLLRVGLTTEGYTVVEAVNGGEADERITTEKPDIVVLDLGLPDTDG  64
            K  +LVV+D+ AI  L+ V+LT + Y VV A  G EAD R+ TE+PDI++LDLGLPD DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  65   HALLQRWRETGVTLPILVLSSRTDEAGIVRALEEGADDYVPKPFGMKElaarlrvalrhr  124
             +L+Q+ R+  V  PI+V+S+RT+E  IV  L+ GA+DY+ KPF + EL AR+RVALR  
Sbjct  62   LSLIQQFRDF-VDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  125  lqqqGEKPLFQSDGLTVDLVRRIVKLNGEEIKLSPKEYDILRLLVQHAGKVLTHHFILSQ  184
               +  ++ F ++ LT+D+  + V +N + + L+P+E+++L +L +H GKVLT + +L  
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  185  VWG--PAADVQYLRIYVRQLRQKIEKSPD---QPHYILTETGVGYRLREAD  230
            + G    +++  LR+ +  LR+K++ + D   +   I+T+  +GY++++ +
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

132) Anae109_3104 in NC_009675


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 94/225 (42%), Positives = 157/225 (70%), Gaps = 4/225 (1%)

Query  8    VLVVDDEAQVRRFLRAALGSRGFRLVEAETLREAEQLATSHNPDVYLLDLTLPDGDGVDL  67
            +LVV+D+  + +++  AL    +++V A T +EA+    +++PD+ LLDL LPD DG+ L
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  68   ARRLREWTRAPIIVLSARGREEDKVNALDAGADDYLTKPFGVNEllarlrvalrhaqaSP  127
             +++R+   +PIIV+SAR  E+  V+ LD GA+DY+TKPF ++EL AR+RVALR ++++ 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  AQPAVLEAGPLRIDLArrevtvegrevrLTPTEYRLLALLARHAGMVLTHRQILREVWG-  186
            +  + +  GPL ID+  + V V+ + V+LTP E++LL++L +H G VLT + +L+ + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  187  PNATEAHYVRVHMAELRKKIE--ADP-ARPRLLVTEPGVGYRLQD  228
             N TE   +RVHMA LRKK++   DP +  +L++T+P +GY++Q+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

133) Plav_0399 in NC_009719


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  129 bits (473),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 145/232 (63%), Gaps = 8/232 (3%)

Query  42   MKPSVMIVEDEEALLTLLQYNLDKEGYKVITAADGEEADLLIRETTPDLILLDWMLPGLS  101
            MK ++++VED+EA+L L++  L  + YKV+TA  G EAD+ +R   PD+ILLD  LP++ 
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  102  GIELCRRLRGRPETRNVPIIMITARGEETDRIRGLDIGADDYVTKPFSMTELLARIRAVM  161
            G+ L +++R+  +T   PII+I+AR EE   +  LD GA+DY+TKPF++ EL ARIR  +
Sbjct  61   GLSLIQQFRDFVDT---PIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVAL  117

Query  162  RRIRPALT-EDLVTFGDIVIDRAAHRVRRGDREVHLGPTEYRLLDHLIQHPGRVFSREQL  220
            R  R++ T +   T G + ID  A  V   ++ VHL P E++LL  L +H G+V++ + L
Sbjct  118  RMSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  221  LDTVWGSDVYVEARTVDVHVGRLRKALN----DKGEKDPIRTVRSAGYSLDE  268
            L ++ G     E  ++ VH++ LRK LN     + EK  I T    GY +++
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

134) kdpE in NC_016894


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 100/231 (44%), Positives = 161/231 (70%), Gaps = 10/231 (4%)

Query  4    KSVILIVEDEMGIANFIAAILKANDYKMIKAVTGKEAISMAASYSpdlilldlglpdidg  63
            K+ +L+VED+ +I ++I   L  N YK++ A TGKEA     +  PD+ILLDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   MDVLKTIRVWSNIPIVVVSARGHEREKVEALDLGADDYITKPFGTAELLARIRTGIRHSP  123
            + +++ +R   + PI+V+SAR +E+  VE LD GA+DY+TKPF   EL ARIR ++R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  124  KNRGADTLAMSCLVIGDLTIDYDKRVVTVAEKAIHLTPIEYKIMVLLSKNIGKVLTHDTI  183
             +R+++T+  S +  G LTID+D + V V E+++HLTP E++++ +L  ++GKVLT + +
Sbjct  119  MSRSTETIQ-SRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  184  IREVWGPYTN--EIQALRVNMANIRRKI---EENPAEPKYIVTQVGVGYRM  229
            ++ + G Y N  E+ ALRV+MA++R+K+   ++  +E K I+T+  +GY+M
Sbjct  178  LKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

135) AZC_1569 in NC_009937


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 93/224 (42%), Positives = 140/224 (63%), Gaps = 4/224 (1%)

Query  6    ILVVDDEPAIHRFLSPALTaagygvaraddaagalraiaTHPPDAVLLDLGLPDMDGKEV  65
            +LVV+D+ AI +++  ALT   Y V  A  +  A   + T+ PD +LLDLGLPD+DG  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  66   IGRVRQFSQVPIIVLSARDREAEKIEALDLGADDFVNKPFGVGELMARIRAALRQRGGDT  125
            I + R+F + PIIV+SAR  E   +E LD GA+D++ KPF ++EL ARIR ALR  +  T
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR-MSRST  123

Query  126  HAADVVLKVGPLEIDRPRHRVTRDGQEIKLTPKEFELLVYLARHPGRVLTHRQILGAVWG  185
            ++ +  +  GPL ID     V  + Q + LTP+EF+LL  L +H G+VLT + +L ++ G
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  186  PAHLDDTQYLRVYVGQLRQRLEVEPATPT---LILTEPGIGYRM  226
              +  +   LRV ++ LR++L+      T   LI+T+P IGY+M
Sbjct  184  YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

136) CLJU_c39510 in NC_014328


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  128 bits (467),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 96/231 (42%), Positives = 162/231 (71%), Gaps = 6/231 (2%)

Query  4    KPYILVIEDDRPIRNFITAALSSQGYKYIETDKGNEGISLVMSHNpdliildlglpdidg  63
            K  +LV+EDD +I ++I  AL+ + YK + +  G+E+   + +++PD+I+LDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   iEVIEKVRGWSNIPIIVVSARGNERQKVEALDKGADDYLTKPFSISELLARIRVSLRHLI  123
            + +I++ R+  + PIIV+SAR +E+  VE LD+GA+DY+TKPF+I EL ARIRV+LR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR---  118

Query  124  VNKDQHEILNNFKVKRLSIDFDKRRVTVEGKEIHLTPIEYKIMALLCKYSGKVLTHNFII  183
            +++  + I + F    L+IDFD + V V+ + +HLTP E++++++LC   GKVLT + ++
Sbjct  119  MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGSSLGSETKSLRVFMANLRRKIE--KDP-AQPEYIYTEVGVGYRLAD  231
            + + G    +E  +LRV MA+LR+K++  +DP ++   I T+  +GY++ +
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

137) Dhaf_4626 in NC_011830


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  126 bits (463),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 104/232 (45%), Positives = 161/232 (70%), Gaps = 12/232 (5%)

Query  4    KPLLLIVEDDEKISNFIAATLTANDYKVIRAAKGKDA-LSLTSSYSpdlilldlglpdld  62
            K  LL+VEDDE I ++I  +LT N YKV+ A  GK+A + L +   PD+ILLDLGLPD+D
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDID  60

Query  63   gTEVLKSLRQWTGIPIVVVSARGNEQEKVEALDLGADDYITKPFGTLELLARIRTAIRHS  122
            G  +++ +R+  + PI+V+SAR +EQ  VE LD GA+DY+TKPF   EL ARIR A+R S
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  123  QKNLMMSPGEQEKVTVGHLEIDYQKRRILLDGQEVHFTPIEYKIMVLLARNIGKVLTHDF  182
            +     +   Q + T G L ID++ + +L++ Q VH+TP E++++ +L +++GKVLT + 
Sbjct  121  RS----TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQV  176

Query  183  IMKEVWGPYTN--EIQALRVNMANIRRKIE--QNPG-EPRYIVTEVGVGYRM  229
            ++K + G Y N  E+ ALRV+MA++R+K++  Q+P  E + I+T+  +GY+M
Sbjct  177  LLKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

138) DSY4738 in NC_007907


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 104/232 (45%), Positives = 161/232 (70%), Gaps = 12/232 (5%)

Query  4    KPLLLIVEDDEKISNFIAATLTANDYKVIRAAKGKDA-LSLTSSYSpdlilldlglpdld  62
            K  LL+VEDDE I ++I  +LT N YKV+ A  GK+A + L +   PD+ILLDLGLPD+D
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDID  60

Query  63   gTEVLKSLRQWTGIPIVVVSARGNEQEKVEALDLGADDYITKPFGTLELLARIRTAIRHS  122
            G  +++ +R+  + PI+V+SAR +EQ  VE LD GA+DY+TKPF   EL ARIR A+R S
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  123  QKNLMLSPGEQEKVTVGHLEIDYQKRRILLDGQEVHFTPIEYKIMVLLARNMGKVLTHDF  182
            +     +   Q + T G L ID++ + +L++ Q VH+TP E++++ +L +++GKVLT + 
Sbjct  121  RS----TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQV  176

Query  183  IMKEVWGPYTN--EIQALRVNMANIRRKIE--QNPG-EPRYIVTEVGVGYRM  229
            ++K + G Y N  E+ ALRV+MA++R+K++  Q+P  E + I+T+  +GY+M
Sbjct  177  LLKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

139) MHY_04970 in NC_021041


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 100/233 (43%), Positives = 155/233 (67%), Gaps = 6/233 (2%)

Query  3    KPMILIVEDDAAVRNLISTTLKMQNYKFHVATTGSQALLEAVSNQpdimlldlglpdmdg  62
            K  +L+VEDD A+ +LI  +L M+ YK   A TG +A +   ++QPDI+LLDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VEIITKVRSWSNMPIIVISARCEDRDKIEALDAGADDYITKPFSVEEFLARLRVTIRRIN  122
            + +I + R   + PIIVISAR E++  +E LD GA+DY+TKPF+++E+ AR+RV++R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM--  119

Query  123  YVQTPHKENSIFVNGELKIDYVSGCAYCRGKELHLTPIEYKLLCLLAKNIGKVLTHTYIT  182
              ++ +  +S F NG L ID+ +       + +HLTP E++LL +L  ++GKVLT   + 
Sbjct  120  -SRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  183  REVWGNAWDNNVASLRVFMATLRKKIE-IDTANPE--YIQTHIGIGYRMLKLD  232
            + + G   + ++A+LRV MA+LRKK++  + +N E   I TH  IGY+M  L+
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

140) kdpE in NC_011000


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 151/226 (67%), Gaps = 6/226 (2%)

Query  7    TVVLIEDEKQIRRFVRAALEEEDIAVFEAETGKQGLIDAATRKPDLVIVDLGLPDTDGLD  66
            T++++ED+  I +++  AL  +   V  A TGK++ +   T +PD++++DLGLPD DGL 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  67   VIRELRGWSEVPVIVLSARTQEEEKVAALDAGADDYLTKPFGVSElrarmraqlrrrNQG  126
            +I+++R+  + P+IV+SART+E+  V  LD GA+DY+TKPF + ELRAR+R  LR     
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  127  GANESPKVTFGSVTVDLALRQVWRDDAIVHLTPLEYRLLATLVRHAGRVLTHRQLLRDVW  186
             + +S + T G++T+D+  + V  ++  VHLTP E++LL+ L +H G+VLT + LL+ + 
Sbjct  124  ETIQS-RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  187  G-PSHVESHHYLRIYMAHLRQKLE--ADP-AQPEHIVTETGVGYRL  228
            G  +H E    LR+ MA LR+KL+   DP ++   I+T+  +GY++
Sbjct  183  GYVNHTEMAA-LRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

141) GEM_1127 in NC_018513


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 152/226 (68%), Gaps = 6/226 (2%)

Query  7    TVVLIEDEKQIRRFVRAALEEEDIAVFEAETGKQGLIDAATRKPDLVIVDLGLPDTDGLD  66
            T++++ED+  I +++  AL  +   V  A TGK++ +   T +PD++++DLGLPD DGL 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  67   VIRELRGWSEVPVIVLSARTQEEEKVAALDAGADDYLTKPFGVSElrariraqlrrrNQG  126
            +I+++R+  + P+IV+SART+E+  V  LD GA+DY+TKPF + ELRARIR  LR     
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  127  GANESPKVSFGSVTVDLALRQVWRDGEIVHLTPLEYRLLATLVRHAGRVLTHRQLLRDVW  186
             + +S + + G++T+D+  + V  + + VHLTP E++LL+ L +H G+VLT + LL+ + 
Sbjct  124  ETIQS-RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  187  G-PSHVESHHYLRIYMAHLRQKLE--RDP-AQPEHIVTETGVGYRL  228
            G  +H E    LR+ MA LR+KL+  +DP ++   I+T+  +GY++
Sbjct  183  GYVNHTEMAA-LRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

142) RPE_4628 in NC_008435


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 95/233 (41%), Positives = 153/233 (66%), Gaps = 7/233 (3%)

Query  3    LKPRVLVVDDEPAILRFLKPALEANSYAMTSAATVAEAVKRIAAEAPDIVlldlgladgd  62
            +K  +LVV+D+ AIL+++  AL  N Y + +A T  EA  R+ +E PDI+LLDLGL+D D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  63   gkdVIRQVRSWSDVPIIVLSAREREVEKIDSLDLGADDYVNKPFNVGELMARMRTALRHR  122
            G  +I+Q R   D PIIV+SAR  E   ++ LD GA+DY+ KPFN++EL AR+R AL  R
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVAL--R  118

Query  123  MQRNAEP--ATLNVGGIEIDAVRRRVTRDGNELKLTPKEFDLLAFLARHAGRVVTHRQIL  180
            M R++E   + +  G + ID   + V  + + + LTP+EF+LL++L +H G+V+T + +L
Sbjct  119  MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  181  AAVWGPAHTSDTQYLRVYIGQLRQKI---EPRADEPQIILTEPGIGYRIGTLD  230
             ++ G  + ++   LRV ++ LR+K+   +    E ++I+T+P IGY++  L+
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

143) Dhaf_1587 in NC_011830


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  124 bits (455),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 158/225 (71%), Gaps = 5/225 (2%)

Query  6    TVLLIEDDRYISNFVAVSLKKEGYKVTVAESADEGLFLFTSNHPDMvlldlglpdkdglv  65
            T+L++EDD  I +++ V+L  + YKV  A ++ E+ F + +++PD++LLDLGLPD DGL 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  66   vIREIRGFSGTPILVVSAREQEKEKIEALDLGADDYITKPFHMGELLARIRAVKRRLQQQ  125
            +I+++R+F +TPI+V+SAR +E+  +E LD GA+DY+TKPF+++EL ARIR   R    +
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM--SR  121

Query  126  LAPPSLSVFSCDYLTVDYEKRKVLVDGNEVHLTPMEYKLLQLMIANKGKVLTHNYIVKEV  185
             +    S F+ + LT+D++ + VLV+ + VHLTP E++LL ++  + GKVLT + ++K +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  186  WGYSETGDTKTIRVFMANLRRKI---EKNIAKPRFILTEIGVGYR  227
             GY +  +  ++RV MA+LR+K+   +   +  ++I+T+  +GY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

144) DSY3761 in NC_007907


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  124 bits (455),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 158/225 (71%), Gaps = 5/225 (2%)

Query  6    TVLLIEDDRYISNFVAVSLKKEGYKVTVAESADEGLFLFTSNHPDMvlldlglpdkdglv  65
            T+L++EDD  I +++ V+L  + YKV  A ++ E+ F + +++PD++LLDLGLPD DGL 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  66   vIREIRGFSGTPILVVSAREQEKEKIEALDLGADDYITKPFHMGELLARIRAVKRRLQQQ  125
            +I+++R+F +TPI+V+SAR +E+  +E LD GA+DY+TKPF+++EL ARIR   R    +
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM--SR  121

Query  126  LAPPSLSVFSCDYLTVDYEKRKVLVDGNEVHLTPMEYKLLQLMIANKGKVLTHNYIVKEV  185
             +    S F+ + LT+D++ + VLV+ + VHLTP E++LL ++  + GKVLT + ++K +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  186  WGYSETGDTKTIRVFMANLRRKI---EKNIAKPRFILTEIGVGYR  227
             GY +  +  ++RV MA+LR+K+   +   +  ++I+T+  +GY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

145) O3I_031395 in NC_018681


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 153/226 (68%), Gaps = 4/226 (1%)

Query  26   VLVVDDEPQIVRALRINLSVRGYEVItagtggaalraaaDKHPDVVILDLGLPDIDGIEV  85
            +LVV+D+  I++ + + L++  Y V+TA TG  A       +PD+++LDLGLPDIDG+ +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  86   LAGLRGWTSAPVIVLSARTDSADKVEALDAGADDYVTKPFGMDEllarlraavrrgaTDT  145
            +  +R+   +P+IV+SART+    VE LD GA+DY+TKPF +DEL AR+R A+R + + T
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRS-T  123

Query  146  DASDPVVVTSSFTVDLAAKKVTKNDETVHLTPTEWGMLEMLVRNRGKLVGRKELLREVWG  205
            ++ ++    +++T+D+ AK V  N+++VHLTP E  +L +L ++ GK++  + LL+ + G
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  206  PSYATETHYLRVYLAQLRRKLE--DDPSHPKHL-LTEAGMGYRFQE  248
                TE   LRV +A LR+KL+  +DP+  K L +T++ +GY+ Q+
Sbjct  184  YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

146) ELI_1563 in NC_014624


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  124 bits (452),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 103/229 (45%), Positives = 162/229 (71%), Gaps = 10/229 (4%)

Query  4    KALVLLVEDEKGIRNFISTVLDVNNYRVVEARDGKEA-LELFTSRCpdlilldlglpdmd  62
            K+ +L+VED+ +I ++I   L +N Y+VV A+ GKEA + L T + PD+ILLDLGLPD+D
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQ-PDIILLDLGLPDID  60

Query  63   giEVLKTIRGWSGIPIIVVSARGHEREKVEALDLGADDYITKPFGTSELLARIRTAMRHQ  122
            G+ +++ +R+  + PIIV+SAR +E+  VE LD GA+DY+TKPF   EL ARIR A+R  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  123  QVTVDVPERTIFSVGDLTIDFDKRLVTLNNNPVHFTPIEYKILEILTQYPGKVVTYDQII  182
            + T  +  R  F+ G LTIDFD + V +N+++VH+TP E+++L IL +  GKV+TY+ ++
Sbjct  121  RSTETIQSR--FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  183  KDIWGPYTNENQ--TLRVNMANIRRKI---EKNPAEPKYILTEVGVGYR  226
            K + G Y N+ +  +LRV+MA++R+K+   +   +E K I+T+  +GY+
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

147) Snov_1546 in NC_014217


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  124 bits (452),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 95/226 (43%), Positives = 148/226 (66%), Gaps = 7/226 (3%)

Query  4    TSVLVVDDEPAIHRFMAPALAANGYDALRADTGTQALALVVNRRPDIVVLDLGLPDMDGK  63
            T++LVV+D+ AI +++  AL+ N Y  + A TG +A   +   +PDI++LDLGLPD+DG 
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  64   EVIRRLREWSDVPIVVLSARDREIEKIEALDLGADDFVNKPFGIGElmarlraalrHRMQ  123
             +I+++R+  D PI+V+SAR  E   +E LD GA+D++ KPF I+EL AR+R AL  RM 
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVAL--RMS  120

Query  124  EKGETPVLRL--GGIEVDIPRHRVTRDGAEVKLTPKEFDLVAFLARHPGKVLTHRQILRD  181
               ET   R+  G + +D+    V  +   V LTP+EF+L+++L +H GKVLT + +L+ 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  182  VWGPAHEHDTQYLRVYVGQLRTKLE--ADP-TNPALIVTEPGIGYR  224
            + G  ++ +   LRV ++ LR KL+   DP T+  LI+T+P IGY+
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

148) Bcep18194_A5611 in NC_007510


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  124 bits (452),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 151/226 (67%), Gaps = 6/226 (2%)

Query  7    TVVLIEDEKQIRRFVRAALEEEDIAVFEAETGKQGLIDAATRKPDLVIVDLGLPDTDGLD  66
            T++++ED+  I +++  AL  +   V  A TGK++ +   T +PD++++DLGLPD DGL 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  67   VIRELRGWSEVPVIVLSARTQEEEKVAALDAGADDYLTKPFGVSElrariraqlrrrNQG  126
            +I+++R+  + P+IV+SART+E+  V  LD GA+DY+TKPF + ELRARIR  LR     
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  127  GANESPKVTFGTVIVDLALRQVWRDNEIVHLTPLEYRLLATLVRHAGRVLTHRQLLRDVW  186
             + +S + T G + +D+  + V  +++ VHLTP E++LL+ L +H G+VLT + LL+ + 
Sbjct  124  ETIQS-RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  187  G-PSHVESHHYLRIYMAHLRQKLE--RDP-AQPEYIVTETGVGYRL  228
            G  +H E    LR+ MA LR+KL+  +DP ++   I+T+  +GY++
Sbjct  183  GYVNHTEMAA-LRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

149) CKL_2262 in NC_009706


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 101/229 (45%), Positives = 156/229 (69%), Gaps = 6/229 (2%)

Query  4    KPYILIVEDDKPIRNFIAAALSSQGYKYIETDKGKEAIALSMANNpdiiildlglpdidg  63
            K  +L+VEDD +I ++I  AL+ + YK + +  GKEA     +++PDII+LDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   iEVISKIRELSNIPIIIVSAREKERQKVEALDKGADDYLTKPFGIGELLARIRVSLRHSI  123
            + +I ++R++ + PII++SAR  E+  VE LD+GA+DY+TKPF I+EL ARIRV+LR S 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  SNEKENTAMHTFKVKQLFVDFDKRRVTVNDDEIHLTPIEYRIMELLCKYSGKVLTHNFIT  183
            S E  ++    F    L +DFD + V VN++ +HLTP E++++ +LC   GKVLT + + 
Sbjct  122  STETIQS---RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGTSLGNETQSLRVFMANLRRKLE--KDP-SQPEYIYTEVGVGYRL  229
            + + G     E  +LRV MA+LR+KL+  +DP ++   I T+  +GY++
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

150) CKR_1991 in NC_011837


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 101/229 (45%), Positives = 156/229 (69%), Gaps = 6/229 (2%)

Query  4    KPYILIVEDDKPIRNFIAAALSSQGYKYIETDKGKEAIALSMANNpdiiildlglpdidg  63
            K  +L+VEDD +I ++I  AL+ + YK + +  GKEA     +++PDII+LDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   iEVISKIRELSNIPIIIVSAREKERQKVEALDKGADDYLTKPFGIGELLARIRVSLRHSI  123
            + +I ++R++ + PII++SAR  E+  VE LD+GA+DY+TKPF I+EL ARIRV+LR S 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  SNEKENTAMHTFKVKQLFVDFDKRRVTVNDDEIHLTPIEYRIMELLCKYSGKVLTHNFIT  183
            S E  ++    F    L +DFD + V VN++ +HLTP E++++ +LC   GKVLT + + 
Sbjct  122  STETIQS---RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGTSLGNETQSLRVFMANLRRKLE--KDP-SQPEYIYTEVGVGYRL  229
            + + G     E  +LRV MA+LR+KL+  +DP ++   I T+  +GY++
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

151) Acid_0071 in NC_008536


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  123 bits (451),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 145/227 (64%), Gaps = 8/227 (3%)

Query  4    AKILVVDDDPQIRRVMKATLVGHSYEVIEARTGEDALEALPHEMPNLVLLDMNMPGMGGL  63
            + +LVV+DD  I +++  +L  + Y V+ A+TG +A   L  E P+++LLD+ +P+++GL
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  64   ETCRAIRSGTDIPVIILSVRNTEKDKVAALDAGADDYVTKPFGieellariraalrrSPS  123
               + +R   D P+I++S R  E+  V  LD GA+DY+TKPF I+EL ARIR ALR S S
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRS  122

Query  124  GPDGGPHGFTASNLEIDFDARRVHANGKDVRLTPKEFEMLRYLVAHSGRPVTHRELLQAV  183
              +     FT + L IDFDA+ V  N + V+LTP+EF++L  L  H G+ +T + LL+++
Sbjct  123  -TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  184  WGPDYGDEPEY--LRVFINQLRKKI---EANPSKPKFILTEPWVGYR  225
             G  Y ++ E   LRV +  LRKK+   +   +  K+I+T+P++GY+
Sbjct  182  YG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

152) Acel_1196 in NC_008578


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 153/226 (68%), Gaps = 6/226 (2%)

Query  2    ASVLVVDDEPAIVRALRINLTARGYEVYTAFDGR-TALQLVTAHKPDLMILDLGLPDMDG  60
            +++LVV+D+ AI++ + + LT   Y V TA  G+ + ++L T + PD+++LDLGLPD+DG
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQ-PDIILLDLGLPDIDG  61

Query  61   IDVIGGVRGWSTMPILVLSARDQEAQKVKALDAGADDYVTKPFGMDEllarlrasirrar  120
            + +I   R+    PI+V+SAR +E   V  LD GA+DY+TKPF +DEL AR+R ++R +R
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  121  PTSA-EPRIITPDFTIDLADKTVRRGDEPIRLTPTEWHILDILARHAGRLVTTRQLLHDV  179
            +T + ++R+    +TID+  K+V   +++++LTP E ++L IL +H G+++T + LL  +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  180  WGPTYRNETHYLRVYMAQLRRKLE--PDP-AHPRYLRTEPGIGYRL  222
             G   + E   LRV MA LR+KL+   DP ++ + + T+P IGY++
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

153) kdpE in NC_017538


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 95/229 (42%), Positives = 154/229 (68%), Gaps = 6/229 (2%)

Query  7    KILVVDDEPPIRKLLRVGLTAEGYAMVEAVNGEEAAALITEEKpdlilldlglpdiSGHD  66
             +LVV+D+ +I  L+ V+LT + Y +V A  G EA   +  E+PD+ILLDLGLPDI G  
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  67   LLERWRAELVELPIVVLSSRTDETGIVKALELGADDYLTKPFGMRELAARIRVALRHKLQ  126
            L+++ R ++V+ PI+V+S+RT+E  IV  L+ GA+DY+TKPF + EL ARIRVALR    
Sbjct  64   LIQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRS  122

Query  127  QQGERPIFQVGDLSVDLVKRIVKVADKEVKLSPKEYEILRVLVQHAGKVITHQHILKHVW  186
             +  ++ F  G L++D+  + V V ++ V L+P+E+++L +L +H GKV+T Q +LK + 
Sbjct  123  TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  187  G--GSTDVQYLRVYVRQLRQKIEATPD---QPQYILTETGVGYRLREPE  230
            G    T++  LRV +  LR+K++ T D   + + I+T+  +GY++++ E
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

154) OCAR_4179 in NC_011386


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 95/229 (42%), Positives = 154/229 (68%), Gaps = 6/229 (2%)

Query  7    KILVVDDEPPIRKLLRVGLTAEGYAMVEAVNGEEAAALITEEKpdlilldlglpdiSGHD  66
             +LVV+D+ +I  L+ V+LT + Y +V A  G EA   +  E+PD+ILLDLGLPDI G  
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  67   LLERWRAELVELPIVVLSSRTDETGIVKALELGADDYLTKPFGMRELAARIRVALRHKLQ  126
            L+++ R ++V+ PI+V+S+RT+E  IV  L+ GA+DY+TKPF + EL ARIRVALR    
Sbjct  64   LIQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRS  122

Query  127  QQGERPIFQVGDLSVDLVKRIVKVADKEVKLSPKEYEILRVLVQHAGKVITHQHILKHVW  186
             +  ++ F  G L++D+  + V V ++ V L+P+E+++L +L +H GKV+T Q +LK + 
Sbjct  123  TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  187  G--GSTDVQYLRVYVRQLRQKIEATPD---QPQYILTETGVGYRLREPE  230
            G    T++  LRV +  LR+K++ T D   + + I+T+  +GY++++ E
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

155) kdpE in NC_015684


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 95/229 (42%), Positives = 154/229 (68%), Gaps = 6/229 (2%)

Query  7    KILVVDDEPPIRKLLRVGLTAEGYAMVEAVNGEEAAALITEEKpdlilldlglpdiSGHD  66
             +LVV+D+ +I  L+ V+LT + Y +V A  G EA   +  E+PD+ILLDLGLPDI G  
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  67   LLERWRAELVELPIVVLSSRTDETGIVKALELGADDYLTKPFGMRELAARIRVALRHKLQ  126
            L+++ R ++V+ PI+V+S+RT+E  IV  L+ GA+DY+TKPF + EL ARIRVALR    
Sbjct  64   LIQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRS  122

Query  127  QQGERPIFQVGDLSVDLVKRIVKVADKEVKLSPKEYEILRVLVQHAGKVITHQHILKHVW  186
             +  ++ F  G L++D+  + V V ++ V L+P+E+++L +L +H GKV+T Q +LK + 
Sbjct  123  TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  187  G--GSTDVQYLRVYVRQLRQKIEATPD---QPQYILTETGVGYRLREPE  230
            G    T++  LRV +  LR+K++ T D   + + I+T+  +GY++++ E
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

156) Cbei_2028 in NC_009617


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  122 bits (446),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 93/231 (41%), Positives = 152/231 (66%), Gaps = 6/231 (2%)

Query  4    KPYILVVEDDRPIRNFIAASLKTQGFNYIETDKGVEAVALTMSHKpdliildlglpdidg  63
            K  +LVVEDD +I ++I  +L  + ++ + +  G EA     +++PD+I+LDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   vdvITRVREWSKVPIIIVSARENERQKIEALDKGADDYLTKPFGIGELLARIRVSLRHSR  123
            + +I + R+    PII++SAR +E+  +E LD+GA+DY+TKPF I+EL ARIRV+LR SR
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  AITNEKENAEIFKVKGLTVDFSKRKVTIDNEDIHLTPIEYKIMALLCKYAGKVLTHNFII  183
            +    +     F    LT+DF  + V ++++ +HLTP E++++++LC   GKVLT + ++
Sbjct  122  STETIQSR---FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  NEIWGAAVGNETQSLRVFMASLRRKI---EKNPAEPKYIYTEVGVGYRLAD  231
            + + G     E  +LRV MASLR+K+   +   +E K I T+  +GY++ +
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

157) EUBELI_20165 in NC_012780


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  121 bits (442),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 107/230 (47%), Positives = 157/230 (69%), Gaps = 7/230 (3%)

Query  3    KTQILVVEDDSPIRNLITTTLKTNNYRYLTAVNGESAISQTASHNpdiilldlglpdidg  62
            KT +LVVEDD +I +LI  +L  N Y+ +TA  G  A  +  +++PDIILLDLGLPDIDG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   VEVIKKIRTWTNTPIIVISARTEDADKIEALDAGADDYLTKPFSVDEllarlrvtvrrls  122
            + +I+++R   +TPIIVISARTE+   +E LD GA+DY+TKPF++DEL AR+RV++R   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  lMQTDMTQNTSVFENGDLKIDYAAGCAYLNGEELHLTPIEYKLLILLSRNVGRVLTYTYI  182
              +T  ++    F NG L ID+ A    +N + +HLTP E++LL +L ++VG+VLTY  +
Sbjct  122  STETIQSR----FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  183  TKNIWGSSWENDLASLRVFMATLRKKI---EKDVNSPQYIQTHIGIGYRM  229
             K++ G   + ++A+LRV MA+LRKK+   +      + I TH  IGY+M
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

158) Rsph17025_3787 in NC_009429


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  120 bits (439),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 97/229 (43%), Positives = 146/229 (64%), Gaps = 4/229 (1%)

Query  1    MSGHILIVDDEMPIRRLLRVAIERSGYATIEADCGAAALDALRRSVPKlvlldlglpdrd  60
            M   +L+V+D+ +I +L+ VA+  + Y  + A  G  A   LR   P ++LLDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   glelIGAFREKL-VPIIVLTAREASSEKVAALDLGADDYVTKPFDSEELMARIRSCLRRA  119
            GL LI  FR+ +  PIIV++AR      V  LD GA+DY+TKPF+ +EL ARIR  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  120  DQSHGHLRKLTVGPVTIDLDAHGAWMNGAEAKLTPKEFTLLAVLASHPGKVLTHTHLLRE  179
              ++    ++T GP+TID+DA +  +N     LTP+EF LL++L  H GKVLT   LL+ 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  180  VWGPAHTDHVEYLRVTVRSLRKKLE--EDPSAP-RLIQNEPGVGYRLRD  225
            + G  +  ++  LRV + SLRKKL+  +DP++  +LI  +P +GY++++
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

159) H681_10025 in NC_020829


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 92/227 (41%), Positives = 155/227 (69%), Gaps = 3/227 (1%)

Query  6    ATILVVDDEPQIRKFLRISLSAGGYKVLEAGTGEEGLAQAALGRpdlvvldlglpdkdgQ  65
            +T+LVV+D+  I  ++ ++L+   YKV+ A TG E+  +    +PD+++LDLGLPD DG 
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  66   DVLRELREWSQVPVLVLSVRASESEKVLALDSGANDYVTKPFGIQEFLARIRVLLRQGGS  125
             +++++R+  + P++V+S R+ E   V  LD GANDY+TKPF I+E+ ARIRV LR + S
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRS  122

Query  126  GETQEVLVAVGPLSVDFSYRRVLLDGAEVSLTRKEYAVLSTLARHVGRVVTQQQLLKDIW  185
             ET +   + GPL++DF  + VL++   V LT +E+ +L+ L +HVG+V+T Q LLK + 
Sbjct  123  TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  186  GPTHTEDTHYLRVVVGHLRQKL--ADDPATP-RFIVTEAGVGYRLRE  229
            G  +  +   LRV ++ LR+KL  ++DP T  ++I+T++ +GY++++
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

160) kdpE in NC_018000


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  119 bits (436),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 95/232 (41%), Positives = 152/232 (66%), Gaps = 6/232 (2%)

Query  4    LNVKILVVDDEPAIRKLLRVGLTSEGYAVIEAVNAKDAISLVAKEQpdlilldlglpdMA  63
            ++  +LVV+D+ AI  L+ V+LT + Y V+ A  +K+A   +  EQPD+ILLDLGLPD+ 
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  64   GHDLLAKWRSDAVELPIVVLSSRTDETGIVKALEIGADDYVTKPFGMKELAARIRVALRH  123
            G  L+ + R D V+ PI+V+S+RT+E  IV  L+ GA+DY+TKPF + EL ARIRVALR 
Sbjct  61   GLSLIQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM  119

Query  124  RLQQQGERAIFKTGELSVDLVKRIVKVADKEVKLSPKEYDILRILVQYAGKVITHQHLLN  183
                +  ++ F  G L++D+  + V V ++ V L+P+E+++L IL +  GKV+T Q LL+
Sbjct  120  SRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  184  QIWG--GSTDVQYLRVYVRQLRQKIERIPD---QPQYITTETGVGYRLREAE  230
             + G    T++  LRV +  LR+K++   D   + + I T+  +GY++++ E
Sbjct  180  SLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

161) ANT_09260 in NC_014960


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  118 bits (432),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 92/226 (41%), Positives = 156/226 (70%), Gaps = 6/226 (2%)

Query  8    ILVVDDERAIRRYLRTSLTALGYEVLEAATGNEALQSAMTEHpdilildlglpdidgVEV  67
            +LVV+D+ AI + +  +LT   Y V+ A TG+EA     TE+PDI++LDLGLPDIDG+ +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  68   VRRIREWSNVPILILSVRDREDDKVVALDAGADDYLTKPFGIKELLARIRVAIR-HRTPD  126
            ++++R+  + PI+++S R  E+  V  LD GA+DY+TKPF I EL ARIRVA+R  R+ +
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  127  QQDTVFEVEDLRVDLGKREVFVQGNRVALTPTEYDLIKVLVQHAGRVLTHNQLLRQVWGP  186
              ++ F    L +D++ + V+V+ + V LTP E++L+ +L +H G+VLT + LL+ + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  187  AYENEAHLLRVNISNLRRKI----EPNPDQPRYILTEPGVGYRLRE  228
              + E   LRV++++LR+K+    +PN ++ + I+T+P +GY++++
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEK-KLIITHPRIGYQMQH  229

162) kdpE in NC_009142


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  118 bits (430),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 149/232 (65%), Gaps = 14/232 (6%)

Query  2    TRVLVVDDEPQLLRALRINLTARGYEVLTAVDGKAA---LRAAGDGKPDAVVLDLGLPDM  58
            T +LVV+D+  +L+ + + LT   Y V+TA  GK A   LR+    +PD ++LDLGLPD+
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRT---EQPDIILLDLGLPDI  59

Query  59   DGSEVIAGLRGWTTVPIIVLSARTDSTDKVHALDAGADDYVTKPFGMDEllarlraavrr  118
            DG  +I  +R+    PIIV+SART+    V+ LD GA+DY+TKPF +DEL AR+R A+R 
Sbjct  60   DGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM  119

Query  119  aNTADREDQPVVETATFSVDLAAKKVRREGAEVHLTPTEWGMLEVLVRNKGRLVGQKQLL  178
            + +++   Q+    + +++D+ AK V  +   VHLTP E  +L +L ++ G+++  + LL
Sbjct  120  SRSTE-TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  179  KDVWGPAYANETHY--LRVYLAQLRRKLE--ADPSRPRHL-ITEAGMGYRFE  225
            K + G  Y N+T+   LRV +A LR+KL+   DP+  + L IT++ +GY+ +
Sbjct  179  KSLYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQ  228

163) DHBDCA_p2256 in NC_018866


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  117 bits (427),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 96/231 (42%), Positives = 154/231 (67%), Gaps = 10/231 (4%)

Query  4    KSLLLIVEDDEKICNFISAILTSNDYQIIRTARGKEAVSMAASYSpdlilldlglpdmdg  63
            K+ LL+VEDDE I ++I   LT N Y+++ +  GKEA     +  PD+ILLDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   VEVLRTIRQWSGIPIIVVSARGQEREKVEALDLGADDYLTKPFGTSELLARIRTGIRHSQ  123
            + +++ +R+  + PIIV+SAR +E+  VE LD GA+DY+TKPF   EL ARIR ++R S+
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  KNVSVSFPESEKMTVGDLEINYQKRLVSMAGKEIHLTPIEYKIIVLLSKNTGKVLTHDFI  183
               ++      + T G L I+++ + V +  + +HLTP E++++ +L  + GKVLT + +
Sbjct  122  STETI----QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  184  MKEIWGPYTN--EIQALRVNMANIRRKLEINP---AEPRYILTEVGVGYRM  229
            +K + G Y N  E+ ALRV+MA++R+KL+      +E + I+T+  +GY+M
Sbjct  178  LKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

164) DCF50_p2266 in NC_018867


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  117 bits (427),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 96/231 (42%), Positives = 154/231 (67%), Gaps = 10/231 (4%)

Query  4    KSLLLIVEDDEKICNFISAILTSNDYQIIRTARGKEAVSMAASYSpdlilldlglpdmdg  63
            K+ LL+VEDDE I ++I   LT N Y+++ +  GKEA     +  PD+ILLDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   VEVLRTIRQWSGIPIIVVSARGQEREKVEALDLGADDYLTKPFGTSELLARIRTGIRHSQ  123
            + +++ +R+  + PIIV+SAR +E+  VE LD GA+DY+TKPF   EL ARIR ++R S+
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  124  KNVSVSFPESEKMTVGDLEINYQKRLVSMAGKEIHLTPIEYKIIVLLSKNTGKVLTHDFI  183
               ++      + T G L I+++ + V +  + +HLTP E++++ +L  + GKVLT + +
Sbjct  122  STETI----QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  184  MKEIWGPYTN--EIQALRVNMANIRRKLEINP---AEPRYILTEVGVGYRM  229
            +K + G Y N  E+ ALRV+MA++R+KL+      +E + I+T+  +GY+M
Sbjct  178  LKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

165) Geob_2989 in NC_011979


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 95/226 (43%), Positives = 154/226 (69%), Gaps = 8/226 (3%)

Query  11   ILIVDDEPAIQRFLQTALDTGEFSLHKADDGHSALAAAVATRpdiilldlglpdmdgVEV  70
            +L+V+D+ AI ++++ AL    + +  A  G  A     + +PDIILLDLGLPD+DG+ +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  71   IRRVREWSQVPIIVLSVREREDDKVKALDAGADDYVTKPFGIPELLARMRVALRRS-LQE  129
            I++ R+  + PIIV+S R  E+  V  LD GA+DY+TKPF I EL AR+RVALR S   E
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  130  VVEPVFRSGGLEVDLHLRKVKVQEEDVQVTPTEYDLLRLLVTHAGRVLTHAHLLKQIWGV  189
             +++ F +G L +D++ + V V+E+ V++TP E++LL +L  H G+VLT   LLK +   
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY--  182

Query  190  GYVEQPHV--LRVNISNLRHKIE--KDPSRP-RYIITEPGVGYRLK  230
            GYV++ ++  LRV++++LR K++  +DP+   + IIT+P +GY+++
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQ  228

166) Closa_4110 in NC_014376


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  116 bits (424),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 95/234 (41%), Positives = 161/234 (69%), Gaps = 10/234 (4%)

Query  3    IKPTVLIIEDEDAICNFISAILSSNGYQVVKAKTGKEGLSLFTSHVpdlilldlglpdid  62
            +K T+L++ED++AI ++I   L+ N Y+VV AKTGKE+   + ++ PD+ILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  63   gieilKNLRQWSKTPVIVVSARGYEREKVAALDFGADDYIVKPFGTSELLARIRTAMRHS  122
            G+ +++++R+   TP+IV+SAR  E+  V  LD GA+DY+ KPF   EL ARIR A+R S
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  123  PQAAGTEVWGEEKVTIGKLAIDYGKRTVYKAGEKIHLTPIEYKLLVLLSKNAGKVLTHDF  182
              +   + +     T G L+ID++ ++V    + +HLTP E++LL +L  + GKVLT + 
Sbjct  121  RSTETIQSR----FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQV  176

Query  183  IIREIWGVYTEESH--TLRVNMANIRRKIE--ANPGAP-QYILTEMGVGYRMAE  231
            +++ + G Y ++++  +LRV+MA++R+K++   +P +  + I+T+  +GY+M +
Sbjct  177  LLKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

167) GM18_0099 in NC_014973


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 92/227 (41%), Positives = 151/227 (67%), Gaps = 10/227 (4%)

Query  13   VLVIDDEVAIQRFLKTALDTGDYSvhlagtghaglaaavavRPDVIlldlglpdldgMEV  72
            +LV++D+ AI +++  AL    Y V  A TG  +     + +PD+ILLDLGLPD+DG+ +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  73   IRRVREWSRVPIIVISVREREDEKVQALDSGADDYLTKPFGIGELLARIKVALRRS-LQQ  131
            I++ R+    PIIVIS R  E+  V+ LD GA+DY+TKPF I+EL ARI+VALR S   +
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  132  APEPVFEVGELRVDLPHRRVSVRGEEVQLTPTEYELLRMLVTHAGKVLTHSQILKQIWGV  191
            + ++ F  G L +D+  + V V  + V+LTP E++LL +L  H GKVLT   +LK + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG-  183

Query  192  AYLEQPHV--LRVNISNLRHKI----EPDASRPRYILTEAGVGYRLK  232
             Y+++ ++  LRV++++LR K+    +P++ + + I+T++ +GY+++
Sbjct  184  -YVNHTEMAALRVHMASLRKKLNYTQDPNTEK-KLIITHPRIGYQMQ  228

168) Amet_3307 in NC_009633


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  116 bits (424),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 94/229 (42%), Positives = 159/229 (70%), Gaps = 7/229 (3%)

Query  6    KLLIIEDDKYILNFISLSLKTSGYAFETARTGLEGMSLFYSHHpdiilldlglpdidgid  65
             LL++EDD  IL++I ++L  + Y   TA+TG E+   + +++PDIILLDLGLPDIDG+ 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  66   VIKSIRMISQVPILIVSARGQENEKIAALDEGADDYITKPFHMGELMARIRVVQRKLKKA  125
            +I+ +R + + PI+++SAR +E+  +  LD GA+DY+TKPF+++EL ARIRV    L+ +
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVA---LRMS  120

Query  126  MQPENIEI-FQMDYLTIDYEKRIVLVDNNEVHVTPIEYKLLLLLVANKGKVLTHNYILKE  184
               E I+  F  + LTID++ + VLV+++ VH+TP E++LL +L  + GKVLT + +LK 
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  185  IWGYGETGDSKSIRVFMANLRRKI---EKDKASPRFILTEVGVGYRFAN  230
            + GY +  +  ++RV MA+LR+K+   +  ++  ++I+T+  +GY+  +
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

169) kdpE in NC_011988


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 93/222 (42%), Positives = 144/222 (65%), Gaps = 3/222 (1%)

Query  6    ILVVDDEPQILRFLRPALAAAGYEVIEADTGKQALALVATAVpdllildlglpdmdgKEV  65
            +LVV+D+  IL+++  AL+   Y V+ A TGK+A   + T  PD+++LDLGLPD+DG  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  66   IAQLRHWNPIPIIVLSARDREVEKIAALDLGADDYLEKPFGIGELTARIRVALRHKPQAE  125
            I Q+R+    PIIV+SAR  E   +  LD GA+DY+ KPF I+EL ARIRVALR    +E
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  126  PAPSIIRSGELVIDIDHRLVTRADQPVKLTPKEYDLLRLLATHAGRVLTHGALLKEVWGP  185
               S + +G L ID+D + V   +Q+V LTP+E++LL +L  H G+VLT   LLK + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  186  AHAHDLQYLRVFIRQIRAKI---EKDESQPAIILTEAGVGYR  224
             +  ++  LRV +  +R K+   +  +++  +I+T++ +GY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

170) A1S_2137 in NC_009085


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 71/175 (41%), Positives = 116/175 (67%), Gaps = 4/175 (2%)

Query  1    MILDLGLPDLDGKEVLQELRSWSNVPVIVLSVRADEYEKVALLDAGANDYMTKPFSVQEL  60
            ++LDLGLPD+DG  ++Q++R   + P+IV+S R++E   V +LD GANDYMTKPF+++EL
Sbjct  50   ILLDLGLPDIDGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDEL  109

Query  61   LARIRVILR-NQPIQQEAHIYDDGYLKVDVTQRLVWIEQQPITLTRKEFQLLALLMRYQG  119
             ARIRV LR +++ +     + +G L +D   + V +++Q++ LT +EFQLL++L +  G
Sbjct  110  RARIRVALRMSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVG  169

Query  120  QLLTQPQLLKELWGPTHQEDTHYLRILVGKLRSKLG---DNAIQPRYIATEPGVG  171
            ++LT   LLK L G  ++ +   LR+ ++ LR KL    D   + + I T+P +G
Sbjct  170  KVLTYQVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIG  224

171) Cphy_0742 in NC_010001


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  114 bits (417),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 95/232 (41%), Positives = 154/232 (67%), Gaps = 9/232 (3%)

Query  2    KNTTILIIEDEQNICNFIATNLNAYDYRVLKSFTGAEGLSIITSHCpdlilldlglpdid  61
             +TT+L++ED++ I ++I   L    Y+V+ + TG E+   + ++ PD+ILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  62   gMEIISKIRSWSTIPIIVISARTQEKEKVQALDLGADDYITKPFGTSELLARIRTALRHN  121
            G+ +I ++R     PIIVISART+E+  V+ LD GA+DY+TKPF   EL ARIR ALR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  ASLESGKNFPPSIFRAKDFVIDFNKHIVMVGGKDVHLTQIEFKLVSLLANNSGRVMTYDS  181
             S E+ +    S F    + IDF+   V+V  + VHLT  EF+L+++L ++ G+V+TY+ 
Sbjct  121  RSTETIQ----SRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQV  176

Query  182  IITKIWGPYADRNN-QILRVNMANIRRKI---EANPADPQYIFTEVGIGYRM  229
            ++  + G Y ++ +   LRV+MA++R+K+   +   ++ + I+T+  IGY+M
Sbjct  177  LLKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

172) ZPR_1366 in NC_014041


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 92/227 (41%), Positives = 152/227 (67%), Gaps = 4/227 (1%)

Query  3    NPKILIIDDEPQIRKLLQINLESNDYKVFEAGTAKEGILLAARYTpdlilldiglpdKNG  62
            +  +L+++D+  I  L+++ L  N YKV  A T+KE+ +      PD+ILLD+GLPD +G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   HQVLQELRQWFNNPILILSVQDNEADIVSALDNGATDYLTKPFRTGELLARIRSAIRNSQ  122
              ++Q++R+  + PI+++S + +E  IV  LD GA DY+TKPF  +EL ARIR A+R S+
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  NTDN-NAILTTGDISIDFVARIIKVREHIIKLTSTEYELLFLLARNEGKVLTHHYLLRKV  181
            +T+  ++ +T G ++IDF A+ + V E+ + LT+ E++LL +L ++ GKVLT + LL+ +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  182  WGPSFQLETQYLRVFIGNLRKKIE--ANPNHPKH-IITESGIGYRFQ  225
             G   + E   LRV +++LRKK++   +PN  K  IIT++ IGY+ Q
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQ  228

173) Fluta_0551 in NC_015321


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  113 bits (412),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 92/225 (41%), Positives = 149/225 (67%), Gaps = 4/225 (1%)

Query  3    KAEILIIDDEPHIRKLLEINLESNDYKVSMAETGQEGLLKAVNHppdliildlglpdKNG  62
            K+ +L+++D+  I  L+++ L  N YKV  A TG+E+ ++   + PD+I+LDLGLPD +G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   HIVLKELREWYGKPIIILSAQNEEESIVKALDNGANDYLTKPFRSQELLARIRSGIRHS-  121
              +++++R+  + PII++SA+ EE++IV  LD GANDY+TKPF  +EL ARIR ++R S 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  122  ESQTVITTMEFGDIELDLTARVVKKRGQEVKLTFTEYSLLVLLAKYAGKVLTHQFILKEV  181
             ++T+ +    G + +D+ A+ V    Q V LT  E+ LL +L    GKVLT Q +LK +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  182  WGPGYQMETQYLRVFVAQIRKKIE--ENPNDPKHL-LTESRVGYR  223
             G   + E   LRV +A +RKK++  ++PN  K L +T++R+GY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

174) Sulba_1521 in NC_018002


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 148/223 (67%), Gaps = 6/223 (2%)

Query  7    ILLVEDDDAIGKILQISLEEFGYKTRLAKDIIHAKREWITQNPSllildiglpdgdgKSL  66
            +L+VEDD+AI  +++++L    YK   AK   +A     T++P +++LD+GLPD DG SL
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  67   ISFIRQKSQTPIIVLSARSDEKEIIAALDMGADDYVTKPFSTHELLARVRSTLRRT-TQE  125
            I  +R+  +TPIIV+SAR++E+ I+  LD GA+DY+TKPF+ +EL AR+R +LR + + E
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  126  NVPNTLTCKELTIDFTCKEVLLNGTLLKLTPTEYHLLSFLMQNANKVLPHQHILKTIWGV  185
             + + +T   LTIDF  K VL+N   + LTP E++LL++L ++  KVL  Q +LK++ G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  186  GYQNQMQYLRTYINTLRKKI----EKNPSRPLYITTEASIGYR  224
              + +M  LR  + +LRKK+    + N  + L I T++ IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKL-IITHPRIGYQ  226

175) Emtol_0934 in NC_018748


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 93/227 (41%), Positives = 160/227 (71%), Gaps = 8/227 (3%)

Query  3    NPTILIIDDEVQIRKLLEITLSANNFRVYEASTGKEGQISAAMHppdlilldlglpdEDG  62
            + T+L+++D+  I  L++++L+ N ++V  A TGKE+++    + PD+ILLDLGLPD DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   QSILKRLREWYKAPVIILSVRDNEDDIIQALDSGANDYLTKPFRTGEllarirtalrlaQ  122
             S+++++R+   +P+I++S R +E+ I++ LD GANDY+TKPF  +EL ARIR ALR+++
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  NTENVPLR-EYGNLSIDFTSRIVKKNQEVLKLTTTEYQLLVLMAQNESRVLTHQFLLKTI  181
            +TE +  R   G L+IDF ++ V  N++ + LT  E+QLL ++ ++ ++VLT Q LLK++
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  182  WGPSYLEQSQY--LRVFVRQLRKKI---EDNPDQPKYIITESGVGYR  223
             G  Y+++++   LRV +  LRKK+   +D   + K IIT++ +GY+
Sbjct  182  YG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

176) Haur_2274 in NC_009972


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  112 bits (408),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 95/226 (43%), Positives = 153/226 (68%), Gaps = 5/226 (2%)

Query  6    NVLVIEDEAPIRRFLRASLPSHGYHLIEAENGEDGLLQAAMQRPAiiildlglpdldglQ  65
             +LV+ED+ +I +++  +L  + Y ++ A  G ++ ++   ++P II+LDLGLPD+DGL 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  66   VTQRLREWTNTPIIVLSARGREDDKIAALDAGADDYLTKPFGMGEllarlrvalrhlhQH  125
            + Q++R+  +TPIIV+SAR  E+  +  LD GA+DY+TKPF ++EL AR+RVALR    +
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM--SR  121

Query  126  GGEKGEPVFQVGALRVDLVRRQVFVAEQEVHLTPNEYNLLTTLVQHAGKVMTHRQLLREV  185
            + E  ++ F  G+L +D+  + V+V EQ VHLTPNE++LLT L +H GKV+T + LL+ +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  186  WGPAYTEENHYLRVYMGQLRHKLE--ADP-ARPRYLLTEPGVGYRL  228
             G     E   LRV M+ LR KL+   DP +  + ++T+P +GY++
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

177) Mahau_2862 in NC_015520


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  112 bits (407),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 97/232 (42%), Positives = 157/232 (68%), Gaps = 10/232 (4%)

Query  1    MNPLILIVDDEKSIRHFIKVALETQSYRCMEAENGL-TAISLAASYSpdimildlglpdi  59
            M+  +L+V+D+ +I H+I VAL  + Y+ + A  G  + + L +   PDI++LDLGLPDI
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDI  59

Query  60   dgidviKKIREWSALDIIVVSARGHERQKVEALDAGADDYLTKPFSVPELLARIRVALRR  119
            DG+ +I+++R+     IIV+SAR +E+  VE LD GA+DY+TKPF++ EL ARIRVALR 
Sbjct  60   DGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR-  118

Query  120  ENALERHEEGLLQPVFELDDLKVDFDKQKVTICDKDIHLTPTEYKLLALLIKHRGKVLTH  179
               + R  E + Q+ F  + L +DFD + V + ++ +HLTP E++LL++L  H GKVLT 
Sbjct  119  ---MSRSTETI-QSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTY  174

Query  180  MSIIKEIWGPYSVDDTQSLRVCMANIRRKIE--RDP-AQPRYIITEVGVGYR  228
              ++K + G  +  +  +LRV MA++R+K++  +DP ++ + IIT+  +GY+
Sbjct  175  QVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

178) Rvan_3283 in NC_014664


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  112 bits (408),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 93/229 (41%), Positives = 149/229 (66%), Gaps = 8/229 (3%)

Query  6    RTLVLVVEDEPQIRRLLRTSLGANGFAVVEAINGK-AAFEAITRERPEVIlldlglpdmd  64
            +T +LVVED+  I +L+  +L  N + VV A  GK A F  +  E+P++ILLDLGLPD+D
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFR-LRTEQPDIILLDLGLPDID  60

Query  65   glAIIETLRSSGDKTPIVVLSSRGEEATKVEALDLGADDYVTKPFGVAELIARLRTSLRH  124
            GL++I+ +R   D TPI+V+S+R EE T VE LD GA+DY+TKPF + EL AR+R +LR 
Sbjct  61   GLSLIQQFRDFVD-TPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM  119

Query  125  RVQAEGGEPVFESGDLRIDLVHRRVTRSGSDVKLSPKEYDILRLLALHAGKVLTHKFIMA  184
               +E  ++ F +G L ID+  + V  +   V L+P+E+++L +L  H GKVLT + ++ 
Sbjct  120  SRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  185  ELWG--ANADVQYLRIYVRQLRAKIEAHSESPQH---IITETGVGYRLK  228
             L G   ++++  LR+ +  LR K++   ++  +   IIT+  +GY+++
Sbjct  180  SLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQ  228

179) Sros_0437 in NC_013595


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  112 bits (408),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 75/185 (41%), Positives = 123/185 (67%), Gaps = 10/185 (5%)

Query  45   RPDLVILDLGLPDIDGVDVIHGLRGWTSIPIVVLSGRAGGADKVDALDAGADDYVTKPFN  104
            +PD+++LDLGLPDIDG+ +I+ +R+    PI+V+S+R+     V+ LD GA+DY+TKPFN
Sbjct  46   QPDIILLDLGLPDIDGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFN  105

Query  105  IDELLARIRAVTRRTALHDSELARIRIGDHVVDLVGKTV---SGGVRLTPTEWHLLEILL  161
            IDEL ARIR   R +   ++  +R+  G   +D+ +K+V     +V+LTP E +LL IL 
Sbjct  106  IDELRARIRVALRMSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILC  165

Query  162  RNPGKLISQRRLLTEVWGAKYLKETHY--LRQYMTQMRKKLE--RDPAHPVHL-LTEPGM  216
            ++ GK+++ + LL  + G  Y+++T+   LR  M+ +RKKL+  +DP     L +T+P +
Sbjct  166  HHVGKVLTYQVLLKSLYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRI  223

Query  217  GYRFH  221
            GY+ +
Sbjct  224  GYQMQ  228

180) EHR_09260 in NC_018081


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 98/230 (43%), Positives = 154/230 (67%), Gaps = 6/230 (2%)

Query  1    MNKMILLIEDDPNITDFMEVVFEREQYRLTVAANGMEALTALQAETFdvilldlglpdid  60
            M+  +L++EDD  I ++++V +  + Y++  A  G EA   L++E  D+ILLDLGLPDID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   gmdllKILRKRMDLPIVVISARKDENEKVAALDLGADDYVTKPFGTNELLARIRTALRHK  120
            G+ L++ +R  +D PI+VISAR +E+  V  LD GA+DY+TKPF  +EL ARIR ALR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  KTKEEQTLIVVNNALKIDFDKQLVYKNDQEIHLTKNEYRLLKCLFEQIGKVVTYQTLMTQ  180
            ++ E       N +L IDFD + V  N+Q +HLT NE++LL  L +++GKV+TYQ L+  
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  VWGPYSEDSQI--LRVNMSNIRKKI---ETNTLKPEYIITEIGIGYRLRD  225
            + G Y +++++  LRV+M+++RKK+   +        IIT+  IGY++++
Sbjct  181  LYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

181) Closa_4230 in NC_014376


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  111 bits (405),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 96/237 (41%), Positives = 155/237 (66%), Gaps = 11/237 (4%)

Query  3    KFTIVMIEDEKNICNFIESALERHDYKVNTAHNGRDGLALINSLCpdvilldlglpdldg  62
            K T++++ED+  I ++I+ AL  + YKV TA  G+++   + +  PD+ILLDLGLPD+DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  63   idiiKSVRSWTSIPIIVISARTQEHEKVAALDYGADDYITKPFGTSELLARIRTALRHGR  122
            + +I+  R     PIIVISART+E+  V  LD GA+DY+TKPF   EL ARIR ALR +R
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  123  PTVSTVDGSVIPTPYKSDGLVIDFAKRLVTLEGHKIHLTQIEYKLVSLLAIHSGKVLTYD  182
            +T        I + + ++ L IDF  + V ++ + +HLT  E++L+++L  H GKVLTY+
Sbjct  122  ST------ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQ  175

Query  183  YIISHIWGPYADNNN-QILRVNMAHIRRKIEINP---AEPNYIFTEIGVGYRMKESE  235
             ++  + G Y ++ +   LRV+MA +R+K++      +E + I+T+  +GY+M++ E
Sbjct  176  VLLKSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

182) Clos_0861 in NC_009922


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  111 bits (403),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 93/227 (41%), Positives = 161/227 (71%), Gaps = 5/227 (2%)

Query  7    ILIIEDDKYILNFISLSLKTNGYVFDTAKTGIQGMSLFYSNNpdvilldlglpdidgidi  66
            +L++EDD  IL++I ++L  N Y   TAKTG ++   + +++PD+ILLDLGLPDIDG+ +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  67   iKSIRMISEVPILIVSARGEEKEKISALDAGADDYITKPFHMGELLARIRVVERKLKKAV  126
            I+ +R + + PI+++SAR EE+  +  LD GA+DY+TKPF+++EL ARIRV  R + ++ 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR-MSRST  123

Query  127  QGDNAEIFQLDYLTIDYERRMVLVDHKEIHLTPIEYKLLLLLVENKGKVLTHNYILKKIW  186
            +  ++  F  + LTID++ + VLV+++ +HLTP E++LL +L ++ GKVLT + +LK + 
Sbjct  124  ETIQSR-FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  187  GYGETGDSKSIRVFMANLRRKI---EKDKTSPRFIFTEVGVGYRFAN  230
            GY +  +  ++RV MA+LR+K+   +  +T  ++I+T+  +GY+  +
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

183) Ent638_1206 in NC_009436


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  109 bits (397),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 69/162 (43%), Positives = 108/162 (67%), Gaps = 3/162 (1%)

Query  64   IREVRQWSQMPIIVLSARAEEMDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I++ R+  + PIIV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  PAEPVFTFSDIQVDLAARRILRGAQEIHLTPIEFRLLAILLNNHGKVLTQRQLLNQVWGP  183
              ++ FT + + +D+ A+ +L   Q +HLTP EF+LL+IL ++ GKVLT + LL+ + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  184  NAVEHSHYLRIYMGHLRQKLE--VDPARPRHL-LTETGIGYR  222
                +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

184) kdpE in NC_015391


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 96/231 (42%), Positives = 157/231 (68%), Gaps = 8/231 (3%)

Query  1    MVKQLLLIEDDATIIDFMEVVLSKENYLLKVAKTGMEALTF-LQTESFdlllldlglpdi  59
            M   LL++EDD +I+++++V L+ + Y +  AKTG EA  F L+TE  D++LLDLGLPDI
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEA-DFRLRTEQPDIILLDLGLPDI  59

Query  60   dgidllKIVRKRMTIPIIILSARTNELEKVKALDHGADDYVTKPFGTHELLARIRTSLRH  119
            DG+ L++  R  +  PII++SART+E   V  LD+GA+DY+TKPF  +EL ARIR +LR 
Sbjct  60   DGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRM  119

Query  120  STNQVIESPTIKNKDLKIDFEKQLLYKLGKEVHLTKNEYRILKVLFENLGKVVTYNTLMT  179
            S +     + + N  L IDF+ + +    + VHLT NE+++L +L +++GKV+TY+ L+ 
Sbjct  120  SRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  180  AVWGPYAGDSQI--LRVNMSNIRKKMEYN---TLEPEYLTTEIGVGYRMKD  225
            ++ G Y  ++++  LRV+M+++RKK++Y      E   + T+  +GY+M++
Sbjct  180  SLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

185) kdpE in NC_010658


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 67/163 (42%), Positives = 110/163 (68%), Gaps = 3/163 (1%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKYSDVTVDLAARVIHRGEEEVHLTPIEFHLLAVLLNNAGKVLTQRQLLNQVWG  182
             + ++    + +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + G
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  183  PNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETSIGYR  222
                 +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  184  YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

186) Tter_2094 in NC_013526


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 93/225 (42%), Positives = 139/225 (62%), Gaps = 6/225 (2%)

Query  7    ARVLVVEDEPPILRMLASNLRSHGMQVLTAATLREAMEKHATFRPDVILLDLRLPDGRGE  66
            + +LVVED+ +IL+++   L  +  +V+TA T +EA  +  T +PD+ILLDL LPD  G 
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  67   ELIRQVRLTSTVPIIVLSAYGEEGQKVAALEMGADDYLTKPFGVKEllarirvalrraaG  126
             LI+Q R     PIIV+SA  EE   V  L+ GA+DY+TKPF + EL ARIRVALR + +
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRS  122

Query  127  KASGEPEVRVGELTLDLANRRVTVDGQQVQLTPTEYALLKVLAVHLNKVLTDSQLLNEVW  186
              + ++    G LT+D+  + V V+ Q V+LTP E+ LL +L  H+ KVLT   LL+ + 
Sbjct  123  TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  187  GQAYGSEPHYLHVYVSRLRRKL------GPAAKYLVTEPGVGYRL  225
            G    +E   L+V ++ LR+KL          K ++T+P +GY++
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

187) vicR in NC_017491


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  1    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVESESPDLILLDLMLPKID  60
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  120
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  SSANAAGSEEDEANRELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  180
             S+++  S        +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTETIQS-------RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  181  REHLLQTVWGY  191
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

188) LRHM_2706 in NC_017482


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  2    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVESESPDLILLDLMLPKID  61
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  62   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  121
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  SSANAAGSEEDEANRELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  181
             S+++  S        +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTETIQS-------RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  182  REHLLQTVWGY  192
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

189) phoP4 in NC_013198


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  1    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVESESPDLILLDLMLPKID  60
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  120
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  SSANAAGSEEDEANRELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  180
             S+++  S        +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTETIQS-------RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  181  REHLLQTVWGY  191
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

190) phoP4 in NC_013199


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  1    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVESESPDLILLDLMLPKID  60
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  120
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  SSANAAGSEEDEANRELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  180
             S+++  S        +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTETIQS-------RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  181  REHLLQTVWGY  191
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

191) LOCK900_2803 in NC_021723


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  2    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVESESPDLILLDLMLPKID  61
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  62   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  121
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  SSANAAGSEEDEANRELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  181
             S+++  S        +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTETIQS-------RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  182  REHLLQTVWGY  192
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

192) LOCK908_2894 in NC_021725


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  2    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVESESPDLILLDLMLPKID  61
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  62   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  121
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  SSANAAGSEEDEANRELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  181
             S+++  S        +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTETIQS-------RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  182  REHLLQTVWGY  192
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

193) kdpE in NC_016514


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 67/162 (42%), Positives = 107/162 (67%), Gaps = 3/162 (1%)

Query  64   IREVRQWSQMPILVLSARTEESDKIAALDAGADDYLIKPFGIGELQARLRVALRRHSATT  123
            I++ R+  + PI+V+SARTEE   +  LD GA+DY+ KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  PADPTYTFGDIRVDLAARRIVRGEEEIHLTPIEFRLLAVLLNNHGKVLTQRQLLSQVWGP  183
              ++ +T G + +D+ A+ ++  E+ +HLTP EF+LL++L ++ GKVLT + LL  + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  184  NAVEHSHYLRIYMGHLRQKLE--VDPARPRHL-LTETGIGYR  222
                +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

194) ECENHK_06520 in NC_018405


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 67/162 (42%), Positives = 107/162 (67%), Gaps = 3/162 (1%)

Query  64   IREVRQWSQMPILVLSARTEETDKIAALDAGADDYLIKPFGIGELQARLRVALRRHSATT  123
            I++ R+  + PI+V+SARTEE   +  LD GA+DY+ KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  PADPTYTFGDIRVDLAARRIVRGEEEIHLTPIEFRLLAVLLNNHGKVLTQRQLLSQVWGP  183
              ++ +T G + +D+ A+ ++  E+ +HLTP EF+LL++L ++ GKVLT + LL  + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  184  NAVEHSHYLRIYMGHLRQKLE--VDPARPRHL-LTETGIGYR  222
                +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

195) kdpE in NC_007613


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFHLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

196) yycF_2 in NC_018641


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  9    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVEAESPDLILLDLMLPKID  68
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  69   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  128
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  129  ASSNAASNEEDEANKELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  188
             S+++        +  +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTET-------IQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  189  REHLLQTVWGY  199
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

197) RPB_4649 in NC_007778


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 147/227 (65%), Gaps = 3/227 (1%)

Query  3    VKSRVLVVDDEPAILRFLKPALEANGYDVSHAATVTEAIKRVAADAPDIVlldlgladgd  62
            +K+ +LVV+D+ AIL+++  AL  N Y V  A T  EA  R+ ++ PDI+LLDLGL+D D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  63   gkdVIRQVRAWSDLPILVLSAREREAEKIESLDLGADDYVNKPFNSGELmarmraalrhr  122
            G  +I+Q R   D PI+V+SAR  E   +E LD GA+DY+ KPFN +EL AR+R ALR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  123  mqrNAEPAALSVGGIEIDAVRHRVTRDGDEIKLTPKEFELLAFLVRHAGRVVTHRQILAA  182
               ++  + ++ G + ID     V  + + + LTP+EF+LL++L +H G+V+T + +L +
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  183  VWGPAHTSDTQYLRVYIGQLRQKI---EAHADEPRIILTEPGIGYRI  226
            + G  + ++   LRV ++ LR+K+   +    E ++I+T+P IGY++
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

198) ECP_0712 in NC_008253


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

199) kdpE in NC_017631


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

200) kdpE in NC_008563


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

201) kdpE in NC_004431


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

202) kdpE in NC_017652


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

203) kdpE in NC_017651


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

204) kdpE in NC_011745


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

205) kdpE in NC_011993


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

206) kdpE in NC_017644


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

207) NRG857_03125 in NC_017634


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

208) kdpE in NC_011742


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

209) ECSF_0629 in NC_013654


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

210) LSEI_2808 in NC_008526


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  1    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVEAESPDLILLDLMLPKID  60
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  120
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  ASSNAASNEEDEANKELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  180
             S+++        +  +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTET-------IQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  181  REHLLQTVWGY  191
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

211) phoP in NC_017474


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  2    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVEAESPDLILLDLMLPKID  61
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  62   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  121
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  ASSNAASNEEDEANKELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  181
             S+++        +  +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTET-------IQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  182  REHLLQTVWGY  192
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

212) rrp3 in NC_010999


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  1    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVEAESPDLILLDLMLPKID  60
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  120
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  ASSNAASNEEDEANKELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  180
             S+++        +  +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTET-------IQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  181  REHLLQTVWGY  191
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

213) phoP in NC_017473


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  2    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVEAESPDLILLDLMLPKID  61
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  62   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  121
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  ASSNAASNEEDEANKELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  181
             S+++        +  +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTET-------IQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  182  REHLLQTVWGY  192
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

214) LOCK919_3070 in NC_021721


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  2    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVEAESPDLILLDLMLPKID  61
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  62   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  121
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  ASSNAASNEEDEANKELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  181
             S+++        +  +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTET-------IQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  182  REHLLQTVWGY  192
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

215) LCAZH_2820 in NC_014334


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  1    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVEAESPDLILLDLMLPKID  60
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  120
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  ASSNAASNEEDEANKELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  180
             S+++        +  +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTET-------IQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  181  REHLLQTVWGY  191
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

216) LBPG_01414 in NC_022112


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 123/191 (65%), Gaps = 7/191 (3%)

Query  2    MAKKILVVDDEKPISDIVKFNLDKEGYDVVTAYDGEEALKKVEAESPDLILLDLMLPKID  61
            M   +LVV+D+ +I +++   L  + Y VVTA  G EA  ++ +E PD+ILLDL LP ID
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  62   GLEVARQIRKEHDTPIIMLTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRT  121
            GL + +Q+R   DTPII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR +
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  122  ASSNAASNEEDEANKELEVGDLTIHPDAYTVSKRGENIELTHREFELLHYLARHLGQVMT  181
             S+++        +  +  G LTI+ DA +V    ++++LT  EF+LL  L +H+G+V+T
Sbjct  121  RSTET-------IQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  182  REHLLQTVWGY  192
             + LL+++ GY
Sbjct  174  YQVLLKSLYGY  184

217) vicR in NC_016605


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 75/185 (41%), Positives = 120/185 (65%), Gaps = 3/185 (1%)

Query  2    PKILVVDDEKPISDIVKFNLTKEGYDVVTAYDGEEALALVESEKPDLILLDLMLPKIDGL  61
              +LVV+D+ +I +++   LT + Y VVTA  G EA   + +E+PD+ILLDL LP IDGL
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  62   EVARQVRAKHNIPIIMVTAKDSELDKVVGLELGADDYVTKPFSNRELVARVKANLRRQDQ  121
             + +Q R   + PII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR    
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS--  120

Query  122  LQTEQTENNNLKIGPLLINADSYSVTRDGNQLDLTHREFELLHYLAKHIGQVMTREHLLQ  181
             ++ +T ++ +  GPL I+ D+ SV  + + ++LT  EF+LL  L  H+G+V+T + LL+
Sbjct  121  -RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  182  TVWGY  186
            ++ GY
Sbjct  180  SLYGY  184

218) kdpE in NC_017628


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPTRPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

219) kdpE in NC_022370


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPTRPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

220) UM146_14100 in NC_017632


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPTRPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

221) kdpE in NC_007946


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TTPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             T ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPTRPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

222) kdpE in NC_011740


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 114/165 (70%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TAPEPLVKFSD--VTVDLAARVIHRSEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +  +E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

223) kdpE in NC_011751


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 70/164 (43%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  TPDPLVKFSN--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            T ++  +F+N  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

224) APECO78_07000 in NC_020163


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

225) kdpE in NC_009801


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

226) kdpE in NC_011741


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

227) kdpE in NC_017660


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

228) EKO11_3185 in NC_016902


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

229) LY180_03685 in NC_022364


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

230) kdpE in NC_013353


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

231) O3M_18160 in NC_018650


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

232) O3O_07115 in NC_018661


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

233) O3K_18180 in NC_018658


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

234) kdpE in NC_013364


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

235) kdpE in NC_011601


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

236) kdpE in NC_013361


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

237) kdpE in NC_017646


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRPLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

238) ECSE_0754 in NC_011415


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

239) kdpE in NC_017635


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

240) kdpE in NC_017664


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

241) XNR_1367 in NC_020990


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 148/232 (64%), Gaps = 11/232 (4%)

Query  2    ARVLVVEDDAQLARALRINLEVRSYEVAAARDG-DGALRLFATGEPDAVLLDLGLPDTDG  60
            + +LVVEDD  + + + + L +  Y V +A+ G ++ +RL  T +PD +LLDLGLPD DG
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRL-RTEQPDIILLDLGLPDIDG  61

Query  61   VELIKAIRSRSRAPILVLSARHLSGEKVRALDAGADDYVTKPFSMDellarlraatrrrr  120
            + LI+ +R    +PI+V+SAR      V  LD GA+DY+TKPF++DEL AR+R A R  R
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  121  ataeaealtVVTTDHFTIDLPAKKLLREGHPVRLTPTEWHLLEILAASPGRRVSQRALLL  180
            +T   ++    T + +TID+ AK +L + ++V+LTP E +LL IL    G+ ++ + LL 
Sbjct  122  STETIQSR--FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  181  EVWGPAYAENTNY--LRVYMAQLRRKLE--ADPSRP-RYLITEPGLGYRFEP  227
             + G  Y ++T+   LRV MA LR+KL+   DP+   + +IT+P +GY+ + 
Sbjct  180  SLYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

242) A3UG_06425 in NC_018079


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 67/162 (42%), Positives = 107/162 (67%), Gaps = 3/162 (1%)

Query  64   IREVRQWSQMPILVLSARTEETDKIAALDAGADDYLIKPFGIGELQARLRVALRRHSATV  123
            I++ R+  + PI+V+SARTEE   +  LD GA+DY+ KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  PADPTYTFGDVQVDLAARRIVRGEEEIHLTPIEFRLLAVLLNNHGKVLTQRQLLSQVWGP  183
              ++ +T G + +D+ A+ ++  E+ +HLTP EF+LL++L ++ GKVLT + LL  + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  184  NAVEHSHYLRIYMGHLRQKLE--VDPARPRHL-LTETGIGYR  222
                +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

243) kdpE in NC_017626


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (388),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

244) kdpE in NC_012759


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

245) EcDH1_2942 in NC_017625


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

246) kdpE in NC_017638


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

247) ETEC_0710 in NC_017633


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

248) kdpE in NC_009800


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (388),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

249) kdpE in NC_011750


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

250) kdpE in NC_010473


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

251) kdpE in NC_020518


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

252) kdpE in NC_000913


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

253) kdpE in NC_007779


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

254) kdpE in NC_010498


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

255) CNE_2c08490 in NC_015723


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 131/207 (64%), Gaps = 5/207 (2%)

Query  6    SPTVLLVEDEPHIRRFVRSTLESEGCMVHEAESLKRGLIEAGTRQPDLVILDLGLPDGDG  65
              T+L+VED+  I +++  +L  +   V  A + K + +   T QPD+++LDLGLPD DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  66   VQLISEIRTWTDVPVLVLSARSGEADKIGALDAGADDYLTKPFGVGElvarlrvllrrha  125
            + LI ++R   D P++V+SAR+ E   +  LD GA+DY+TKPF ++EL AR+RV LR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  126  ranaQGSHQILF--GDVQIDLASRVVTRSGQAVHLTPIEYRLLAVLIAHRGKVMTHRELL  183
             +++  S+   F  G + ID+ ++ V  + Q+VHLTP E++LL++L  H GKV+T + LL
Sbjct  122  STETIQSR---FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REVWGPSQAESSQYLRVYMGHLRHKLE  210
            + + G  +      LRV M+ LR KL+
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLN  205

256) kdpE in NC_017663


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (388),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  38   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  97
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  98   TAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  155
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  156  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  197
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

257) SSON53_03450 in NC_016822


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (388),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSPVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

258) kdpE in NC_007384


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (388),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSPVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

259) kdpE in NC_013656


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  107 bits (388),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 94/233 (41%), Positives = 161/233 (70%), Gaps = 10/233 (4%)

Query  8    ILICEDDLSINKLLSLTMEVEDYNYVAVQNGKEALREIISQRpdllildlglpdmdgKEI  67
            +L+ EDD +I  L+ +++ ++ Y+ V+ + GKEA   + +++PD+++LDLGLPD+DG  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  68   ISKVRGFSQLPIIVVSARGEDADKIAALDAGADDYLTKPFSTDEllarlrvslrraKFSG  127
            I + R+F + PIIV+SAR E+   +  LD GA+DY+TKPF+ DEL AR+RV+LR ++ + 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  NNQNLLTEVTTFTNGWLKINYLSKCAFVNEKEIHLTPIEYKLLCLLAENLDRVMTYNYLV  187
              Q      + FTNG L I++ +K  +VNE+ +HLTP E++LL +L +++++V+TY+ L+
Sbjct  125  TIQ------SRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  188  KEIWGYYEE-DFSALRVFANTLRKKIELDSNYP---KMIQTHIGVGYRMIKID  236
            K + GY ++ + +ALRV   +LRKK++   +     K+I TH  +GY+M  ++
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

260) EGYY_06080 in NC_015738


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 97/233 (42%), Positives = 156/233 (67%), Gaps = 10/233 (4%)

Query  7    ILVVEDDTAVRRLVVTTLDVHGYAVREAKTVAQALLELSSQppdlaildlglpdgdgVDV  66
            +LVVEDD A+ +L+  +L ++ Y V  AKT  +A + L ++ PD+ +LDLGLPD DG+ +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  67   IRTLREWSSLPVIVLSARLEDADKVAALDAGADDYLVKPFSveellarlrvalrrlerer  126
            I+ +R+    P+IV+SAR E+   V  LD GA+DY+ KPF+++EL AR+RVALR      
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  127  alQGGPEEVVYENGALRIDYASACVTRDDEEVHLTPSEYKLLCLLARNTGKVLTHNYLLK  186
            ++Q+      + NG+L ID+ +  V  +++ VHLTP+E++LL +L ++ GKVLT + LLK
Sbjct  125  TIQSR-----FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  187  EVWGSALASDRSSLRVFMATLRKKI----EPDPSNPVYIQTHVGVGYRMLRVE  235
             + G    ++ ++LRV MA+LRKK+    +P+  + + I TH  +GY+M ++E
Sbjct  180  SLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLII-THPRIGYQMQHLE  231

261) kdpE in NC_011353


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 111/164 (68%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPSHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP     + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

262) kdpE in NC_002655


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 111/164 (68%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPSHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP     + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

263) ECs0722 in NC_002695


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 111/164 (68%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPSHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP     + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

264) kdpE in NC_013008


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 111/164 (68%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPSHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP     + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

265) kdpE in NC_013941


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 111/164 (68%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPSHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP     + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

266) ECO55CA74_04140 in NC_017656


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 111/164 (68%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPSHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP     + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

267) CDCO157_0702 in NC_017906


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 68/164 (42%), Positives = 111/164 (68%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPSHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP     + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

268) NH44784_008011 in NC_021285


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 130/206 (64%), Gaps = 3/206 (1%)

Query  5    QPTVLIIEDDANIRRFVRQALESEGCAVYEADTVKRGLIEAGTRQPDAVVLDLGLPDEDG  64
            + T+L++EDD  I +++  AL  +   V  A T K + +   T QPD ++LDLGLPD DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  65   MTLIRELRGWTEVPVLVLSARTAEADKVAALDAGADDYLTKPFGVSEllarlrvllrrha  124
            ++LI+++R+  + P++V+SART E   V  LD GA+DY+TKPF + EL AR+RV LR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  125  rggagsaaEISFGDVRVDFARRVVERGGQHVHLTAMEYRLLAALLAHRGKVMTHRELLRE  184
               +  +  ++ G + +DF  + V    Q VHLT+ E++LL+ L  H GKV+T + LL+ 
Sbjct  122  STETIQSR-FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  185  VWG-PSHVESNHYLRIYMGHLRQKLE  209
            + G  +H E    LR+ M+ LR+KL+
Sbjct  181  LYGYVNHTEMAA-LRVHMASLRKKLN  205

269) kdpE in NC_012971


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 67/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEMHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ +HLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

270) kdpE in NC_012892


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 67/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEMHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ +HLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

271) ECBD_2966 in NC_012947


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 67/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEMHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ +HLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

272) kdpE in NC_012967


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 67/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEMHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ +HLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

273) A79E_3525 in NC_018522


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQ  123
            I+++R+  + PIIV+SAR+EE+  +  LD GA+DY++KPF I+EL+AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  ADEPVVRFAD--LEVNIPARRILRGSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQVW  181
            + ++  RF++  L +++ A+ +L   + +HLTP EF+LL+ L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--ADPARPQHL-LTETGIGYR  222
            G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

274) kdpE in NC_011283


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 67/164 (41%), Positives = 111/164 (68%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQ  123
            I+++R+  + PIIV+SAR+EE+  +  LD GA+DY++KPF I+EL+AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  DDEPVVRFAD--LEVNIPARRILRGSEEIHLTPIEFRLLTALLNNPGKVLTQRQLLNQVW  181
              ++  RF++  L +++ A+ +L   + +HLTP EF+LLT L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--ADPARPQHL-LTETGIGYR  222
            G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

275) KPHS_15460 in NC_016845


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQ  123
            I+++R+  + PIIV+SAR+EE+  +  LD GA+DY++KPF I+EL+AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  ADEPVVRFAD--LEVNIPARRILRGSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQVW  181
            + ++  RF++  L +++ A+ +L   + +HLTP EF+LL+ L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--ADPARPQHL-LTETGIGYR  222
            G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

276) N559_3616 in NC_022082


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQ  123
            I+++R+  + PIIV+SAR+EE+  +  LD GA+DY++KPF I+EL+AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  ADEPVVRFAD--LEVNIPARRILRGSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQVW  181
            + ++  RF++  L +++ A+ +L   + +HLTP EF+LL+ L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--ADPARPQHL-LTETGIGYR  222
            G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

277) KPN2242_06400 in NC_017540


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQ  123
            I+++R+  + PIIV+SAR+EE+  +  LD GA+DY++KPF I+EL+AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  ADEPVVRFAD--LEVNIPARRILRGSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQVW  181
            + ++  RF++  L +++ A+ +L   + +HLTP EF+LL+ L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--TDPARPQHL-LTETGIGYR  222
            G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

278) kdpE in NC_009648


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQ  123
            I+++R+  + PIIV+SAR+EE+  +  LD GA+DY++KPF I+EL+AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  ADEPVVRFAD--LEVNIPARRILRGSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQVW  181
            + ++  RF++  L +++ A+ +L   + +HLTP EF+LL+ L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--ADPARPQHL-LTETGIGYR  222
            G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

279) kdpE in NC_012731


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQ  123
            I+++R+  + PIIV+SAR+EE+  +  LD GA+DY++KPF I+EL+AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  ADEPVVRFAD--LEVNIPARRILRGSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQVW  181
            + ++  RF++  L +++ A+ +L   + +HLTP EF+LL+ L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNTVEHSHYLRIYMGHLRQKLE--ADPARPQHL-LTETGIGYR  222
            G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

280) kdpE in NC_021232


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQ  123
            I+++R+  + PIIV+SAR+EE+  +  LD GA+DY++KPF I+EL+AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  ADEPVVRFAD--LEVNIPARRILRGSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQVW  181
            + ++  RF++  L +++ A+ +L   + +HLTP EF+LL+ L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--ADPARPQHL-LTETGIGYR  222
            G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

281) Kvar_3658 in NC_013850


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQ  123
            I+++R+  + PIIV+SAR+EE+  +  LD GA+DY++KPF I+EL+AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  ADEPVVRFAD--LEVNIPARRILRGSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQVW  181
            + ++  RF++  L +++ A+ +L   + +HLTP EF+LL+ L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--ADPARPQHL-LTETGIGYR  222
            G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

282) kdpE in NC_008258


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (387),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  38   FIRDLRQWSPVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  97
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  98   AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  155
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  156  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  197
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

283) Entcl_3123 in NC_014618


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (387),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 66/162 (41%), Positives = 108/162 (67%), Gaps = 3/162 (1%)

Query  64   IRDFRQWSQVPIIVLSARAEETDKITALDAGADDYLSKPFGIGELQARLRVALRRYGGSE  123
            I++FR+  + PIIV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   ++E
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  QNQPLYTFSNTQVDLANRRIVRGDEEIHLTPIEFRLLAVLLNNHGKVLTQRQLLSQVWGP  183
              Q+ +T +   +D+  + ++  ++ +HLTP EF+LL++L ++ GKVLT + LL  + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  184  NAVEHSHYLRIYMGHLRQKLE--MDPARPQHL-LTETGIGYR  222
                +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

284) ECL_03024 in NC_014121


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (387),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 65/162 (41%), Positives = 107/162 (67%), Gaps = 3/162 (1%)

Query  64   IREVRQWSQMPILVLSARTEESDKIAALDAGADDYLIKPFGIGELQARLRVALRRHGAAT  123
            I++ R+  + PI+V+SARTEE   +  LD GA+DY+ KPF I+EL+AR+RVALR   ++ 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  PADPTYTFGDVHVDLASRRIVRGEEEIHLTPIEFRLLAVLLNNHGKVLTQRQLLAQVWGP  183
              ++ +T G + +D+ ++ ++  E+ +HLTP EF+LL++L ++ GKVLT + LL  + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  184  NAVEHSHYLRIYMGHLRQKLE--TDPARPRHL-LTETGIGYR  222
                +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

285) EcolC_2962 in NC_010468


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  106 bits (386),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 67/164 (41%), Positives = 112/164 (69%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATT  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVNLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            + ++  +F++  +T+++ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

286) kdpE in NC_013716


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 69/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHASA  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   S+
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  PAPEPVVRFSD--VTIDLAARLIHRGEKEIHLTPIEFRLLAVMLNNAGKVLTQRQLLNQV  180
             + ++  RF++  +TID+ A+ +   E+ +HLTP EF+LL+++ ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMAHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ MA LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

287) kdpE in NC_015761


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  105 bits (383),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 112/165 (68%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAIPIIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHTAS  122
            +I+++R+    PIIV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   ++
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  PCADPVVRFSN--VTVDLAARVIHRGDEEIHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
               ++  RF+N  +T+D+ A+ +   ++ +HLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPTRPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

288) A464_664 in NC_021870


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  105 bits (383),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 112/165 (68%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAIPIIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHTAS  122
            +I+++R+    PIIV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   ++
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  PCADPVVRFSN--VTVDLAARVIHRGDEEIHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
               ++  RF+N  +T+D+ A+ +   ++ +HLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPTRPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

289) kdpE in NC_011748


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 67/165 (41%), Positives = 112/165 (68%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  AAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIEYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  I Y+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

290) kdpE in NC_017486


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 95/233 (41%), Positives = 161/233 (70%), Gaps = 10/233 (4%)

Query  8    ILICEDDLSINKLLSLTMEVEDYNYVAVQNGKEALREIISQRpdllildlglpdmdgKEI  67
            +L+ EDD +I  L+ +++ ++ Y+ V+ + GKEA   + +++PD+++LDLGLPD+DG  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  68   ISKVRGFSQLPIIVVSARGEDADKIAALDAGADDYLTKLFSTDEllarlrvslrraKFSG  127
            I + R+F + PIIV+SAR E+   +  LD GA+DY+TK F+ DEL AR+RV+LR ++ + 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  NNQNLLTEVTTFTNGWLKINYLSKCVFVNEKEIHLTPIEYKLLCLLAENLDRVMTYNYLV  187
              Q      + FTNG L I++ +K V+VNE+ +HLTP E++LL +L +++++V+TY+ L+
Sbjct  125  TIQ------SRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  188  KEIWGYYEE-DFSALRVFANTLRKKIELDSNYP---KLIQTHIGVGYRMIKID  236
            K + GY ++ + +ALRV   +LRKK++   +     KLI TH  +GY+M  ++
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE  231

291) Entas_1186 in NC_015968


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 65/162 (41%), Positives = 107/162 (67%), Gaps = 3/162 (1%)

Query  64   IREVRQWSQMPILVLSARTEETDKIAALDAGADDYLIKPFGIGELQARLRVALRRHSATT  123
            I++ R+  + PI+V+SARTEE   +  LD GA+DY+ KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  PSEPVYTFSDIQVDLASRRIQRGEEEIHLTPIEFRLLAVLLNNHGKVLTQRQLLNQVWGP  183
              ++ +T + + +D+ ++ +   E+ +HLTP EF+LL++L ++ GKVLT + LL+ + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  184  NAVEHSHYLRIYMGHLRQKLE--VDPARPRHL-LTETGIGYR  222
                +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

292) HN6_00029 in NC_017481


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 120/189 (64%), Gaps = 7/189 (3%)

Query  2    KKILVVDDEKPISDIVKFNLTKEGYDVYTAYDGEEALQQVKEVEPDLILLDLMLPKIDGL  61
              +LVV+D+ +I +++   LT + Y V TA  G EA  +++  +PD+ILLDL LP IDGL
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  62   EVAREVRKTHDMPIIMVTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRQSA  121
             + ++ R   D PII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR    
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR----  118

Query  122  VAAKSSAEDDKNSEITVGDLTIHPEAYTVSKNGQRIELTHREFELLHYLAQHLGQVMTRE  181
                S + +  +S +T G LTI+ +A +V  N Q ++LT  EF+LL  L +H+G+V+T +
Sbjct  119  ---MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQ  175

Query  182  HLLQTVWGY  190
             LL+++ GY
Sbjct  176  VLLKSLYGY  184

293) LSL_0035 in NC_007929


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 120/189 (64%), Gaps = 7/189 (3%)

Query  2    KKILVVDDEKPISDIVKFNLTKEGYDVYTAYDGEEALQQVKEVEPDLILLDLMLPKIDGL  61
              +LVV+D+ +I +++   LT + Y V TA  G EA  +++  +PD+ILLDL LP IDGL
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  62   EVAREVRKTHDMPIIMVTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRQSA  121
             + ++ R   D PII+++A+  E   V  L+ GA+DY+TKPF+  EL AR++  LR    
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR----  118

Query  122  VAAKSSAEDDKNSEITVGDLTIHPEAYTVSKNGQRIELTHREFELLHYLAQHLGQVMTRE  181
                S + +  +S +T G LTI+ +A +V  N Q ++LT  EF+LL  L +H+G+V+T +
Sbjct  119  ---MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQ  175

Query  182  HLLQTVWGY  190
             LL+++ GY
Sbjct  176  VLLKSLYGY  184

294) kdpE in NC_007606


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 67/164 (41%), Positives = 110/164 (68%), Gaps = 7/164 (4%)

Query  64   IRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARMRVALRRHSATA  123
            I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  124  APDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAEKVLTQRQLLNQVW  181
            + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++  KVLT + LL+ + 
Sbjct  125  TIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPARPSHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP     + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

295) L083_3150 in NC_021191


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  103 bits (372),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 144/227 (64%), Gaps = 9/227 (3%)

Query  2    TRILVVDDEPQIVRALSINLKARRYEVDAAPDG-ASALRLAGDRHpdlvvldlglpdMEG  60
            T +LVV+D+  I++ + + L    Y V +A  G  + +RL  + +PD+++LDLGLPD++G
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDG  61

Query  61   TEVIRGLRGWTTVPIIVLSGRVESNDKVDALDAGADDYITKPFGIDELLariravtrrtr  120
              +I+ +R+    PIIV+S+R E +  V+ LD GA+DY+TKPF IDEL ARIR   R +R
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSR  121

Query  121  aPGEAAPTVTIGANTVELDTRRVRNGDREIRLTPTEWQLLEHLVRHPGKLHSQRALLHDV  180
            +     +  T G+ T+++D++ V   ++ ++LTP E QLL  L +H GK+ + + LL  +
Sbjct  122  STETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPQYL--TESNYLRQYMARLRRKLE--EDPARPRHL-ITEPGMGYR  222
             G  Y+  TE   LR  MA LR+KL+  +DP   + L IT+P +GY+
Sbjct  182  YG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

296) LMHCC_2858 in NC_011660


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  102 bits (368),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 94/230 (41%), Positives = 152/230 (67%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDHGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD+GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKETPNDHIIRIQDLFIDDDRRLVKMGDTEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S ET + ++     L ID D + V + +  +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKI---EKNPAEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K+   +   +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

297) kdpE in NC_017537


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  102 bits (368),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 94/230 (41%), Positives = 152/230 (67%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDHGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD+GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKETPNDHIIRIQDLFIDDDRRLVKMGDTEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S ET + ++     L ID D + V + +  +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKI---EKNPAEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K+   +   +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

298) kdpE in NC_017529


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  102 bits (368),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 94/230 (41%), Positives = 152/230 (67%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDHGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD+GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKETPNDHIIRIQDLFIDDDRRLVKMGDTEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S ET + ++     L ID D + V + +  +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKI---EKNPAEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K+   +   +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

299) Sdel_1461 in NC_013512


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (364),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 96/228 (43%), Positives = 142/228 (63%), Gaps = 16/228 (7%)

Query  4    ILIVEDDDAIAKLLTISLHEYGFKTKHAYDLATAKRD------ILSHNplliildlglpd  57
            +L+VEDD+AI  L+ ++L      T + Y + TAK +      + +++P +I+LDLGLPD
Sbjct  5    LLVVEDDEAILHLIDVAL------TMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPD  58

Query  58   gdgKSLITKVRKQSKTPIIVLSARNDEKEIIAALDLGADDYVTKPFSTSELLARVRSTLR  117
             DG SLI + R    TPIIV+SAR +E+ I+  LD GA+DY+TKPF+  EL AR+R +LR
Sbjct  59   IDGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR  118

Query  118  RVQAT-TARDMLTCKDLTIDFTKKEVQLKGALLKLTPTEYTLLRYLMQNANKVLPHQQIL  176
              ++T T +  +T   LTIDF  K V ++   + LTP E+ LL  L ++  KVL  Q +L
Sbjct  119  MSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  177  KEVWGVGYQNEMQYLRTYINSLRKKI---EDSSTRPEYITTESSIGYR  221
            K + G   + EM  LR  + SLRKK+   +D++T    I T++ IGY+
Sbjct  179  KSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

300) MUO_13405 in NC_017728


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

301) kdpE in NC_018584


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

302) Lm4b_02651 in NC_012488


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

303) LM220_02902 in NC_021830


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

304) LM1816_02417 in NC_021829


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

305) kdpE in NC_018642


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

306) kdpE in NC_018587


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

307) kdpE in NC_002973


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

308) kdpE in NC_018591


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

309) kdpE in NC_018585


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

310) kdpE in NC_018586


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

311) M640_12785 in NC_021839


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

312) M644_02135 in NC_021827


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

313) M645_10175 in NC_021840


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

314) M637_01630 in NC_021824


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

315) M638_01770 in NC_021825


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

316) M643_08970 in NC_021826


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

317) M641_02380 in NC_021838


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

318) kdpE in NC_019556


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score =  100 bits (362),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 94/230 (41%), Positives = 156/230 (68%), Gaps = 9/230 (3%)

Query  17   KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  76
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  77   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  136
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  137  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTPIEYKILLLLARHAGKVLTHDFII  196
            + S E+ + ++     L ID D + V + ++ +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  197  REIWGPYPSENQ--ALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  241
            + + G Y ++ +  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

319) lin2826 in NC_003212


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 94/230 (41%), Positives = 155/230 (68%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYAVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKEAPNDHIIRIQDLYIDDDRRLVKMGDMEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S E+ + ++     L ID D + V + +  +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPYSSENQ--ALRVNMSNIRRKIE--QNP-AEPAYILTEVGVGYRM  228
            + + G Y ++ +  ALRV+M+++R+K++  Q+P +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

320) FBFL15_2462 in NC_016001


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 98.6 bits (355),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 97/231 (42%), Positives = 155/231 (68%), Gaps = 12/231 (5%)

Query  4    KFSILVIDDEIQIRKLLEISLEANDYKVEFASNGTEGLTLVAKIQpdlvlldlglpdedg  63
            K ++LV++D+  I  L++++L  N YKV  A  G E+   +   QPD++LLDLGLPD DG
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   QNILIKLREWYFNPIIILSVKSSEVEIVKALDNGANDYLTKPFRTQELLARMRTALRVNA  123
             +++ ++R+    PII++S ++ E  IV  LD GANDY+TKPF  +EL AR+R ALR++ 
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS-  120

Query  124  VQNTEPIAS-F--GNVSIDLVSRVVKVNNEILKLTATEYTLLILLFKNDGRVLTHQYILK  180
             ++TE I S F  G ++ID+ ++ V VN++ + LT+ E+ LL +L  + G+VLT Q +LK
Sbjct  121  -RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  181  EIWGNSYSDQTQY--LRVFVAQLRKKIE--KDPNRP-KYIVTESGVGYRFN  226
             + G  Y ++T+   LRV +A LRKK++  +DPN   K I+T++ +GY+ +
Sbjct  180  SLYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQ  228

321) kdpE in NC_018590


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 98.1 bits (353),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 94/230 (41%), Positives = 151/230 (66%), Gaps = 9/230 (3%)

Query  4    KRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSpdvvlldlglpdveg  63
            K  +L+VED+E+I ++I   LT + Y V+ A  GKEA  +  ++ PD++LLDLGLPD++G
Sbjct  2    KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG  61

Query  64   ldvlRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQ  123
            L +++++R     PIIV+SAR +E+  V  LD GA+DY+TKPF   EL ARIR ALR   
Sbjct  62   LSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR--M  119

Query  124  PSSKETPNDHIIRIQDLFIDDDRRLVKMVDTEIHFTPIEYKILLLLARHAGKVLTHDFII  183
            + S ET + ++     L ID D + V + +  +H+TP E+++L +L +H GKVLT + ++
Sbjct  120  SRSTETIQSRFTN-GPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLL  178

Query  184  REIWGPY--PSENQALRVNMSNIRRKI---EKNPAEPAYILTEVGVGYRM  228
            + + G Y   +E  ALRV+M+++R+K+   +   +E   I+T+  +GY+M
Sbjct  179  KSLYG-YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQM  227

322) Dd586_1170 in NC_013592


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 97.0 bits (349),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 67/162 (42%), Positives = 106/162 (66%), Gaps = 3/162 (1%)

Query  68   IRDLRQWSAIPVIVLSARTDEQDKIAALDAGAEDYLTKPFGIGELLARSRVALRRFSTPQ  127
            I+++R+    P+IV+SART+EQ  +  LD GA+DY+TKPF I+EL AR RVALR   + +
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  QETPLITFSNVTVDLLNRQVIRNQQELHLTPIEFRLLSTLLASPGKVLTQRQLLNQVWGP  187
               + +T + +T+D+  + V+ N+Q +HLTP EF+LL+ L    GKVLT + LL+ + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  188  NAVEHSHYLRIYMGHLRQKLE--DDPARPRHF-LTETAIGYR  226
                +   LR+ M+ LR+KL+  +DP   + + +T+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

323) Ser39006_1854 in NC_022268


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 96.5 bits (347),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 66/162 (41%), Positives = 105/162 (65%), Gaps = 3/162 (1%)

Query  68   IRDLRQWSTIPVIVLSARTDEQDKIAALDEGANDYLTKPFGIGELMARVRVALRRFNAPL  127
            I+++R+    P+IV+SART+EQ  +  LD GANDY+TKPF I+EL AR+RVALR   +  
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  QETPLINFDAVTVDLVNRQVLRDGLELHLTPLEFRLLSTLIANPGKVLTQRYLLNQVWGP  187
               + +  +++T+D+  + VL +   +HLTP EF+LL+ L  + GKVLT + LL+ + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  188  NAIEHSHYLRIYMGHLRQKLE--NDPARPRHF-LTETAIGYR  226
                +   LR+ M+ LR+KL+  +DP   + + +T+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

324) kdpE in NC_014500


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 95.7 bits (344),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 73/173 (43%), Positives = 118/173 (69%), Gaps = 3/173 (1%)

Query  1    MGLPDGDGIDYIRDLRQWSAIPVIVLSARTDEQDKINALDAGADDYLTKPFGIGEllarv  60
            +GLPD DG+  I+++R+    P+IV+SART+EQ  ++ LD GA+DY+TKPF I+EL AR+
Sbjct  54   LGLPDIDGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARI  113

Query  61   rvalrrFSTTQQETPLITFSNVTVDLVNRQVIRDQQELHLTPIEFRLLSTLLANPGKVLT  120
            RVALR   +T+   + +T + +T+D+  + V+ ++Q +HLTP EF+LL+ L  + GKVLT
Sbjct  114  RVALRMSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLT  173

Query  121  QRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLE--DDPARPRHF-LTETAIGYR  170
             + LL+ + G     +   LR+ M+ LR+KL+  +DP   + + +T+  IGY+
Sbjct  174  YQVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

325) Pat9b_1098 in NC_014837


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.9 bits (341),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 91/224 (41%), Positives = 152/224 (68%), Gaps = 4/224 (1%)

Query  2    TTILIVEDEKEIRRFVRLALEGEGLKIVEAEQLQRGLIEAATRKPdlvildlglpdgdgn  61
            TT+L+VED+  I +++ +AL  +  K+V A   + + +   T +PD+++LDLGLPD DG 
Sbjct  3    TTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGL  62

Query  62   dFIREVRQWSSMPVIVLSARTDEQDKIAALDAGADDYLTKPFGIGEllarvrvalrrHQG  121
             +I++ R+    P+IV+SART+EQ  +  LD GA+DY+TKPF I+EL AR+RVALR  ++
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRS  122

Query  122  SQP-DPVLSFGEVTVDLAARRVLRSGEEVHLTPTEFRLLSLLLNNAGKVLTQRQLLNQVW  180
            ++  ++ ++ G +T+D+ A+ VL + + VHLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  123  TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  181  GPNAVEHSHYLRIYMGHLRQKL---EANPTQPNHLLTETGIGYR  221
            G     +   LR+ M+ LR+KL   +   T+ + ++T+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

326) BAA13334_I01419 in NC_016795


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

327) ctrA in NC_006932


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

328) BAbS19_I15100 in NC_010742


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

329) BCAN_A1634 in NC_010103


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

330) BCA52141_I2630 in NC_016778


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

331) BMEA_A1651 in NC_012441


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

332) ctrA in NC_007618


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

333) BMEI0423 in NC_003317


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

334) ctrA in NC_017244


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

335) BM590_A1589 in NC_017246


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

336) BMNI_I1538 in NC_017248


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

337) ctrA in NC_013119


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

338) ctrA in NC_009505


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

339) ctrA in NC_015857


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

340) ctrA in NC_017251


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

341) ctrA in NC_004310


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

342) BSUIS_A1654 in NC_010169


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

343) ctrA in NC_016797


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 132/202 (66%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGidlgklydydiilldlnlpdMSGYEV  62
            +L++EDD AI + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

344) Mesau_02104 in NC_019973


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 131/202 (65%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVdlgklydydiilldlnlpdMSGYEV  62
            +L++EDD A  + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELVARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVGGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

345) Mesci_2068 in NC_014923


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 131/202 (65%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVdlgklydydiilldlnlpdMSGYEV  62
            +L++EDD A  + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELVARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVGGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

346) mll2816 in NC_002678


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 131/202 (65%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVdlgklydydiilldlnlpdMSGYEV  62
            +L++EDD A  + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELVARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVGGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

347) Mesop_2183 in NC_015675


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 131/202 (65%), Gaps = 3/202 (1%)

Query  3    VLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVdlgklydydiilldlnlpdMSGYEV  62
            +L++EDD A  + I++ L  + ++V T+  G E+    +  + DIILLDL LPD+ G  +
Sbjct  5    LLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSL  64

Query  63   LRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELVARIHAIVR--RSK  120
            ++ +R   V TPI+++S+ +  +  V  L+ GA+DYMTKPF+ DEL ARI+  +R  RS 
Sbjct  65   IQQFR-DFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  121  GHAQSVITTGDLVVNLDAKTVEVGGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG  180
               QS +T G L +++DAK+V V  Q VHLT +E+Q+L +L  + G  LT +++L+ LYG
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183

Query  181  GMDEPELKIIDVFICKLRKKLD  202
             +++ E+  + V +  LRKKL+
Sbjct  184  YVNHTEMAALRVHMASLRKKLN  205

348) kdpE in NC_010162


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 92.0 bits (330),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 71/172 (42%), Positives = 110/172 (64%), Gaps = 13/172 (7%)

Query  67   VTRRLREWSAVPIIVLSARGQEQDKIDALDGGADDYLTKPFSAGEllarlrvalrhaasa  126
            + +++R+    PIIV+SAR +EQ  ++ LD GA+DY+TKPF+ +EL AR+RVALR + S+
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  127  argataEGHRFAVQDIEVDLARRVVLRAGEEVHLTPIEYKLLTTLIRHAGKVLTHRQLLG  186
                +    RF+   + +D+  + VL   + VHLTP E++LLT L +H GKVLT + LL 
Sbjct  124  ETIQS----RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  187  EVWGPAYAGQAHY--LRVYMAQLRHKL----ERDPARPLILITEPGVGYRLK  232
             + G  Y  +++   LRV MA LR KL    + +  + LI IT+P +GY+++
Sbjct  180  SLYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLI-ITHPRIGYQMQ  228

349) UMNK88_731 in NC_017641


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 89.4 bits (320),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 113/165 (69%), Gaps = 7/165 (4%)

Query  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGElqarlrvalrrqSAT  122
            +I+++R+    P+IV+SAR+EE   +  LD GA+DY++KPF I+EL+AR+RVALR   +T
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  123  TAPDPLVKFSD--VTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQV  180
             + ++  +F++  +T+D+ A+ +   E+ VHLTP EF+LL++L ++ GKVLT + LL+ +
Sbjct  124  ETIQS--RFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSL  181

Query  181  WGPNAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETGIGYR  222
             G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  182  YGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

350) Ndas_0299 in NC_014210


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 88.9 bits (318),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 70/172 (41%), Positives = 109/172 (64%), Gaps = 6/172 (3%)

Query  57   MEGMEVIQRLRGWSQVPIIVLSARHSAGEKVRCLDSGADDYVTKPFGMDellarmraaer  116
            ++G+ +IQ++R+  + PIIV+SAR      V  LD GA+DY+TKPF +DEL AR+R A R
Sbjct  59   IDGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALR  118

Query  117  rSVRVDEAPVVR--TPSFTVDLGAKRVLREGEEVRLTPTEWHILEILARHAGQLVSQRQL  174
             S R  E+   R    ++T+D++AK VL + + V+LTP E ++L IL +H G++++ + L
Sbjct  119  MS-RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVL  177

Query  175  LHDVWGPAYQSETNYLRVYMAQLRRKLE--PDPACPRYLITEAGR-GYRFER  223
            L  + G   ++E   LRV MA LR+KL+   DP   + LI    R GY+ ++
Sbjct  178  LKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQH  229

351) SARI_02239 in NC_010067


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 88.9 bits (318),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 111/164 (68%), Gaps = 3/164 (1%)

Query  62   DFIRDLRQWSAIPIIVLSARSEENDKIAALDAGADDYLSKPFGIGElqarlrvalrrhaa  121
             +I+++R+    PIIV+SAR+EE+  +  LD GA+DY++KPF I+EL+AR+RVALR   +
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRS  122

Query  122  SPCADPRVRFSNVTVDLAARLIHRGDEEIHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVW  181
            +   ++R   + +T+D+ A+ +   ++ +HLTP EF+LL++L ++ GKVLT + LL+ + 
Sbjct  123  TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  182  GPNAVEHSHYLRIYMGHLRQKLE--QDPTRPRHF-ITETGIGYR  222
            G     +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  183  GYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

352) kdpE in NC_013892


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 87.0 bits (311),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 66/163 (41%), Positives = 111/163 (69%), Gaps = 7/163 (4%)

Query  61   HDIRQWSSIPIIVLSARNNEQDKVAALDSGADDYLSKPFGINEllarvrvalrraTKANQ  120
            +++R+    PIIV+SAR +EQ  V  LD GA+DY++KPF I+EL AR+RVALR +  ++ 
Sbjct  66   QQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTET  125

Query  121  PDPMIHFADISVDLINRRVLKSQKELHLTPTEYRLLTELLTNSGKVLTQRYLLNHVWGPH  180
             ++ +  + +++D+  + VL +++ +HLTP E++LLT L  + GKVLT + LL+ + G  
Sbjct  126  IQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG--  183

Query  181  YIEHNHY--LRIYMGHLRQKLE--EDPARPKHL-LTETGVGYR  218
            Y++H +   LR+ M+ LR+KL+  +DP   K L +T+  +GY+
Sbjct  184  YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

353) Dd703_1126 in NC_012880


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 85.7 bits (306),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 67/162 (42%), Positives = 108/162 (67%), Gaps = 3/162 (1%)

Query  65   IRDLRQWSAIPIIVLSARTDEQDKIDALDAGAEDYLTKPFGIGEllarvrvalrraSTAP  124
            I+++R+    PIIV+SART+EQ  ++ LD GA+DY+TKPF I+EL AR+RVALR + ++ 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  125  QSSPLIVFSDVTVDLVNRQVSRADEAIHLTPIEFRLLATLLANPGKVLTQRQLLNQVWGP  184
               + +  + +T+D+  + V   ++++HLTP EF+LL+ L  + GKVLT + LL+ + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  185  NAVEHSHYLRIYMGHLRQKLE--QDPARPRHF-ITETAIGYR  223
                +   LR+ M+ LR+KL+  QDP   + + IT+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

354) SCE1572_09230 in NC_021658


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 85.5 bits (305),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 69/171 (41%), Positives = 110/171 (65%), Gaps = 11/171 (6%)

Query  67   VTRRLREWSAVPIIVLSARGQEQDKIDALDGGADDYLTKPFSagellarlrvalrhaaha  126
            + +++R+    PIIV+SAR +EQ  ++ LD GA+DY+TKPF+ +EL AR+RVALR +  +
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  127  argataesasFQVQDVEVDLARRVVLRAGEEIHLTPIEYKLLTTLIRHAGKVLTHRQLLG  186
                +     F    + +D+  + VL   + +HLTP E++LLT L +H GKVLT + LL 
Sbjct  124  ETIQSR----FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLK  179

Query  187  EVWGPAYAGQTHY--LRVYMAQLRHKLE--RDP-ARPQILITEPGVGYRLK  232
             + G  Y  +T+   LRV MA LR KL+  +DP +  +++IT+P +GY+++
Sbjct  180  SLYG--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQ  228

355) SerAS12_1217 in NC_015566


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 85.2 bits (304),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 108/164 (66%), Gaps = 7/164 (4%)

Query  68   IRDLRQWSAIPVIVLSARNAEEDKIAALDAGADDYLSKPFGIGEllarvrvalrrHSGSQ  127
            I+++R+    P+IV+SAR  E+  +  LD GA+DY++KPF I+EL AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  QESPLVSFSEITVDLINRRVLRNGEDLHLTPIEFRLLAELLANSGKVITQRQLLSHVWGP  187
               +  + + +T+D+  + VL N + +HLTP EF+LL+ L  + GKV+T + LL  + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG-  183

Query  188  NYVEHSHY--LRIYMGHLRQKLE--ADPARPKHL-LTETGVGYR  226
             YV+H++   LR+ M+ LR+KL+   DP   K L +T+  +GY+
Sbjct  184  -YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

356) SerAS13_1217 in NC_017573


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 85.2 bits (304),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 108/164 (66%), Gaps = 7/164 (4%)

Query  68   IRDLRQWSAIPVIVLSARNAEEDKIAALDAGADDYLSKPFGIGEllarvrvalrrHSGSQ  127
            I+++R+    P+IV+SAR  E+  +  LD GA+DY++KPF I+EL AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  QESPLVSFSEITVDLINRRVLRNGEDLHLTPIEFRLLAELLANSGKVITQRQLLSHVWGP  187
               +  + + +T+D+  + VL N + +HLTP EF+LL+ L  + GKV+T + LL  + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG-  183

Query  188  NYVEHSHY--LRIYMGHLRQKLE--ADPARPKHL-LTETGVGYR  226
             YV+H++   LR+ M+ LR+KL+   DP   K L +T+  +GY+
Sbjct  184  -YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

357) kdpE in NC_021591


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 85.2 bits (304),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 108/164 (66%), Gaps = 7/164 (4%)

Query  68   IRDLRQWSAIPVIVLSARNAEEDKIAALDAGADDYLSKPFGIGEllarvrvalrrHSGSQ  127
            I+++R+    P+IV+SAR  E+  +  LD GA+DY++KPF I+EL AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  QESPLVSFSEITVDLINRRVLRNGEDLHLTPIEFRLLAELLANSGKVITQRQLLSHVWGP  187
               +  + + +T+D+  + VL N + +HLTP EF+LL+ L  + GKV+T + LL  + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG-  183

Query  188  NYVEHSHY--LRIYMGHLRQKLE--ADPARPKHL-LTETGVGYR  226
             YV+H++   LR+ M+ LR+KL+   DP   K L +T+  +GY+
Sbjct  184  -YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

358) SerAS9_1217 in NC_015567


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 85.2 bits (304),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 108/164 (66%), Gaps = 7/164 (4%)

Query  68   IRDLRQWSAIPVIVLSARNAEEDKIAALDAGADDYLSKPFGIGEllarvrvalrrHSGSQ  127
            I+++R+    P+IV+SAR  E+  +  LD GA+DY++KPF I+EL AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  QESPLVSFSEITVDLINRRVLRNGEDLHLTPIEFRLLAELLANSGKVITQRQLLSHVWGP  187
               +  + + +T+D+  + VL N + +HLTP EF+LL+ L  + GKV+T + LL  + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG-  183

Query  188  NYVEHSHY--LRIYMGHLRQKLE--ADPARPKHL-LTETGVGYR  226
             YV+H++   LR+ M+ LR+KL+   DP   K L +T+  +GY+
Sbjct  184  -YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

359) M621_06260 in NC_021659


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 85.2 bits (304),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 66/164 (41%), Positives = 108/164 (66%), Gaps = 7/164 (4%)

Query  68   IRDLRQWSAIPVIVLSARNAEEDKIAALDAGADDYLSKPFGIGEllarvrvalrrHSGSQ  127
            I+++R+    P+IV+SAR  E+  +  LD GA+DY++KPF I+EL AR+RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  QESPLVSFSEITVDLINRRVLRNGEDLHLTPIEFRLLAELLANSGKVITQRQLLSHVWGP  187
               +  + + +T+D+  + VL N + +HLTP EF+LL+ L  + GKV+T + LL  + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG-  183

Query  188  NYVEHSHY--LRIYMGHLRQKLE--ADPARPKHL-LTETGVGYR  226
             YV+H++   LR+ M+ LR+KL+   DP   K L +T+  +GY+
Sbjct  184  -YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

360) Dd1591_2931 in NC_012912


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 84.7 bits (302),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 68/162 (42%), Positives = 108/162 (67%), Gaps = 3/162 (1%)

Query  68   IRDLRQWSTIPVIVLSARTDEQDKIDALDAGAEDYLTKPFGIGEllarsrvalrrvsasQ  127
            I+++R+    P+IV+SART+EQ  ++ LD GA+DY+TKPF I+EL AR RVALR   +++
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTE  124

Query  128  QETPLITFSNVTVDLINRQVLRNQQELHLTPIEFRLLSTLLANPGKVLTQRQLLNQVWGP  187
               + +T + +T+D+  + VL N+Q +HLTP EF+LL+ L  + GKVLT + LL+ + G 
Sbjct  125  TIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGY  184

Query  188  NAVEHSHYLRIYMGHLRQKLE--GDPARPRHF-LTETAIGYR  226
                +   LR+ M+ LR+KL+   DP   + + +T+  IGY+
Sbjct  185  VNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

361) Spro_1244 in NC_009832


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 83.9 bits (299),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 68/166 (41%), Positives = 109/166 (66%), Gaps = 11/166 (6%)

Query  68   IRDLRQWSAIPVIVLSARNAEEDKIAALDAGADDYLSKPFGIGEllarvrvalrrHSGSL  127
            I+++R+    P+IV+SAR  E+  +  LD GA+DY++KPF I+EL AR+RVALR   ++ 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST-  123

Query  128  QESPLVSFSE--ITVDLINRRVLRQGEDLHLTPIEFRLLAELLANSGKVLTQRQLLSHVW  185
             E+    F++  +T+D+  + VL + + +HLTP EF+LL+ L  + GKVLT + LL  + 
Sbjct  124  -ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  186  GPNYVEHSHY--LRIYMGHLRQKLE--ADPARPKHL-LTETGVGYR  226
            G  YV+H++   LR+ M+ LR+KL+   DP   K L +T+  +GY+
Sbjct  183  G--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

362) kdpE in NC_004547


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 83.6 bits (298),  Expect = 8e-18, Method: Compositional matrix adjust.
 Identities = 92/226 (41%), Positives = 145/226 (65%), Gaps = 3/226 (1%)

Query  1    MQATILIVEDEKEIRRFVRQALEGEGCRVFDAETMQRGLLEAATRKpdliildlglpdgs  60
            M++T+L+VED+  I +++  AL  +  +V  A T + + +   T +PD+I+LDLGLPD  
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   gidYIRDLRQWSSLPVIVLSARTDEQDKIGALDAGADDYLTKPFGIGEllarlrvalrrH  120
            G+  I+++R+    P+IV+SART+EQ  +  LD GA+DY+TKPF I+EL AR+RVALR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  SNTQQETPLVSFGTITVDLLNRQVNRDGQELHLTPIEFRLLATLLANPGKVLTQRQLLTQ  180
             +T+   +  + G +T+D+  + V  + Q +HLTP EF+LL+ L  + GKVLT + LL  
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  VWGPNAVEHSHYLRIYMGHLRQKLE--SDPARPRHL-LTETAIGYR  223
            + G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

363) PCC21_012450 in NC_018525


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 83.6 bits (298),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 92/226 (41%), Positives = 146/226 (65%), Gaps = 3/226 (1%)

Query  1    MQATILIVEDEKEIRRFVRQALEGEGCRVFDAETMQRGLLEAATRKpdliildlglpdgn  60
            M++T+L+VED+  I +++  AL  +  +V  A T + + +   T +PD+I+LDLGLPD +
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   gidYIRDLRQWSSLPVIVLSARTDEQDKIDALDAGADDYLTKPFGIGEllarlrvalrrH  120
            G+  I+++R+    P+IV+SART+EQ  ++ LD GA+DY+TKPF I+EL AR+RVALR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  SNTQQETPLVSFGNITVDLLNRQVNRDGQELHLTPIEFRLLATLLASPGKVLTQRQLLTQ  180
             +T+   +  + G +T+D+  + V  + Q +HLTP EF+LL+ L    GKVLT + LL  
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  VWGPNAVEHSHYLRIYMGHLRQKLE--SDPARPRHL-LTETAIGYR  223
            + G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

364) PC1_1214 in NC_012917


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 93/226 (42%), Positives = 145/226 (65%), Gaps = 3/226 (1%)

Query  1    MQATILIVEDEKEIRRFVRQALEGEGCRVFDAETMQRGLLEAATRKpdliildlglpdgd  60
            M++T+L+VED+  I +++  AL  +  +V  A T + + +   T +PD+I+LDLGLPD D
Sbjct  1    MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDID  60

Query  61   gidYIRDLRQWSSLPVIVLSARTDEQDKIDALDAGADDYLTKPFGIGEllarlrvalrrH  120
            G+  I+++R+    P+IV+SART+EQ  ++ LD GA+DY+TKPF I+EL AR+RVALR  
Sbjct  61   GLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS  120

Query  121  SHTQQETPLVSFGTITVDLLNRQVNRDGQELHLTPIEFRLLATLLASPGKVLTQRQLLTQ  180
              T+   +  + G +T+D+  + V  + Q +HLTP EF+LL+ L    GKVLT + LL  
Sbjct  121  RSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKS  180

Query  181  VWGPNAVEHSHYLRIYMGHLRQKLE--SDPARPRHL-LTETAIGYR  223
            + G     +   LR+ M+ LR+KL+   DP   + L +T+  IGY+
Sbjct  181  LYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

365) M495_05590 in NC_021741


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 82.6 bits (294),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 67/166 (41%), Positives = 109/166 (66%), Gaps = 11/166 (6%)

Query  68   IRDLRQWSAIPVIVLSARNAEEDKIAALDAGADDYLSKPFGIGEllarvrvalrrHSGSL  127
            I+++R+    P+IV+SAR  E+  +  LD GA+DY++KPF I+EL AR+RVALR   ++ 
Sbjct  65   IQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST-  123

Query  128  QESPLVSFSE--ITVDLINRRVLRQGEDLHLTPIEFRLLAELLANSGKVITQRQLLSHVW  185
             E+    F++  +T+D+  + VL + + +HLTP EF+LL+ L  + GKV+T + LL  + 
Sbjct  124  -ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  186  GPNYVEHSHY--LRIYMGHLRQKLE--ADPARPKHL-LTETGVGYR  226
            G  YV+H++   LR+ M+ LR+KL+   DP   K L +T+  +GY+
Sbjct  183  G--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

366) kdpE in NC_005126


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 82.1 bits (292),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 69/166 (42%), Positives = 105/166 (64%), Gaps = 7/166 (4%)

Query  67   NLIRDLRQWSAIPVIVLSARDKEADKVAALDVGADDYLSKPFGISEllarvrvalrrfar  126
            +LI+++R+    P+IV+SAR  E   V  LD GA+DY++KPF I EL AR+RVALR    
Sbjct  63   SLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRS  122

Query  127  TNREESIVHFSDVVVDLVNRRITKNDEELHLTPIEFRLLGELLANSGKVLTQRQLLNQVW  186
            T+  +S    + + +D+  + +  N++ +HLTP EF+LL  L  + GKVLT + LL+ + 
Sbjct  123  TETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLY  182

Query  187  GPNYVEHNHY--LRIYMGHLRQKLE--TDPTRPKHL-LTETGIGYR  227
            G  YV+H +   LR+ M+ LR+KL+   DP   K L +T+  IGY+
Sbjct  183  G--YVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQ  226

367) NT01EI_2892 in NC_012779


> NC_002976_R1|12|G12|57865946|YP_190033.1|Staphylococcus_epidermidis_RP62A|+|12890..13585|kdeP|SERP2490|DNA-binding 
response 
regulator KdeP
Length=231

 Score = 65.0 bits (227),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 74/180 (42%), Positives = 120/180 (67%), Gaps = 0/180 (0%)

Query  7    TILIVEDEQAIRRFVRAALENEGWRVTDADGLQRGLIEAATRQpdliildlglpdgdgME  66
            T+L+VED++AI +++  AL  +  +V  A   + + +   T QPD+I+LDLGLPD DG+ 
Sbjct  4    TLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLS  63

Query  67   FIRDLRRWSAIPVIVLSARCDEADKVETLDTGAEDFLSKPFGvaellarvrvalrrHTRQ  126
            +I+++R     P+IV+SAR +E   VE LD GA+D+++KPF + EL AR+RVALR     
Sbjct  64   LIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRST  123

Query  127  QQEIPQICFADVQVDLLARNVTRHGELLHLTPIEFRLLAELIANSGKVLTQRQLLSSVWG  186
            +   +++  + + +D+ A++V  + + +HLTP EF+LL+ L  + GKVLT + LL S+ G
Sbjct  124  ETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYG  183