Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
pilus assembly protein |
NC_003198 (Salmonella enterica CT18) |
1e-58 |
100 |
|
pilus assembly protein |
NC_004631 (Salmonella enterica Ty2) |
1e-58 |
100 |
|
hypothetical protein |
NC_016832 (Salmonella enterica P-stx-12) |
9e-54 |
99 |
|
PilP |
NC_012125 (Salmonella enterica RKS4594) |
9e-54 |
99 |
|
putative conjugative transfer PilP protein |
NC_018659 (Escherichia coli 2011C-3493) |
2e-17 |
45 |
|
IncI1 conjugal transfer pilus assembly protein PilP |
NC_017642 (Escherichia coli UMNK88) |
2e-17 |
45 |
|
type IV pilus biogenesis protein PilP |
NC_016904 (Escherichia coli KO11FL) |
2e-17 |
45 |
|
Type IVB thin pilus protein |
NC_017637 (Escherichia coli W) |
2e-17 |
45 |
|
putative conjugative transfer PilP protein |
NC_017665 (Escherichia coli W) |
2e-17 |
45 |
|
pilus assembly protein PilP |
NC_011419 (Escherichia coli SE11) |
2e-17 |
44 |
|
hypothetical protein |
NC_005126 (Photorhabdus luminescens TTO1) |
3e-16 |
46 |
|
type IV pilus biogenesis protein PilP |
NC_021811 (Salmonella enterica 41578) |
3e-15 |
44 |
|
pilus biosynthesis protein PilP |
NC_021813 (Salmonella enterica CFSAN002069) |
3e-15 |
44 |
|
pilus protein |
NC_017718 (Salmonella enterica SL1344) |
3e-15 |
44 |
|
type IV pilus biogenesis protein PilP |
NC_017675 (Salmonella enterica ST4/74) |
3e-15 |
44 |
|
type IV pilus biogenesis protein PilP |
NC_011081 (Salmonella enterica SL476) |
3e-15 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF000001' AND ph.id_pai_orf='12' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc