Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
T3SS structure protein EscU |
NC_013364 (Escherichia coli 11128) |
3e-152 |
100 |
|
secretion system apparatus protein SsaU |
NC_011601 (Escherichia coli E2348/69) |
3e-152 |
100 |
|
secretion system apparatus protein SsaU |
NC_013941 (Escherichia coli CB9615) |
4e-152 |
99 |
|
secretion system apparatus protein SsaU |
NC_011353 (Escherichia coli EC4115) |
4e-152 |
99 |
|
secretion system apparatus protein SsaU |
NC_002655 (Escherichia coli EDL933) |
4e-152 |
99 |
|
secretion system apparatus protein SsaU |
NC_017656 (Escherichia coli RM12579) |
4e-152 |
99 |
|
secretion system apparatus protein SsaU |
NC_002695 (Escherichia coli Sakai) |
4e-152 |
99 |
|
secretion system apparatus protein SsaU |
NC_013008 (Escherichia coli TW14359) |
4e-152 |
99 |
|
secretion system apparatus protein SsaU |
NC_017906 (Escherichia coli Xuzhou21) |
4e-152 |
99 |
|
T3SS structural protein EscU |
NC_013716 (Citrobacter rodentium ICC168) |
6e-151 |
91 |
|
T3SS structure protein EscU |
NC_013353 (Escherichia coli 12009) |
6e-142 |
98 |
|
secretion system apparatus protein SsaU |
NC_013361 (Escherichia coli 11368) |
2e-141 |
98 |
|
secretion system apparatus protein SsaU |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
2e-70 |
42 |
|
type III secretion system EscU protein |
NC_014012 (Shewanella violacea DSS12) |
4e-68 |
43 |
|
type III secretion protein, YscU/HrpY family |
NC_017571 (Shewanella baltica BA175) |
1e-67 |
42 |
|
secretion system apparatus protein SsaU |
NC_009997 (Shewanella baltica OS195) |
1e-67 |
42 |
|
type III secretion protein, YscU/HrpY family |
NC_016901 (Shewanella baltica OS678) |
1e-67 |
42 |
|
type III secretion protein, YscU/HrpY family |
NC_017579 (Shewanella baltica OS117) |
2e-67 |
42 |
|
secretion system apparatus protein SsaU |
NC_009052 (Shewanella baltica OS155) |
2e-67 |
42 |
|
secretion system apparatus protein SsaU |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
1e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_006155 (Yersinia pseudotuberculosis IP 32953) |
1e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_010634 (Yersinia pseudotuberculosis PB1/+) |
1e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_010465 (Yersinia pseudotuberculosis YPIII) |
1e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_005810 (Yersinia pestis 91001) |
5e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_017168 (Yersinia pestis A1122) |
5e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_010159 (Yersinia pestis Angola) |
5e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_008150 (Yersinia pestis Antiqua) |
5e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_003143 (Yersinia pestis CO92) |
5e-62 |
42 |
|
putative type III secretion apparatus protein |
NC_017160 (Yersinia pestis D182038) |
5e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_004088 (Yersinia pestis KIM) |
5e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_008149 (Yersinia pestis Nepal516) |
5e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_009381 (Yersinia pestis Pestoides F) |
5e-62 |
42 |
|
putative type III secretion apparatus protein |
NC_014029 (Yersinia pestis Z176003) |
5e-62 |
42 |
|
secretion system apparatus protein SsaU |
NC_007712 (Sodalis glossinidius morsitans) |
1e-55 |
41 |
|
secretion system apparatus protein SsaU |
NC_020796 (Edwardsiella tarda C07-087) |
3e-51 |
41 |
|
type III secretion apparatus protein |
NC_013508 (Edwardsiella tarda EIB202) |
3e-51 |
41 |
|
protein EsaU |
NC_017309 (Edwardsiella tarda FL6-60) |
3e-51 |
41 |
|
secretion system apparatus protein SsaU |
NC_020307 (Salmonella enterica CFSAN001992) |
3e-51 |
41 |
|
secretion system apparatus protein SsaU |
NC_011094 (Salmonella enterica CVM19633) |
3e-51 |
41 |
|
secretion system apparatus protein SsaU |
NC_011274 (Salmonella enterica 287/91) |
6e-51 |
41 |
|
putative type III secretion protein |
NC_022221 (Salmonella enterica CDC1983-67) |
6e-51 |
41 |
|
secretion system apparatus protein SsaU |
NC_011294 (Salmonella enterica P125109) |
6e-51 |
41 |
|
putative type III secretion protein |
NC_016831 (Salmonella enterica RKS5078) |
6e-51 |
41 |
|
secretion system apparatus protein SsaU |
NC_021984 (Salmonella enterica S06004) |
6e-51 |
41 |
|
secretion system apparatus protein SsaU |
NC_011205 (Salmonella enterica CT_02021853) |
1e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_012125 (Salmonella enterica RKS4594) |
1e-50 |
41 |
|
secretion system apparatus protein SsaU |
NC_010067 (Salmonella enterica RSK2980) |
8e-51 |
41 |
|
secretion system apparatus protein SsaU |
NC_021818 (Salmonella enterica CFSAN002050) |
9e-51 |
41 |
|
type III secretion protein, YscU/HrpY family |
NC_012779 (Edwardsiella ictaluri 93-146) |
3e-48 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF022236' AND ph.id_pai_orf='12' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc